Guide to the Human Genome
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Name: SLC26A9 Sequence: fasta or formatted (887aa) NCBI GI: 217272867
Description:

solute carrier family 26, member 9 isoform b

Referenced in:

Solute Carrier Families

Other entries for this name:
alt prot [791aa] solute carrier family 26, member 9 isoform a
alt prot [459aa] solute carrier family 26, member 9 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         74           2
 C cysteine            1.7         15           2
 D aspartate           4.1         36           2
 E glutamate           3.4         30           2
 F phenylalanine       5.9         52           2
 G glycine             6.7         59           2
 H histidine           1.9         17           1
 I isoleucine          6.0         53           2
 K lysine              5.4         48           2
 L leucine            10.5         93           2
 M methionine          2.9         26           1
 N asparagine          3.4         30           3
 P proline             5.6         50           2
 Q glutamine           4.6         41           2
 R arginine            3.2         28           2
 S serine              8.9         79           3
 T threonine           4.8         43           1
 V valine              8.2         73           4
 W tryptophan          0.6          5           1
 Y tyrosine            3.9         35           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 26, member 9 isoform b 
SLC26A9               0.891   solute carrier family 26, member 9 isoform a 
SLC26A9               0.513   solute carrier family 26, member 9 isoform c 
SLC26A6               0.277   solute carrier family 26, member 6 isoform 4 
SLC26A6               0.277   solute carrier family 26, member 6 isoform 1 
SLC26A6               0.275   solute carrier family 26, member 6 isoform 2 
SLC26A6               0.271   solute carrier family 26, member 6 isoform 3 
SLC26A5               0.270   prestin isoform a 
SLC26A5               0.255   prestin isoform b 
SLC26A4               0.251   pendrin 
SLC26A3               0.239   solute carrier family 26, member 3 
SLC26A5               0.210   prestin isoform c 
SLC26A2               0.192   solute carrier family 26 member 2 
SLC26A8               0.163   solute carrier family 26, member 8 isoform a 
SLC26A1               0.160   solute carrier family 26, member 1 isoform a 
SLC26A1               0.160   solute carrier family 26, member 1 isoform a 
SLC26A7               0.146   solute carrier family 26, member 7 isoform a 
SLC26A7               0.146   solute carrier family 26, member 7 isoform b 
SLC26A5               0.126   prestin isoform d 
SLC26A10              0.117   solute carrier family 26, member 10 
SLC26A8               0.089   solute carrier family 26, member 8 isoform b 
SLC26A11              0.063   solute carrier family 26, member 11 
SLC26A1               0.032   solute carrier family 26, member 1 isoform b 
CREBBP                0.006   CREB binding protein isoform b 
CREBBP                0.006   CREB binding protein isoform a 
MAST3                 0.005   microtubule associated serine/threonine kinase 3 [H...
OR5AS1                0.005   olfactory receptor, family 5, subfamily AS, member 1...
MIA3                  0.005   melanoma inhibitory activity family, member 3 [Homo...
POU6F2                0.005   POU domain, class 6, transcription factor 2 
TIMD4                 0.005   T-cell immunoglobulin and mucin domain containing 4...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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