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Search of human proteins with 21464125
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21464125 muscleblind-like 2 isoform 1 [Homo sapiens]
(367 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21464125 muscleblind-like 2 isoform 1 [Homo sapiens] 748 0.0
gi|46411180 muscleblind-like 2 isoform 3 [Homo sapiens] 658 0.0
gi|41281591 muscleblind-like 1 isoform a [Homo sapiens] 556 e-159
gi|46411164 muscleblind-like 1 isoform b [Homo sapiens] 525 e-149
gi|46411166 muscleblind-like 1 isoform c [Homo sapiens] 518 e-147
gi|19387844 muscleblind-like 3 isoform G [Homo sapiens] 514 e-146
gi|46411174 muscleblind-like 1 isoform g [Homo sapiens] 503 e-143
gi|30315649 muscleblind-like 3 isoform R [Homo sapiens] 457 e-129
gi|46411172 muscleblind-like 1 isoform f [Homo sapiens] 426 e-119
gi|46411170 muscleblind-like 1 isoform e [Homo sapiens] 331 7e-91
gi|46411168 muscleblind-like 1 isoform d [Homo sapiens] 299 2e-81
gi|155722994 zinc finger CCCH-type containing 3 [Homo sapiens] 47 2e-05
gi|14249452 zinc finger CCCH-type containing 10 [Homo sapiens] 44 3e-04
gi|193788659 cleavage and polyadenylation specific factor 4-like... 41 0.001
gi|91208418 transcription elongation regulator 1 isoform 2 [Homo... 40 0.003
gi|21327715 transcription elongation regulator 1 isoform 1 [Homo... 40 0.003
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 38 0.016
gi|4507961 zinc finger protein 36, C3H type, homolog [Homo sapiens] 37 0.037
gi|118766347 zinc finger CCCH-type domain containing 6 [Homo sap... 37 0.037
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 35 0.082
gi|125987603 cleavage and polyadenylation specific factor 4, 30k... 35 0.11
gi|5729939 cleavage and polyadenylation specific factor 4, 30kDa... 35 0.11
gi|40354216 sine oculis homeobox homolog 5 [Homo sapiens] 35 0.11
gi|53831995 splicing factor 3a, subunit 1, 120kDa isoform 2 [Hom... 35 0.14
gi|5032087 splicing factor 3a, subunit 1, 120kDa isoform 1 [Homo... 35 0.14
gi|4557317 annexin A11 [Homo sapiens] 34 0.18
gi|22165433 annexin A11 [Homo sapiens] 34 0.18
gi|22165431 annexin A11 [Homo sapiens] 34 0.18
gi|40538799 ataxin-1 ubiquitin-like interacting protein [Homo sa... 34 0.18
gi|117938768 GNAS complex locus alex [Homo sapiens] 34 0.24
>gi|21464125 muscleblind-like 2 isoform 1 [Homo sapiens]
Length = 367
Score = 748 bits (1931), Expect = 0.0
Identities = 367/367 (100%), Positives = 367/367 (100%)
Query: 1 MALNVAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGR 60
MALNVAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGR
Sbjct: 1 MALNVAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGR 60
Query: 61 CSRENCKYLHPPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQFMFPGTPLHPVPTFPVGP 120
CSRENCKYLHPPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQFMFPGTPLHPVPTFPVGP
Sbjct: 61 CSRENCKYLHPPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQFMFPGTPLHPVPTFPVGP 120
Query: 121 AIGTNTAISFAPYLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVPGSTATQKLLRTDKLE 180
AIGTNTAISFAPYLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVPGSTATQKLLRTDKLE
Sbjct: 121 AIGTNTAISFAPYLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVPGSTATQKLLRTDKLE 180
Query: 181 VCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYFHPPAHL 240
VCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYFHPPAHL
Sbjct: 181 VCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYFHPPAHL 240
Query: 241 QAKIKAAQHQANQAAVAAQAAAAAATVMAFPPGALHPLPKRQALEKSNGTSAVFNPSVLH 300
QAKIKAAQHQANQAAVAAQAAAAAATVMAFPPGALHPLPKRQALEKSNGTSAVFNPSVLH
Sbjct: 241 QAKIKAAQHQANQAAVAAQAAAAAATVMAFPPGALHPLPKRQALEKSNGTSAVFNPSVLH 300
Query: 301 YQQALTSAQLQQHAAFIPTGSVLCMTPATSIVPMMHSATSATVSAATTPATSVPFAATAT 360
YQQALTSAQLQQHAAFIPTGSVLCMTPATSIVPMMHSATSATVSAATTPATSVPFAATAT
Sbjct: 301 YQQALTSAQLQQHAAFIPTGSVLCMTPATSIVPMMHSATSATVSAATTPATSVPFAATAT 360
Query: 361 ANQIILK 367
ANQIILK
Sbjct: 361 ANQIILK 367
>gi|46411180 muscleblind-like 2 isoform 3 [Homo sapiens]
Length = 361
Score = 658 bits (1698), Expect = 0.0
Identities = 319/319 (100%), Positives = 319/319 (100%)
Query: 1 MALNVAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGR 60
MALNVAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGR
Sbjct: 1 MALNVAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGR 60
Query: 61 CSRENCKYLHPPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQFMFPGTPLHPVPTFPVGP 120
CSRENCKYLHPPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQFMFPGTPLHPVPTFPVGP
Sbjct: 61 CSRENCKYLHPPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQFMFPGTPLHPVPTFPVGP 120
Query: 121 AIGTNTAISFAPYLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVPGSTATQKLLRTDKLE 180
AIGTNTAISFAPYLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVPGSTATQKLLRTDKLE
Sbjct: 121 AIGTNTAISFAPYLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVPGSTATQKLLRTDKLE 180
Query: 181 VCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYFHPPAHL 240
VCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYFHPPAHL
Sbjct: 181 VCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYFHPPAHL 240
Query: 241 QAKIKAAQHQANQAAVAAQAAAAAATVMAFPPGALHPLPKRQALEKSNGTSAVFNPSVLH 300
QAKIKAAQHQANQAAVAAQAAAAAATVMAFPPGALHPLPKRQALEKSNGTSAVFNPSVLH
Sbjct: 241 QAKIKAAQHQANQAAVAAQAAAAAATVMAFPPGALHPLPKRQALEKSNGTSAVFNPSVLH 300
Query: 301 YQQALTSAQLQQHAAFIPT 319
YQQALTSAQLQQHAAFIPT
Sbjct: 301 YQQALTSAQLQQHAAFIPT 319
>gi|41281591 muscleblind-like 1 isoform a [Homo sapiens]
Length = 382
Score = 556 bits (1434), Expect = e-159
Identities = 281/370 (75%), Positives = 307/370 (82%), Gaps = 11/370 (2%)
Query: 1 MALNVAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGR 60
MA++V P+RDTKWLTLEVCR+FQRGTCSR D ECKFAHP KSCQVENGRVIACFDSLKGR
Sbjct: 1 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR 60
Query: 61 CSRENCKYLHPPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQF---MFPGTPLHPVPTFP 117
CSRENCKYLHPP HLKTQLEINGRNNLIQQK AMLAQQMQ M PG PL PVP F
Sbjct: 61 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKN-MAMLAQQMQLANAMMPGAPLQPVPMFS 119
Query: 118 VGPAIGTN-TAISFAPYLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVP--GSTATQKLL 174
V P++ TN +A +F PYL PV+P LVP EILPT P++V G+P V VP + A QKL+
Sbjct: 120 VAPSLATNASAAAFNPYLGPVSP--SLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLM 177
Query: 175 RTDKLEVCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYF 234
RTD+LEVCRE+QRGNC RGE DCRFAHPADSTMIDT+DNTVTVCMDYIKGRC REKCKYF
Sbjct: 178 RTDRLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYF 237
Query: 235 HPPAHLQAKIKAAQHQANQAAVAAQAAAAAATVMAFPPGALHPLPKRQALEKSNGTSAVF 294
HPPAHLQAKIKAAQ+Q NQAA AAQAAA AA M P L PLPKR ALEK+NG +AVF
Sbjct: 238 HPPAHLQAKIKAAQYQVNQAA-AAQAAATAA-AMGIPQAVLPPLPKRPALEKTNGATAVF 295
Query: 295 NPSVLHYQQALTSAQLQQHAAFIPTGSVLCMTPATSIVPMMHSATSATVSAATTPATSVP 354
N + YQQAL + QLQQH AF+P GS+LCMTPATS+VPM+H AT ATVSAATT ATSVP
Sbjct: 296 NTGIFQYQQALANMQLQQHTAFLPPGSILCMTPATSVVPMVHGATPATVSAATTSATSVP 355
Query: 355 FAATATANQI 364
FAATATANQI
Sbjct: 356 FAATATANQI 365
>gi|46411164 muscleblind-like 1 isoform b [Homo sapiens]
Length = 370
Score = 525 bits (1352), Expect = e-149
Identities = 271/370 (73%), Positives = 295/370 (79%), Gaps = 23/370 (6%)
Query: 1 MALNVAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGR 60
MA++V P+RDTKWLTLEVCR+FQRGTCSR D ECKFAHP KSCQVENGRVIACFDSLKGR
Sbjct: 1 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR 60
Query: 61 CSRENCKYLHPPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQF---MFPGTPLHPVPTFP 117
CSRENCKYLHPP HLKTQLEINGRNNLIQQK AMLAQQMQ M PG PL PVP F
Sbjct: 61 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKN-MAMLAQQMQLANAMMPGAPLQPVPMFS 119
Query: 118 VGPAIGTN-TAISFAPYLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVP--GSTATQKLL 174
V P++ TN +A +F PYL PV+P LVP EILPT P++V G+P V VP + A QKL+
Sbjct: 120 VAPSLATNASAAAFNPYLGPVSP--SLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLM 177
Query: 175 RTDKLEVCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYF 234
RTD+LEVCRE+QRGNC RGE DCRFAHPADSTMIDT+DNTVTVCMDYIKGRC REKCKYF
Sbjct: 178 RTDRLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYF 237
Query: 235 HPPAHLQAKIKAAQHQANQAAVAAQAAAAAATVMAFPPGALHPLPKRQALEKSNGTSAVF 294
HPPAHLQAKIKAAQ+Q NQAA AAQAAA AA M P L PLPKR ALEK+NG +AVF
Sbjct: 238 HPPAHLQAKIKAAQYQVNQAA-AAQAAATAA-AMGIPQAVLPPLPKRPALEKTNGATAVF 295
Query: 295 NPSVLHYQQALTSAQLQQHAAFIPTGSVLCMTPATSIVPMMHSATSATVSAATTPATSVP 354
N + YQQAL + QLQQH AF+P VPM+H AT ATVSAATT ATSVP
Sbjct: 296 NTGIFQYQQALANMQLQQHTAFLPP------------VPMVHGATPATVSAATTSATSVP 343
Query: 355 FAATATANQI 364
FAATATANQI
Sbjct: 344 FAATATANQI 353
>gi|46411166 muscleblind-like 1 isoform c [Homo sapiens]
Length = 388
Score = 518 bits (1334), Expect = e-147
Identities = 270/387 (69%), Positives = 296/387 (76%), Gaps = 39/387 (10%)
Query: 1 MALNVAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGR 60
MA++V P+RDTKWLTLEVCR+FQRGTCSR D ECKFAHP KSCQVENGRVIACFDSLKGR
Sbjct: 1 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR 60
Query: 61 CSRENCKYLHPPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQF---MFPGTPLHPVPTFP 117
CSRENCKYLHPP HLKTQLEINGRNNLIQQK AMLAQQMQ M PG PL PVP F
Sbjct: 61 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKN-MAMLAQQMQLANAMMPGAPLQPVPMFS 119
Query: 118 VGPAIGTN-TAISFAPYLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVP--GSTATQKLL 174
V P++ TN +A +F PYL PV+P LVP EILPT P++V G+P V VP + A QKL+
Sbjct: 120 VAPSLATNASAAAFNPYLGPVSP--SLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLM 177
Query: 175 RTDKLEVCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYF 234
RTD+LEVCRE+QRGNC RGE DCRFAHPADSTMIDT+DNTVTVCMDYIKGRC REKCKYF
Sbjct: 178 RTDRLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYF 237
Query: 235 HPPAHLQAKIKAAQHQANQAAVAAQAAAAAATV-----------------MAFPPGALHP 277
HPPAHLQAKIKAAQ+Q NQAA AAQAAA AA + + P L P
Sbjct: 238 HPPAHLQAKIKAAQYQVNQAA-AAQAAATAAAMTQSAVKSLKRPLEATFDLGIPQAVLPP 296
Query: 278 LPKRQALEKSNGTSAVFNPSVLHYQQALTSAQLQQHAAFIPTGSVLCMTPATSIVPMMHS 337
LPKR ALEK+NG +AVFN + YQQAL + QLQQH AF+P VPM+H
Sbjct: 297 LPKRPALEKTNGATAVFNTGIFQYQQALANMQLQQHTAFLPP------------VPMVHG 344
Query: 338 ATSATVSAATTPATSVPFAATATANQI 364
AT ATVSAATT ATSVPFAATATANQI
Sbjct: 345 ATPATVSAATTSATSVPFAATATANQI 371
>gi|19387844 muscleblind-like 3 isoform G [Homo sapiens]
Length = 354
Score = 514 bits (1323), Expect = e-146
Identities = 245/363 (67%), Positives = 289/363 (79%), Gaps = 13/363 (3%)
Query: 2 ALNVAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGRC 61
A+NVA +RDTKWLTLEVCR+FQRGTCSR+D +CKFAHPP+ C VENGRV+ACFDSLKGRC
Sbjct: 3 AVNVALIRDTKWLTLEVCREFQRGTCSRADADCKFAHPPRVCHVENGRVVACFDSLKGRC 62
Query: 62 SRENCKYLHPPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQFMFPGTPLHPVPTFPVGPA 121
+RENCKYLHPP HLKTQLEINGRNNLIQQKTAAAM AQQMQ M + + +FP+ P+
Sbjct: 63 TRENCKYLHPPPHLKTQLEINGRNNLIQQKTAAAMFAQQMQLMLQNAQMSSLGSFPMTPS 122
Query: 122 IGTNTAISFAPYLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVPGSTATQKLLRTDKLEV 181
I N ++F PY+ PG+GLVP E++P TPV++PG+PP+ +PG+ KL+R+DKLEV
Sbjct: 123 IPANPPMAFNPYIP--HPGMGLVPAELVPNTPVLIPGNPPLAMPGAVG-PKLMRSDKLEV 179
Query: 182 CREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYFHPPAHLQ 241
CREFQRGNC RGE DCR+AHP D++MI+ SDNTVT+CMDYIKGRC REKCKYFHPPAHLQ
Sbjct: 180 CREFQRGNCTRGENDCRYAHPTDASMIEASDNTVTICMDYIKGRCSREKCKYFHPPAHLQ 239
Query: 242 AKIKAAQHQANQAAVAAQAAAAAATVMAFPPGALHPLPKRQALEKSNGTSAVFNPSVLHY 301
A++KAA HQ N +AA+ MA PG L +PKR ALEK NG + VFNP+V H
Sbjct: 240 ARLKAAHHQMNH---------SAASAMALQPGTLQLIPKRSALEKPNGATPVFNPTVFHC 290
Query: 302 QQALTSAQLQQHAAFIPTGSVLCMTPATSIVPMMHSATSATVSAATTPATSVPFAATATA 361
QQALT+ QL Q AFIP G +LCM PA++IVPMMH AT TVSAATTPATSVPFAA T
Sbjct: 291 QQALTNLQLPQ-PAFIPAGPILCMAPASNIVPMMHGATPTTVSAATTPATSVPFAAPTTG 349
Query: 362 NQI 364
NQ+
Sbjct: 350 NQL 352
>gi|46411174 muscleblind-like 1 isoform g [Homo sapiens]
Length = 342
Score = 503 bits (1296), Expect = e-143
Identities = 252/337 (74%), Positives = 277/337 (82%), Gaps = 11/337 (3%)
Query: 1 MALNVAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGR 60
MA++V P+RDTKWLTLEVCR+FQRGTCSR D ECKFAHP KSCQVENGRVIACFDSLKGR
Sbjct: 1 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR 60
Query: 61 CSRENCKYLHPPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQF---MFPGTPLHPVPTFP 117
CSRENCKYLHPP HLKTQLEINGRNNLIQQK AMLAQQMQ M PG PL PVP F
Sbjct: 61 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKN-MAMLAQQMQLANAMMPGAPLQPVPMFS 119
Query: 118 VGPAIGTN-TAISFAPYLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVP--GSTATQKLL 174
V P++ TN +A +F PYL PV+P LVP EILPT P++V G+P V VP + A QKL+
Sbjct: 120 VAPSLATNASAAAFNPYLGPVSP--SLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLM 177
Query: 175 RTDKLEVCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYF 234
RTD+LEVCRE+QRGNC RGE DCRFAHPADSTMIDT+DNTVTVCMDYIKGRC REKCKYF
Sbjct: 178 RTDRLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYF 237
Query: 235 HPPAHLQAKIKAAQHQANQAAVAAQAAAAAATVMAFPPGALHPLPKRQALEKSNGTSAVF 294
HPPAHLQAKIKAAQ+Q NQAA AAQAAA AA M P L PLPKR ALEK+NG +AVF
Sbjct: 238 HPPAHLQAKIKAAQYQVNQAA-AAQAAATAA-AMGIPQAVLPPLPKRPALEKTNGATAVF 295
Query: 295 NPSVLHYQQALTSAQLQQHAAFIPTGSVLCMTPATSI 331
N + YQQAL + QLQQH AF+P GS+LCMTPATS+
Sbjct: 296 NTGIFQYQQALANMQLQQHTAFLPPGSILCMTPATSV 332
>gi|30315649 muscleblind-like 3 isoform R [Homo sapiens]
Length = 334
Score = 457 bits (1176), Expect = e-129
Identities = 224/363 (61%), Positives = 264/363 (72%), Gaps = 48/363 (13%)
Query: 2 ALNVAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGRC 61
A+NVA +RDTKWLTLEVCR+FQRGTCSR+D +CKFAHPP+ C VENGRV+ACFDSLKGRC
Sbjct: 3 AVNVALIRDTKWLTLEVCREFQRGTCSRADADCKFAHPPRVCHVENGRVVACFDSLKGRC 62
Query: 62 SRENCKYLHPPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQFMFPGTPLHPVPTFPVGPA 121
+RENCKYLHPP HLKTQLEINGRNNLIQQKTAAAM AQQMQ M + + +FP+ P+
Sbjct: 63 TRENCKYLHPPPHLKTQLEINGRNNLIQQKTAAAMFAQQMQLMLQNAQMSSLGSFPMTPS 122
Query: 122 IGTNTAISFAPYLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVPGSTATQKLLRTDKLEV 181
I N ++F PY+ PG+GLVP E++P TPV++PG+PP+ +PG+ KL+R+DKLEV
Sbjct: 123 IPANPPMAFNPYIP--HPGMGLVPAELVPNTPVLIPGNPPLAMPGAVG-PKLMRSDKLEV 179
Query: 182 CREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYFHPPAHLQ 241
CREFQRGNC RGE DCR+AHP D++MI+ SDNTVT+CMDYIKGRC REKCKYFHPPAHLQ
Sbjct: 180 CREFQRGNCTRGENDCRYAHPTDASMIEASDNTVTICMDYIKGRCSREKCKYFHPPAHLQ 239
Query: 242 AKIKAAQHQANQAAVAAQAAAAAATVMAFPPGALHPLPKRQALEKSNGTSAVFNPSVLHY 301
A++KAA HQ N +A +A
Sbjct: 240 ARLKAAHHQMNHSAASA------------------------------------------- 256
Query: 302 QQALTSAQLQQHAAFIPTGSVLCMTPATSIVPMMHSATSATVSAATTPATSVPFAATATA 361
ALT+ QL Q AFIP G +LCM PA++IVPMMH AT TVSAATTPATSVPFAA T
Sbjct: 257 -MALTNLQLPQ-PAFIPAGPILCMAPASNIVPMMHGATPTTVSAATTPATSVPFAAPTTG 314
Query: 362 NQI 364
NQI
Sbjct: 315 NQI 317
>gi|46411172 muscleblind-like 1 isoform f [Homo sapiens]
Length = 340
Score = 426 bits (1095), Expect = e-119
Identities = 220/313 (70%), Positives = 247/313 (78%), Gaps = 18/313 (5%)
Query: 1 MALNVAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGR 60
MA++V P+RDTKWLTLEVCR+FQRGTCSR D ECKFAHP KSCQVENGRVIACFDSLKGR
Sbjct: 1 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR 60
Query: 61 CSRENCKYLHPPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQF---MFPGTPLHPVPTFP 117
CSRENCKYLHPP HLKTQLEINGRNNLIQQK AMLAQQMQ M PG PL PVP F
Sbjct: 61 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKN-MAMLAQQMQLANAMMPGAPLQPVPMFS 119
Query: 118 VGPAIGTN-TAISFAPYLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVP--GSTATQKLL 174
V P++ TN +A +F PYL PV+P LVP EILPT P++V G+P V VP + A QKL+
Sbjct: 120 VAPSLATNASAAAFNPYLGPVSP--SLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLM 177
Query: 175 RTDKLEVCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYF 234
RTD+LEVCRE+QRGNC RGE DCRFAHPADSTMIDT+DNTVTVCMDYIKGRC REKCKYF
Sbjct: 178 RTDRLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYF 237
Query: 235 HPPAHLQAKIKAAQHQANQAAVAAQAAAAAATVMAFPPGALHPL-PKRQ-------ALEK 286
HPPAHLQAKIKAAQ+Q NQAA AAQAAA AA + + PL P++Q +L++
Sbjct: 238 HPPAHLQAKIKAAQYQVNQAA-AAQAAATAAAMFPWCTVLRQPLCPQQQHLPQVFPSLQQ 296
Query: 287 SNGTSAVFNPSVL 299
TS + + S L
Sbjct: 297 PQPTSPILDASTL 309
Score = 104 bits (260), Expect = 1e-22
Identities = 61/160 (38%), Positives = 87/160 (54%), Gaps = 14/160 (8%)
Query: 179 LEVCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYFHPPA 238
LEVCREFQRG C+R +T+C+FAHP+ S ++ + V C D +KGRC RE CKY HPP
Sbjct: 16 LEVCREFQRGTCSRPDTECKFAHPSKSCQVE--NGRVIACFDSLKGRCSRENCKYLHPPP 73
Query: 239 HLQAKIKAAQH-----QANQAAVAAQAAAAAATVMAFPPGA-LHPLPKRQALEK--SNGT 290
HL+ +++ Q N A +A Q A A + PGA L P+P +N +
Sbjct: 74 HLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMM----PGAPLQPVPMFSVAPSLATNAS 129
Query: 291 SAVFNPSVLHYQQALTSAQLQQHAAFIPTGSVLCMTPATS 330
+A FNP + +L A++ A + TG+ PA +
Sbjct: 130 AAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAA 169
>gi|46411170 muscleblind-like 1 isoform e [Homo sapiens]
Length = 314
Score = 331 bits (848), Expect = 7e-91
Identities = 190/364 (52%), Positives = 218/364 (59%), Gaps = 67/364 (18%)
Query: 1 MALNVAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGR 60
MA++V P+RDTKWLTLEVCR+FQRGTCSR D E
Sbjct: 1 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTE--------------------------- 33
Query: 61 CSRENCKYLHPPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQFMFPGTPLHPVPTFPVGP 120
CK+ HP + + NGR + ++ LHP P
Sbjct: 34 -----CKFAHPSKSCQVE---NGRVIACFDSLKGRCSRENCKY------LHPPPHLKTQL 79
Query: 121 AIGTNTAISFAPYLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVPGSTATQKLLRTDKLE 180
I + +A + + L ++PG+P V
Sbjct: 80 EINGRNNLIQQKNMAMLAQQMQLANA--------MMPGAPLQPV---------------- 115
Query: 181 VCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYFHPPAHL 240
VCRE+QRGNC RGE DCRFAHPADSTMIDT+DNTVTVCMDYIKGRC REKCKYFHPPAHL
Sbjct: 116 VCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPPAHL 175
Query: 241 QAKIKAAQHQANQAAVAAQAAAAAATVMAFPPGALHPLPKRQALEKSNGTSAVFNPSVLH 300
QAKIKAAQ+Q NQAA AAQAAA AA M P L PLPKR ALEK+NG +AVFN +
Sbjct: 176 QAKIKAAQYQVNQAA-AAQAAATAA-AMGIPQAVLPPLPKRPALEKTNGATAVFNTGIFQ 233
Query: 301 YQQALTSAQLQQHAAFIPTGSVLCMTPATSIVPMMHSATSATVSAATTPATSVPFAATAT 360
YQQAL + QLQQH AF+P GS+LCMTPATS+VPM+H AT ATVSAATT ATSVPFAATAT
Sbjct: 234 YQQALANMQLQQHTAFLPPGSILCMTPATSVVPMVHGATPATVSAATTSATSVPFAATAT 293
Query: 361 ANQI 364
ANQI
Sbjct: 294 ANQI 297
Score = 38.1 bits (87), Expect = 0.013
Identities = 42/158 (26%), Positives = 61/158 (38%), Gaps = 20/158 (12%)
Query: 10 DTKWLTLEVCRQFQRGTCSRSDEECKFAHPP-------KSCQVENGRVIACFDSLKGRCS 62
DT T+ VC + +G CSR E+CK+ HPP K+ Q + + A + +
Sbjct: 144 DTNDNTVTVCMDYIKGRCSR--EKCKYFHPPAHLQAKIKAAQYQVNQAAAA-QAAATAAA 200
Query: 63 RENCKYLHPPTHLKTQLE-INGRNNLI-------QQKTAAAMLAQQMQFMFPGTPLHPVP 114
+ + PP + LE NG + QQ A L Q F+ PG+ L P
Sbjct: 201 MGIPQAVLPPLPKRPALEKTNGATAVFNTGIFQYQQALANMQLQQHTAFLPPGSILCMTP 260
Query: 115 TFPVGPAI--GTNTAISFAPYLAPVTPGVGLVPTEILP 150
V P + T +S A A P +P
Sbjct: 261 ATSVVPMVHGATPATVSAATTSATSVPFAATATANQIP 298
>gi|46411168 muscleblind-like 1 isoform d [Homo sapiens]
Length = 302
Score = 299 bits (766), Expect = 2e-81
Identities = 180/364 (49%), Positives = 206/364 (56%), Gaps = 79/364 (21%)
Query: 1 MALNVAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGR 60
MA++V P+RDTKWLTLEVCR+FQRGTCSR D E
Sbjct: 1 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTE--------------------------- 33
Query: 61 CSRENCKYLHPPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQFMFPGTPLHPVPTFPVGP 120
CK+ HP + + NGR + ++ LHP P
Sbjct: 34 -----CKFAHPSKSCQVE---NGRVIACFDSLKGRCSRENCKY------LHPPPHLKTQL 79
Query: 121 AIGTNTAISFAPYLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVPGSTATQKLLRTDKLE 180
I + +A + + L ++PG+P V
Sbjct: 80 EINGRNNLIQQKNMAMLAQQMQLANA--------MMPGAPLQPV---------------- 115
Query: 181 VCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYFHPPAHL 240
VCRE+QRGNC RGE DCRFAHPADSTMIDT+DNTVTVCMDYIKGRC REKCKYFHPPAHL
Sbjct: 116 VCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPPAHL 175
Query: 241 QAKIKAAQHQANQAAVAAQAAAAAATVMAFPPGALHPLPKRQALEKSNGTSAVFNPSVLH 300
QAKIKAAQ+Q NQAA AAQAAA AA M P L PLPKR ALEK+NG +AVFN +
Sbjct: 176 QAKIKAAQYQVNQAA-AAQAAATAA-AMGIPQAVLPPLPKRPALEKTNGATAVFNTGIFQ 233
Query: 301 YQQALTSAQLQQHAAFIPTGSVLCMTPATSIVPMMHSATSATVSAATTPATSVPFAATAT 360
YQQAL + QLQQH AF+P VPM+H AT ATVSAATT ATSVPFAATAT
Sbjct: 234 YQQALANMQLQQHTAFLPP------------VPMVHGATPATVSAATTSATSVPFAATAT 281
Query: 361 ANQI 364
ANQI
Sbjct: 282 ANQI 285
>gi|155722994 zinc finger CCCH-type containing 3 [Homo sapiens]
Length = 948
Score = 47.4 bits (111), Expect = 2e-05
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 18 VCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGRCSRENCKYLH 70
VC +F RGTC ++D C F+H V ++ C LKG CS NC Y H
Sbjct: 699 VCTRFVRGTCKKTDGTCPFSH-----HVSKEKMPVCSYFLKGICSNSNCPYSH 746
Score = 42.4 bits (98), Expect = 7e-04
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 7/68 (10%)
Query: 177 DKLEVCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYFHP 236
+K+ VC F RG C + + C F+H S + VC ++KG C C Y H
Sbjct: 695 EKVAVCTRFVRGTCKKTDGTCPFSH-------HVSKEKMPVCSYFLKGICSNSNCPYSHV 747
Query: 237 PAHLQAKI 244
+A++
Sbjct: 748 YVSRKAEV 755
Score = 30.4 bits (67), Expect = 2.6
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 8/56 (14%)
Query: 16 LEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGRCS-RENCKYLH 70
+ VC F +G CS S+ C ++H S + E C D LKG C CK H
Sbjct: 726 MPVCSYFLKGICSNSN--CPYSHVYVSRKAE-----VCSDFLKGYCPLGAKCKKKH 774
>gi|14249452 zinc finger CCCH-type containing 10 [Homo sapiens]
Length = 434
Score = 43.5 bits (101), Expect = 3e-04
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 18 VCRQFQRGTCSRSDEECKFAHPPKS----CQVENGRVIACFDSLKGRCSRENCKYLH 70
+CR F R C R + C++ HP S V I C D CSR NC+++H
Sbjct: 41 ICRDFLRNVCKRG-KRCRYRHPDMSEVSNLGVSKNEFIFCHDFQNKECSRPNCRFIH 96
Score = 43.5 bits (101), Expect = 3e-04
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 181 VCREFQRGNCARGETDCRFAHP--ADSTMIDTSDNTVTVCMDYIKGRCMREKCKYFH 235
+CR+F R C RG+ CR+ HP ++ + + S N C D+ C R C++ H
Sbjct: 41 ICRDFLRNVCKRGKR-CRYRHPDMSEVSNLGVSKNEFIFCHDFQNKECSRPNCRFIH 96
Score = 32.3 bits (72), Expect = 0.69
Identities = 23/85 (27%), Positives = 31/85 (36%), Gaps = 36/85 (42%)
Query: 182 CREFQRGNCARGETDCRFAH------------------------------PADSTMIDTS 211
C +FQ C+R +CRF H PAD +
Sbjct: 79 CHDFQNKECSR--PNCRFIHGSKEDEDGYKKTGELPPRLRQKVAAGLGLSPAD---LPNG 133
Query: 212 DNTVTVCMDYIKGRCMR-EKCKYFH 235
V +C D++KG C R KCK+ H
Sbjct: 134 KEEVPICRDFLKGDCQRGAKCKFRH 158
Score = 29.6 bits (65), Expect = 4.5
Identities = 10/25 (40%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Query: 177 DKLEVCREFQRGNCARGETDCRFAH 201
+++ +CR+F +G+C RG C+F H
Sbjct: 135 EEVPICRDFLKGDCQRG-AKCKFRH 158
>gi|193788659 cleavage and polyadenylation specific factor 4-like
[Homo sapiens]
Length = 179
Score = 41.2 bits (95), Expect = 0.001
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 5 VAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIAC-FDSLKGRCSR 63
+ P R + + VC+ + RG C + D CKF H Q + R+ C F S G CS
Sbjct: 54 LCPFRHDRGEKMVVCKHWLRGLCKKGDH-CKFLH-----QYDLTRMPECYFYSKFGDCSN 107
Query: 64 ENCKYLHPPTHLKTQ 78
+ C +LH K+Q
Sbjct: 108 KECSFLHVKPAFKSQ 122
Score = 37.0 bits (84), Expect = 0.028
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 9/62 (14%)
Query: 175 RTDKLEVCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIK-GRCMREKCKY 233
R +K+ VC+ + RG C +G+ C+F H D T + C Y K G C ++C +
Sbjct: 61 RGEKMVVCKHWLRGLCKKGD-HCKFLHQYDLTRMPE-------CYFYSKFGDCSNKECSF 112
Query: 234 FH 235
H
Sbjct: 113 LH 114
>gi|91208418 transcription elongation regulator 1 isoform 2 [Homo
sapiens]
Length = 1077
Score = 40.4 bits (93), Expect = 0.003
Identities = 69/284 (24%), Positives = 103/284 (36%), Gaps = 60/284 (21%)
Query: 104 MFPGTPLHPVPTFPVGPAIGTNTAISFAPYLAPVTPGVGLVPT----------------E 147
M G P P P F P F P + P+ P G+ P
Sbjct: 55 MMRGPPPPPRPPFGRPP---------FDPNMPPMPPPGGIPPPMGPPHLQRPPFMPPPMS 105
Query: 148 ILPTTPVIV--PGSPPVTVPGSTA---TQKLLRTDKLEVCREFQRGNCARGETDCRFAHP 202
+P P ++ PG PPVT PG+ A T+++ +K + + R + + P
Sbjct: 106 SMPPPPGMMFPPGMPPVTAPGTPALPPTEEIWVENKTPDGKVYYYNARTR---ESAWTKP 162
Query: 203 ADSTMIDTSDNTVTVCMDYIKGRCMREKCKYFHPPAHLQAKIKA-AQHQANQAAVAAQAA 261
+I S+ T + A QA+ +A AQ QA A A A
Sbjct: 163 DGVKVIQQSELTPMLAAQ-----------AQVQAQAQAQAQAQAQAQAQAQAQAQAQAQA 211
Query: 262 AAAATVMAFPPGALHPLPKRQALEKSNGTSAVFNPSVLHYQQALTSAQLQQHA--AFIPT 319
A A A + QA ++ + V QA AQ+Q A A PT
Sbjct: 212 QAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQV---------QAQVQAQVQAQAVGASTPT 262
Query: 320 GSVLCMTPATSIVPMMHSATSATVSAATTPATSVPFAATATANQ 363
S +PA ++ S+T ++ ++ TT ATSV + Q
Sbjct: 263 TS----SPAPAVSTSTSSSTPSSTTSTTTTATSVAQTVSTPTTQ 302
>gi|21327715 transcription elongation regulator 1 isoform 1 [Homo
sapiens]
Length = 1098
Score = 40.4 bits (93), Expect = 0.003
Identities = 69/284 (24%), Positives = 103/284 (36%), Gaps = 60/284 (21%)
Query: 104 MFPGTPLHPVPTFPVGPAIGTNTAISFAPYLAPVTPGVGLVPT----------------E 147
M G P P P F P F P + P+ P G+ P
Sbjct: 55 MMRGPPPPPRPPFGRPP---------FDPNMPPMPPPGGIPPPMGPPHLQRPPFMPPPMS 105
Query: 148 ILPTTPVIV--PGSPPVTVPGSTA---TQKLLRTDKLEVCREFQRGNCARGETDCRFAHP 202
+P P ++ PG PPVT PG+ A T+++ +K + + R + + P
Sbjct: 106 SMPPPPGMMFPPGMPPVTAPGTPALPPTEEIWVENKTPDGKVYYYNARTR---ESAWTKP 162
Query: 203 ADSTMIDTSDNTVTVCMDYIKGRCMREKCKYFHPPAHLQAKIKA-AQHQANQAAVAAQAA 261
+I S+ T + A QA+ +A AQ QA A A A
Sbjct: 163 DGVKVIQQSELTPMLAAQ-----------AQVQAQAQAQAQAQAQAQAQAQAQAQAQAQA 211
Query: 262 AAAATVMAFPPGALHPLPKRQALEKSNGTSAVFNPSVLHYQQALTSAQLQQHA--AFIPT 319
A A A + QA ++ + V QA AQ+Q A A PT
Sbjct: 212 QAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQV---------QAQVQAQVQAQAVGASTPT 262
Query: 320 GSVLCMTPATSIVPMMHSATSATVSAATTPATSVPFAATATANQ 363
S +PA ++ S+T ++ ++ TT ATSV + Q
Sbjct: 263 TS----SPAPAVSTSTSSSTPSSTTSTTTTATSVAQTVSTPTTQ 302
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 37.7 bits (86), Expect = 0.016
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Query: 251 ANQAAVAAQAAAAAATVMAFPPGALHPLPKRQALEKSNGTSAVFNPSVLHYQQALTSAQL 310
A + A Q A ++A+V PP A PLP + TSA P+ L A TSA +
Sbjct: 1730 AKKQATGIQQAQSSASV---PPLASAPLPPSTSASVPASTSAPL-PATLTPVPASTSAPV 1785
Query: 311 QQHAAFIPTGSVLCMTPATSIVPMMHSAT-SATVSAATTPATSVPFAATATA 361
S PA+ + P+ SA+ SA+V A+T+ A +A A+A
Sbjct: 1786 PASTLAPVLASTSAPVPASPLAPVSASASVSASVPASTSAAAITSSSAPASA 1837
Score = 30.0 bits (66), Expect = 3.4
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 15/109 (13%)
Query: 254 AAVAAQAAAAAATVMAFPPGALHPLPKRQALEKSNGTSAVFNPSVLHYQQALTSAQLQQH 313
A+V A +AAA T + P A P P ++ + + + S+ AL S
Sbjct: 1817 ASVPASTSAAAITSSSAPASAPAPTPILASVSTPASVTILASASIPILASALASTS---- 1872
Query: 314 AAFIPTGSVLCMTPATSIVPMMHSATSATVSAATTPATSVPFA-ATATA 361
PT + +PA ++ +A A+ P SVP A A+A+A
Sbjct: 1873 ---APTPAPAASSPAAPVI-------TAPTIPASAPTASVPLAPASASA 1911
>gi|4507961 zinc finger protein 36, C3H type, homolog [Homo sapiens]
Length = 326
Score = 36.6 bits (83), Expect = 0.037
Identities = 41/158 (25%), Positives = 64/158 (40%), Gaps = 22/158 (13%)
Query: 17 EVCRQFQRGTCSRSDEECKFAHPPKSCQVENG----RVIACFD-SLKGRCS-RENCKYLH 70
E+CR F R +C+FAH + N + C L+GRC C ++H
Sbjct: 107 ELCRTFSESGRCRYGAKCQFAHGLGELRQANRHPKYKTELCHKFYLQGRCPYGSRCHFIH 166
Query: 71 PPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQFMFPGTPLHPVPTFPVGPAIGTNTAISF 130
P+ L G +++Q + + L G P P GP++ ++ SF
Sbjct: 167 NPSE---DLAAPGHPPVLRQSISFSGLPS-------GRRTSPPPPGLAGPSLSSS---SF 213
Query: 131 APYLAPVTPG-VGLVPT--EILPTTPVIVPGSPPVTVP 165
+P +P PG + L P+ P TP+ PV P
Sbjct: 214 SPSSSPPPPGDLPLSPSAFSAAPGTPLARRDPTPVCCP 251
Score = 33.9 bits (76), Expect = 0.24
Identities = 29/99 (29%), Positives = 37/99 (37%), Gaps = 7/99 (7%)
Query: 145 PTEILPTTPVIVPG-SPPVTVPGSTATQKLLRTDKLEVCREFQRGNCARGETDCRFAHPA 203
P P P + P SP T P TAT K E+CR F R C+FAH
Sbjct: 73 PPGFAPLAPRLGPELSPSPTSP--TATSTTPSRYKTELCRTFSESGRCRYGAKCQFAHGL 130
Query: 204 DSTMIDTSD---NTVTVCMDYIKGRC-MREKCKYFHPPA 238
T Y++GRC +C + H P+
Sbjct: 131 GELRQANRHPKYKTELCHKFYLQGRCPYGSRCHFIHNPS 169
>gi|118766347 zinc finger CCCH-type domain containing 6 [Homo
sapiens]
Length = 1189
Score = 36.6 bits (83), Expect = 0.037
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 6/55 (10%)
Query: 17 EVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGRCSR-ENCKYLH 70
++C+ F G C + D +CKF H ++E + I C L+G C++ ENC Y+H
Sbjct: 276 QICKYFLEGRCIKGD-QCKFDH---DAELEKRKEI-CKFYLQGYCTKGENCIYMH 325
Score = 36.6 bits (83), Expect = 0.037
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
Query: 180 EVCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMR-EKCKYFH 235
++C+ F G C +G+ C+F H A+ + +C Y++G C + E C Y H
Sbjct: 276 QICKYFLEGRCIKGD-QCKFDHDAE------LEKRKEICKFYLQGYCTKGENCIYMH 325
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
sapiens]
Length = 1636
Score = 35.4 bits (80), Expect = 0.082
Identities = 36/129 (27%), Positives = 43/129 (33%), Gaps = 20/129 (15%)
Query: 71 PPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQFMFPGTPLHPVPTFPVGPAIGTNTAISF 130
PP L TQL + + + A + F PG P P P GPA T
Sbjct: 1010 PPPPLHTQLYPGPAQDPLPAHSGA------LPFPSPGPPQPPHPPLAYGPAPSTRP---M 1060
Query: 131 APYLAPVT-----------PGVGLVPTEILPTTPVIVPGSPPVTVPGSTATQKLLRTDKL 179
P AP+T P LVP+ P VP PP P + D L
Sbjct: 1061 GPQAAPLTIRGPSSAGQSTPSPHLVPSPAPSPGPGPVPPRPPAAEPPPCLRRGAAAADLL 1120
Query: 180 EVCREFQRG 188
E Q G
Sbjct: 1121 SSSPESQHG 1129
>gi|125987603 cleavage and polyadenylation specific factor 4, 30kDa
isoform 2 [Homo sapiens]
Length = 244
Score = 35.0 bits (79), Expect = 0.11
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 5 VAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIAC-FDSLKGRCSR 63
+ P R VC+ + RG C + D+ C+F H + + ++ C F S G CS
Sbjct: 54 MCPFRHISGEKTVVCKHWLRGLCKKGDQ-CEFLH-----EYDMTKMPECYFYSKFGECSN 107
Query: 64 ENCKYLH 70
+ C +LH
Sbjct: 108 KECPFLH 114
Score = 35.0 bits (79), Expect = 0.11
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 9/60 (15%)
Query: 177 DKLEVCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIK-GRCMREKCKYFH 235
+K VC+ + RG C +G+ C F H D T + C Y K G C ++C + H
Sbjct: 63 EKTVVCKHWLRGLCKKGD-QCEFLHEYDMTKMPE-------CYFYSKFGECSNKECPFLH 114
>gi|5729939 cleavage and polyadenylation specific factor 4, 30kDa
isoform 1 [Homo sapiens]
Length = 269
Score = 35.0 bits (79), Expect = 0.11
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 5 VAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIAC-FDSLKGRCSR 63
+ P R VC+ + RG C + D+ C+F H + + ++ C F S G CS
Sbjct: 54 MCPFRHISGEKTVVCKHWLRGLCKKGDQ-CEFLH-----EYDMTKMPECYFYSKFGECSN 107
Query: 64 ENCKYLH 70
+ C +LH
Sbjct: 108 KECPFLH 114
Score = 35.0 bits (79), Expect = 0.11
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 9/60 (15%)
Query: 177 DKLEVCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIK-GRCMREKCKYFH 235
+K VC+ + RG C +G+ C F H D T + C Y K G C ++C + H
Sbjct: 63 EKTVVCKHWLRGLCKKGD-QCEFLHEYDMTKMPE-------CYFYSKFGECSNKECPFLH 114
>gi|40354216 sine oculis homeobox homolog 5 [Homo sapiens]
Length = 739
Score = 35.0 bits (79), Expect = 0.11
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 9/73 (12%)
Query: 106 PGTPLHPVPTFPVGPAIGTNTAISFAPYLAPVTPG----VGLVPTEILPTTPVIVPGSPP 161
PG P TFP+ P G A++ AP + P++P GL PT L P +VP S
Sbjct: 430 PGPPT--AATFPLPP--GPVPAVA-APQVVPLSPPPGYPTGLSPTSPLLNLPQVVPTSQV 484
Query: 162 VTVPGSTATQKLL 174
VT+P + +LL
Sbjct: 485 VTLPQAVGPLQLL 497
>gi|53831995 splicing factor 3a, subunit 1, 120kDa isoform 2 [Homo
sapiens]
Length = 728
Score = 34.7 bits (78), Expect = 0.14
Identities = 26/92 (28%), Positives = 36/92 (39%), Gaps = 8/92 (8%)
Query: 106 PGTPLHPVPTFPVGPAIGTNTAISFAPYLAPVTPGVGLVPTEILPTTPV--------IVP 157
PG+ + P+P P I AP + P +VPT +P PV + P
Sbjct: 545 PGSVIAPMPPIIHAPRINVVPMPPSAPPIMAPRPPPMIVPTAFVPAPPVAPVPAPAPMPP 604
Query: 158 GSPPVTVPGSTATQKLLRTDKLEVCREFQRGN 189
PP + ++KL D L EF R N
Sbjct: 605 VHPPPPMEDEPTSKKLKTEDSLMPEEEFLRRN 636
>gi|5032087 splicing factor 3a, subunit 1, 120kDa isoform 1 [Homo
sapiens]
Length = 793
Score = 34.7 bits (78), Expect = 0.14
Identities = 26/92 (28%), Positives = 36/92 (39%), Gaps = 8/92 (8%)
Query: 106 PGTPLHPVPTFPVGPAIGTNTAISFAPYLAPVTPGVGLVPTEILPTTPV--------IVP 157
PG+ + P+P P I AP + P +VPT +P PV + P
Sbjct: 610 PGSVIAPMPPIIHAPRINVVPMPPSAPPIMAPRPPPMIVPTAFVPAPPVAPVPAPAPMPP 669
Query: 158 GSPPVTVPGSTATQKLLRTDKLEVCREFQRGN 189
PP + ++KL D L EF R N
Sbjct: 670 VHPPPPMEDEPTSKKLKTEDSLMPEEEFLRRN 701
>gi|4557317 annexin A11 [Homo sapiens]
Length = 505
Score = 34.3 bits (77), Expect = 0.18
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 9/70 (12%)
Query: 106 PGTPLHPVPTFPVGPAIGTNTAI---SFAPYLAPVTPGVGLVPTEILPT------TPVIV 156
P + PVP + + P G N S+ PY PG + P P PV
Sbjct: 93 PPSAQQPVPPYGMYPPPGGNPPSRMPSYPPYPGAPVPGQPMPPPGQQPPGAYPGQPPVTY 152
Query: 157 PGSPPVTVPG 166
PG PPV +PG
Sbjct: 153 PGQPPVPLPG 162
>gi|22165433 annexin A11 [Homo sapiens]
Length = 505
Score = 34.3 bits (77), Expect = 0.18
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 9/70 (12%)
Query: 106 PGTPLHPVPTFPVGPAIGTNTAI---SFAPYLAPVTPGVGLVPTEILPT------TPVIV 156
P + PVP + + P G N S+ PY PG + P P PV
Sbjct: 93 PPSAQQPVPPYGMYPPPGGNPPSRMPSYPPYPGAPVPGQPMPPPGQQPPGAYPGQPPVTY 152
Query: 157 PGSPPVTVPG 166
PG PPV +PG
Sbjct: 153 PGQPPVPLPG 162
>gi|22165431 annexin A11 [Homo sapiens]
Length = 505
Score = 34.3 bits (77), Expect = 0.18
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 9/70 (12%)
Query: 106 PGTPLHPVPTFPVGPAIGTNTAI---SFAPYLAPVTPGVGLVPTEILPT------TPVIV 156
P + PVP + + P G N S+ PY PG + P P PV
Sbjct: 93 PPSAQQPVPPYGMYPPPGGNPPSRMPSYPPYPGAPVPGQPMPPPGQQPPGAYPGQPPVTY 152
Query: 157 PGSPPVTVPG 166
PG PPV +PG
Sbjct: 153 PGQPPVPLPG 162
>gi|40538799 ataxin-1 ubiquitin-like interacting protein [Homo
sapiens]
Length = 601
Score = 34.3 bits (77), Expect = 0.18
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Query: 282 QALEKSNGTSAVFNP----SVLHYQQALTSAQLQQHAAFIPTGSV-LCMTPATSIVPMMH 336
Q ++ S + NP ++L QQ L + Q + GS + TPA S
Sbjct: 449 QQMQNPESLSILTNPRAMQALLQIQQGLQTLQTEAPGLVPSLGSFGISRTPAPSAGSNAG 508
Query: 337 SATSATVSAATTPATSVPFAATATANQII 365
S A S+ TPATS P A++ Q++
Sbjct: 509 STPEAPTSSPATPATSSPTGASSAQQQLM 537
>gi|117938768 GNAS complex locus alex [Homo sapiens]
Length = 626
Score = 33.9 bits (76), Expect = 0.24
Identities = 23/76 (30%), Positives = 27/76 (35%), Gaps = 4/76 (5%)
Query: 99 QQMQFMFPGTPLHPVPTFPVGPAIGTNTAISFAPYLAPVTPGVGLVPTEILPTTPVIVPG 158
Q + PG PL P P G T P L P P + LP P+ PG
Sbjct: 323 QPQRIPLPGQPLQPQPILTPGQPQKIPTPGQHQPILTPGHSQPIPTPGQPLPPQPIPTPG 382
Query: 159 SP----PVTVPGSTAT 170
P P+ PG T
Sbjct: 383 RPLTPQPIPTPGRPLT 398
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.129 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,822,029
Number of Sequences: 37866
Number of extensions: 775245
Number of successful extensions: 4346
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 153
Number of HSP's that attempted gapping in prelim test: 3672
Number of HSP's gapped (non-prelim): 648
length of query: 367
length of database: 18,247,518
effective HSP length: 104
effective length of query: 263
effective length of database: 14,309,454
effective search space: 3763386402
effective search space used: 3763386402
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.