Guide to the Human Genome
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Name: SLC26A11 Sequence: fasta or formatted (606aa) NCBI GI: 85540447
Description:

solute carrier family 26, member 11

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.4         63           3
 C cysteine            2.0         12           3
 D aspartate           2.5         15           1
 E glutamate           4.0         24           2
 F phenylalanine       5.3         32           2
 G glycine             7.6         46           2
 H histidine           1.0          6           1
 I isoleucine          4.1         25           2
 K lysine              2.3         14           1
 L leucine            16.0         97           4
 M methionine          2.6         16           1
 N asparagine          1.7         10           2
 P proline             6.4         39           2
 Q glutamine           4.0         24           1
 R arginine            4.3         26           2
 S serine              6.9         42           2
 T threonine           5.4         33           2
 V valine              9.4         57           2
 W tryptophan          0.8          5           1
 Y tyrosine            3.3         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 26, member 11 
SLC26A6               0.173   solute carrier family 26, member 6 isoform 4 
SLC26A6               0.173   solute carrier family 26, member 6 isoform 3 
SLC26A6               0.173   solute carrier family 26, member 6 isoform 2 
SLC26A6               0.173   solute carrier family 26, member 6 isoform 1 
SLC26A5               0.139   prestin isoform b 
SLC26A5               0.139   prestin isoform a 
SLC26A5               0.135   prestin isoform c 
SLC26A2               0.135   solute carrier family 26 member 2 
SLC26A4               0.131   pendrin 
SLC26A1               0.130   solute carrier family 26, member 1 isoform a 
SLC26A1               0.130   solute carrier family 26, member 1 isoform a 
SLC26A3               0.128   solute carrier family 26, member 3 
SLC26A7               0.113   solute carrier family 26, member 7 isoform a 
SLC26A7               0.113   solute carrier family 26, member 7 isoform b 
SLC26A9               0.094   solute carrier family 26, member 9 isoform a 
SLC26A9               0.094   solute carrier family 26, member 9 isoform b 
SLC26A10              0.092   solute carrier family 26, member 10 
SLC26A8               0.087   solute carrier family 26, member 8 isoform a 
SLC26A5               0.073   prestin isoform d 
SLC26A1               0.042   solute carrier family 26, member 1 isoform b 
SLC26A8               0.039   solute carrier family 26, member 8 isoform b 
SLC26A9               0.033   solute carrier family 26, member 9 isoform c 
GLYCTK                0.006   glycerate kinase isoform 1 
FBXO17                0.006   F-box protein FBG4 isoform 1 
FBXO17                0.006   F-box protein FBG4 isoform 2 
DPM2                  0.005   dolichyl-phosphate mannosyltransferase 2 
SSTR4                 0.004   somatostatin receptor 4 
ATP13A4               0.004   ATPase type 13A4 
CACNG6                0.004   voltage-dependent calcium channel gamma-6 subunit is...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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