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Search of human proteins with 21553337
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21553337 atonal homolog 7 [Homo sapiens]
(152 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21553337 atonal homolog 7 [Homo sapiens] 317 2e-87
gi|4885075 atonal homolog 1 [Homo sapiens] 82 1e-16
gi|29126247 basic helix-loop-helix family, member a15 [Homo sapi... 72 2e-13
gi|121114306 neurogenic differentiation 1 [Homo sapiens] 72 2e-13
gi|27475985 neurogenic differentiation 6 [Homo sapiens] 71 4e-13
gi|68989258 neurogenin 3 [Homo sapiens] 70 5e-13
gi|98986461 neurogenic differentiation 2 [Homo sapiens] 70 5e-13
gi|153792190 neurogenic differentiation 4 [Homo sapiens] 70 5e-13
gi|48255909 basic helix-loop-helix transcription factor 15 [Homo... 69 1e-12
gi|148922889 scleraxis homolog B [Homo sapiens] 67 4e-12
gi|186972126 scleraxis homolog A [Homo sapiens] 67 4e-12
gi|23097242 nephew of atonal 3 [Homo sapiens] 64 4e-11
gi|31077092 neurogenin 2 [Homo sapiens] 64 4e-11
gi|38455396 neurogenin 1 [Homo sapiens] 64 5e-11
gi|30039710 pancreas specific transcription factor, 1a [Homo sap... 64 6e-11
gi|116805332 musculin [Homo sapiens] 62 2e-10
gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens] 61 3e-10
gi|4885619 T-cell acute lymphocytic leukemia 2 [Homo sapiens] 60 9e-10
gi|4885665 achaete-scute complex homolog-like 2 [Homo sapiens] 60 9e-10
gi|12545384 basic helix-loop-helix transcription factor HAND2 [H... 59 1e-09
gi|4758506 basic helix-loop-helix transcription factor HAND1 [Ho... 59 2e-09
gi|4507741 twist [Homo sapiens] 57 8e-09
gi|38202237 transcription factor 21 [Homo sapiens] 56 1e-08
gi|38202239 transcription factor 21 [Homo sapiens] 56 1e-08
gi|34147558 lymphoblastic leukemia derived sequence 1 [Homo sapi... 55 3e-08
gi|239749439 PREDICTED: similar to transcription factor 23 [Homo... 54 5e-08
gi|239743573 PREDICTED: similar to transcription factor 23 [Homo... 54 5e-08
gi|226498192 atonal homolog 8 [Homo sapiens] 54 7e-08
gi|17978475 oligodendrocyte lineage transcription factor 2 [Homo... 54 7e-08
gi|17981708 twist homolog 2 [Homo sapiens] 53 1e-07
>gi|21553337 atonal homolog 7 [Homo sapiens]
Length = 152
Score = 317 bits (812), Expect = 2e-87
Identities = 152/152 (100%), Positives = 152/152 (100%)
Query: 1 MKSCKPSGPPAGARVAPPCAGGTECAGTCAGAGRLESAARRRLAANARERRRMQGLNTAF 60
MKSCKPSGPPAGARVAPPCAGGTECAGTCAGAGRLESAARRRLAANARERRRMQGLNTAF
Sbjct: 1 MKSCKPSGPPAGARVAPPCAGGTECAGTCAGAGRLESAARRRLAANARERRRMQGLNTAF 60
Query: 61 DRLRRVVPQWGQDKKLSKYETLQMALSYIMALTRILAEAERFGSERDWVGLHCEHFGRDH 120
DRLRRVVPQWGQDKKLSKYETLQMALSYIMALTRILAEAERFGSERDWVGLHCEHFGRDH
Sbjct: 61 DRLRRVVPQWGQDKKLSKYETLQMALSYIMALTRILAEAERFGSERDWVGLHCEHFGRDH 120
Query: 121 YLPFPGAKLPGESELYSQRLFGFQPEPFQMAT 152
YLPFPGAKLPGESELYSQRLFGFQPEPFQMAT
Sbjct: 121 YLPFPGAKLPGESELYSQRLFGFQPEPFQMAT 152
>gi|4885075 atonal homolog 1 [Homo sapiens]
Length = 354
Score = 82.4 bits (202), Expect = 1e-16
Identities = 41/57 (71%), Positives = 47/57 (82%)
Query: 40 RRRLAANARERRRMQGLNTAFDRLRRVVPQWGQDKKLSKYETLQMALSYIMALTRIL 96
+RRLAANARERRRM GLN AFD+LR V+P + DKKLSKYETLQMA YI AL+ +L
Sbjct: 159 QRRLAANARERRRMHGLNHAFDQLRNVIPSFNNDKKLSKYETLQMAQIYINALSELL 215
>gi|29126247 basic helix-loop-helix family, member a15 [Homo
sapiens]
Length = 189
Score = 72.0 bits (175), Expect = 2e-13
Identities = 40/84 (47%), Positives = 49/84 (58%)
Query: 10 PAGARVAPPCAGGTECAGTCAGAGRLESAARRRLAANARERRRMQGLNTAFDRLRRVVPQ 69
PA A P G G GR +S+ +RRL +N RER+RM LN AF LR V+P
Sbjct: 45 PARAAARAPGEGRRRRPGPSGPGGRRDSSIQRRLESNERERQRMHKLNNAFQALREVIPH 104
Query: 70 WGQDKKLSKYETLQMALSYIMALT 93
DKKLSK ETL +A +YI +LT
Sbjct: 105 VRADKKLSKIETLTLAKNYIKSLT 128
>gi|121114306 neurogenic differentiation 1 [Homo sapiens]
Length = 356
Score = 71.6 bits (174), Expect = 2e-13
Identities = 37/63 (58%), Positives = 46/63 (73%)
Query: 34 RLESAARRRLAANARERRRMQGLNTAFDRLRRVVPQWGQDKKLSKYETLQMALSYIMALT 93
RLE RR+ ANARER RM GLN A D LR+VVP + + +KLSK ETL++A +YI AL+
Sbjct: 95 RLERFKLRRMKANARERNRMHGLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALS 154
Query: 94 RIL 96
IL
Sbjct: 155 EIL 157
>gi|27475985 neurogenic differentiation 6 [Homo sapiens]
Length = 337
Score = 70.9 bits (172), Expect = 4e-13
Identities = 38/68 (55%), Positives = 47/68 (69%)
Query: 34 RLESAARRRLAANARERRRMQGLNTAFDRLRRVVPQWGQDKKLSKYETLQMALSYIMALT 93
RLE RR ANARER RM GLN A D LR+VVP + + +KLSK ETL++A +YI AL+
Sbjct: 88 RLERVKFRRQEANARERNRMHGLNDALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALS 147
Query: 94 RILAEAER 101
IL +R
Sbjct: 148 EILRIGKR 155
>gi|68989258 neurogenin 3 [Homo sapiens]
Length = 214
Score = 70.5 bits (171), Expect = 5e-13
Identities = 55/153 (35%), Positives = 66/153 (43%), Gaps = 26/153 (16%)
Query: 3 SCKPSGPPAGARVAPPCAGGTECAGTCAGAGRLESAAR------------------RRLA 44
+C S PP+ R CA E G C GA R A R RR
Sbjct: 30 TCPTSAPPSPTRTRGNCAEAEE--GGCRGAPRKLRARRGGRSRPKSELALSKQRRSRRKK 87
Query: 45 ANARERRRMQGLNTAFDRLRRVVPQWGQDKKLSKYETLQMALSYIMALTRILAEAERFGS 104
AN RER RM LN+A D LR V+P + D KL+K ETL+ A +YI ALT+ L A+
Sbjct: 88 ANDRERNRMHNLNSALDALRGVLPTFPDDAKLTKIETLRFAHNYIWALTQTLRIADHSLY 147
Query: 105 ERDWVGLHCEHFGRDHYLPFPGAKLPGESELYS 137
+ HC G PG LYS
Sbjct: 148 ALEPPAPHCGELGS------PGGSPGDWGSLYS 174
>gi|98986461 neurogenic differentiation 2 [Homo sapiens]
Length = 382
Score = 70.5 bits (171), Expect = 5e-13
Identities = 37/68 (54%), Positives = 47/68 (69%)
Query: 34 RLESAARRRLAANARERRRMQGLNTAFDRLRRVVPQWGQDKKLSKYETLQMALSYIMALT 93
RLE + RR ANARER RM LN A D LR+VVP + + +KLSK ETL++A +YI AL+
Sbjct: 115 RLERSKLRRQKANARERNRMHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALS 174
Query: 94 RILAEAER 101
IL +R
Sbjct: 175 EILRSGKR 182
>gi|153792190 neurogenic differentiation 4 [Homo sapiens]
Length = 331
Score = 70.5 bits (171), Expect = 5e-13
Identities = 36/63 (57%), Positives = 46/63 (73%)
Query: 34 RLESAARRRLAANARERRRMQGLNTAFDRLRRVVPQWGQDKKLSKYETLQMALSYIMALT 93
RLE RR+ ANARER RM GLN A D LRRV+P + + +KLSK ETL++A +YI AL+
Sbjct: 81 RLERFRARRVKANARERTRMHGLNDALDNLRRVMPCYSKTQKLSKIETLRLARNYIWALS 140
Query: 94 RIL 96
+L
Sbjct: 141 EVL 143
>gi|48255909 basic helix-loop-helix transcription factor 15 [Homo
sapiens]
Length = 199
Score = 69.3 bits (168), Expect = 1e-12
Identities = 44/89 (49%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 8 GPPAGARVAPPCAGGTECAGTCAGAGRLESAARRRLAANARERRRMQGLNTAFDRLRRVV 67
GP A R P GG AG GAG + R+R AANARER R Q +NTAF LR ++
Sbjct: 43 GPEAARRGPGP--GGGRRAGGGGGAGPVV-VVRQRQAANARERDRTQSVNTAFTALRTLI 99
Query: 68 PQWGQDKKLSKYETLQMALSYIMALTRIL 96
P D+KLSK ETL++A SYI L +L
Sbjct: 100 PTEPVDRKLSKIETLRLASSYIAHLANVL 128
>gi|148922889 scleraxis homolog B [Homo sapiens]
Length = 201
Score = 67.4 bits (163), Expect = 4e-12
Identities = 43/102 (42%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 2 KSCKPSGPPAGARVAPPCAGGTECAGTCAGAGRLESAARRRLAANARERRRMQGLNTAFD 61
K C+ G + A AGG G G GR R+R ANARER R +NTAF
Sbjct: 38 KPCRVHAARCGLQGARRRAGGRRAGGGGPG-GRPGREPRQRHTANARERDRTNSVNTAFT 96
Query: 62 RLRRVVPQWGQDKKLSKYETLQMALSYIMALTRILAEAERFG 103
LR ++P D+KLSK ETL++A SYI L +L E G
Sbjct: 97 ALRTLIPTEPADRKLSKIETLRLASSYISHLGNVLLAGEACG 138
>gi|186972126 scleraxis homolog A [Homo sapiens]
Length = 201
Score = 67.4 bits (163), Expect = 4e-12
Identities = 43/102 (42%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 2 KSCKPSGPPAGARVAPPCAGGTECAGTCAGAGRLESAARRRLAANARERRRMQGLNTAFD 61
K C+ G + A AGG G G GR R+R ANARER R +NTAF
Sbjct: 38 KPCRVHAARCGLQGARRRAGGRRAGGGGPG-GRPGREPRQRHTANARERDRTNSVNTAFT 96
Query: 62 RLRRVVPQWGQDKKLSKYETLQMALSYIMALTRILAEAERFG 103
LR ++P D+KLSK ETL++A SYI L +L E G
Sbjct: 97 ALRTLIPTEPADRKLSKIETLRLASSYISHLGNVLLAGEACG 138
>gi|23097242 nephew of atonal 3 [Homo sapiens]
Length = 166
Score = 64.3 bits (155), Expect = 4e-11
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 41 RRLAANARERRRMQGLNTAFDRLRRVVPQWGQDKKLSKYETLQMALSYIMALTRILAEAE 100
+R AAN RER+RM LN AFD+LRR VP + +K+LS+ ETL++A+ YI +T +L E
Sbjct: 102 QRQAANIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIETLRLAIVYISFMTELLESCE 161
Query: 101 R 101
+
Sbjct: 162 K 162
>gi|31077092 neurogenin 2 [Homo sapiens]
Length = 272
Score = 64.3 bits (155), Expect = 4e-11
Identities = 38/77 (49%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 31 GAGRLESAAR----RRLAANARERRRMQGLNTAFDRLRRVVPQWGQDKKLSKYETLQMAL 86
GA E+ R RRL AN RER RM LN A D LR V+P + +D KL+K ETL+ A
Sbjct: 99 GAKTAETVQRIKKTRRLKANNRERNRMHNLNAALDALREVLPTFPEDAKLTKIETLRFAH 158
Query: 87 SYIMALTRILAEAERFG 103
+YI ALT L A+ G
Sbjct: 159 NYIWALTETLRLADHCG 175
>gi|38455396 neurogenin 1 [Homo sapiens]
Length = 237
Score = 63.9 bits (154), Expect = 5e-11
Identities = 46/117 (39%), Positives = 59/117 (50%), Gaps = 17/117 (14%)
Query: 2 KSCKPSGPPAGARV-APPCAGGTECAGTC---------AGAGRLESAA-------RRRLA 44
++ SGPPA AR AP + +E G G R+ S A RR+
Sbjct: 37 QAASASGPPAPARRGAPNISRASEVPGAQDDEQERRRRRGRTRVRSEALLHSLRRSRRVK 96
Query: 45 ANARERRRMQGLNTAFDRLRRVVPQWGQDKKLSKYETLQMALSYIMALTRILAEAER 101
AN RER RM LN A D LR V+P + D KL+K ETL+ A +YI AL L A++
Sbjct: 97 ANDRERNRMHNLNAALDALRSVLPSFPDDTKLTKIETLRFAYNYIWALAETLRLADQ 153
>gi|30039710 pancreas specific transcription factor, 1a [Homo
sapiens]
Length = 328
Score = 63.5 bits (153), Expect = 6e-11
Identities = 39/95 (41%), Positives = 52/95 (54%), Gaps = 7/95 (7%)
Query: 9 PPAGARVAPPCAGGTECAGTCAGAGRLESAARR-------RLAANARERRRMQGLNTAFD 61
P AGA V P A +G A A R R R AAN RERRRMQ +N AF+
Sbjct: 125 PCAGAAVLSPGARLRGLSGAAAAAARRRRRVRSEAELQQLRQAANVRERRRMQSINDAFE 184
Query: 62 RLRRVVPQWGQDKKLSKYETLQMALSYIMALTRIL 96
LR +P +K+LSK +TL++A+ YI L+ ++
Sbjct: 185 GLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSELV 219
>gi|116805332 musculin [Homo sapiens]
Length = 206
Score = 61.6 bits (148), Expect = 2e-10
Identities = 39/94 (41%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 14 RVAPPCAGGTECAGTCAGAGRLESAAR---------RRLAANARERRRMQGLNTAFDRLR 64
R P AGG G+ G G+ A+ +R AANARER RM+ L+ AF RL+
Sbjct: 72 RKRPRVAGGGGAGGSAGGGGKKPLPAKGSAAECKQSQRNAANARERARMRVLSKAFSRLK 131
Query: 65 RVVPQWGQDKKLSKYETLQMALSYIMALTRILAE 98
+P D KLSK +TL++A SYI L ++L E
Sbjct: 132 TSLPWVPPDTKLSKLDTLRLASSYIAHLRQLLQE 165
>gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens]
Length = 331
Score = 61.2 bits (147), Expect = 3e-10
Identities = 31/70 (44%), Positives = 45/70 (64%)
Query: 41 RRLAANARERRRMQGLNTAFDRLRRVVPQWGQDKKLSKYETLQMALSYIMALTRILAEAE 100
RR+ N+RER R Q +N AF LR+++P DKKLSK E L++A+ YI L ++L + E
Sbjct: 188 RRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAKLLNDQE 247
Query: 101 RFGSERDWVG 110
G++R G
Sbjct: 248 EEGTQRAKTG 257
>gi|4885619 T-cell acute lymphocytic leukemia 2 [Homo sapiens]
Length = 108
Score = 59.7 bits (143), Expect = 9e-10
Identities = 28/58 (48%), Positives = 41/58 (70%)
Query: 41 RRLAANARERRRMQGLNTAFDRLRRVVPQWGQDKKLSKYETLQMALSYIMALTRILAE 98
R++ N RER R Q +N+AF +LR+++P DKKLSK ETL++A+ YI L ++L E
Sbjct: 3 RKIFTNTRERWRQQNVNSAFAKLRKLIPTHPPDKKLSKNETLRLAMRYINFLVKVLGE 60
>gi|4885665 achaete-scute complex homolog-like 2 [Homo sapiens]
Length = 193
Score = 59.7 bits (143), Expect = 9e-10
Identities = 41/102 (40%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 10 PAGARVAPPCAGGTECAGTCAGAGRLESAARRRLAA-------------NARERRRMQGL 56
P A APP G A L + RRR A N RER R++ +
Sbjct: 7 PRSAPPAPPVPVGCAARRRPASPELLRCSRRRRPATAETGGGAAAVARRNERERNRVKLV 66
Query: 57 NTAFDRLRRVVPQWGQDKKLSKYETLQMALSYIMALTRILAE 98
N F LR+ VP G KKLSK ETL+ A+ YI AL R+LAE
Sbjct: 67 NLGFQALRQHVPHGGASKKLSKVETLRSAVEYIRALQRLLAE 108
>gi|12545384 basic helix-loop-helix transcription factor HAND2 [Homo
sapiens]
Length = 217
Score = 59.3 bits (142), Expect = 1e-09
Identities = 42/104 (40%), Positives = 52/104 (50%), Gaps = 21/104 (20%)
Query: 8 GPPAGARVAPPCAGGTECAGTCAGAGRLESAARRRLAANARERRRMQGLNTAFDRLRRVV 67
G P GA PP GG +RR AN +ERRR Q +N+AF LR +
Sbjct: 82 GVPPGA--GPPGLGGPR-------------PVKRRGTANRKERRRTQSINSAFAELRECI 126
Query: 68 PQWGQDKKLSKYETLQMALSYIMALTRILA------EAERFGSE 105
P D KLSK +TL++A SYI L +LA EAE F +E
Sbjct: 127 PNVPADTKLSKIKTLRLATSYIAYLMDLLAKDDQNGEAEAFKAE 170
>gi|4758506 basic helix-loop-helix transcription factor HAND1 [Homo
sapiens]
Length = 215
Score = 58.5 bits (140), Expect = 2e-09
Identities = 39/102 (38%), Positives = 55/102 (53%), Gaps = 5/102 (4%)
Query: 6 PSGPPAGARVAPPCAGGTECAGTCAGAGRLESAA----RRRLAANARERRRMQGLNTAFD 61
P+G P A A A G + A GRLE+ RR+ + +ERRR + +N+AF
Sbjct: 57 PAGGPPPAAAAAATAYGPD-ARPGQSPGRLEALGGRLGRRKGSGPKKERRRTESINSAFA 115
Query: 62 RLRRVVPQWGQDKKLSKYETLQMALSYIMALTRILAEAERFG 103
LR +P D KLSK +TL++A SYI L +LA+ + G
Sbjct: 116 ELRECIPNVPADTKLSKIKTLRLATSYIAYLMDVLAKDAQSG 157
>gi|4507741 twist [Homo sapiens]
Length = 202
Score = 56.6 bits (135), Expect = 8e-09
Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 9/104 (8%)
Query: 5 KPSGPPAGAR--VAPPCAGGTECAG---TCAGAGR---LESAARRRLAANARERRRMQGL 56
+P P G R + C GG G + +G G E +R+ AN RER+R Q L
Sbjct: 65 EPGSPAQGKRGKKSAGCGGGGGAGGGGGSSSGGGSPQSYEELQTQRVMANVRERQRTQSL 124
Query: 57 NTAFDRLRRVVPQWGQDKKLSKYETLQMALSYIMALTRILAEAE 100
N AF LR+++P D KLSK +TL++A YI L ++L E
Sbjct: 125 NEAFAALRKIIPTLPSD-KLSKIQTLKLAARYIDFLYQVLQSDE 167
>gi|38202237 transcription factor 21 [Homo sapiens]
Length = 179
Score = 55.8 bits (133), Expect = 1e-08
Identities = 31/57 (54%), Positives = 40/57 (70%)
Query: 41 RRLAANARERRRMQGLNTAFDRLRRVVPQWGQDKKLSKYETLQMALSYIMALTRILA 97
+R AANARER RM+ L+ AF RL+ +P D KLSK +TL++A SYI L +ILA
Sbjct: 80 QRNAANARERARMRVLSKAFSRLKTTLPWVPPDTKLSKLDTLRLASSYIAHLRQILA 136
>gi|38202239 transcription factor 21 [Homo sapiens]
Length = 179
Score = 55.8 bits (133), Expect = 1e-08
Identities = 31/57 (54%), Positives = 40/57 (70%)
Query: 41 RRLAANARERRRMQGLNTAFDRLRRVVPQWGQDKKLSKYETLQMALSYIMALTRILA 97
+R AANARER RM+ L+ AF RL+ +P D KLSK +TL++A SYI L +ILA
Sbjct: 80 QRNAANARERARMRVLSKAFSRLKTTLPWVPPDTKLSKLDTLRLASSYIAHLRQILA 136
>gi|34147558 lymphoblastic leukemia derived sequence 1 [Homo
sapiens]
Length = 280
Score = 54.7 bits (130), Expect = 3e-08
Identities = 28/66 (42%), Positives = 40/66 (60%)
Query: 33 GRLESAARRRLAANARERRRMQGLNTAFDRLRRVVPQWGQDKKLSKYETLQMALSYIMAL 92
G RR+ N+RER R Q +N AF LR+++P D+KLSK E L++A+ YI L
Sbjct: 143 GHQPQKVARRVFTNSRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFL 202
Query: 93 TRILAE 98
R+L +
Sbjct: 203 VRLLRD 208
>gi|239749439 PREDICTED: similar to transcription factor 23 [Homo
sapiens]
Length = 167
Score = 53.9 bits (128), Expect = 5e-08
Identities = 50/141 (35%), Positives = 62/141 (43%), Gaps = 15/141 (10%)
Query: 5 KPSGPPAGARVAP-PCAG-------GTECAGTCAGAGRLESAARRRLAANA-RERRRMQG 55
+P+G P A P P A G G G S + R AANA RER R+Q
Sbjct: 5 RPAGSPLSASAEPAPLAAAIRDSRPGRTGPGPAGPGGGSRSGSGRPAAANAARERSRVQT 64
Query: 56 LNTAFDRLRRVVPQWGQDKKLSKYETLQMALSYIMALTRILAEAERFGSERDWVGLHCEH 115
L AF L+R +P D KLSK + L +A +YI LTR L + ++ L
Sbjct: 65 LRHAFLELQRTLPSVPPDTKLSKLDVLLLATTYIAHLTRSLQDDAEAPADAGLGALR--- 121
Query: 116 FGRDHYLPFPGAKLPGESELY 136
D YL P K P S LY
Sbjct: 122 --GDGYL-HPVKKWPMRSRLY 139
>gi|239743573 PREDICTED: similar to transcription factor 23 [Homo
sapiens]
Length = 167
Score = 53.9 bits (128), Expect = 5e-08
Identities = 50/141 (35%), Positives = 62/141 (43%), Gaps = 15/141 (10%)
Query: 5 KPSGPPAGARVAP-PCAG-------GTECAGTCAGAGRLESAARRRLAANA-RERRRMQG 55
+P+G P A P P A G G G S + R AANA RER R+Q
Sbjct: 5 RPAGSPLSASAEPAPLAAAIRDSRPGRTGPGPAGPGGGSRSGSGRPAAANAARERSRVQT 64
Query: 56 LNTAFDRLRRVVPQWGQDKKLSKYETLQMALSYIMALTRILAEAERFGSERDWVGLHCEH 115
L AF L+R +P D KLSK + L +A +YI LTR L + ++ L
Sbjct: 65 LRHAFLELQRTLPSVPPDTKLSKLDVLLLATTYIAHLTRSLQDDAEAPADAGLGALR--- 121
Query: 116 FGRDHYLPFPGAKLPGESELY 136
D YL P K P S LY
Sbjct: 122 --GDGYL-HPVKKWPMRSRLY 139
>gi|226498192 atonal homolog 8 [Homo sapiens]
Length = 321
Score = 53.5 bits (127), Expect = 7e-08
Identities = 26/55 (47%), Positives = 39/55 (70%)
Query: 41 RRLAANARERRRMQGLNTAFDRLRRVVPQWGQDKKLSKYETLQMALSYIMALTRI 95
RRL ANARER R+ ++ AF+ LR+ VP + +KLSK L++A +YI++L R+
Sbjct: 231 RRLLANARERTRVHTISAAFEALRKQVPCYSYGQKLSKLAILRIACNYILSLARL 285
>gi|17978475 oligodendrocyte lineage transcription factor 2 [Homo
sapiens]
Length = 323
Score = 53.5 bits (127), Expect = 7e-08
Identities = 40/94 (42%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 42 RLAANARERRRMQGLNTAFDRLRRVVP--QWGQDKKLSKYETLQMALSYIMALTRILAEA 99
RL N+RER+RM LN A D LR V+P +KLSK TL +A +YI+ LT L E
Sbjct: 110 RLKINSRERKRMHDLNIAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLTNSLEEM 169
Query: 100 ERFGSERDWVGLHCEHF------GRDHYLPFPGA 127
+R SE G H F G H P P A
Sbjct: 170 KRLVSE--IYGGHHAGFHPSACGGLAHSAPLPAA 201
>gi|17981708 twist homolog 2 [Homo sapiens]
Length = 160
Score = 52.8 bits (125), Expect = 1e-07
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 32 AGRLESAARRRLAANARERRRMQGLNTAFDRLRRVVPQWGQDKKLSKYETLQMALSYIMA 91
A E +R+ AN RER+R Q LN AF LR+++P D KLSK +TL++A YI
Sbjct: 58 AQSFEELQSQRILANVRERQRTQSLNEAFAALRKIIPTLPSD-KLSKIQTLKLAARYIDF 116
Query: 92 LTRILAEAE 100
L ++L E
Sbjct: 117 LYQVLQSDE 125
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.136 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,523,719
Number of Sequences: 37866
Number of extensions: 273298
Number of successful extensions: 1234
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 1122
Number of HSP's gapped (non-prelim): 144
length of query: 152
length of database: 18,247,518
effective HSP length: 93
effective length of query: 59
effective length of database: 14,725,980
effective search space: 868832820
effective search space used: 868832820
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.