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Search of human proteins with 21495178
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21495178 hypothetical protein LOC221786 [Homo sapiens]
(573 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21495178 hypothetical protein LOC221786 [Homo sapiens] 1148 0.0
gi|223633919 hypothetical protein LOC285550 [Homo sapiens] 879 0.0
gi|115511046 zinc finger protein 258 [Homo sapiens] 376 e-104
gi|46195755 SCAN domain containing 3 [Homo sapiens] 369 e-102
gi|219521826 zinc finger, BED-type containing 5 [Homo sapiens] 335 9e-92
gi|49574210 zinc finger, BED-type containing 5 [Homo sapiens] 335 9e-92
gi|28916698 transposon-derived Buster3 transposase-like [Homo sa... 290 2e-78
gi|51241788 GTF2I repeat domain containing 2B [Homo sapiens] 137 3e-32
gi|48762700 GTF2I repeat domain containing 2 [Homo sapiens] 135 1e-31
gi|7662294 EPM2A interacting protein 1 [Homo sapiens] 107 2e-23
gi|55769564 zinc finger protein 36 [Homo sapiens] 57 5e-08
gi|113205089 zinc finger, MYM domain containing 1 [Homo sapiens] 41 0.003
gi|55741653 hypothetical protein LOC57691 [Homo sapiens] 35 0.14
gi|149773449 zinc finger protein 862 [Homo sapiens] 33 0.93
gi|21483182 zinc finger with KRAB and SCAN domains 5 [Homo sapiens] 32 1.6
gi|11036642 zinc finger with KRAB and SCAN domains 5 [Homo sapiens] 32 1.6
gi|151301228 formin binding protein 3 [Homo sapiens] 31 2.7
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens] 31 3.5
gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens] 31 3.5
gi|157671947 hypothetical protein LOC79974 isoform 2 [Homo sapiens] 30 6.0
gi|157671945 hypothetical protein LOC79974 isoform 1 [Homo sapiens] 30 6.0
gi|194018476 TBC1 domain family, member 2B isoform b [Homo sapiens] 30 6.0
gi|214831601 general transcription factor IIH, polypeptide 1, 62... 30 7.8
gi|4885365 general transcription factor IIH, polypeptide 1, 62kD... 30 7.8
gi|210032580 SET domain containing 1B [Homo sapiens] 30 7.8
>gi|21495178 hypothetical protein LOC221786 [Homo sapiens]
Length = 573
Score = 1148 bits (2970), Expect = 0.0
Identities = 573/573 (100%), Positives = 573/573 (100%)
Query: 1 MTPESRDTTDLSPGGTQEMEGIVIVKVEEEDEEDHFQKERNKVESSPQVLSRSTTMNERA 60
MTPESRDTTDLSPGGTQEMEGIVIVKVEEEDEEDHFQKERNKVESSPQVLSRSTTMNERA
Sbjct: 1 MTPESRDTTDLSPGGTQEMEGIVIVKVEEEDEEDHFQKERNKVESSPQVLSRSTTMNERA 60
Query: 61 LLSSYLVAYRVAKEKMAHTAAEKIILPACMDMVRTIFDDKSADKLRTIPLSDNTISRRIC 120
LLSSYLVAYRVAKEKMAHTAAEKIILPACMDMVRTIFDDKSADKLRTIPLSDNTISRRIC
Sbjct: 61 LLSSYLVAYRVAKEKMAHTAAEKIILPACMDMVRTIFDDKSADKLRTIPLSDNTISRRIC 120
Query: 121 TIAKHLEAMLITRLQSGIDFAIQLDESTDIASCPTLLVYVRYVWQDDFVEDLLCCLNLNS 180
TIAKHLEAMLITRLQSGIDFAIQLDESTDIASCPTLLVYVRYVWQDDFVEDLLCCLNLNS
Sbjct: 121 TIAKHLEAMLITRLQSGIDFAIQLDESTDIASCPTLLVYVRYVWQDDFVEDLLCCLNLNS 180
Query: 181 HITGLDLFTELENCLLGQYKLNWKHCKGISSDGTANMTGKHSRLTEKLLEATHNNAVWNH 240
HITGLDLFTELENCLLGQYKLNWKHCKGISSDGTANMTGKHSRLTEKLLEATHNNAVWNH
Sbjct: 181 HITGLDLFTELENCLLGQYKLNWKHCKGISSDGTANMTGKHSRLTEKLLEATHNNAVWNH 240
Query: 241 CFIHREALVSKEISPSLMDVLKNAVKTVNFIKGSSLNSRLLEIFCSEIGVNHTHLLFHTE 300
CFIHREALVSKEISPSLMDVLKNAVKTVNFIKGSSLNSRLLEIFCSEIGVNHTHLLFHTE
Sbjct: 241 CFIHREALVSKEISPSLMDVLKNAVKTVNFIKGSSLNSRLLEIFCSEIGVNHTHLLFHTE 300
Query: 301 VRWLSQGKVLSRVYELRNEIYIFLVEKQSHLANIFEDDIWVTKLAYLSDIFGILNELSLK 360
VRWLSQGKVLSRVYELRNEIYIFLVEKQSHLANIFEDDIWVTKLAYLSDIFGILNELSLK
Sbjct: 301 VRWLSQGKVLSRVYELRNEIYIFLVEKQSHLANIFEDDIWVTKLAYLSDIFGILNELSLK 360
Query: 361 MQGKNNDIFQYLEHILGFQKTLLLWQARLKSNRPSYYMFPTLLQHIEENIINEDCLKEIK 420
MQGKNNDIFQYLEHILGFQKTLLLWQARLKSNRPSYYMFPTLLQHIEENIINEDCLKEIK
Sbjct: 361 MQGKNNDIFQYLEHILGFQKTLLLWQARLKSNRPSYYMFPTLLQHIEENIINEDCLKEIK 420
Query: 421 LEILLHLTSLSQTFNYYFPEEKFESLKENIWMKDPFAFQNPESIIELNLEPEEENELLQL 480
LEILLHLTSLSQTFNYYFPEEKFESLKENIWMKDPFAFQNPESIIELNLEPEEENELLQL
Sbjct: 421 LEILLHLTSLSQTFNYYFPEEKFESLKENIWMKDPFAFQNPESIIELNLEPEEENELLQL 480
Query: 481 SSSFTLKNYYKILSLSAFWIKIKDDFPLLSRKSILLLLPFTTTYLCELGFSILTRLKTKK 540
SSSFTLKNYYKILSLSAFWIKIKDDFPLLSRKSILLLLPFTTTYLCELGFSILTRLKTKK
Sbjct: 481 SSSFTLKNYYKILSLSAFWIKIKDDFPLLSRKSILLLLPFTTTYLCELGFSILTRLKTKK 540
Query: 541 RNRLNSAPDMRVALSSCVPDWKELMNRQAHPSH 573
RNRLNSAPDMRVALSSCVPDWKELMNRQAHPSH
Sbjct: 541 RNRLNSAPDMRVALSSCVPDWKELMNRQAHPSH 573
>gi|223633919 hypothetical protein LOC285550 [Homo sapiens]
Length = 657
Score = 879 bits (2271), Expect = 0.0
Identities = 429/539 (79%), Positives = 491/539 (91%), Gaps = 1/539 (0%)
Query: 34 DHFQKERNKVESSPQVLSRSTTMNERALLSSYLVAYRVAKEKMAHTAAEKIILPACMDMV 93
++FQ+++ ++ S Q LS ST ++E+ALLSSYLVAYRVAKEK+A+TAAEKIILPAC+DMV
Sbjct: 120 EYFQRKKKDIKLSTQFLSCSTAVSEKALLSSYLVAYRVAKEKIANTAAEKIILPACLDMV 179
Query: 94 RTIFDDKSADKLRTIPLSDNTISRRICTIAKHLEAMLITRLQSGIDFAIQLDESTDIASC 153
RTIFDDKSADKL+TIP +DNT+S RICTIA+HLE MLITRLQSGIDFAIQLDESTDI SC
Sbjct: 180 RTIFDDKSADKLKTIP-NDNTVSLRICTIAEHLETMLITRLQSGIDFAIQLDESTDIGSC 238
Query: 154 PTLLVYVRYVWQDDFVEDLLCCLNLNSHITGLDLFTELENCLLGQYKLNWKHCKGISSDG 213
TLLVYVRY WQDDF+ED LC LNL SH++GLD+FTELE ++GQYKLNWK+CKGI+SDG
Sbjct: 239 TTLLVYVRYAWQDDFLEDFLCFLNLTSHLSGLDIFTELERRIVGQYKLNWKNCKGITSDG 298
Query: 214 TANMTGKHSRLTEKLLEATHNNAVWNHCFIHREALVSKEISPSLMDVLKNAVKTVNFIKG 273
TA MTGKHSR+ +KLLE T+N AVWNHCFIHRE L S+EI +LM+VLKNAVK VNFIKG
Sbjct: 299 TATMTGKHSRVIKKLLEVTNNGAVWNHCFIHREGLASREIPQNLMEVLKNAVKVVNFIKG 358
Query: 274 SSLNSRLLEIFCSEIGVNHTHLLFHTEVRWLSQGKVLSRVYELRNEIYIFLVEKQSHLAN 333
SSLNSRLLE FCSEIG NHTHLL+HT++RWLSQGK+LSRVYELRNEI+ FL+EK+SHLA+
Sbjct: 359 SSLNSRLLETFCSEIGTNHTHLLYHTKIRWLSQGKILSRVYELRNEIHFFLIEKKSHLAS 418
Query: 334 IFEDDIWVTKLAYLSDIFGILNELSLKMQGKNNDIFQYLEHILGFQKTLLLWQARLKSNR 393
IFEDD WVTKLAYL+DIF ILNELSLK+QGKN+D+FQ++E I GF+KTLLLWQ RLKSNR
Sbjct: 419 IFEDDTWVTKLAYLTDIFSILNELSLKLQGKNSDVFQHVERIQGFRKTLLLWQVRLKSNR 478
Query: 394 PSYYMFPTLLQHIEENIINEDCLKEIKLEILLHLTSLSQTFNYYFPEEKFESLKENIWMK 453
PSYYMFP LQHIEENIINE+ LKEIKLEILLHLTSLSQTFN++FPEEKFE+L+EN W+K
Sbjct: 479 PSYYMFPRFLQHIEENIINENILKEIKLEILLHLTSLSQTFNHFFPEEKFETLRENSWVK 538
Query: 454 DPFAFQNPESIIELNLEPEEENELLQLSSSFTLKNYYKILSLSAFWIKIKDDFPLLSRKS 513
DPFAF++PESIIELNL PEEENELLQLSSS+TLKN Y+ LSLSAFW+K+K+DFPLLSRKS
Sbjct: 539 DPFAFRHPESIIELNLVPEEENELLQLSSSYTLKNDYETLSLSAFWMKVKEDFPLLSRKS 598
Query: 514 ILLLLPFTTTYLCELGFSILTRLKTKKRNRLNSAPDMRVALSSCVPDWKELMNRQAHPS 572
+LLLLPFTTT LCELGFSILT+LKTK+RN LN A MRVALSSCVPDW ELMNRQAHPS
Sbjct: 599 VLLLLPFTTTSLCELGFSILTQLKTKERNGLNCAAVMRVALSSCVPDWNELMNRQAHPS 657
>gi|115511046 zinc finger protein 258 [Homo sapiens]
Length = 1325
Score = 376 bits (966), Expect = e-104
Identities = 208/543 (38%), Positives = 327/543 (60%), Gaps = 18/543 (3%)
Query: 29 EEDEEDHFQKERNKVESSPQVLSRSTTMNERALLSSYLVAYRVAKEKMAHTAAEKIILPA 88
E D F+++ ++E L + + + + +SYL+A++ A K + AE++I P
Sbjct: 797 ENKPVDFFEQKSLEMECQNSSLKKCLLVEKSLVKASYLIAFQTAASKKPFSIAEELIKPY 856
Query: 89 CMDMVRTIFDDKSADKLRTIPLSDNTISRRICTIAKHLEAMLITRLQSGIDFAIQLDEST 148
++M + + DK++TIPLS+ TI RI ++ +E LI +++ FA+Q+DES+
Sbjct: 857 LVEMCSEVLGSSAGDKMKTIPLSNVTIQHRIDELSADIEDQLIQKVRESKWFALQIDESS 916
Query: 149 DIASCPTLLVYVRYVWQD--DFVEDLLCCLNLNSHITGLDLFTELENCLLGQYKLNWKHC 206
+I++ LL Y+R++ D D E+LL C+ + + ITG ++F EL N + LNWKHC
Sbjct: 917 EISNITLLLCYIRFIDYDCRDVKEELLFCIEMPTQITGFEIF-ELINKYIDSKSLNWKHC 975
Query: 207 KGISSDGTANMTGKHSRLTEKLLEATHNNAVWNHCFIHREALVSKEISPSLMDVLKNAVK 266
G+ +DG A+MTG++S L K+ E N A + HCFIHRE LV++++SP L +L + +
Sbjct: 976 VGLCTDGAASMTGRYSGLKAKIQEVAMNTAAFTHCFIHRERLVAEKLSPCLHKILLQSAQ 1035
Query: 267 TVNFIKGSSLNSRLLEIFCSEIGVNHTHLLFHTEVRWLSQGKVLSRVYELRNEIYIFLVE 326
++FIK ++LNSR+L I C E+G H L H EVRW+S+G++L R++ELR+EI IFL +
Sbjct: 1036 ILSFIKSNALNSRMLTILCEEMGSEHVSLPLHAEVRWISRGRMLKRLFELRHEIEIFLSQ 1095
Query: 327 KQSHLANIFEDDIWVTKLAYLSDIFGILNELSLKMQGKNNDIFQYLEHILGFQKTLLLWQ 386
K S LA F D+ WV KLAYLSDIF ++NEL+L +QG F I F++ L +W
Sbjct: 1096 KHSDLAKYFHDEEWVGKLAYLSDIFSLINELNLSLQGTLTTFFNLCNKIDVFKRKLKMWL 1155
Query: 387 ARLKSNRPSYYMFPTLLQHIEENIINEDCLKEIKLEILLHLTSLSQTFNYYFPEEKFESL 446
R + N Y MFP+ + + +N + +I I HL LSQ F+ FP E+ +
Sbjct: 1156 KRTQEN--DYDMFPSFSEFSNSSGLN---MTDITRIIFEHLEGLSQVFSDCFPPEQ-DLR 1209
Query: 447 KENIWMKDPFA-FQNPESIIELNLEPEEENELLQLSSSFTLKNYYKILSLSAFWIKIKDD 505
N+W+ PF QN NL EE +L +LSS L+ +K +S++ FWI K
Sbjct: 1210 SGNLWIIHPFMNHQNN------NLTDFEEEKLTELSSDLGLQALFKSVSVTQFWINAKTS 1263
Query: 506 FPLLSRKSILLLLPFTTTYLCELGFSILTRLKTKKRNRLNSAPDMRVALSSCVPDWKELM 565
+P L +++ LLPF+T YLC+ FS LT ++K++N L S P +R+A++S +P ++L+
Sbjct: 1264 YPELHERAMKFLLPFSTVYLCDAAFSALT--ESKQKNLLGSGPALRLAVTSLIPRIEKLV 1321
Query: 566 NRQ 568
+
Sbjct: 1322 KEK 1324
>gi|46195755 SCAN domain containing 3 [Homo sapiens]
Length = 1325
Score = 369 bits (948), Expect = e-102
Identities = 212/543 (39%), Positives = 331/543 (60%), Gaps = 11/543 (2%)
Query: 33 EDHFQKERNKVESSPQVLSRSTTMNERALLSSYLVAYRVAKEKMAHTAAEKIILPACMDM 92
++ F+++ ++++S P+ + + +N AL +SY VA VAK K +T AE ++ ++
Sbjct: 792 KEFFERKSSELKSQPKQVFNVSHINISALRASYKVALPVAKSKTPYTIAETLVKDCIKEV 851
Query: 93 VRTIFDDKSADKLRTIPLSDNTISRRICTIAKHLEAMLITRLQSGIDFAIQLDESTDIAS 152
+ + +A K+ +PLS++TI+RRI +A +E LI +++ F++QLDE DIA+
Sbjct: 852 CLEMLGESAAKKVAQVPLSNDTIARRIQELANDMEDQLIEQIKLAKYFSLQLDECRDIAN 911
Query: 153 CPTLLVYVRYVWQDDFVEDLLCCLNLNSHITGLDLFTELENCLLGQYKLNWKHCKGISSD 212
LLVYVR+ DD E+ +L ++ T +L+ ++N ++ + L +K C G+ SD
Sbjct: 912 MIILLVYVRFEHDDDIKEEFFFSASLPTNTTSSELYEAVKNYIVNKCGLEFKFCVGVCSD 971
Query: 213 GTANMTGKHSRLTEKLLEATHNNAVWNHCFIHREALVSKEISPSLMDVLKNAVKTVNFIK 272
G A+MTGKHS + ++ E HCFIHRE+L K+IS L VL + VK VN+IK
Sbjct: 972 GAASMTGKHSEVVTQIKELAPECKT-THCFIHRESLAMKKISAELNSVLNDIVKIVNYIK 1030
Query: 273 GSSLNSRLLEIFCSEIGVNHTHLLFHTEVRWLSQGKVLSRVYELRNEIYIFLVEKQSHLA 332
+SLNSRL + C + +H LL H E+RWLS+GKVLSR++E+RNE+ +FL K+ +
Sbjct: 1031 SNSLNSRLFSLLCDNMEADHKQLLLHAEIRWLSRGKVLSRMFEIRNELLVFLQGKKPMWS 1090
Query: 333 NIFEDDIWVTKLAYLSDIFGILNELSLKMQGKNNDIFQYLEHILGFQKTLLLWQARLKSN 392
+F+D W +LAYLSDIF I N+L+ MQGKN F + + G ++ L W+ R+ ++
Sbjct: 1091 QLFKDVNWTARLAYLSDIFSIFNDLNASMQGKNATYFSMADKVEGQKQKLEAWKNRISTD 1150
Query: 393 RPSYYMFPTLLQHIEENIINEDCLKEIKLEILLHLTSLSQTFNYYFPEEKFESLKENIWM 452
Y MF L I E + N+ + ++ I HLT+L + F +YFP ++ + N+W+
Sbjct: 1151 --CYDMFHNLTTIINE-VGNDLDIAHLRKVISEHLTNLLECFEFYFPSKEDPRI-GNLWI 1206
Query: 453 KDPFAFQNPESIIELNLEPEEENELLQLSSSFTLK-NYYKILSLSAFWIKIKDDFPLLSR 511
++PF S LNL +++LL+L++ LK ++ SL +FWIK K+D+P L+
Sbjct: 1207 QNPFL----SSKDNLNLTVTLQDKLLKLATDEGLKISFENTASLPSFWIKAKNDYPELAE 1262
Query: 512 KSILLLLPFTTTYLCELGFSILTRLKTKKRNRLNSAPDMRVALSSCVPDWKELMN-RQAH 570
++ LLL F +TYLCE GFS L+ +KTK RN LN +RVALSS P +L + +QAH
Sbjct: 1263 IALKLLLLFPSTYLCETGFSTLSVIKTKHRNSLNIHYPLRVALSSIQPRLDKLTSKKQAH 1322
Query: 571 PSH 573
SH
Sbjct: 1323 LSH 1325
>gi|219521826 zinc finger, BED-type containing 5 [Homo sapiens]
Length = 693
Score = 335 bits (858), Expect = 9e-92
Identities = 194/544 (35%), Positives = 310/544 (56%), Gaps = 22/544 (4%)
Query: 33 EDHFQKERNKVESSPQVLSRSTTMNERALLSSYLVAYRVAKEKMAHTAAEKIILPACMDM 92
+ H N +P++++ T NE A +SY V+Y +A AHT E +I P D+
Sbjct: 169 KQHLDSPENNKPPTPKIVN---TDNESATEASYNVSYHIALSGEAHTIGELLIKPCAKDV 225
Query: 93 VRTIFDDKSADKLRTIPLSDNTISRRICTIAKHLEAMLITRLQSGIDFAIQLDESTDIAS 152
V +FD++ + K+ + LS++T++RRI +A +E L+ RL+ F++QLDES D++
Sbjct: 226 VMRMFDEQYSKKIDAVQLSNSTVARRIKDLAADIEEELVCRLKICDGFSLQLDESADVSG 285
Query: 153 CPTLLVYVRYVWQDDFVEDLLCCLNLNSHITGLDLFTELENCLLGQYKLNWKHCKGISSD 212
LLV+VRY + EDLL C +L S+ TG ++F + N + ++++ W+ C + SD
Sbjct: 286 LAVLLVFVRYRFNKSIEEDLLLCESLQSNATGEEIFNCI-NSFMQKHEIEWEKCVDVCSD 344
Query: 213 GTANMTGKHSRLTEKLLEATHNNAVWNHCFIHREALVSKEISPSLMDVLKNAVKTVNFIK 272
+ + GK + L++ + +HC ++R AL K + SL +VL AV+ +N+IK
Sbjct: 345 ASRAVDGKIAEAV-TLIKYVAPESTSSHCLLYRHALAVKIMPTSLKNVLDQAVQIINYIK 403
Query: 273 GSSLNSRLLEIFCSEIGVNHTHLLFHTEVRWLSQGKVLSRVYELRNEIYIFLVEKQSHLA 332
SRLL+I C E+G HT LL +TEVRWLS+GKVL R++ELR E+ +F+ + L+
Sbjct: 404 ARPHQSRLLKILCEEMGAQHTALLLNTEVRWLSRGKVLVRLFELRRELLVFM-DSAFRLS 462
Query: 333 NIFEDDIWVTKLAYLSDIFGILNELSLKMQGKNNDIFQYLEHILGFQKTLLLWQARLKSN 392
+ + W+ +LAYL+DIF LNE++L MQGKN +F + + + L W + ++
Sbjct: 463 DCLTNSSWLLRLAYLADIFTKLNEVNLSMQGKNVTVFTVFDKMSSLLRKLEFWASSVEEE 522
Query: 393 RPSYYMFPTLLQHIEENIINEDCLKEIKLEILLHLTSLSQTFNYYFPEEKFESLKENIWM 452
++ FPTL + E IN K+I I+ HL L T YFP N W+
Sbjct: 523 --NFDCFPTLSDFLTE--INSTVDKDICSAIVQHLRGLRATLLKYFPVTN----DNNAWV 574
Query: 453 KDPFAFQ-NPESIIELNLEPEEENELLQLSSSFTLKNYYKILSLSAFWIKIKDDFPLLSR 511
++PF P S++ + E L+ L+S +K + LSL+ FW + ++P ++R
Sbjct: 575 RNPFTVTVKPASLVARDYE-----SLIDLTSDSQVKQNFSELSLNDFWSSLIQEYPSIAR 629
Query: 512 KSILLLLPFTTTYLCELGFSILTRLKTKKRNRLNSAPDMRVALSSCVPDWKELMNR--QA 569
+++ +LLPF T +LCE GFS KTK R RL++AP MR+ LS+ P+ K + ++ Q
Sbjct: 630 RAVRVLLPFATMHLCETGFSYYAATKTKYRKRLDAAPHMRIRLSNITPNIKRICDKKTQK 689
Query: 570 HPSH 573
H SH
Sbjct: 690 HCSH 693
>gi|49574210 zinc finger, BED-type containing 5 [Homo sapiens]
Length = 693
Score = 335 bits (858), Expect = 9e-92
Identities = 194/544 (35%), Positives = 310/544 (56%), Gaps = 22/544 (4%)
Query: 33 EDHFQKERNKVESSPQVLSRSTTMNERALLSSYLVAYRVAKEKMAHTAAEKIILPACMDM 92
+ H N +P++++ T NE A +SY V+Y +A AHT E +I P D+
Sbjct: 169 KQHLDSPENNKPPTPKIVN---TDNESATEASYNVSYHIALSGEAHTIGELLIKPCAKDV 225
Query: 93 VRTIFDDKSADKLRTIPLSDNTISRRICTIAKHLEAMLITRLQSGIDFAIQLDESTDIAS 152
V +FD++ + K+ + LS++T++RRI +A +E L+ RL+ F++QLDES D++
Sbjct: 226 VMRMFDEQYSKKIDAVQLSNSTVARRIKDLAADIEEELVCRLKICDGFSLQLDESADVSG 285
Query: 153 CPTLLVYVRYVWQDDFVEDLLCCLNLNSHITGLDLFTELENCLLGQYKLNWKHCKGISSD 212
LLV+VRY + EDLL C +L S+ TG ++F + N + ++++ W+ C + SD
Sbjct: 286 LAVLLVFVRYRFNKSIEEDLLLCESLQSNATGEEIFNCI-NSFMQKHEIEWEKCVDVCSD 344
Query: 213 GTANMTGKHSRLTEKLLEATHNNAVWNHCFIHREALVSKEISPSLMDVLKNAVKTVNFIK 272
+ + GK + L++ + +HC ++R AL K + SL +VL AV+ +N+IK
Sbjct: 345 ASRAVDGKIAEAV-TLIKYVAPESTSSHCLLYRHALAVKIMPTSLKNVLDQAVQIINYIK 403
Query: 273 GSSLNSRLLEIFCSEIGVNHTHLLFHTEVRWLSQGKVLSRVYELRNEIYIFLVEKQSHLA 332
SRLL+I C E+G HT LL +TEVRWLS+GKVL R++ELR E+ +F+ + L+
Sbjct: 404 ARPHQSRLLKILCEEMGAQHTALLLNTEVRWLSRGKVLVRLFELRRELLVFM-DSAFRLS 462
Query: 333 NIFEDDIWVTKLAYLSDIFGILNELSLKMQGKNNDIFQYLEHILGFQKTLLLWQARLKSN 392
+ + W+ +LAYL+DIF LNE++L MQGKN +F + + + L W + ++
Sbjct: 463 DCLTNSSWLLRLAYLADIFTKLNEVNLSMQGKNVTVFTVFDKMSSLLRKLEFWASSVEEE 522
Query: 393 RPSYYMFPTLLQHIEENIINEDCLKEIKLEILLHLTSLSQTFNYYFPEEKFESLKENIWM 452
++ FPTL + E IN K+I I+ HL L T YFP N W+
Sbjct: 523 --NFDCFPTLSDFLTE--INSTVDKDICSAIVQHLRGLRATLLKYFPVTN----DNNAWV 574
Query: 453 KDPFAFQ-NPESIIELNLEPEEENELLQLSSSFTLKNYYKILSLSAFWIKIKDDFPLLSR 511
++PF P S++ + E L+ L+S +K + LSL+ FW + ++P ++R
Sbjct: 575 RNPFTVTVKPASLVARDYE-----SLIDLTSDSQVKQNFSELSLNDFWSSLIQEYPSIAR 629
Query: 512 KSILLLLPFTTTYLCELGFSILTRLKTKKRNRLNSAPDMRVALSSCVPDWKELMNR--QA 569
+++ +LLPF T +LCE GFS KTK R RL++AP MR+ LS+ P+ K + ++ Q
Sbjct: 630 RAVRVLLPFATMHLCETGFSYYAATKTKYRKRLDAAPHMRIRLSNITPNIKRICDKKTQK 689
Query: 570 HPSH 573
H SH
Sbjct: 690 HCSH 693
>gi|28916698 transposon-derived Buster3 transposase-like [Homo
sapiens]
Length = 594
Score = 290 bits (743), Expect = 2e-78
Identities = 180/552 (32%), Positives = 298/552 (53%), Gaps = 31/552 (5%)
Query: 34 DHFQKER--------NKVESSPQVLSRSTTMN--------ERALLSSYLVAYRVAKEKMA 77
DHF ++ N ++ P +S T+ + L +SY AY AKEK
Sbjct: 49 DHFNRQHGGVAGHDLNSLKHMPAPSDQSETLKAFGVASHEDTLLQASYQFAYLCAKEKNP 108
Query: 78 HTAAEKIILPACMDMVRTIFDDKSADKLRTIPLSDNTISRRICTIAKHLEAMLITRLQ-S 136
HT AEK++ P +++ + + + KL+ +PLSD+ I RI +++ + ++ ++ S
Sbjct: 109 HTVAEKLVKPCALEIAQIVLGPDAQKKLQQVPLSDDVIHSRIDEMSQDILQQVLEDIKAS 168
Query: 137 GIDFAIQLDESTDIASCPTLLVYVRYVWQDDFVEDLLCCLNLNSHITGLDLFTELENCLL 196
+ IQL E+TD+ C L+ +VRY+ + + VE+ L C L + G+D+F + L
Sbjct: 169 PLKVGIQLAETTDMDDCSQLMAFVRYIKEREIVEEFLFCEPLQLSMKGIDVFNLFRDFFL 228
Query: 197 GQYKLNWKHCKGISSDGTANMTGKHSRLTEKLLEATHNNAVWNHCFIHREALVSKEISPS 256
++K+ C + +DG ++M G++S + + + V HC ++ ALV K +
Sbjct: 229 -KHKIALDVCGSVCTDGASSMLGENSEFVAYVKKEIPHIVV-THCLLNPHALVIKTLPTK 286
Query: 257 LMDVLKNAVKTVNFIKGSSLNSRLLEIFCSEIGVNHTHLLFHTEVRWLSQGKVLSRVYEL 316
L D L V+ +NFIKG + N RL + F EIG+ ++ LLFHTE+RWLS+G++L+ ++E+
Sbjct: 287 LRDALFTVVRVINFIKGRAPNHRLFQAFFEEIGIEYSVLLFHTEMRWLSRGQILTHIFEM 346
Query: 317 RNEIYIFLVEKQSHLANIFEDDIWVTKLAYLSDIFGILNELSLKMQGKNNDIFQYLEHIL 376
EI FL K S+L + FE+ + LAYL+D+F LNELS MQ + E +
Sbjct: 347 YEEINQFLHHKSSNLVDGFENKEFKIHLAYLADLFKHLNELSASMQRTGMNTVSAREKLS 406
Query: 377 GFQKTLLLWQARLKSNRPSYYMFPTLLQHIEENIINEDCLKEIKLEILLHLTSLSQTFNY 436
F + WQ R++ + + F +EE I++++ I EI LHL LS F+
Sbjct: 407 AFVRKFPFWQKRIEKRNFTNFPF------LEEIIVSDNEGIFIAAEITLHLQQLSNFFHG 460
Query: 437 YFPEEKFESLKENIWMKDPFAFQNPESIIELNLEPEEENELLQLSSSFTLKNYYKILSLS 496
YF + W+ DPF F N + + + L +N+L +L +S + ++ + L
Sbjct: 461 YFSIGDLNEASK--WILDPFLF-NIDFVDDSYL---MKNDLAELRASGQILMEFETMKLE 514
Query: 497 AFWIKIKDDFPLLSRKSILLLLPFTTTYLCELGFSILTRLKTKKRNRLNSAPDMRVALSS 556
FW FP L++ ++ +L+PF TTYLCELGFS L KTK R+ N + D+RVA+S
Sbjct: 515 DFWCAQFTAFPNLAKTALEILMPFATTYLCELGFSSLLHFKTKSRSCFNLSDDIRVAISK 574
Query: 557 CVPDWKELMNRQ 568
VP + +++ ++
Sbjct: 575 KVPRFSDIIEQK 586
>gi|51241788 GTF2I repeat domain containing 2B [Homo sapiens]
Length = 949
Score = 137 bits (345), Expect = 3e-32
Identities = 112/434 (25%), Positives = 202/434 (46%), Gaps = 31/434 (7%)
Query: 122 IAKHLEAMLITRLQSGIDFAIQLDESTDIASCPTLLVYVRYVWQD-DFVEDLLCCLNLNS 180
+A +L L +++S + ++I +DE TDI + L +++R V ++ D E+LL + +
Sbjct: 529 LAGNLWEKLREKIRSFVAYSIAIDEITDINNTTQLAIFIRGVDENFDVSEELLDTVPMTG 588
Query: 181 HITGLDLFTELENCLLGQYKLNWKHCKGISSDGTANMTGKHSRLTEKLLEATHNNAVWNH 240
+G ++F +E L ++ +NW ++S GT M ++ L KL
Sbjct: 589 TKSGNEIFLRVEKSLK-KFCINWSRLVSVASTGTPAMVDANNGLVTKLKSRVATFCKGAE 647
Query: 241 -----CFIHREALVSKEISPS-LMDVLKNAVKTVNFIKGSSLNSRLLEIFCSEIGVNHTH 294
C IH E+L ++++ +MDV+ VK+VN+I LN E+ +
Sbjct: 648 LKSICCIIHPESLCAQKLKMDHVMDVV---VKSVNWICSRGLNHSEFTTLLYELDSQYGS 704
Query: 295 LLFHTEVRWLSQGKVLSRVYELRNEIYIFLVEKQSHLANIFEDDIWVTKLAYLSDIFGIL 354
LL++TE++WLS+G VL R +E EI F+ + L + D W+ LA+L D+ L
Sbjct: 705 LLYYTEIKWLSRGLVLKRFFESLEEIDSFMSSRGKPLPQLSSID-WIRDLAFLVDMTMHL 763
Query: 355 NELSLKMQGKNNDIFQYLEHILGFQKTLLLWQARLKSNRPSYYMFPTLLQHIEENIINE- 413
N L++ +QG + + Q + I F L LW+ L N +++ L+ E + +N
Sbjct: 764 NALNISLQGHSQIVTQMYDLIRAFLAKLCLWETHLTRNNLAHFPTLKLVSRNESDGLNYI 823
Query: 414 DCLKEIKLEILLHLTSLSQTFNYYFPEEKFESLKENIWMKDPFAFQNPESIIELNLEPEE 473
+ E+K E L+ ++ + F +P S ++ E
Sbjct: 824 PKIAELKTEFQKRLSDF------------------KLYESELTLFSSPFSTKIDSVHEEL 865
Query: 474 ENELLQLSSSFTLKNYYKILSLSAFWIKIKDDFPLLSRKSILLLLPFTTTYLCELGFSIL 533
+ E++ L + LK Y + + F+ + +P +L F +TY+CE FSI+
Sbjct: 866 QMEVIDLQCNTVLKTKYDKVGIPEFYKYLWGSYPKYKHHCAKILSMFGSTYICEQLFSIM 925
Query: 534 TRLKTKKRNRLNSA 547
KTK ++L +
Sbjct: 926 KLSKTKYCSQLKDS 939
>gi|48762700 GTF2I repeat domain containing 2 [Homo sapiens]
Length = 949
Score = 135 bits (339), Expect = 1e-31
Identities = 111/434 (25%), Positives = 202/434 (46%), Gaps = 31/434 (7%)
Query: 122 IAKHLEAMLITRLQSGIDFAIQLDESTDIASCPTLLVYVRYVWQD-DFVEDLLCCLNLNS 180
+A +L L +++S + ++I +DE TDI + L +++R V ++ D E+LL + +
Sbjct: 529 LAGNLWEKLREKIRSFVAYSIAIDEITDINNTTQLAIFIRGVDENFDVSEELLDTVPMTG 588
Query: 181 HITGLDLFTELENCLLGQYKLNWKHCKGISSDGTANMTGKHSRLTEKLLEATHNNAVWNH 240
+G ++F+ +E L ++ ++W ++S GT M ++ L KL
Sbjct: 589 TKSGNEIFSRVEKSLK-KFCIDWSKLVSVASTGTPAMVDANNGLVTKLKSRVATFCKGAE 647
Query: 241 -----CFIHREALVSKEISPS-LMDVLKNAVKTVNFIKGSSLNSRLLEIFCSEIGVNHTH 294
C IH E+L ++++ +MDV+ VK+VN+I LN E+ +
Sbjct: 648 LKSICCIIHPESLCAQKLKMDHVMDVV---VKSVNWICSRGLNHSEFTTLLYELDSQYGS 704
Query: 295 LLFHTEVRWLSQGKVLSRVYELRNEIYIFLVEKQSHLANIFEDDIWVTKLAYLSDIFGIL 354
LL++TE++WLS+G VL R +E EI F+ + L + D W+ LA+L D+ L
Sbjct: 705 LLYYTEIKWLSRGLVLKRFFESLEEIDSFMSSRGKPLPQLSSID-WIRDLAFLVDMTMHL 763
Query: 355 NELSLKMQGKNNDIFQYLEHILGFQKTLLLWQARLKSNRPSYYMFPTLLQHIEENIINE- 413
N L++ +QG + + Q + I F L LW+ L N +++ L E + +N
Sbjct: 764 NALNISLQGHSQIVTQMYDLIRAFLAKLCLWETHLTRNNLAHFPTLKLASRNESDGLNYI 823
Query: 414 DCLKEIKLEILLHLTSLSQTFNYYFPEEKFESLKENIWMKDPFAFQNPESIIELNLEPEE 473
+ E+K E L+ ++ + F +P S ++ E
Sbjct: 824 PKIAELKTEFQKRLSDF------------------KLYESELTLFSSPFSTKIDSVHEEL 865
Query: 474 ENELLQLSSSFTLKNYYKILSLSAFWIKIKDDFPLLSRKSILLLLPFTTTYLCELGFSIL 533
+ E++ L + LK Y + + F+ + +P +L F +TY+CE FSI+
Sbjct: 866 QMEVIDLQCNTVLKTKYDKVGIPEFYKYLWGSYPKYKHHCAKILSMFGSTYICEQLFSIM 925
Query: 534 TRLKTKKRNRLNSA 547
KTK ++L +
Sbjct: 926 KLSKTKYCSQLKDS 939
>gi|7662294 EPM2A interacting protein 1 [Homo sapiens]
Length = 607
Score = 107 bits (268), Expect = 2e-23
Identities = 131/576 (22%), Positives = 245/576 (42%), Gaps = 48/576 (8%)
Query: 23 VIVKVEEEDEEDHFQKERNKVESSPQVLSRSTTMNERALLSSYLVAYRVAKEKMAHTA-- 80
+IV E D H++ E E R+ + ER VA +E+ A
Sbjct: 45 LIVATRERDVRRHYEAEHEYYERYVADGERAALV-ERLRQGDLPVASFTPEERAARAGLG 103
Query: 81 ------------AEKIILPACMDMVRTIFDDKSADKLRTIPLSDNTISRRICTIAKHLEA 128
E + CM+++ + L+ + LS + +RI +I ++L
Sbjct: 104 LCRLLALKGRGWGEGDFVYQCMEVLLREVLPEHVSVLQGVDLSPDITRQRILSIDRNLRN 163
Query: 129 MLITRLQSGIDFAIQLDESTDIASCPTLLVYVRYVWQD-DFVEDLLCCLNLNSHIT-GLD 186
L R + +++ LD+ +A LLV++R V + + EDLL +NL H + G
Sbjct: 164 QLFNRARDFKAYSLALDDQAFVAYENYLLVFIRGVGPELEVQEDLLTIINLTHHFSVGAL 223
Query: 187 LFTELENCLLGQYKLNWKHCKGISSDGTANMTGKHSRLTEKLLEATHNNAVWN----HCF 242
+ LE+ L L+ + G+++ T M G++S L + E + WN F
Sbjct: 224 MSAILES--LQTAGLSLQRMVGLTTTHTLRMIGENSGLVSYMREKAVSPNCWNVIHYSGF 281
Query: 243 IHREALVSKEISPSLMDVLKNAVKTVNFIKGSSLNSRLLEIFCSEIGVNHTHLLFHTEV- 301
+H E L S ++ + ++ + + IK + + +E H + +
Sbjct: 282 LHLELLSSYDV--DVNQIINTISEWIVLIKTRGVRRPEFQTLLTESESEHGERVNGRCLN 339
Query: 302 RWLSQGKVLSRVYELRNEIYIFLVEKQSHLANIFEDDIWVTKLAYLSDIFGILNELSLKM 361
WL +GK L ++ LR E+ FLV + + F D W+ +L DI L ELS ++
Sbjct: 340 NWLRRGKTLKLIFSLRKEMEAFLVSVGATTVH-FSDKQWLCDFGFLVDIMEHLRELSEEL 398
Query: 362 QGKNNDIFQYLEHILGFQKTLLLWQARLKSNRPSYYMFPTLLQHIEE----NIINEDCLK 417
+ +HI F+ L L+Q ++ + FP L + ++E N +E
Sbjct: 399 RVSKVFAAAAFDHICTFEVKLNLFQRHIEEK--NLTDFPALREVVDELKQQNKEDEKIFD 456
Query: 418 EIKLEILLHLTSLSQTFNYYFPEEKFESLKENIWM-KDPFAFQNPESIIELNLEPEEENE 476
+ +++ + L + F +F + +F +K+++ + +PF F+ + I + + E
Sbjct: 457 PDRYQMV--ICRLQKEFERHFKDLRF--IKKDLELFSNPFNFKPEYAPISVRV------E 506
Query: 477 LLQLSSSFTLKNYYKILSLSAFWIKIK-DDFPLLSRKSILLLLPFTTTYLCELGFSILTR 535
L +L ++ L N Y+I L F+ + + +P++ + + F + +CE FS LTR
Sbjct: 507 LTKLQANTNLWNEYRIKDLGQFYAGLSAESYPIIKGVACKVASLFDSNQICEKAFSYLTR 566
Query: 536 LKTKKRNRLNS---APDMRVALSSCVPDWKELMNRQ 568
+ L RVA + P W +L+ +
Sbjct: 567 NQHTLSQPLTDEHLQALFRVATTEMEPGWDDLVRER 602
>gi|55769564 zinc finger protein 36 [Homo sapiens]
Length = 563
Score = 57.0 bits (136), Expect = 5e-08
Identities = 27/47 (57%), Positives = 34/47 (72%)
Query: 1 MTPESRDTTDLSPGGTQEMEGIVIVKVEEEDEEDHFQKERNKVESSP 47
MT ESR+ T LSP QE +GIVIVKVEEEDEEDH + + ++ +P
Sbjct: 2 MTAESREATGLSPQAAQEKDGIVIVKVEEEDEEDHMWGQDSTLQDTP 48
>gi|113205089 zinc finger, MYM domain containing 1 [Homo sapiens]
Length = 1142
Score = 40.8 bits (94), Expect = 0.003
Identities = 107/508 (21%), Positives = 189/508 (37%), Gaps = 81/508 (15%)
Query: 130 LITRLQSGIDFAIQLDESTDIASCPTLLVYVRYVWQDD---FVEDLLCCLNLNSHITGLD 186
++ + F+I DE+ + A L + VRY + +++ +TG
Sbjct: 633 IVNEINDSSAFSIICDETINSAMKEQLSICVRYPQKSSKAILIKERFLGFVDTEEMTGTH 692
Query: 187 LFTELENCLLGQYKLNWKHCKGISSDGTANMTGKHSRLTEKLLEATHNNAVWNHCFIHRE 246
L ++ L Q ++ G + D T N+ K +++ + + A++ HC+ H
Sbjct: 693 LHRTIKT-YLQQIGVDMDKIHGQAYDSTTNLKIKFNKIAAEF-KKEEPRALYIHCYAHFL 750
Query: 247 ALVSKEISPSLMDVLKNAVKTVNFIKGS-SLNSRLLEIFCS--EIGVNHTHLLFHTEVRW 303
L + + L++A+KT++ + + ++ +L F + + N T ++ W
Sbjct: 751 DLSIIRFCKEVKE-LRSALKTLSSLFNTICMSGEMLANFRNIYRLSQNKTCKKHISQSCW 809
Query: 304 LSQGKVLSRVYELRNEIYIFLVEKQSHLANI-FEDDI-----------WVTKLAYLSDIF 351
+ L V + EI L SH +N F D++ +V L +L +
Sbjct: 810 TVHDRTLLSVIDSLPEIIETLEVIASHSSNTSFADELSHLLTLVSKFEFVFCLKFLYRVL 869
Query: 352 GILNELSLKMQGKNNDIFQYLEHILGFQKTLLLWQARLKSNRPSYYMFPTLLQHIEENII 411
+ LS ++Q K DIF I + L S R Y F T+ EE I
Sbjct: 870 SVTGILSKELQNKTIDIFSLSSKIEAILEC-------LSSERNDVY-FKTIWDGTEE-IC 920
Query: 412 NEDCLKEIKLE--------ILLHLTSLSQTFNYYFPEEKFESLKENIWMK---------- 453
+ K K+E + L + N +FP E K NI+ +
Sbjct: 921 QKITCKGFKVEKPSLQKRRKIQKSVDLGNSDNMFFPTSTEEQYKINIYYQGLDTILQNLK 980
Query: 454 ---DPFAFQNPESIIELNL---EPEEENELLQLSSSFTL-----------KNYYKI---- 492
F + + I EL EP E + + L ++Y K+
Sbjct: 981 LCFSEFDYCKIKQISELLFKWNEPLNETTAKHVQEFYKLDEDIIPELRFYRHYAKLNFVI 1040
Query: 493 -------LSLSAFWIK--IKDDFPLLSRKSILLLLPFTTTYLCELGFSILTRLKTKKRNR 543
+SL +I+ + + P LS+ + L T+ E FS L RLKT N
Sbjct: 1041 DDSCINFVSLGCLFIQHGLHSNIPCLSKLLYIALSWPITSASTENSFSTLPRLKTYLCNT 1100
Query: 544 LNSAPDMRVALSSCVPDWKELMNRQAHP 571
+ AL + +EL+N+ P
Sbjct: 1101 MGQEKLTGPALMAVE---QELVNKLMEP 1125
>gi|55741653 hypothetical protein LOC57691 [Homo sapiens]
Length = 787
Score = 35.4 bits (80), Expect = 0.14
Identities = 61/276 (22%), Positives = 112/276 (40%), Gaps = 49/276 (17%)
Query: 122 IAKHLEAMLITRL-QSGIDFAIQLDESTDIASCPTLLVYVR------------YVWQDDF 168
IAK ++ + + + I +DE++ ++ TL++Y++ +V +
Sbjct: 295 IAKEMKMKIFKNIIEENAKICIIIDEASTVSKKTTLVIYLQCTIQSAPAPVMLFVALKEL 354
Query: 169 VEDLLCCLNLNSHITGLDLFTELENCLLGQYKLNWKHCKGISSDGTANMTGKHSRLTEKL 228
V + C+ +N+ L T L +C L + SDG + G+ S + KL
Sbjct: 355 VSTIAECI-VNT------LLTTLNDCGFTNEYLK-ANLIAFCSDGANTILGRKSGVATKL 406
Query: 229 LEATHNNAVWNHCFIHREALVSKEISPSLMDVLKNAVKTVNFIKGSSLNSRLLEIFCSEI 288
LE +WN C HR L SL D + + +K +N +K ++ I+ +
Sbjct: 407 LENFPEIIIWN-CLNHRLQL-------SLDDSI-SEIKQINHLK--IFIDKIYSIY-HQP 454
Query: 289 GVNHTHLL------FHTEV---------RWLSQG-KVLSRVYELRNEIYIFLVEKQSHLA 332
N T LL TE+ RW + + + V+ +Y+ S LA
Sbjct: 455 NKNQTKLLGTVAKELETEIIKIGRVMGPRWAACSLQAATAVWHAYPILYMHFSHSYSGLA 514
Query: 333 NIFEDDIWVTKLAYLSDIFGILNELSLKMQGKNNDI 368
+ ++ LA + DI + LS +Q ++ +I
Sbjct: 515 KRLANINFLQDLALMIDILEEFSVLSTALQSRSTNI 550
>gi|149773449 zinc finger protein 862 [Homo sapiens]
Length = 1169
Score = 32.7 bits (73), Expect = 0.93
Identities = 14/41 (34%), Positives = 26/41 (63%)
Query: 506 FPLLSRKSILLLLPFTTTYLCELGFSILTRLKTKKRNRLNS 546
FPLLS+ +++ +T CE GF + R++T +R +L++
Sbjct: 1019 FPLLSKLMAVVVCVPISTSCCERGFKAMNRIRTDERTKLSN 1059
Score = 31.2 bits (69), Expect = 2.7
Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 17/179 (9%)
Query: 116 SRRICT-----IAKHLEAMLITRLQSGIDFAIQLDESTDIASCPTLLVYVRYVWQDDFVE 170
+R CT I++ L+ ++ +++ ++ LD STD + + +Y+RY Q + E
Sbjct: 595 NRTACTQFIKYISETLKREILEDVRNSPCVSVLLDSSTDASEQACVGIYIRYFKQMEVKE 654
Query: 171 DLLCCLNLNSHITG---LDLFTELENCLLGQYKLNWKHCKGISSDGTANMTGKHSRLTEK 227
+ L S + + L+ + K W G+ +DG+A M L EK
Sbjct: 655 SYITLAPLYSETADGYFETIVSALDELDIPFRKPGW--VVGLGTDGSA-MLSCRGGLVEK 711
Query: 228 LLEATHNNAVWNHCFIHREALVSKEISPSLMDVLKNA---VKTVNFIKGSSLNSRLLEI 283
E + HC HR L + S+ D++K ++TV F S N RL E+
Sbjct: 712 FQEVI-PQLLPVHCVAHRLHLAVVDACGSI-DLVKKCDRHIRTV-FKFYQSSNKRLNEL 767
>gi|21483182 zinc finger with KRAB and SCAN domains 5 [Homo
sapiens]
Length = 839
Score = 32.0 bits (71), Expect = 1.6
Identities = 17/30 (56%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Query: 4 ESRDTTDLSPGG--TQEMEGIVIVKVEEED 31
ESR+ DL P +QE E + IVKVEEED
Sbjct: 5 ESREVIDLDPPAETSQEQEDLFIVKVEEED 34
>gi|11036642 zinc finger with KRAB and SCAN domains 5 [Homo
sapiens]
Length = 839
Score = 32.0 bits (71), Expect = 1.6
Identities = 17/30 (56%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Query: 4 ESRDTTDLSPGG--TQEMEGIVIVKVEEED 31
ESR+ DL P +QE E + IVKVEEED
Sbjct: 5 ESREVIDLDPPAETSQEQEDLFIVKVEEED 34
>gi|151301228 formin binding protein 3 [Homo sapiens]
Length = 930
Score = 31.2 bits (69), Expect = 2.7
Identities = 33/157 (21%), Positives = 56/157 (35%), Gaps = 8/157 (5%)
Query: 251 KEISPSLMDVLKNAVKTVNFIKGSSLNSRLLEIFCSEIGVNHTHLLFHTEVRWLSQGKVL 310
KE S L+N K + + E+ L + +V + K
Sbjct: 434 KEAKESFQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEK 493
Query: 311 SRVYELRNEIYIFLVEKQSHLANIFEDDIWVTKLAYLSDIFGILNELSLKMQGKNNDIFQ 370
+ +LR + L ++AN+ W YL D + L+ K + +
Sbjct: 494 EQAKQLRKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALIC 553
Query: 371 YLEHILGF--------QKTLLLWQARLKSNRPSYYMF 399
+ EHI QK+LL + R + NR S+ +F
Sbjct: 554 FEEHIRALEKEEEEEKQKSLLRERRRQRKNRESFQIF 590
>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
Length = 3907
Score = 30.8 bits (68), Expect = 3.5
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 408 ENIINEDCLKEIKLEILLHLTSLSQTFNYYFPEEKFESLKENIWMKD-PFAFQNPESI-- 464
EN I +D K ++ + +H T +SQ F + K+++W K+ + E +
Sbjct: 776 ENSILKDEKKTLEDMLKIH-TPVSQEERLIFLDSIKSKSKDSVWEKEIEILIEENEDLKQ 834
Query: 465 --IELNLEPEEENELLQLSSSFTLKNYYKILSLSAFWIKIKDD 505
I+LN E E++ + NY ++ A +K+KDD
Sbjct: 835 QCIQLNEEIEKQRNTFSFAEKNFEVNYQELQEEYACLLKVKDD 877
>gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]
Length = 3899
Score = 30.8 bits (68), Expect = 3.5
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 408 ENIINEDCLKEIKLEILLHLTSLSQTFNYYFPEEKFESLKENIWMKD-PFAFQNPESI-- 464
EN I +D K ++ + +H T +SQ F + K+++W K+ + E +
Sbjct: 776 ENSILKDEKKTLEDMLKIH-TPVSQEERLIFLDSIKSKSKDSVWEKEIEILIEENEDLKQ 834
Query: 465 --IELNLEPEEENELLQLSSSFTLKNYYKILSLSAFWIKIKDD 505
I+LN E E++ + NY ++ A +K+KDD
Sbjct: 835 QCIQLNEEIEKQRNTFSFAEKNFEVNYQELQEEYACLLKVKDD 877
>gi|157671947 hypothetical protein LOC79974 isoform 2 [Homo sapiens]
Length = 783
Score = 30.0 bits (66), Expect = 6.0
Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 29/146 (19%)
Query: 341 VTKLAYLSDIFGILNELSLKMQGKNNDIFQYLEHILGFQKTLLLWQARLKSNRPSYYMFP 400
+ KL +++F + L K + FQ L +G+ +M+P
Sbjct: 331 IGKLLLAAEVFSETSTLGPKTFHRCRFCFQLLTFDIGYGS----------------FMYP 374
Query: 401 TLLQHIE----ENIINEDCLKEIKLEILLHLTSLSQTFNYYFPEEK----FESLKENIWM 452
+LQ E ++ N D + E LL+ TFN+ FP E F + + ++
Sbjct: 375 VVLQVHEHLNFQDYDNMDFEDQNTEEFLLN-----DTFNFLFPNESSLSIFSEIFQRLYR 429
Query: 453 KDPFAFQNPESIIELNLEPEEENELL 478
D F +N + + L EE N ++
Sbjct: 430 SDVFKGENYQKELNQCLSLEEINSIM 455
>gi|157671945 hypothetical protein LOC79974 isoform 1 [Homo sapiens]
Length = 1026
Score = 30.0 bits (66), Expect = 6.0
Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 29/146 (19%)
Query: 341 VTKLAYLSDIFGILNELSLKMQGKNNDIFQYLEHILGFQKTLLLWQARLKSNRPSYYMFP 400
+ KL +++F + L K + FQ L +G+ +M+P
Sbjct: 331 IGKLLLAAEVFSETSTLGPKTFHRCRFCFQLLTFDIGYGS----------------FMYP 374
Query: 401 TLLQHIE----ENIINEDCLKEIKLEILLHLTSLSQTFNYYFPEEK----FESLKENIWM 452
+LQ E ++ N D + E LL+ TFN+ FP E F + + ++
Sbjct: 375 VVLQVHEHLNFQDYDNMDFEDQNTEEFLLN-----DTFNFLFPNESSLSIFSEIFQRLYR 429
Query: 453 KDPFAFQNPESIIELNLEPEEENELL 478
D F +N + + L EE N ++
Sbjct: 430 SDVFKGENYQKELNQCLSLEEINSIM 455
>gi|194018476 TBC1 domain family, member 2B isoform b [Homo sapiens]
Length = 914
Score = 30.0 bits (66), Expect = 6.0
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Query: 433 TFNYY---FPEEKFESLKENIWMKDPFAFQNPESIIE--LNLEPEEENELLQLSSSFTLK 487
TFN++ F + + IW D F ++ P+ I L L +E E+L+L S ++
Sbjct: 828 TFNWFLVVFVDSVVSDILFKIW--DSFLYEGPKVIFRFALALFKYKEEEILKLQDSMSIF 885
Query: 488 NYYKILSLSAFWIKIKDDFPLLSRKS 513
Y + + + + D P RKS
Sbjct: 886 KYLRYFTRTILDARSGTDAPTTWRKS 911
>gi|214831601 general transcription factor IIH, polypeptide 1, 62kDa
[Homo sapiens]
Length = 548
Score = 29.6 bits (65), Expect = 7.8
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 12/88 (13%)
Query: 418 EIKLEILLHLTSLSQTFNYYFPEEKFESLKENIWMKDPFAFQNPESIIELNLEPEEENEL 477
+I+L+++LH T N++F E ++KE +KD P+ + N E EE+N +
Sbjct: 62 KIQLQLVLHA---GDTTNFHFSNES-TAVKERDAVKDLLQQLLPKFKRKANKELEEKNRM 117
Query: 478 LQLSSSFTLKNYYK------ILSLSAFW 499
LQ L YK ++S FW
Sbjct: 118 LQ--EDPVLFQLYKDLVVSQVISAEEFW 143
>gi|4885365 general transcription factor IIH, polypeptide 1, 62kDa
[Homo sapiens]
Length = 548
Score = 29.6 bits (65), Expect = 7.8
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 12/88 (13%)
Query: 418 EIKLEILLHLTSLSQTFNYYFPEEKFESLKENIWMKDPFAFQNPESIIELNLEPEEENEL 477
+I+L+++LH T N++F E ++KE +KD P+ + N E EE+N +
Sbjct: 62 KIQLQLVLHA---GDTTNFHFSNES-TAVKERDAVKDLLQQLLPKFKRKANKELEEKNRM 117
Query: 478 LQLSSSFTLKNYYK------ILSLSAFW 499
LQ L YK ++S FW
Sbjct: 118 LQ--EDPVLFQLYKDLVVSQVISAEEFW 143
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 29.6 bits (65), Expect = 7.8
Identities = 12/45 (26%), Positives = 25/45 (55%)
Query: 4 ESRDTTDLSPGGTQEMEGIVIVKVEEEDEEDHFQKERNKVESSPQ 48
E +++ SP +++ E +V + EEE+EE+ E + + P+
Sbjct: 1120 EFESSSESSPSSSEDEEEVVAREEEEEEEEEEMVAEESMASAGPE 1164
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.135 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,554,618
Number of Sequences: 37866
Number of extensions: 863175
Number of successful extensions: 2846
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 2795
Number of HSP's gapped (non-prelim): 32
length of query: 573
length of database: 18,247,518
effective HSP length: 108
effective length of query: 465
effective length of database: 14,157,990
effective search space: 6583465350
effective search space used: 6583465350
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.