Search of human proteins with 21536342

Search of human proteins with 21536342

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|21536342 T-cell leukemia/lymphoma 6 isoform TCL6b1 [Homo
sapiens]
         (105 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|21536342 T-cell leukemia/lymphoma 6 isoform TCL6b1 [Homo sapi...   235   5e-63
gi|21536344 T-cell leukemia/lymphoma 6 isoform TCL6c1 [Homo sapi...   223   3e-59
gi|21536346 T-cell leukemia/lymphoma 6 isoform TCL6d1 [Homo sapi...   221   1e-58
gi|11140823 X-linked ectodysplasin receptor [Homo sapiens]             31   0.18 
gi|6631100 natural killer-tumor recognition sequence [Homo sapiens]    31   0.24 
gi|239753102 PREDICTED: hypothetical protein [Homo sapiens]            28   2.0  
gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]          27   2.6  
gi|122937293 tubulin tyrosine ligase-like family, member 8 [Homo...    27   3.4  
gi|23943787 dermatan sulfate epimerase-like [Homo sapiens]             26   5.9  
gi|76096366 phospholipase B1 [Homo sapiens]                            26   5.9  
gi|113206030 mucin 1 isoform 8 precursor [Homo sapiens]                26   7.7  
gi|239756098 PREDICTED: hypothetical protein [Homo sapiens]            26   7.7  
gi|239751241 PREDICTED: TBC1 domain family, member 27 [Homo sapi...    26   7.7  
gi|239750629 PREDICTED: hypothetical protein XP_002347479 [Homo ...    26   7.7  
gi|239744936 PREDICTED: hypothetical protein XP_002343312 [Homo ...    26   7.7  
gi|4505853 phospholipase A2, group V precursor [Homo sapiens]          26   7.7  
gi|126116589 fibrocystin L [Homo sapiens]                              26   7.7  

>gi|21536342 T-cell leukemia/lymphoma 6 isoform TCL6b1 [Homo
           sapiens]
          Length = 105

 Score =  235 bits (600), Expect = 5e-63
 Identities = 105/105 (100%), Positives = 105/105 (100%)

Query: 1   MDAWGRLEARHKSYLHSRRGDHAKDKLQRDNRFTSQTHSHWAKSSCHCRFESRPFFLPSP 60
           MDAWGRLEARHKSYLHSRRGDHAKDKLQRDNRFTSQTHSHWAKSSCHCRFESRPFFLPSP
Sbjct: 1   MDAWGRLEARHKSYLHSRRGDHAKDKLQRDNRFTSQTHSHWAKSSCHCRFESRPFFLPSP 60

Query: 61  SWSYNRSWGGESAERTWMKQRGTCLSHSPLDLLHPGLCQHKVGAR 105
           SWSYNRSWGGESAERTWMKQRGTCLSHSPLDLLHPGLCQHKVGAR
Sbjct: 61  SWSYNRSWGGESAERTWMKQRGTCLSHSPLDLLHPGLCQHKVGAR 105


>gi|21536344 T-cell leukemia/lymphoma 6 isoform TCL6c1 [Homo
           sapiens]
          Length = 119

 Score =  223 bits (568), Expect = 3e-59
 Identities = 100/100 (100%), Positives = 100/100 (100%)

Query: 6   RLEARHKSYLHSRRGDHAKDKLQRDNRFTSQTHSHWAKSSCHCRFESRPFFLPSPSWSYN 65
           RLEARHKSYLHSRRGDHAKDKLQRDNRFTSQTHSHWAKSSCHCRFESRPFFLPSPSWSYN
Sbjct: 20  RLEARHKSYLHSRRGDHAKDKLQRDNRFTSQTHSHWAKSSCHCRFESRPFFLPSPSWSYN 79

Query: 66  RSWGGESAERTWMKQRGTCLSHSPLDLLHPGLCQHKVGAR 105
           RSWGGESAERTWMKQRGTCLSHSPLDLLHPGLCQHKVGAR
Sbjct: 80  RSWGGESAERTWMKQRGTCLSHSPLDLLHPGLCQHKVGAR 119


>gi|21536346 T-cell leukemia/lymphoma 6 isoform TCL6d1 [Homo
           sapiens]
          Length = 163

 Score =  221 bits (563), Expect = 1e-58
 Identities = 99/99 (100%), Positives = 99/99 (100%)

Query: 7   LEARHKSYLHSRRGDHAKDKLQRDNRFTSQTHSHWAKSSCHCRFESRPFFLPSPSWSYNR 66
           LEARHKSYLHSRRGDHAKDKLQRDNRFTSQTHSHWAKSSCHCRFESRPFFLPSPSWSYNR
Sbjct: 65  LEARHKSYLHSRRGDHAKDKLQRDNRFTSQTHSHWAKSSCHCRFESRPFFLPSPSWSYNR 124

Query: 67  SWGGESAERTWMKQRGTCLSHSPLDLLHPGLCQHKVGAR 105
           SWGGESAERTWMKQRGTCLSHSPLDLLHPGLCQHKVGAR
Sbjct: 125 SWGGESAERTWMKQRGTCLSHSPLDLLHPGLCQHKVGAR 163


>gi|11140823 X-linked ectodysplasin receptor [Homo sapiens]
          Length = 297

 Score = 31.2 bits (69), Expect = 0.18
 Identities = 15/43 (34%), Positives = 21/43 (48%)

Query: 34  TSQTHSHWAKSSCHCRFESRPFFLPSPSWSYNRSWGGESAERT 76
           TS++HSHW  S   C       F  S S++   + GG + E T
Sbjct: 240 TSESHSHWVHSPIECTELDLQKFSSSASYTGAETLGGNTVEST 282


>gi|6631100 natural killer-tumor recognition sequence [Homo sapiens]
          Length = 1462

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 5/59 (8%)

Query: 22  HAKDKLQRDNRFTSQTHSHWAKSS-----CHCRFESRPFFLPSPSWSYNRSWGGESAER 75
           H K+++QR   +   +   W+K       C  R++ R     S SWSYN  +   S  R
Sbjct: 364 HWKEEMQRLRAYRPPSGEKWSKGDKLSDPCSSRWDERSLSQRSRSWSYNGYYSDLSTAR 422


>gi|239753102 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 252

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 14/40 (35%), Positives = 16/40 (40%), Gaps = 1/40 (2%)

Query: 60  PSWSYNRSWGGESAERTWMKQRGTCLSHSPLDLLHPGLCQ 99
           PSW   R WGG    R     R      +    +H GLCQ
Sbjct: 163 PSWGA-RGWGGSEETRWGGDPRSQTPGETAFPAVHSGLCQ 201


>gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]
          Length = 715

 Score = 27.3 bits (59), Expect = 2.6
 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 9/75 (12%)

Query: 16  HSRRGDHAKDKLQRDNRFTSQTHSH-WAKSSCHCRFESRPFFLPSPSWSYNRSWGGESAE 74
           HS+   H+K K Q  +R   +  SH W+++    R  S      S S S  R   G S+ 
Sbjct: 329 HSQSRSHSKGKSQNQSRTPRRGRSHNWSRNPSKERSHSH-----SRSSSKERDHRGSSSP 383

Query: 75  RTWMKQRGTCLSHSP 89
           R   K+ G   S SP
Sbjct: 384 R---KESGRSQSGSP 395


>gi|122937293 tubulin tyrosine ligase-like family, member 8 [Homo
           sapiens]
          Length = 834

 Score = 26.9 bits (58), Expect = 3.4
 Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 5/58 (8%)

Query: 23  AKDKLQRDNRFTSQTHSHWAKSSCHCRFESRPFFL-----PSPSWSYNRSWGGESAER 75
           A   L RDN++  Q +       C  +F+ R +FL     P   W Y  S+   S +R
Sbjct: 363 ADHPLSRDNKWVVQKYIETPLLICDTKFDIRQWFLVTDWNPLTIWFYKESYLRFSTQR 420


>gi|23943787 dermatan sulfate epimerase-like [Homo sapiens]
          Length = 1222

 Score = 26.2 bits (56), Expect = 5.9
 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)

Query: 56  FLPSPSWSYNRSWGGESAE-RTWMKQRG 82
           F PSPS   N+ W G+  E   W+K  G
Sbjct: 513 FAPSPSSQCNKPWEGQLGECAQWLKWTG 540


>gi|76096366 phospholipase B1 [Homo sapiens]
          Length = 1458

 Score = 26.2 bits (56), Expect = 5.9
 Identities = 14/57 (24%), Positives = 20/57 (35%), Gaps = 3/57 (5%)

Query: 36  QTHSHW---AKSSCHCRFESRPFFLPSPSWSYNRSWGGESAERTWMKQRGTCLSHSP 89
           Q H  W   A   C+C  E+         WSY  +W    A   + +Q    +   P
Sbjct: 226 QYHGTWLSPAPEPCNCSEETTRLAKVVMQWSYQEAWNSLLASSRYSEQESFTVVFQP 282


>gi|113206030 mucin 1 isoform 8 precursor [Homo sapiens]
          Length = 158

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 16/47 (34%), Positives = 18/47 (38%), Gaps = 5/47 (10%)

Query: 46  CHCRFESRPFFLPSPSWSYNRSWGGESAERT-----WMKQRGTCLSH 87
           C CRF ++  F  SP  S    WG     R           G CLSH
Sbjct: 70  CFCRFINKGVFWASPILSSVWGWGARLGHRAAGAGLCSGCAGHCLSH 116


>gi|239756098 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 260

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 9/44 (20%)

Query: 41  WAKSSCHCRFESRPFFLPSPSWSYNRSWGGESAERTWMKQRGTC 84
           W  SS      SR FF PS   S   SWG  +A   W   R +C
Sbjct: 155 WRSSS------SRSFFSPSRGPSMAHSWGRSAA---WNMARTSC 189


>gi|239751241 PREDICTED: TBC1 domain family, member 27 [Homo
           sapiens]
          Length = 617

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 9/68 (13%)

Query: 34  TSQTHSHWAKSSCHCRFESRPFFLPSPSWSYNRSWGGESAE--RTWMKQRGTCLS-HSPL 90
           T     H  K+   CR + +PF LP   W    S G   AE  + W +      S +SP 
Sbjct: 57  TKYEQDHRVKTGSPCRQDPKPFTLPLSPWP---SLGHRDAELGQQWTQSMSVLTSGNSP- 112

Query: 91  DLLHPGLC 98
             +  GLC
Sbjct: 113 --VVSGLC 118


>gi|239750629 PREDICTED: hypothetical protein XP_002347479 [Homo
           sapiens]
          Length = 271

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 9/44 (20%)

Query: 41  WAKSSCHCRFESRPFFLPSPSWSYNRSWGGESAERTWMKQRGTC 84
           W  SS      SR FF PS   S   SWG  +A   W   R +C
Sbjct: 166 WRSSS------SRSFFSPSRGPSMAHSWGRSAA---WNMARTSC 200


>gi|239744936 PREDICTED: hypothetical protein XP_002343312 [Homo
           sapiens]
          Length = 271

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 9/44 (20%)

Query: 41  WAKSSCHCRFESRPFFLPSPSWSYNRSWGGESAERTWMKQRGTC 84
           W  SS      SR FF PS   S   SWG  +A   W   R +C
Sbjct: 166 WRSSS------SRSFFSPSRGPSMAHSWGRSAA---WNMARTSC 200


>gi|4505853 phospholipase A2, group V precursor [Homo sapiens]
          Length = 138

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 41 WAKSSCHCRFESRPFFLPSPSWSYNRSWGGESAE 74
          WA   C+ R E +   + + S+ Y  +WG  + E
Sbjct: 65 WAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCE 98


>gi|126116589 fibrocystin L [Homo sapiens]
          Length = 4243

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 5/43 (11%)

Query: 35   SQTHSHWAKSSCHCRFES-----RPFFLPSPSWSYNRSWGGES 72
            + T S WA    H R           FL   +WS N SWGG+S
Sbjct: 2148 AHTLSGWAPVCVHIRGVGMAKLDNADFLYVDAWSSNFSWGGKS 2190


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.131    0.461 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,976,821
Number of Sequences: 37866
Number of extensions: 218691
Number of successful extensions: 492
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 485
Number of HSP's gapped (non-prelim): 19
length of query: 105
length of database: 18,247,518
effective HSP length: 76
effective length of query: 29
effective length of database: 15,369,702
effective search space: 445721358
effective search space used: 445721358
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.