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Search of human proteins with 21703710
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21703710 scotin [Homo sapiens]
(240 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21703710 scotin [Homo sapiens] 518 e-147
gi|239752299 PREDICTED: hypothetical protein [Homo sapiens] 114 1e-25
gi|239757780 PREDICTED: hypothetical protein [Homo sapiens] 103 1e-22
gi|239746810 PREDICTED: hypothetical protein [Homo sapiens] 103 1e-22
gi|39930575 shisa homolog 4 [Homo sapiens] 80 2e-15
gi|57165375 glutamate receptor, ionotropic, N-methyl D-aspartate... 54 9e-08
gi|57165373 glutamate receptor, ionotropic, N-methyl D-aspartate... 54 9e-08
gi|57863314 vacuolar protein sorting 37C [Homo sapiens] 49 5e-06
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 48 9e-06
gi|210032580 SET domain containing 1B [Homo sapiens] 47 1e-05
gi|40807465 zinc finger protein 341 [Homo sapiens] 47 1e-05
gi|50345997 E1A binding protein p300 [Homo sapiens] 46 3e-05
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 46 3e-05
gi|169168212 PREDICTED: hypothetical protein LOC100129566 [Homo ... 45 4e-05
gi|241982780 programmed cell death 6 interacting protein isoform... 45 6e-05
gi|22027538 programmed cell death 6 interacting protein isoform ... 45 6e-05
gi|52485606 formin-like 2 [Homo sapiens] 45 6e-05
gi|42544130 splicing factor 1 isoform 1 [Homo sapiens] 45 6e-05
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 45 6e-05
gi|157168329 formin 1 [Homo sapiens] 44 1e-04
gi|11386183 WAS protein family, member 2 [Homo sapiens] 44 1e-04
gi|153792074 proline rich 12 [Homo sapiens] 44 1e-04
gi|169167975 PREDICTED: hypothetical protein LOC100129566 [Homo ... 44 1e-04
gi|169167690 PREDICTED: hypothetical protein LOC100129566 [Homo ... 44 1e-04
gi|110832843 TBP-associated factor 4 [Homo sapiens] 44 1e-04
gi|130492454 zinc finger RNA binding protein 2 isoform 1 [Homo s... 44 1e-04
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 44 2e-04
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 44 2e-04
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 44 2e-04
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 44 2e-04
>gi|21703710 scotin [Homo sapiens]
Length = 240
Score = 518 bits (1333), Expect = e-147
Identities = 240/240 (100%), Positives = 240/240 (100%)
Query: 1 MTAPVPAPRILLPLLLLLLLTPPPGARGEVCMASRGLSLFPESCPDFCCGTCDDQYCCSD 60
MTAPVPAPRILLPLLLLLLLTPPPGARGEVCMASRGLSLFPESCPDFCCGTCDDQYCCSD
Sbjct: 1 MTAPVPAPRILLPLLLLLLLTPPPGARGEVCMASRGLSLFPESCPDFCCGTCDDQYCCSD 60
Query: 61 VLKKFVWSEERCAVPEASVPASVEPVEQLGSALRFRPGYNDPMSGFGATLAVGLTIFVLS 120
VLKKFVWSEERCAVPEASVPASVEPVEQLGSALRFRPGYNDPMSGFGATLAVGLTIFVLS
Sbjct: 61 VLKKFVWSEERCAVPEASVPASVEPVEQLGSALRFRPGYNDPMSGFGATLAVGLTIFVLS 120
Query: 121 VVTIIICFTCSCCCLYKTCRRPRPVVTTTTSTTVVHAPYPQPPSVPPSYPGPSYQGYHTM 180
VVTIIICFTCSCCCLYKTCRRPRPVVTTTTSTTVVHAPYPQPPSVPPSYPGPSYQGYHTM
Sbjct: 121 VVTIIICFTCSCCCLYKTCRRPRPVVTTTTSTTVVHAPYPQPPSVPPSYPGPSYQGYHTM 180
Query: 181 PPQPGMPAAPYPMQYPPPYPAQPMGPPAYHETLAGGAAAPYPASQPPYNPAYMDAPKAAL 240
PPQPGMPAAPYPMQYPPPYPAQPMGPPAYHETLAGGAAAPYPASQPPYNPAYMDAPKAAL
Sbjct: 181 PPQPGMPAAPYPMQYPPPYPAQPMGPPAYHETLAGGAAAPYPASQPPYNPAYMDAPKAAL 240
>gi|239752299 PREDICTED: hypothetical protein [Homo sapiens]
Length = 61
Score = 114 bits (284), Expect = 1e-25
Identities = 50/60 (83%), Positives = 52/60 (86%)
Query: 180 MPPQPGMPAAPYPMQYPPPYPAQPMGPPAYHETLAGGAAAPYPASQPPYNPAYMDAPKAA 239
MPP+PGMPAA YP+QYP PYPAQP GPPAY ETLAGGAA PYP SQPP NP YMDAPKAA
Sbjct: 1 MPPKPGMPAASYPVQYPSPYPAQPXGPPAYFETLAGGAATPYPTSQPPSNPDYMDAPKAA 60
>gi|239757780 PREDICTED: hypothetical protein [Homo sapiens]
Length = 55
Score = 103 bits (257), Expect = 1e-22
Identities = 46/54 (85%), Positives = 47/54 (87%)
Query: 186 MPAAPYPMQYPPPYPAQPMGPPAYHETLAGGAAAPYPASQPPYNPAYMDAPKAA 239
MPAA YP+QYP PYPAQPMGPPAY ETLAGGAA PYP SQPP NP YMDAPKAA
Sbjct: 1 MPAASYPVQYPSPYPAQPMGPPAYFETLAGGAATPYPTSQPPSNPDYMDAPKAA 54
>gi|239746810 PREDICTED: hypothetical protein [Homo sapiens]
Length = 55
Score = 103 bits (257), Expect = 1e-22
Identities = 46/54 (85%), Positives = 47/54 (87%)
Query: 186 MPAAPYPMQYPPPYPAQPMGPPAYHETLAGGAAAPYPASQPPYNPAYMDAPKAA 239
MPAA YP+QYP PYPAQPMGPPAY ETLAGGAA PYP SQPP NP YMDAPKAA
Sbjct: 1 MPAASYPVQYPSPYPAQPMGPPAYFETLAGGAATPYPTSQPPSNPDYMDAPKAA 54
>gi|39930575 shisa homolog 4 [Homo sapiens]
Length = 197
Score = 80.1 bits (196), Expect = 2e-15
Identities = 71/233 (30%), Positives = 92/233 (39%), Gaps = 53/233 (22%)
Query: 12 LPLLLLLLLTPPPGARGEVCM--ASRGLSLFPE-SCP--DFCCGTCDDQYCCSDVLKKFV 66
L + LL+L P GE C+ R S P +C FCCGTC +YCC D+
Sbjct: 12 LTAIALLVLGAPLVLAGEDCLWYLDRNGSWHPGFNCEFFTFCCGTCYHRYCCRDLTLLIT 71
Query: 67 WSEERCAVPEASVPASVEPVEQLGSALRFRPGYNDPMSGFGATLAVGLTIFVLSVVTIII 126
+++ + A P ++ A +A + +FV V T I
Sbjct: 72 ERQQKHCL--AFSPKTI------------------------AGIASAVILFVAVVATTIC 105
Query: 127 CFTCSCCCLYKTCRRPRPVVTTTTSTTVVHAPYPQPPSVPPSYPGPSYQGYHTMPPQPGM 186
CF CSCC LY RR + + + + P V P YP P PPQPG
Sbjct: 106 CFLCSCCYLY---RRRQQLQSPFEGQEIPMTGIP----VQPVYPYPQDPKAGPAPPQPGF 158
Query: 187 PAAPYPMQYP-PPYPAQPMGPPAYHETLAGGAAAPYPASQPPYNPAYMDAPKA 238
YP P P YP P GPP Y+ PA+ PPY P P A
Sbjct: 159 ---MYPPSGPAPQYPLYPAGPPVYN-----------PAAPPPYMPPQPSYPGA 197
>gi|57165375 glutamate receptor, ionotropic, N-methyl
D-aspartate-associated protein 1 [Homo sapiens]
Length = 371
Score = 54.3 bits (129), Expect = 9e-08
Identities = 37/93 (39%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Query: 142 PRPVVTTTTSTTVVHAPYPQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPM-QYPP-PY 199
P+P + APYPQPP P Y P Y + PQ G P PYP YP PY
Sbjct: 25 PQPPMPPYAQPPYPGAPYPQPPFQPSPYGQPGYPHGPSPYPQGGYPQGPYPQGGYPQGPY 84
Query: 200 PAQ--PMGPPAYHETLAGGAAAPYPASQPPYNP 230
P + P GP Y + G PYP S P NP
Sbjct: 85 PQEGYPQGP--YPQ--GGYPQGPYPQSPFPPNP 113
Score = 39.3 bits (90), Expect = 0.003
Identities = 32/80 (40%), Positives = 33/80 (41%), Gaps = 18/80 (22%)
Query: 159 YPQPPSVPPSYPGPSYQGYHTMPP--QPGMPAAPYPMQYPP----PY--PAQPMGPPAYH 210
YP P P YPG MPP QP P APYP PP PY P P GP Y
Sbjct: 14 YPPPN---PGYPGGPQP---PMPPYAQPPYPGAPYPQ--PPFQPSPYGQPGYPHGPSPYP 65
Query: 211 ETLAGGAAAPYPASQPPYNP 230
+ G PYP P P
Sbjct: 66 Q--GGYPQGPYPQGGYPQGP 83
Score = 36.6 bits (83), Expect = 0.020
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 12/65 (18%)
Query: 159 YPQPPSVPPSYP-GPSYQGYHTMPPQPGMPAAPYPMQYPPPYPA-----------QPMGP 206
YPQ P YP GP QG + P P P P P P +P Q GP
Sbjct: 79 YPQGPYPQEGYPQGPYPQGGYPQGPYPQSPFPPNPYGQPQVFPGQDPDSPQHGNYQEEGP 138
Query: 207 PAYHE 211
P+Y++
Sbjct: 139 PSYYD 143
Score = 33.9 bits (76), Expect = 0.13
Identities = 21/48 (43%), Positives = 22/48 (45%), Gaps = 6/48 (12%)
Query: 195 YPPPYPAQPMGP----PAYHETLAGGAAAPYPASQP-PY-NPAYMDAP 236
YPPP P P GP P Y + GA P P QP PY P Y P
Sbjct: 14 YPPPNPGYPGGPQPPMPPYAQPPYPGAPYPQPPFQPSPYGQPGYPHGP 61
>gi|57165373 glutamate receptor, ionotropic, N-methyl
D-aspartate-associated protein 1 [Homo sapiens]
Length = 371
Score = 54.3 bits (129), Expect = 9e-08
Identities = 37/93 (39%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Query: 142 PRPVVTTTTSTTVVHAPYPQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPM-QYPP-PY 199
P+P + APYPQPP P Y P Y + PQ G P PYP YP PY
Sbjct: 25 PQPPMPPYAQPPYPGAPYPQPPFQPSPYGQPGYPHGPSPYPQGGYPQGPYPQGGYPQGPY 84
Query: 200 PAQ--PMGPPAYHETLAGGAAAPYPASQPPYNP 230
P + P GP Y + G PYP S P NP
Sbjct: 85 PQEGYPQGP--YPQ--GGYPQGPYPQSPFPPNP 113
Score = 39.3 bits (90), Expect = 0.003
Identities = 32/80 (40%), Positives = 33/80 (41%), Gaps = 18/80 (22%)
Query: 159 YPQPPSVPPSYPGPSYQGYHTMPP--QPGMPAAPYPMQYPP----PY--PAQPMGPPAYH 210
YP P P YPG MPP QP P APYP PP PY P P GP Y
Sbjct: 14 YPPPN---PGYPGGPQP---PMPPYAQPPYPGAPYPQ--PPFQPSPYGQPGYPHGPSPYP 65
Query: 211 ETLAGGAAAPYPASQPPYNP 230
+ G PYP P P
Sbjct: 66 Q--GGYPQGPYPQGGYPQGP 83
Score = 36.6 bits (83), Expect = 0.020
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 12/65 (18%)
Query: 159 YPQPPSVPPSYP-GPSYQGYHTMPPQPGMPAAPYPMQYPPPYPA-----------QPMGP 206
YPQ P YP GP QG + P P P P P P +P Q GP
Sbjct: 79 YPQGPYPQEGYPQGPYPQGGYPQGPYPQSPFPPNPYGQPQVFPGQDPDSPQHGNYQEEGP 138
Query: 207 PAYHE 211
P+Y++
Sbjct: 139 PSYYD 143
Score = 33.9 bits (76), Expect = 0.13
Identities = 21/48 (43%), Positives = 22/48 (45%), Gaps = 6/48 (12%)
Query: 195 YPPPYPAQPMGP----PAYHETLAGGAAAPYPASQP-PY-NPAYMDAP 236
YPPP P P GP P Y + GA P P QP PY P Y P
Sbjct: 14 YPPPNPGYPGGPQPPMPPYAQPPYPGAPYPQPPFQPSPYGQPGYPHGP 61
>gi|57863314 vacuolar protein sorting 37C [Homo sapiens]
Length = 355
Score = 48.5 bits (114), Expect = 5e-06
Identities = 35/107 (32%), Positives = 43/107 (40%), Gaps = 8/107 (7%)
Query: 140 RRPRPVVTTTTSTTVVHAPYPQPPSVPPSYPGPSYQGYHTMPPQP----GMPAAPYPMQY 195
R P PV T V PQPP P YP P Y ++P P +P AP+P+
Sbjct: 174 RPPPPVRPVPQGTPPVVEEQPQPPLAMPPYPLP-YSPSPSLPVGPTAHGALPPAPFPVVS 232
Query: 196 PPPYPAQPMGPPAYHETLAGGAAAPY---PASQPPYNPAYMDAPKAA 239
P + + P+GP L AA Y P P P Y P A
Sbjct: 233 QPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGA 279
Score = 40.8 bits (94), Expect = 0.001
Identities = 35/116 (30%), Positives = 41/116 (35%), Gaps = 33/116 (28%)
Query: 142 PRPVVTTTTSTTVVHAP-YPQPPSVPPSYPGPSYQGYHTMPPQPGMPAAP---------- 190
P PVV+ + + P YP P G S+ +MPP+PG P P
Sbjct: 227 PFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGASGPGYPL 286
Query: 191 ---------YPMQYP-------PPYPAQPMGPPAYHETLAGGAAAPYPASQPPYNP 230
YP Q P PPYP QP P G P QPPY P
Sbjct: 287 RGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPS------FPGQPQPSVPLQPPYPP 336
Score = 39.3 bits (90), Expect = 0.003
Identities = 21/46 (45%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 158 PYPQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQYPPPYPAQP 203
PYP P +P S+PG PP P PA PY PPP PA P
Sbjct: 310 PYPIQPQLP-SFPGQPQPSVPLQPPYPPGPAPPYGFP-PPPGPAWP 353
Score = 37.0 bits (84), Expect = 0.015
Identities = 29/86 (33%), Positives = 31/86 (36%), Gaps = 12/86 (13%)
Query: 158 PYPQPPSVPPSYPGPSYQGYHTMPPQPGMPA-APYPMQY-PPPYPAQPMGPP-------- 207
P P P P GP Y P PG P +PYP PPYP QP P
Sbjct: 268 PRPGYPGTPMGASGPGYPLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFPGQPQPS 327
Query: 208 -AYHETLAGGAAAPYPASQPPYNPAY 232
G A PY PP PA+
Sbjct: 328 VPLQPPYPPGPAPPYGFPPPP-GPAW 352
Score = 30.4 bits (67), Expect = 1.4
Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 12/51 (23%)
Query: 181 PPQPGMPAAPYPMQYPPPYPAQPMGPPAYHETLAGGAAAPYPASQPPYNPA 231
PP+P P P P PP QP P A PYP PY+P+
Sbjct: 172 PPRPPPPVRPVPQGTPPVVEEQPQPPL---------AMPPYPL---PYSPS 210
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 47.8 bits (112), Expect = 9e-06
Identities = 26/73 (35%), Positives = 30/73 (41%), Gaps = 5/73 (6%)
Query: 160 PQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPM-----QYPPPYPAQPMGPPAYHETLA 214
P PP P P H PP PG P P P Q PPP+P +P GPP +
Sbjct: 114 PPPPGKPERPPPQGGNQSHRPPPPPGKPERPPPQGGNQSQGPPPHPGKPEGPPPQEGNKS 173
Query: 215 GGAAAPYPASQPP 227
A +P Q P
Sbjct: 174 RSARSPPGKPQGP 186
Score = 41.2 bits (95), Expect = 8e-04
Identities = 29/79 (36%), Positives = 33/79 (41%), Gaps = 11/79 (13%)
Query: 160 PQPPSVPPSYP-GPSYQGYHTM---PPQPGMPAAPYPM-----QYPPPYPAQPMGPPAYH 210
PQ P PP P GP QG + PP PG P P Q PPP+P +P PP
Sbjct: 47 PQRPPPPPGKPQGPPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQGPPPHPGKPERPPPQG 106
Query: 211 ETLAGGAAAP--YPASQPP 227
+ G P P PP
Sbjct: 107 GNQSQGTPPPPGKPERPPP 125
Score = 33.5 bits (75), Expect = 0.17
Identities = 30/99 (30%), Positives = 32/99 (32%), Gaps = 37/99 (37%)
Query: 156 HAPYPQP--PSVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQ------------------- 194
H P P P P PP G QG PP PG P P P +
Sbjct: 132 HRPPPPPGKPERPPPQGGNQSQG---PPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQ 188
Query: 195 ------YPPPYPAQPMGPPAYHETLAGGAAAPYPASQPP 227
PP P +P GPP AGG P PP
Sbjct: 189 QEGNKPQGPPPPGKPQGPPP-----AGG--NPQQPQAPP 220
Score = 33.5 bits (75), Expect = 0.17
Identities = 26/77 (33%), Positives = 27/77 (35%), Gaps = 11/77 (14%)
Query: 160 PQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQYPPPYPAQPMGPPAYHETLAGGAAA 219
P P PP G QG PP PG P Q PPP P P A G
Sbjct: 180 PGKPQGPPQQEGNKPQG----PPPPGKP------QGPPPAGGNPQQPQAPPAGKPQGPPP 229
Query: 220 PYPASQPPYNPAYMDAP 236
P +PP PA P
Sbjct: 230 PPQGGRPP-RPAQGQQP 245
Score = 30.0 bits (66), Expect = 1.9
Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Query: 182 PQPGMPAAPYPMQYPPPYPAQPMGPPAYHETLAGGAAAP--YPASQPP 227
P+ P Q PPP P +P GPP + G P P +PP
Sbjct: 36 PEGRRPQGGNQPQRPPPPPGKPQGPPPQGGNQSQGPPPPPGKPEGRPP 83
Score = 29.3 bits (64), Expect = 3.2
Identities = 21/55 (38%), Positives = 22/55 (40%), Gaps = 9/55 (16%)
Query: 160 PQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQYPPP-------YPAQPMGPP 207
PQ P P GP G + P QP P A P PPP PAQ PP
Sbjct: 194 PQGPPPPGKPQGPPPAGGN--PQQPQAPPAGKPQGPPPPPQGGRPPRPAQGQQPP 246
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 47.4 bits (111), Expect = 1e-05
Identities = 32/93 (34%), Positives = 37/93 (39%), Gaps = 18/93 (19%)
Query: 142 PRPVVTTTTSTTVVHA-------PYPQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQ 194
P+P+V T + V P P PP PP P P PPQPG P P P+
Sbjct: 657 PKPMVVTPGAAAVAAPSVLAPTLPLPPPPGFPPLPPPPP-----PPPPQPGFPMPP-PLP 710
Query: 195 YPPPYPAQPMGPPAYHETLAGGAAAPYPASQPP 227
PPP P PPA+ P P PP
Sbjct: 711 PPPPPP-----PPAHPAVTVPPPPLPAPPGVPP 738
Score = 35.0 bits (79), Expect = 0.058
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 12/82 (14%)
Query: 160 PQPPSV-----PPSYPGPSYQGYHTMPPQPGMPAAPYPMQ--YPPPYPAQPMGPPAYHET 212
P+PP+ PP P + + + P+P M P P+Q PPP P +P PP ET
Sbjct: 1241 PEPPAKEVEARPPLSPERAPEHDLEVEPEPPM-MLPLPLQPPLPPPRPPRPPSPPPEPET 1299
Query: 213 LAGG--AAAPYPASQ--PPYNP 230
+ P P ++ PP+ P
Sbjct: 1300 TDASHPSVPPEPLAEDHPPHTP 1321
Score = 32.3 bits (72), Expect = 0.38
Identities = 27/85 (31%), Positives = 35/85 (41%), Gaps = 12/85 (14%)
Query: 164 SVPP--SYPGPSYQGYHTMPPQPGMPA-------APY--PMQYPPPYPAQPMGPPAYHET 212
S PP + P S HT PP PA +PY P+ + PP P +P A+
Sbjct: 364 SGPPFKAQPQDSATFAHTPPPAQATPAPGFKSAFSPYQTPVAHFPPPPEEPTATAAFGAR 423
Query: 213 LAGG-AAAPYPASQPPYNPAYMDAP 236
+G AP P PP P + P
Sbjct: 424 DSGEFRRAPAPPPLPPAEPLAKEKP 448
Score = 32.3 bits (72), Expect = 0.38
Identities = 27/98 (27%), Positives = 36/98 (36%), Gaps = 21/98 (21%)
Query: 160 PQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQYPP----------------PYPAQP 203
P PP PP P P + T P +P P +PP PA P
Sbjct: 1281 PLPPPRPPRPPSPPPEPETTDASHPSVPPEPLAEDHPPHTPGLCGSLAKSQSTETVPATP 1340
Query: 204 MGPPAYHETLAGGAAA-PYPASQPPYNPAYMDAPKAAL 240
G P L+GG++ + Q P +P AP +L
Sbjct: 1341 GGEP----PLSGGSSGLSLSSPQVPGSPFSYPAPSPSL 1374
Score = 31.6 bits (70), Expect = 0.64
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 158 PYPQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQYPPPYPAQPMGPP 207
P P P PP P P++ T+PP P +PA P + PP P P PP
Sbjct: 704 PMPPPLPPPPPPPPPAHPAV-TVPPPP-LPAPP-GVPPPPILPPLPPFPP 750
Score = 27.7 bits (60), Expect = 9.2
Identities = 17/59 (28%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Query: 182 PQPGMPAAPYPMQYPPPYPAQPMGPP--AYHETLAGGAAAPYPASQPPYNPAYMDAPKA 238
P P P P P PPP P +P P A P P + YM+ K+
Sbjct: 1537 PAPPPPLPPQPPPPPPPPPVEPTKLPFKELDNQWPSEAIPPGPRGRDEVTEEYMELAKS 1595
>gi|40807465 zinc finger protein 341 [Homo sapiens]
Length = 847
Score = 47.0 bits (110), Expect = 1e-05
Identities = 29/86 (33%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Query: 145 VVTTTTSTTVVHAPYPQ-PPSVPPS---YPGPSYQGYHTMPPQPGMPAAPYPMQYPPPYP 200
+++ ++ T + P PQ PP V S + PSY PP P P P P PPP P
Sbjct: 141 LMSAMSAFTSLDQPMPQGPPPVQSSLNMHSVPSYLTQPPPPPPPPPPLPPPPPPQPPPPP 200
Query: 201 AQPMGPPAYHETLAGGAAAPYPASQP 226
Q +GPP G Y A+ P
Sbjct: 201 PQSLGPPGRPNPGGNGVVEVYSAAAP 226
>gi|50345997 E1A binding protein p300 [Homo sapiens]
Length = 2414
Score = 46.2 bits (108), Expect = 3e-05
Identities = 29/94 (30%), Positives = 37/94 (39%), Gaps = 9/94 (9%)
Query: 153 TVVHAPYPQPPSVPPSYPGPSYQGYHTMPPQ-PGMPAAPYPMQYPPPYPA-----QPMGP 206
T + AP P PP++P PGP Q H P Q P P P Q P PA QP
Sbjct: 857 TTIPAPVPTPPAMP---PGPQSQALHPPPRQTPTPPTTQLPQQVQPSLPAAPSADQPQQQ 913
Query: 207 PAYHETLAGGAAAPYPASQPPYNPAYMDAPKAAL 240
P ++ A P PP + P ++
Sbjct: 914 PRSQQSTAASVPTPTAPLLPPQPATPLSQPAVSI 947
Score = 30.8 bits (68), Expect = 1.1
Identities = 20/61 (32%), Positives = 23/61 (37%), Gaps = 13/61 (21%)
Query: 158 PYPQPPSVPPSYPG------PSYQGYHTMPP-------QPGMPAAPYPMQYPPPYPAQPM 204
P P P +P PG P QG H+ P Q G+ A P Q P PM
Sbjct: 2099 PIPGQPGMPQGQPGLQPPTMPGQQGVHSNPAMQNMNPMQAGVQRAGLPQQQPQQQLQPPM 2158
Query: 205 G 205
G
Sbjct: 2159 G 2159
Score = 28.9 bits (63), Expect = 4.2
Identities = 22/71 (30%), Positives = 24/71 (33%), Gaps = 4/71 (5%)
Query: 160 PQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQYPPPY-PAQPMGPPAYHETLAGGAA 218
P P P+ P Q PQP P P PPY P P AG
Sbjct: 1848 PSPTPATPTTP-TGQQPTTPQTPQPTSQPQPTPPNSMPPYLPRTQAAGPVSQGKAAGQVT 1906
Query: 219 APYP--ASQPP 227
P P +QPP
Sbjct: 1907 PPTPPQTAQPP 1917
Score = 28.1 bits (61), Expect = 7.1
Identities = 19/57 (33%), Positives = 21/57 (36%), Gaps = 4/57 (7%)
Query: 183 QPGMPAAPYPMQYPPPYPAQPMGPPAYHETLAGGAAAPYPAS---QPPYNPAYMDAP 236
QP P P P P P P M PP T A G + A+ PP P P
Sbjct: 1862 QPTTPQTPQPTSQPQPTPPNSM-PPYLPRTQAAGPVSQGKAAGQVTPPTPPQTAQPP 1917
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 46.2 bits (108), Expect = 3e-05
Identities = 30/85 (35%), Positives = 35/85 (41%), Gaps = 11/85 (12%)
Query: 158 PYPQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPM-----QYPPPYPAQPMGPPAYHET 212
P+P P PP G QG PP+PG P P P Q PPP P +P GPP+
Sbjct: 178 PHPGKPEGPPPQGGNQSQG---PPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGN 234
Query: 213 LAGGAAAPYPASQPPYNPAYMDAPK 237
G P P P P + K
Sbjct: 235 KPQG---PPPHPGKPQGPPPQEGNK 256
Score = 45.8 bits (107), Expect = 3e-05
Identities = 28/74 (37%), Positives = 33/74 (44%), Gaps = 13/74 (17%)
Query: 158 PYPQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPM-----QYPPPYPAQPMGPPAYHET 212
P P P PP G QG PP+PG P P P Q PPP+P +P GPP
Sbjct: 136 PRPGKPEGPPPQGGNQSQG---PPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPP---- 188
Query: 213 LAGGAAAPYPASQP 226
GG + P +P
Sbjct: 189 -QGGNQSQGPPPRP 201
Score = 43.9 bits (102), Expect = 1e-04
Identities = 28/74 (37%), Positives = 31/74 (41%), Gaps = 13/74 (17%)
Query: 158 PYPQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPM-----QYPPPYPAQPMGPPAYHET 212
P P P PP G QG PP PG P P P Q PPP P +P GPP
Sbjct: 157 PRPGKPEGPPPQGGNQSQG---PPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPPP---- 209
Query: 213 LAGGAAAPYPASQP 226
GG + P +P
Sbjct: 210 -QGGNQSQGPPPRP 222
Score = 42.7 bits (99), Expect = 3e-04
Identities = 32/81 (39%), Positives = 34/81 (41%), Gaps = 17/81 (20%)
Query: 158 PYPQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPM-----QYPPPYPAQPMGPPAYHET 212
P P P PPS G QG PP PG P P P Q PPP P +P GPP
Sbjct: 220 PRPGKPEGPPSQGGNKPQG---PPPHPGKPQGPPPQEGNKPQRPPP-PGRPQGPPP---- 271
Query: 213 LAGG---AAAPYPASQPPYNP 230
GG P PA +P P
Sbjct: 272 -PGGNPQQPLPPPAGKPQGPP 291
Score = 41.2 bits (95), Expect = 8e-04
Identities = 27/74 (36%), Positives = 31/74 (41%), Gaps = 13/74 (17%)
Query: 158 PYPQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPM-----QYPPPYPAQPMGPPAYHET 212
P P P PP G QG PP+PG P P Q PPP P +P GPP
Sbjct: 73 PRPGKPEGPPPQGGNQSQG---PPPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPP---- 125
Query: 213 LAGGAAAPYPASQP 226
GG + P +P
Sbjct: 126 -QGGNQSQGPPPRP 138
Score = 41.2 bits (95), Expect = 8e-04
Identities = 27/74 (36%), Positives = 31/74 (41%), Gaps = 13/74 (17%)
Query: 158 PYPQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPM-----QYPPPYPAQPMGPPAYHET 212
P P P P G QG PP+PG P P P Q PPP P +P GPP
Sbjct: 94 PRPGKPEGQPPQGGNQSQG---PPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPP---- 146
Query: 213 LAGGAAAPYPASQP 226
GG + P +P
Sbjct: 147 -QGGNQSQGPPPRP 159
Score = 39.3 bits (90), Expect = 0.003
Identities = 24/72 (33%), Positives = 28/72 (38%), Gaps = 10/72 (13%)
Query: 160 PQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPM-----QYPPPYPAQPMGPPAYHETLA 214
P PP P P PP+PG P P P Q PPP P +P G P
Sbjct: 51 PPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGQPP-----Q 105
Query: 215 GGAAAPYPASQP 226
GG + P +P
Sbjct: 106 GGNQSQGPPPRP 117
Score = 33.5 bits (75), Expect = 0.17
Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 4/48 (8%)
Query: 160 PQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQYPPPYPAQPMGPP 207
P PP P P P +PP G P P PPP +P PP
Sbjct: 260 PPPPGRPQGPPPPGGNPQQPLPPPAGKPQGP----PPPPQGGRPHRPP 303
Score = 30.0 bits (66), Expect = 1.9
Identities = 23/68 (33%), Positives = 25/68 (36%), Gaps = 16/68 (23%)
Query: 160 PQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQYPPPYPAQPMGPPAYHETLAGGAAA 219
PQ P P GP PP G P P PP +P GPP + GG
Sbjct: 257 PQRPPPPGRPQGP--------PPPGGNPQQPL-----PPPAGKPQGPPPPPQ---GGRPH 300
Query: 220 PYPASQPP 227
P QPP
Sbjct: 301 RPPQGQPP 308
>gi|169168212 PREDICTED: hypothetical protein LOC100129566 [Homo
sapiens]
Length = 155
Score = 45.4 bits (106), Expect = 4e-05
Identities = 33/84 (39%), Positives = 36/84 (42%), Gaps = 13/84 (15%)
Query: 157 APYPQPPSV------PPSYPGPSYQGYHTMPPQPGMPAAP-YPMQYPPPYPAQPMGPPAY 209
AP+ PP V PPS PGP + G M P P M P PM PPP P GP
Sbjct: 65 APFSAPPPVGAMIPPPPSLPGPPHPG---MMPAPHMRGPPMMPMMGPPPPGMMPGGPAPG 121
Query: 210 HETLAGGAAAPYPAS---QPPYNP 230
L GG P S +PP P
Sbjct: 122 MRPLMGGHRPMMPGSPVIRPPACP 145
>gi|241982780 programmed cell death 6 interacting protein isoform 2
[Homo sapiens]
Length = 873
Score = 45.1 bits (105), Expect = 6e-05
Identities = 36/106 (33%), Positives = 40/106 (37%), Gaps = 9/106 (8%)
Query: 142 PRPVVTTTTSTTVVHAPYPQPPSVP----PSYPGPSYQGYHTMPPQPGMP--AAPYPMQY 195
P P T T P PP +P PS PS G T P P +AP P
Sbjct: 745 PTPAPRTMPPTKPQPPARPPPPVLPANRAPSATAPSPVGAGTAAPAPSQTPGSAPPPQAQ 804
Query: 196 PPPYPAQPMGPPAYHETLAGGAAAPYPASQ--PPYNPAYMDAPKAA 239
PPYP P G P Y + PY Q PY P Y +P A
Sbjct: 805 GPPYPTYP-GYPGYCQMPMPMGYNPYAYGQYNMPYPPVYHQSPGQA 849
Score = 37.0 bits (84), Expect = 0.015
Identities = 32/126 (25%), Positives = 44/126 (34%), Gaps = 7/126 (5%)
Query: 115 TIFVLSVVTIIICFTCSCCCLYKTCRRPRPVVTTTTSTTVVHAPYPQPPSVP-PSYPGPS 173
T F + I++ F C + + R + ++ A P PS+P P+Y
Sbjct: 679 TKFYNELTEILVRFQNKCSDIVFARKTERDELLKDLQQSI--AREPSAPSIPTPAYQSSP 736
Query: 174 YQGYHTMPPQPGMPAAPYPMQYPPPYPAQPMGPPAYHETLAGGAAAPYPASQPPYNPAYM 233
G+ PP P P PP P PP A A AP P PA
Sbjct: 737 AGGHAPTPPTPAPRTMPPTKPQPPARPP----PPVLPANRAPSATAPSPVGAGTAAPAPS 792
Query: 234 DAPKAA 239
P +A
Sbjct: 793 QTPGSA 798
>gi|22027538 programmed cell death 6 interacting protein isoform 1
[Homo sapiens]
Length = 868
Score = 45.1 bits (105), Expect = 6e-05
Identities = 36/106 (33%), Positives = 40/106 (37%), Gaps = 9/106 (8%)
Query: 142 PRPVVTTTTSTTVVHAPYPQPPSVP----PSYPGPSYQGYHTMPPQPGMP--AAPYPMQY 195
P P T T P PP +P PS PS G T P P +AP P
Sbjct: 740 PTPAPRTMPPTKPQPPARPPPPVLPANRAPSATAPSPVGAGTAAPAPSQTPGSAPPPQAQ 799
Query: 196 PPPYPAQPMGPPAYHETLAGGAAAPYPASQ--PPYNPAYMDAPKAA 239
PPYP P G P Y + PY Q PY P Y +P A
Sbjct: 800 GPPYPTYP-GYPGYCQMPMPMGYNPYAYGQYNMPYPPVYHQSPGQA 844
Score = 37.0 bits (84), Expect = 0.015
Identities = 32/126 (25%), Positives = 44/126 (34%), Gaps = 7/126 (5%)
Query: 115 TIFVLSVVTIIICFTCSCCCLYKTCRRPRPVVTTTTSTTVVHAPYPQPPSVP-PSYPGPS 173
T F + I++ F C + + R + ++ A P PS+P P+Y
Sbjct: 674 TKFYNELTEILVRFQNKCSDIVFARKTERDELLKDLQQSI--AREPSAPSIPTPAYQSSP 731
Query: 174 YQGYHTMPPQPGMPAAPYPMQYPPPYPAQPMGPPAYHETLAGGAAAPYPASQPPYNPAYM 233
G+ PP P P PP P PP A A AP P PA
Sbjct: 732 AGGHAPTPPTPAPRTMPPTKPQPPARPP----PPVLPANRAPSATAPSPVGAGTAAPAPS 787
Query: 234 DAPKAA 239
P +A
Sbjct: 788 QTPGSA 793
>gi|52485606 formin-like 2 [Homo sapiens]
Length = 1092
Score = 45.1 bits (105), Expect = 6e-05
Identities = 27/69 (39%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 160 PQPPSVPPSYPGP-SYQGYHTMPPQPGMPAAPYPMQYPPPYPAQPMGPPAYHETLAGGAA 218
P PP +PPS P + Q PP P P P P PPP P P P ET+
Sbjct: 528 PPPPPLPPSSDTPETVQNGPVTPPMPPPPPPPPPPPPPPPPPPPPPLPGPAAETVPAPPL 587
Query: 219 APYPASQPP 227
AP S PP
Sbjct: 588 APPLPSAPP 596
Score = 37.7 bits (86), Expect = 0.009
Identities = 26/83 (31%), Positives = 32/83 (38%), Gaps = 17/83 (20%)
Query: 147 TTTTSTTVVHAPY--PQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQYPPPYPAQPM 204
++ T TV + P P PP PP P P PP P P P P PA P+
Sbjct: 536 SSDTPETVQNGPVTPPMPPPPPPPPPPP--------PPPPPPPPPPLPGPAAETVPAPPL 587
Query: 205 GPPAYHETLAGGAAAPYPASQPP 227
PP +A P P + P
Sbjct: 588 APPL-------PSAPPLPGTSSP 603
>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
Length = 639
Score = 45.1 bits (105), Expect = 6e-05
Identities = 31/86 (36%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 147 TTTTSTTVVHAPYPQPPSVPPSYPG-PSYQGYHTMPPQPGMPAAPYPMQYPPPYPAQPMG 205
TTT++ T P+ Q + + PG P QG TM P P P P PPP P P G
Sbjct: 532 TTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPG 591
Query: 206 PPAYHETLAGGAAAPYPASQPPYNPA 231
AG AP P PP +P+
Sbjct: 592 S-------AGMMYAPPPPPPPPMDPS 610
Score = 34.3 bits (77), Expect = 0.099
Identities = 28/92 (30%), Positives = 36/92 (39%), Gaps = 14/92 (15%)
Query: 158 PYPQPPS----VPPSYPGPSYQGYHTMPPQPGMPAAPYPMQYPPPY---------PAQPM 204
P P PPS PPS P P +Q PP P P++ P P+ A
Sbjct: 480 PPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTG 539
Query: 205 GPPAYHETLAGGAAAPYPASQPPYNPAYMDAP 236
P + + A AA+P A Q NP + P
Sbjct: 540 SIPPWQQQQAAAAASP-GAPQMQGNPTMVPLP 570
Score = 33.1 bits (74), Expect = 0.22
Identities = 24/73 (32%), Positives = 27/73 (36%), Gaps = 23/73 (31%)
Query: 158 PYPQPPSVPPSYPGPSYQGYHTMPPQPG--------------------MPAAPYPMQYPP 197
P+ QPP PP GP G+H PP MP P M PP
Sbjct: 423 PWMQPPP-PPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPP 481
Query: 198 PYP--AQPMGPPA 208
P P QP PP+
Sbjct: 482 PPPPSGQPPPPPS 494
Score = 29.6 bits (65), Expect = 2.4
Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 15/66 (22%)
Query: 160 PQPPS--VPPSYPGPSYQGYHTMPPQPGMPAAPYPMQY--PPPYPAQPMGPPAYHETLAG 215
P PP +PP P PS Q PP P P P+ Q PPP PP ++A
Sbjct: 471 PPPPMGMMPPPPPPPSGQP----PPPPSGPLPPWQQQQQQPPP-------PPPPSSSMAS 519
Query: 216 GAAAPY 221
P+
Sbjct: 520 STPLPW 525
Score = 29.3 bits (64), Expect = 3.2
Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 4/51 (7%)
Query: 162 PPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQYPPPYPAQPMG--PPAYH 210
P S P +P PS G H P P P P PP P G PP +H
Sbjct: 394 PHSFP--HPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHH 442
Score = 29.3 bits (64), Expect = 3.2
Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Query: 158 PYPQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQYPPP 198
P P PP P ++ G MPP GMP AP P PPP
Sbjct: 601 PPPPPPMDPSNFVTMMGMGVAGMPPF-GMPPAPPP---PPP 637
Score = 28.9 bits (63), Expect = 4.2
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Query: 159 YPQP-PSVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQYPPPYPAQPMGPPAYHETL 213
+P P PS+ + G Q PP P M P PM P+P GPP + L
Sbjct: 397 FPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMN-QGPHPPGHHGPPPMDQYL 451
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
sapiens]
Length = 1636
Score = 45.1 bits (105), Expect = 6e-05
Identities = 39/100 (39%), Positives = 44/100 (44%), Gaps = 22/100 (22%)
Query: 158 PYPQP-PSV-----PPSYPGPSYQGYHTMPPQ-PGM--PAAPYPM--------QYPPPYP 200
P+PQP PS PP P P Q H PPQ PG+ P +PYP Q PPP
Sbjct: 957 PHPQPHPSQAFGPQPPQQPLP-LQHPHLFPPQAPGLLPPQSPYPYAPQPGVLGQPPPPLH 1015
Query: 201 AQPMGPPAYHETLAGGAAAPYPASQPPYNP----AYMDAP 236
Q PA A A P+P+ PP P AY AP
Sbjct: 1016 TQLYPGPAQDPLPAHSGALPFPSPGPPQPPHPPLAYGPAP 1055
Score = 41.2 bits (95), Expect = 8e-04
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 160 PQPPSVPPSYPGPSYQGYHT----MP-PQPGMPAAPYP-MQYPPPYPAQPMGPPAYHETL 213
P PP YPGP+ +P P PG P P+P + Y P +PMGP A T+
Sbjct: 1010 PPPPLHTQLYPGPAQDPLPAHSGALPFPSPGPPQPPHPPLAYGPAPSTRPMGPQAAPLTI 1069
Query: 214 AGGAAAPYPASQPPYNPAYMDAP 236
G ++A P P+ +P
Sbjct: 1070 RGPSSAGQSTPSPHLVPSPAPSP 1092
Score = 39.7 bits (91), Expect = 0.002
Identities = 36/111 (32%), Positives = 44/111 (39%), Gaps = 19/111 (17%)
Query: 142 PRPVVTTTTSTTVVHAPYPQPPSVPPSYPGPSYQG----YHTMPPQP-GMPA---APYPM 193
PRP T P PQP P +YP + Q +H P G PA P P
Sbjct: 897 PRPNPTPAPPPPCFPVPPPQPLPTPYTYPAGAKQPIPAQHHFSSGIPAGFPAPRIGPQPQ 956
Query: 194 QYPPPYPAQPMGP-------PAYHETLAGGAAAPYPASQPPYNPAYMDAPK 237
+P P+P+Q GP P H L A P PP +P Y AP+
Sbjct: 957 PHPQPHPSQAFGPQPPQQPLPLQHPHLFPPQA---PGLLPPQSP-YPYAPQ 1003
Score = 35.8 bits (81), Expect = 0.034
Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 5/82 (6%)
Query: 158 PYPQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQYPPPYPAQPMGPPAYHETLAGGA 217
PY P V P P + + P Q +PA + +P P P QP PP LA G
Sbjct: 999 PYAPQPGVLGQPPPPLHTQLYPGPAQDPLPAHSGALPFPSPGPPQPPHPP-----LAYGP 1053
Query: 218 AAPYPASQPPYNPAYMDAPKAA 239
A P P + P +A
Sbjct: 1054 APSTRPMGPQAAPLTIRGPSSA 1075
Score = 35.4 bits (80), Expect = 0.044
Identities = 32/93 (34%), Positives = 39/93 (41%), Gaps = 16/93 (17%)
Query: 143 RPVVTTTTSTTVVHAPYPQPPSVPPSYPGPSYQGYHTMPPQPGMPAAP-YPMQYPPPYPA 201
RP TT S + AP P + P+ P P+ PP P P P P+ P YPA
Sbjct: 878 RPATTTVDS---IQAPIPSHTAPRPN-PTPA-------PPPPCFPVPPPQPLPTPYTYPA 926
Query: 202 QPMGP-PAYHETLAG---GAAAPYPASQPPYNP 230
P PA H +G G AP QP +P
Sbjct: 927 GAKQPIPAQHHFSSGIPAGFPAPRIGPQPQPHP 959
Score = 32.7 bits (73), Expect = 0.29
Identities = 27/98 (27%), Positives = 33/98 (33%), Gaps = 13/98 (13%)
Query: 142 PRPVVTTTTSTTVVHAP-------------YPQPPSVPPSYPGPSYQGYHTMPPQPGMPA 188
PR T S T +H P Y P P +Y GP+ P MP
Sbjct: 756 PRLPDTFLGSATPLHFPPSPFPSSTGPGPHYLSGPLPPGTYSGPTQLIQPRAPGPHAMPV 815
Query: 189 APYPMQYPPPYPAQPMGPPAYHETLAGGAAAPYPASQP 226
AP P YP P +G G ++PY P
Sbjct: 816 APGPALYPAPAYTPELGLVPRSSPQHGVVSSPYVGVGP 853
Score = 32.0 bits (71), Expect = 0.49
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 8/68 (11%)
Query: 162 PPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQYPPPYPAQPMG---PPAYHETLAGGAA 218
P + P + GPS G T P P + +P P P P P +P PP G AA
Sbjct: 1062 PQAAPLTIRGPSSAGQST--PSPHLVPSPAPSPGPGPVPPRPPAAEPPPCLRR---GAAA 1116
Query: 219 APYPASQP 226
A +S P
Sbjct: 1117 ADLLSSSP 1124
Score = 31.6 bits (70), Expect = 0.64
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 154 VVHAPYP-QPPSVPPSYPGPSYQGYHTMPP--QPGMPAAPYPMQYPPPYPAQPMGPPA 208
V P P +PP +PP+ S + PP +P AP P + PP A GPP+
Sbjct: 1517 VASLPGPAEPPGLPPASLPESTPIPSSSPPPLSSPLPEAPQPKEEPPVPEAPSSGPPS 1574
Score = 29.6 bits (65), Expect = 2.4
Identities = 28/112 (25%), Positives = 40/112 (35%), Gaps = 30/112 (26%)
Query: 142 PRPVVTTTTSTTVVHAPYPQPPSVPPS-----YPGPSYQ--------------------- 175
P P T + T ++ P P ++P + YP P+Y
Sbjct: 790 PLPPGTYSGPTQLIQPRAPGPHAMPVAPGPALYPAPAYTPELGLVPRSSPQHGVVSSPYV 849
Query: 176 GYHTMPPQPGMPAAPYPMQYPPPYPAQPMGPPAYHETLAGGAAAPYPASQPP 227
G PP G+P+AP P Q+ P A + P T AP P+ P
Sbjct: 850 GVGPAPPVAGLPSAP-PPQFSGPELAMAVRPAT---TTVDSIQAPIPSHTAP 897
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 44.3 bits (103), Expect = 1e-04
Identities = 29/77 (37%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 158 PYPQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQ--YPPPYPAQP-MGPPAYHETLA 214
P P PP PP P PS G PP P +P +P P PPP P P + PP
Sbjct: 679 PLPPPPPPPPPLPPPSSAGPPPPPPPPPLPNSPAPPNPGGPPPAPPPPGLAPPPPPGLFF 738
Query: 215 GGAAAPYPASQPPYNPA 231
G ++ +SQ P PA
Sbjct: 739 GLGSS---SSQCPRKPA 752
Score = 43.1 bits (100), Expect = 2e-04
Identities = 26/72 (36%), Positives = 32/72 (44%), Gaps = 6/72 (8%)
Query: 160 PQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQYPPPYPAQPMGPPAYHETLAGGAAA 219
P P S+PP P PS G ++ P P MP P+ PP P P PP + G
Sbjct: 647 PPPASIPPPPPLPS--GLGSLSPAPPMP----PVSAGPPLPPPPPPPPPLPPPSSAGPPP 700
Query: 220 PYPASQPPYNPA 231
P P P +PA
Sbjct: 701 PPPPPPLPNSPA 712
Score = 32.7 bits (73), Expect = 0.29
Identities = 25/75 (33%), Positives = 26/75 (34%), Gaps = 20/75 (26%)
Query: 157 APYPQPPSVPPSYPGPSYQGYHTMPPQPGMP----AAPYPMQYPPPYPAQPMGPPAYHET 212
AP P S P P P PP P +P A P P PPP P P P
Sbjct: 668 APPMPPVSAGPPLPPPP-------PPPPPLPPPSSAGPPPPPPPPPLPNSPAPP------ 714
Query: 213 LAGGAAAPYPASQPP 227
P PA PP
Sbjct: 715 ---NPGGPPPAPPPP 726
>gi|11386183 WAS protein family, member 2 [Homo sapiens]
Length = 498
Score = 44.3 bits (103), Expect = 1e-04
Identities = 28/74 (37%), Positives = 33/74 (44%), Gaps = 13/74 (17%)
Query: 157 APYPQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQYPPPYPAQPMGPPAYHETLAGG 216
+P PP PPS+P + + PP P PAA YP PPP +QP GG
Sbjct: 343 SPGTPPPPSPPSFP--PHPDFAAPPPPPPPPAADYPTLPPPPL-SQP----------TGG 389
Query: 217 AAAPYPASQPPYNP 230
A P P PP P
Sbjct: 390 APPPPPPPPPPGPP 403
Score = 40.0 bits (92), Expect = 0.002
Identities = 33/92 (35%), Positives = 37/92 (40%), Gaps = 18/92 (19%)
Query: 158 PYPQPPS--------VPPSYPGPSYQGYHTMPPQP-GMPAAPYPMQYPPPYPAQPMGPPA 208
P P PPS PP P P Y T+PP P P P PPP P P PP
Sbjct: 348 PPPSPPSFPPHPDFAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPPPPGPPPPPF 407
Query: 209 YHETLAGGAAAPYPASQPPYNPAYMDAPKAAL 240
T A G PA PP + PK++L
Sbjct: 408 ---TGADG----QPAIPPPLSDT--TKPKSSL 430
Score = 37.0 bits (84), Expect = 0.015
Identities = 22/64 (34%), Positives = 26/64 (40%)
Query: 165 VPPSYPGPSYQGYHTMPPQPGMPAAPYPMQYPPPYPAQPMGPPAYHETLAGGAAAPYPAS 224
V PS+P P+ P+PG P P PPP P PP G P P S
Sbjct: 295 VSPSHPPPAPPLGSPPGPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPS 354
Query: 225 QPPY 228
PP+
Sbjct: 355 FPPH 358
Score = 35.4 bits (80), Expect = 0.044
Identities = 27/83 (32%), Positives = 31/83 (37%), Gaps = 10/83 (12%)
Query: 158 PYPQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPM-QYPPPYPAQPMGPPAYHETLAGG 216
P P PP P P P + P P P P PM PPP P G P +
Sbjct: 300 PPPAPPLGSPPGPKPGFA------PPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPP 353
Query: 217 AAAPYP---ASQPPYNPAYMDAP 236
+ P+P A PP P D P
Sbjct: 354 SFPPHPDFAAPPPPPPPPAADYP 376
Score = 34.7 bits (78), Expect = 0.076
Identities = 27/88 (30%), Positives = 35/88 (39%), Gaps = 15/88 (17%)
Query: 155 VHAPYPQPPSVP---PSYPGPSYQGYHTMPPQP----GMPAAPYPMQYPPPYPAQPMGPP 207
V +P PP+ P P P P + PP P G+P P P+ + P P PP
Sbjct: 294 VVSPSHPPPAPPLGSPPGPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPP 353
Query: 208 AY--HETLAG------GAAAPYPASQPP 227
++ H A AA YP PP
Sbjct: 354 SFPPHPDFAAPPPPPPPPAADYPTLPPP 381
Score = 30.4 bits (67), Expect = 1.4
Identities = 26/92 (28%), Positives = 32/92 (34%), Gaps = 19/92 (20%)
Query: 162 PPSVPPSYPGPSYQG--------------YHTMPPQP-GMPAAPYPMQYPPPYPAQP--- 203
PP SYP + +G H P P G P P P PPP P P
Sbjct: 269 PPPAEFSYPVDNQRGSGLAGPKRSSVVSPSHPPPAPPLGSPPGPKPGFAPPPAPPPPPPP 328
Query: 204 -MGPPAYHETLAGGAAAPYPASQPPYNPAYMD 234
+G P + G+ P PP P + D
Sbjct: 329 MIGIPPPPPPVGFGSPGTPPPPSPPSFPPHPD 360
Score = 29.6 bits (65), Expect = 2.4
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 6/37 (16%)
Query: 157 APYPQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPM 193
AP P PP PP P P + G G PA P P+
Sbjct: 390 APPPPPPPPPPGPPPPPFTG------ADGQPAIPPPL 420
Score = 28.9 bits (63), Expect = 4.2
Identities = 28/90 (31%), Positives = 34/90 (37%), Gaps = 25/90 (27%)
Query: 159 YPQPP-SVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQ-----------------YPPPYP 200
YP PP S S P PS+ +PP P + P Q +PPP P
Sbjct: 246 YPPPPQSDSASSPSPSF-SEDNLPPPPAEFSYPVDNQRGSGLAGPKRSSVVSPSHPPPAP 304
Query: 201 AQPMGPPAYHETLAGGAAAPYPASQPPYNP 230
P+G P + AP PA PP P
Sbjct: 305 --PLGSPPGPKP----GFAPPPAPPPPPPP 328
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 44.3 bits (103), Expect = 1e-04
Identities = 32/99 (32%), Positives = 37/99 (37%), Gaps = 11/99 (11%)
Query: 142 PRPVVTTTTSTTVVHAPY--PQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYP------- 192
P P + + S P +PP PP P P+ Q PP P PA P P
Sbjct: 1435 PLPGLPSANSNGTPEPPLLEEKPPPTPP--PAPTPQPQPPPPPPPPQPALPSPPPLVAPT 1492
Query: 193 MQYPPPYPAQPMGPPAYHETLAGGAAAPYPASQPPYNPA 231
PPP P P PPA A P + PP PA
Sbjct: 1493 PSSPPPPPLPPPPPPAMPSPPPPPPPAAAPLAAPPEEPA 1531
Score = 42.0 bits (97), Expect = 5e-04
Identities = 29/80 (36%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Query: 158 PYPQPPSVPPSYPGPSYQGYHTMPP--QPGMPAAPYPMQYPPPYPAQPMGPPAYHETLAG 215
P P P PP P P + PP P + P P PPP PA P PP A
Sbjct: 1463 PAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPPAAAP 1522
Query: 216 GAAAP-YPASQPPYNPAYMD 234
AA P PA+ P +P D
Sbjct: 1523 LAAPPEEPAAPSPEDPELPD 1542
Score = 40.4 bits (93), Expect = 0.001
Identities = 28/83 (33%), Positives = 33/83 (39%), Gaps = 14/83 (16%)
Query: 160 PQPPSV---PPSYPGPSYQGYHTMPPQPGMPAAPYPMQYPPPYPAQPMGPPAYHETLAGG 216
P+PP + PP P P+ PQP P P PPP PA P PP T +
Sbjct: 1448 PEPPLLEEKPPPTPPPA------PTPQPQPPPPP-----PPPQPALPSPPPLVAPTPSSP 1496
Query: 217 AAAPYPASQPPYNPAYMDAPKAA 239
P P PP P+ P A
Sbjct: 1497 PPPPLPPPPPPAMPSPPPPPPPA 1519
Score = 34.7 bits (78), Expect = 0.076
Identities = 26/83 (31%), Positives = 30/83 (36%), Gaps = 21/83 (25%)
Query: 163 PSVPPSYPGPSYQGYHTMPPQPGMPAA----------------PYPMQYPPPYPAQPMGP 206
P PP P + G PP PG+P+A P P P P P P P
Sbjct: 1419 PDGPPLAPAAAVPG---PPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPP 1475
Query: 207 PAYHETLAG--GAAAPYPASQPP 227
P L AP P+S PP
Sbjct: 1476 PPPQPALPSPPPLVAPTPSSPPP 1498
Score = 33.1 bits (74), Expect = 0.22
Identities = 25/77 (32%), Positives = 32/77 (41%), Gaps = 12/77 (15%)
Query: 160 PQPPSVPPSY--------PGPSYQGYHTMPP--QPGMPAAPYPMQYPPPYPAQPMGPPAY 209
P PP + PS P S G H + P + G P P P PPP P P+ A+
Sbjct: 796 PPPPQLLPSVLSHAPSPSPSASKVGVHLLEPATRDGAPQPPPPP--PPPPPPMPLQLEAH 853
Query: 210 HETLAGGAAAPYPASQP 226
+ AAP P +P
Sbjct: 854 LRSHGLEPAAPSPRLRP 870
Score = 33.1 bits (74), Expect = 0.22
Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 9/86 (10%)
Query: 158 PYPQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPY-PMQYPPPYPAQPMGPPAYHETLAGG 216
P P PP+ P P + P PG+ P P + P A+P+G + G
Sbjct: 980 PPPGPPAYDPYGPYCPGRASGAGPETPGLGLDPNKPPELPSTVNAEPLG------LIQSG 1033
Query: 217 A--AAPYPASQPPYNPAYMDAPKAAL 240
AAP P PP PA PK L
Sbjct: 1034 PHQAAPPPPPPPPPPPAPASEPKGGL 1059
Score = 31.2 bits (69), Expect = 0.84
Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 12/83 (14%)
Query: 158 PYPQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQYPPPYPAQPMGPPAYHETLAGGA 217
P+P P S+ S Q PP G+ +P+ + + P A + E LAGG
Sbjct: 161 PFPVPSSL-------SLQDPPFSPPANGL-LSPHDVLHLKPSQAPTVPSSLGFERLAGGG 212
Query: 218 ----AAPYPASQPPYNPAYMDAP 236
A PA PPY P D P
Sbjct: 213 VLGPAGLGPAQTPPYRPGPPDPP 235
Score = 31.2 bits (69), Expect = 0.84
Identities = 24/66 (36%), Positives = 27/66 (40%), Gaps = 12/66 (18%)
Query: 158 PYPQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQYPPPYPAQPMG---PPAYHETLA 214
P P SVPPS P Q P P PA P +PPP A +G A E L
Sbjct: 1306 PLSPPKSVPPSVPARGLQ-----PQPPATPAVP----HPPPSGAFGLGGALEAAESEGLG 1356
Query: 215 GGAAAP 220
G +P
Sbjct: 1357 LGCPSP 1362
Score = 30.8 bits (68), Expect = 1.1
Identities = 22/62 (35%), Positives = 25/62 (40%), Gaps = 13/62 (20%)
Query: 142 PRPVVTTTTSTTVVHAPYPQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQYPPPYPA 201
P P+V T S+ P PP PS PP P PAA P+ PP PA
Sbjct: 1485 PPPLVAPTPSSPPPPPLPPPPPPAMPS------------PPPPPPPAAA-PLAAPPEEPA 1531
Query: 202 QP 203
P
Sbjct: 1532 AP 1533
Score = 29.3 bits (64), Expect = 3.2
Identities = 23/66 (34%), Positives = 27/66 (40%), Gaps = 6/66 (9%)
Query: 157 APYPQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQYPPPYPAQPMGPPAYHETLAGG 216
AP P PP PP P P H + PAAP P P + + PP + L G
Sbjct: 832 APQPPPPPPPPPPPMPLQLEAH-LRSHGLEPAAPSPRL----RPEESLDPPGAMQELL-G 885
Query: 217 AAAPYP 222
A P P
Sbjct: 886 ALEPLP 891
Score = 28.1 bits (61), Expect = 7.1
Identities = 23/73 (31%), Positives = 28/73 (38%), Gaps = 1/73 (1%)
Query: 154 VVHAPYPQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQ-YPPPYPAQPMGPPAYHET 212
V+H Q P+VP S G + P PA P + PP P P P
Sbjct: 188 VLHLKPSQAPTVPSSLGFERLAGGGVLGPAGLGPAQTPPYRPGPPDPPPPPRHLPTQFNL 247
Query: 213 LAGGAAAPYPASQ 225
LA +AA A Q
Sbjct: 248 LASSSAAAAAAEQ 260
Score = 27.7 bits (60), Expect = 9.2
Identities = 27/92 (29%), Positives = 31/92 (33%), Gaps = 28/92 (30%)
Query: 176 GYHTMPPQP-----------GMPAAPYP------------MQYPPPYPAQPMGPPAYHET 212
G T PP P G PAA Y Y P P +GP AY +
Sbjct: 401 GGATRPPPPRSTATPKCQSLGGPAAAYATGKASGAGGAGGQAYSPGQPQGLLGPQAYGQG 460
Query: 213 LAGGAA-----APYPASQPPYNPAYMDAPKAA 239
GG A AP + PP P+ P A
Sbjct: 461 FGGGQAQDLSKAPSYSGGPPQPPSGPPPPGLA 492
>gi|169167975 PREDICTED: hypothetical protein LOC100129566 [Homo
sapiens]
Length = 155
Score = 43.9 bits (102), Expect = 1e-04
Identities = 33/84 (39%), Positives = 36/84 (42%), Gaps = 13/84 (15%)
Query: 157 APYPQPPSV------PPSYPGPSYQGYHTMPPQPGMPA-APYPMQYPPPYPAQPMGPPAY 209
AP+ PP V PPS PGP + G M P P M A PM PPP P GP
Sbjct: 65 APFSAPPPVGAMIPPPPSLPGPPHPG---MMPAPHMRGPAMMPMMGPPPPGMMPGGPAPG 121
Query: 210 HETLAGGAAAPYPAS---QPPYNP 230
L GG P S +PP P
Sbjct: 122 MRPLMGGHRPMMPGSPVIRPPACP 145
>gi|169167690 PREDICTED: hypothetical protein LOC100129566 [Homo
sapiens]
Length = 155
Score = 43.9 bits (102), Expect = 1e-04
Identities = 33/84 (39%), Positives = 36/84 (42%), Gaps = 13/84 (15%)
Query: 157 APYPQPPSV------PPSYPGPSYQGYHTMPPQPGMPA-APYPMQYPPPYPAQPMGPPAY 209
AP+ PP V PPS PGP + G M P P M A PM PPP P GP
Sbjct: 65 APFSAPPPVGAMIPPPPSLPGPPHPG---MMPAPHMRGPAMMPMMGPPPPGMMPGGPAPG 121
Query: 210 HETLAGGAAAPYPAS---QPPYNP 230
L GG P S +PP P
Sbjct: 122 MRPLMGGHRPMMPGSPVIRPPACP 145
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 43.9 bits (102), Expect = 1e-04
Identities = 36/106 (33%), Positives = 45/106 (42%), Gaps = 13/106 (12%)
Query: 142 PRPVVTTTTSTTVVHAPYPQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQYPPPYPA 201
P V+ T P P PS PP+ P P+ PP P P AP + PP +PA
Sbjct: 234 PGTVIQTPPFVGAAAPPAPAAPS-PPAAPAPAAPA--AAPPPP--PPAPATLARPPGHPA 288
Query: 202 QP------MGPPAYHET--LAGGAAAPYPASQPPYNPAYMDAPKAA 239
P + PPA + AG A AP PA+ P + P AA
Sbjct: 289 GPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAA 334
Score = 32.7 bits (73), Expect = 0.29
Identities = 29/91 (31%), Positives = 31/91 (34%), Gaps = 9/91 (9%)
Query: 158 PYPQPPSVPPSYPGPSYQGYHTMPPQPG-------MPAAPYPMQYPPPYPAQPMGP--PA 208
P P P P GP+ PP G +PAA P P PA P P PA
Sbjct: 105 PGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPA 164
Query: 209 YHETLAGGAAAPYPASQPPYNPAYMDAPKAA 239
AG P P P P P AA
Sbjct: 165 ALAARAGPGPGPGPGPGPGPGPGKPAGPGAA 195
Score = 31.6 bits (70), Expect = 0.64
Identities = 21/66 (31%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Query: 142 PRPVVTTTTSTTVVHAPYPQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQYPPPYPA 201
P P V + VV A P ++ S P + P G A P P PPP P
Sbjct: 338 PAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQG--ALPSPAAVPPPAPG 395
Query: 202 QPMGPP 207
P G P
Sbjct: 396 TPTGLP 401
Score = 28.5 bits (62), Expect = 5.4
Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 9/92 (9%)
Query: 142 PRPVVTTTTSTTVVHAPYPQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQYPPPY-- 199
P T S ++++ + P+V GP+ + P P PAAP + PP+
Sbjct: 192 PGAAQTLNGSAALLNSHHAAAPAVSLVNNGPA-----ALLPLP-KPAAPGTVIQTPPFVG 245
Query: 200 PAQPMGPPAYHETLAGGAAAPYPASQPPYNPA 231
A P P A A AAP A+ PP PA
Sbjct: 246 AAAPPAPAAPSPPAAPAPAAP-AAAPPPPPPA 276
>gi|130492454 zinc finger RNA binding protein 2 isoform 1 [Homo
sapiens]
Length = 939
Score = 43.9 bits (102), Expect = 1e-04
Identities = 31/91 (34%), Positives = 40/91 (43%), Gaps = 8/91 (8%)
Query: 151 STTVVHAPYPQPPSVPPS---YPGPSYQGYHTMPPQPGMPAAPYPMQYPPPYPAQPMGPP 207
S+ + YP PPS P+ Y PSY Y P P PPP P Q + PP
Sbjct: 178 SSASIVTSYP-PPSYNPTCTAYTAPSYPNYDASVYSAASPFYPPAQPPPPPGPPQQLPPP 236
Query: 208 AYHETLAGGAAAPYPASQPPYNPAYMDAPKA 238
AG ++P S+PP P+ + PKA
Sbjct: 237 ---PAPAGSGSSPRADSKPPL-PSKLPRPKA 263
Score = 33.5 bits (75), Expect = 0.17
Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Query: 160 PQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQYPPPYPAQPMG-PPAYHETLAGGAA 218
PQ + PP+ P P+ +T P PGM A P +PP PA G P + A G+
Sbjct: 15 PQYSAQPPTLPLPTVGASYTAQPTPGMDPAVNP-AFPPAAPAGYGGYQPHSGQDFAYGSR 73
Query: 219 APYPASQPPYNPAYMDA 235
P Y D+
Sbjct: 74 PQEPVPTATTMATYQDS 90
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 43.5 bits (101), Expect = 2e-04
Identities = 31/88 (35%), Positives = 36/88 (40%), Gaps = 9/88 (10%)
Query: 158 PYPQPPSVPPSYPGPSYQGYHTMPP------QPGMPAAPYPMQYPPPYPAQPMGPPAYHE 211
P P P PP+Y P G MPP PGMP P P P P+P PM A
Sbjct: 238 PGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQP-PGGPPKPWPEGPMANAAAPT 296
Query: 212 TLAGGAAAPYPASQPPYNPAYMDAPKAA 239
+ P P +P +PA P AA
Sbjct: 297 STPQKLIPPQPTGRP--SPAPPAVPPAA 322
Score = 34.7 bits (78), Expect = 0.076
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Query: 142 PRPVVTTTTSTTVVHAPYPQPPSVPPSYPGPSYQGYHT-MPPQPGMPAA--PYPMQYPPP 198
P P + T P P P ++ PGPS H+ M P PG P+A P P Q P
Sbjct: 4 PDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGG 63
Query: 199 YPAQPM 204
YP M
Sbjct: 64 YPQDNM 69
Score = 32.7 bits (73), Expect = 0.29
Identities = 24/79 (30%), Positives = 28/79 (35%), Gaps = 10/79 (12%)
Query: 158 PYPQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQYPP----------PYPAQPMGPP 207
P P P VPP PG G P+ M A P P P PA P PP
Sbjct: 261 PPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPP 320
Query: 208 AYHETLAGGAAAPYPASQP 226
A + +P +QP
Sbjct: 321 AASPVMPPQTQSPGQPAQP 339
Score = 32.7 bits (73), Expect = 0.29
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 10/39 (25%)
Query: 158 PYPQPPSVPPSYPGPSYQGYHTMPPQ---PGMPAAPYPM 193
P P PP+VPP+ MPPQ PG PA P PM
Sbjct: 311 PSPAPPAVPPA-------ASPVMPPQTQSPGQPAQPAPM 342
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 43.5 bits (101), Expect = 2e-04
Identities = 31/88 (35%), Positives = 36/88 (40%), Gaps = 9/88 (10%)
Query: 158 PYPQPPSVPPSYPGPSYQGYHTMPP------QPGMPAAPYPMQYPPPYPAQPMGPPAYHE 211
P P P PP+Y P G MPP PGMP P P P P+P PM A
Sbjct: 238 PGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQP-PGGPPKPWPEGPMANAAAPT 296
Query: 212 TLAGGAAAPYPASQPPYNPAYMDAPKAA 239
+ P P +P +PA P AA
Sbjct: 297 STPQKLIPPQPTGRP--SPAPPAVPPAA 322
Score = 34.7 bits (78), Expect = 0.076
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Query: 142 PRPVVTTTTSTTVVHAPYPQPPSVPPSYPGPSYQGYHT-MPPQPGMPAA--PYPMQYPPP 198
P P + T P P P ++ PGPS H+ M P PG P+A P P Q P
Sbjct: 4 PDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGG 63
Query: 199 YPAQPM 204
YP M
Sbjct: 64 YPQDNM 69
Score = 32.7 bits (73), Expect = 0.29
Identities = 24/79 (30%), Positives = 28/79 (35%), Gaps = 10/79 (12%)
Query: 158 PYPQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQYPP----------PYPAQPMGPP 207
P P P VPP PG G P+ M A P P P PA P PP
Sbjct: 261 PPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPP 320
Query: 208 AYHETLAGGAAAPYPASQP 226
A + +P +QP
Sbjct: 321 AASPVMPPQTQSPGQPAQP 339
Score = 32.7 bits (73), Expect = 0.29
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 10/39 (25%)
Query: 158 PYPQPPSVPPSYPGPSYQGYHTMPPQ---PGMPAAPYPM 193
P P PP+VPP+ MPPQ PG PA P PM
Sbjct: 311 PSPAPPAVPPA-------ASPVMPPQTQSPGQPAQPAPM 342
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 43.5 bits (101), Expect = 2e-04
Identities = 31/88 (35%), Positives = 36/88 (40%), Gaps = 9/88 (10%)
Query: 158 PYPQPPSVPPSYPGPSYQGYHTMPP------QPGMPAAPYPMQYPPPYPAQPMGPPAYHE 211
P P P PP+Y P G MPP PGMP P P P P+P PM A
Sbjct: 238 PGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQP-PGGPPKPWPEGPMANAAAPT 296
Query: 212 TLAGGAAAPYPASQPPYNPAYMDAPKAA 239
+ P P +P +PA P AA
Sbjct: 297 STPQKLIPPQPTGRP--SPAPPAVPPAA 322
Score = 34.7 bits (78), Expect = 0.076
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Query: 142 PRPVVTTTTSTTVVHAPYPQPPSVPPSYPGPSYQGYHT-MPPQPGMPAA--PYPMQYPPP 198
P P + T P P P ++ PGPS H+ M P PG P+A P P Q P
Sbjct: 4 PDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGG 63
Query: 199 YPAQPM 204
YP M
Sbjct: 64 YPQDNM 69
Score = 32.7 bits (73), Expect = 0.29
Identities = 24/79 (30%), Positives = 28/79 (35%), Gaps = 10/79 (12%)
Query: 158 PYPQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQYPP----------PYPAQPMGPP 207
P P P VPP PG G P+ M A P P P PA P PP
Sbjct: 261 PPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPP 320
Query: 208 AYHETLAGGAAAPYPASQP 226
A + +P +QP
Sbjct: 321 AASPVMPPQTQSPGQPAQP 339
Score = 32.7 bits (73), Expect = 0.29
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 10/39 (25%)
Query: 158 PYPQPPSVPPSYPGPSYQGYHTMPPQ---PGMPAAPYPM 193
P P PP+VPP+ MPPQ PG PA P PM
Sbjct: 311 PSPAPPAVPPA-------ASPVMPPQTQSPGQPAQPAPM 342
>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform D [Homo sapiens]
Length = 1616
Score = 43.5 bits (101), Expect = 2e-04
Identities = 31/88 (35%), Positives = 36/88 (40%), Gaps = 9/88 (10%)
Query: 158 PYPQPPSVPPSYPGPSYQGYHTMPP------QPGMPAAPYPMQYPPPYPAQPMGPPAYHE 211
P P P PP+Y P G MPP PGMP P P P P+P PM A
Sbjct: 238 PGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQP-PGGPPKPWPEGPMANAAAPT 296
Query: 212 TLAGGAAAPYPASQPPYNPAYMDAPKAA 239
+ P P +P +PA P AA
Sbjct: 297 STPQKLIPPQPTGRP--SPAPPAVPPAA 322
Score = 34.7 bits (78), Expect = 0.076
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Query: 142 PRPVVTTTTSTTVVHAPYPQPPSVPPSYPGPSYQGYHT-MPPQPGMPAA--PYPMQYPPP 198
P P + T P P P ++ PGPS H+ M P PG P+A P P Q P
Sbjct: 4 PDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGG 63
Query: 199 YPAQPM 204
YP M
Sbjct: 64 YPQDNM 69
Score = 32.7 bits (73), Expect = 0.29
Identities = 24/79 (30%), Positives = 28/79 (35%), Gaps = 10/79 (12%)
Query: 158 PYPQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQYPP----------PYPAQPMGPP 207
P P P VPP PG G P+ M A P P P PA P PP
Sbjct: 261 PPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPP 320
Query: 208 AYHETLAGGAAAPYPASQP 226
A + +P +QP
Sbjct: 321 AASPVMPPQTQSPGQPAQP 339
Score = 32.7 bits (73), Expect = 0.29
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 10/39 (25%)
Query: 158 PYPQPPSVPPSYPGPSYQGYHTMPPQ---PGMPAAPYPM 193
P P PP+VPP+ MPPQ PG PA P PM
Sbjct: 311 PSPAPPAVPPA-------ASPVMPPQTQSPGQPAQPAPM 342
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.138 0.464
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,347,785
Number of Sequences: 37866
Number of extensions: 1000440
Number of successful extensions: 16598
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 493
Number of HSP's successfully gapped in prelim test: 952
Number of HSP's that attempted gapping in prelim test: 7575
Number of HSP's gapped (non-prelim): 6038
length of query: 240
length of database: 18,247,518
effective HSP length: 99
effective length of query: 141
effective length of database: 14,498,784
effective search space: 2044328544
effective search space used: 2044328544
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.