Guide to the Human Genome
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Name: C7orf58 Sequence: fasta or formatted (1026aa) NCBI GI: 157671945
Description:

hypothetical protein LOC79974 isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {783aa} hypothetical protein LOC79974 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.3         34           3
 C cysteine            3.2         33           1
 D aspartate           3.2         33           2
 E glutamate           6.6         68           2
 F phenylalanine       5.8         60           2
 G glycine             5.8         60           2
 H histidine           3.5         36           1
 I isoleucine          5.6         57           2
 K lysine              6.2         64           3
 L leucine            10.9        112           3
 M methionine          1.8         18           1
 N asparagine          4.5         46           1
 P proline             5.8         59           2
 Q glutamine           6.0         62           2
 R arginine            4.6         47           3
 S serine              6.5         67           2
 T threonine           6.3         65           2
 V valine              5.9         61           2
 W tryptophan          1.3         13           1
 Y tyrosine            3.0         31           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC79974 isoform 1 
C7orf58               0.750   hypothetical protein LOC79974 isoform 2 
CASD1                 0.007   CAS1 domain containing 1 
KIAA1731              0.006   hypothetical protein LOC85459 
FAM55D                0.005   hypothetical protein LOC54827 isoform 1 
FAM55D                0.005   hypothetical protein LOC54827 isoform 2 
SNF8                  0.005   EAP30 subunit of ELL complex 
ZNF423                0.004   zinc finger protein 423 
GK5                   0.004   glycerol kinase 5 (putative) 
TTLL13                0.003   tubulin tyrosine ligase-like family, member 13 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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