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Search of human proteins with 21450816
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21450816 uracil phosphoribosyltransferase (FUR1) homolog
[Homo sapiens]
(309 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21450816 uracil phosphoribosyltransferase (FUR1) homolog [Hom... 620 e-178
gi|57863312 uridine-cytidine kinase 1-like 1 [Homo sapiens] 154 1e-37
gi|22748877 basic helix-loop-helix domain containing, class B, 5... 33 0.25
gi|47933339 RNA binding motif protein 15 [Homo sapiens] 30 2.1
gi|229892308 shugoshin-like 2 isoform 2 [Homo sapiens] 30 2.7
gi|229892306 shugoshin-like 2 isoform 1 [Homo sapiens] 30 2.7
gi|229892197 shugoshin-like 2 isoform 3 [Homo sapiens] 30 2.7
gi|187761373 ariadne ubiquitin-conjugating enzyme E2 binding pro... 30 2.7
gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo sa... 29 4.6
gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo s... 29 4.6
gi|134031945 SCO-spondin [Homo sapiens] 29 4.6
gi|148839376 PWWP domain containing 2 isoform 1 [Homo sapiens] 29 4.6
gi|148839311 PWWP domain containing 2 isoform 2 [Homo sapiens] 29 4.6
gi|57864582 hornerin [Homo sapiens] 29 6.0
gi|94536811 NEDD4-like ubiquitin-protein ligase 1 [Homo sapiens] 29 6.0
gi|13786123 HMG-box transcription factor TCF-3 [Homo sapiens] 28 7.9
gi|186928829 dermokine isoform 4 precursor [Homo sapiens] 28 7.9
gi|186928827 dermokine isoform 5 precursor [Homo sapiens] 28 7.9
gi|186928825 dermokine isoform 3 precursor [Homo sapiens] 28 7.9
gi|33504489 dermokine isoform 2 precursor [Homo sapiens] 28 7.9
gi|42822876 hypothetical protein LOC286343 [Homo sapiens] 28 7.9
>gi|21450816 uracil phosphoribosyltransferase (FUR1) homolog [Homo
sapiens]
Length = 309
Score = 620 bits (1599), Expect = e-178
Identities = 309/309 (100%), Positives = 309/309 (100%)
Query: 1 MATELQCPDSMPCHNQQVNSASTPSPEQLRPGDLILDHAGGNRASRAKVILLTGYAHSSL 60
MATELQCPDSMPCHNQQVNSASTPSPEQLRPGDLILDHAGGNRASRAKVILLTGYAHSSL
Sbjct: 1 MATELQCPDSMPCHNQQVNSASTPSPEQLRPGDLILDHAGGNRASRAKVILLTGYAHSSL 60
Query: 61 PAELDSGACGGSSLNSEGNSGSGDSSSYDAPAGNSFLEDCELSRQIGAQLKLLPMNDQIR 120
PAELDSGACGGSSLNSEGNSGSGDSSSYDAPAGNSFLEDCELSRQIGAQLKLLPMNDQIR
Sbjct: 61 PAELDSGACGGSSLNSEGNSGSGDSSSYDAPAGNSFLEDCELSRQIGAQLKLLPMNDQIR 120
Query: 121 ELQTIIRDKTASRGDFMFSADRLIRLVVEEGLNQLPYKECMVTTPTGYKYEGVKFEKGNC 180
ELQTIIRDKTASRGDFMFSADRLIRLVVEEGLNQLPYKECMVTTPTGYKYEGVKFEKGNC
Sbjct: 121 ELQTIIRDKTASRGDFMFSADRLIRLVVEEGLNQLPYKECMVTTPTGYKYEGVKFEKGNC 180
Query: 181 GVSIMRSGEAMEQGLRDCCRSIRIGKILIQSDEETQRAKVYYAKFPPDIYRRKVLLMYPI 240
GVSIMRSGEAMEQGLRDCCRSIRIGKILIQSDEETQRAKVYYAKFPPDIYRRKVLLMYPI
Sbjct: 181 GVSIMRSGEAMEQGLRDCCRSIRIGKILIQSDEETQRAKVYYAKFPPDIYRRKVLLMYPI 240
Query: 241 LSTGNTVIEAVKVLIEHGVQPSVIILLSLFSTPHGAKSIIQEFPEITILTTEVHPVAPTH 300
LSTGNTVIEAVKVLIEHGVQPSVIILLSLFSTPHGAKSIIQEFPEITILTTEVHPVAPTH
Sbjct: 241 LSTGNTVIEAVKVLIEHGVQPSVIILLSLFSTPHGAKSIIQEFPEITILTTEVHPVAPTH 300
Query: 301 FGQKYFGTD 309
FGQKYFGTD
Sbjct: 301 FGQKYFGTD 309
>gi|57863312 uridine-cytidine kinase 1-like 1 [Homo sapiens]
Length = 548
Score = 154 bits (389), Expect = 1e-37
Identities = 97/252 (38%), Positives = 141/252 (55%), Gaps = 23/252 (9%)
Query: 81 GSGDSSSYDAPAGN--SFLEDCELS-----------RQIGAQLKLLPMNDQIRELQTIIR 127
GSG++ + D + S LE+ ELS + L +L Q+R + TIIR
Sbjct: 282 GSGNTVAIDLIVQHVHSQLEERELSVRAALASAHQCHPLPRTLSVLKSTPQVRGMHTIIR 341
Query: 128 DKTASRGDFMFSADRLIRLVVEEGLNQLPYKECMVTTPTGYKYEGVKFE-KGNCGVSIMR 186
DK SR +F+F + RL+RL++E L+ LP+++C+V TP G Y G + K GVSI+R
Sbjct: 342 DKETSRDEFIFYSKRLMRLLIEHALSFLPFQDCVVQTPQGQDYAGKCYAGKQITGVSILR 401
Query: 187 SGEAMEQGLRDCCRSIRIGKILIQSDEETQRAKVYYAKFPPDIYRRKVLLMYPILSTGNT 246
+GE ME LR C+ +RIG ILIQ+++ T +++Y + P DI V+LM +STG
Sbjct: 402 AGETMEPALRAVCKDVRIGTILIQTNQLTGEPELHYLRLPKDISDDHVILMDCTVSTGAA 461
Query: 247 VIEAVKVLIEHGVQPSVIILLSLFSTPHGAKSIIQEFPEITILTTEVHP-------VAP- 298
+ AV+VL++H V I LLSL G S+ FP + I+TT V + P
Sbjct: 462 AMMAVRVLLDHDVPEDKIFLLSLLMAEMGVHSVAYAFPRVRIITTAVDKRVNDLFRIIPG 521
Query: 299 -THFGQKYFGTD 309
+FG +YFGTD
Sbjct: 522 IGNFGDRYFGTD 533
>gi|22748877 basic helix-loop-helix domain containing, class B, 5
[Homo sapiens]
Length = 381
Score = 33.5 bits (75), Expect = 0.25
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 61 PAELDSGACGGSSLNSEGN-----SGSGDSSSYDAPAGNSFLEDCELSRQIGAQ--LKLL 113
P L G GGSS S G SGSG SSS + + E L I A+ ++
Sbjct: 197 PGGLGGGGGGGSSSGSSGGGGGSGSGSGGSSSSSSSSSKKSKEQKALRLNINARERRRMH 256
Query: 114 PMNDQIRELQTII 126
+ND + EL+ +I
Sbjct: 257 DLNDALDELRAVI 269
>gi|47933339 RNA binding motif protein 15 [Homo sapiens]
Length = 977
Score = 30.4 bits (67), Expect = 2.1
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 42 NRASRAKVILLTGYAHSSLPAELDSGACGGSSLNSEGNSGSGDSSSYDAPAGNS 95
+R R+K + +G ++ S + DSG SL+ + +S G S YD G+S
Sbjct: 66 SRGERSKKLGGSGGSNGSSSGKTDSGGGSRRSLHLDKSSSRGGSREYDTGGGSS 119
>gi|229892308 shugoshin-like 2 isoform 2 [Homo sapiens]
Length = 1260
Score = 30.0 bits (66), Expect = 2.7
Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 8/120 (6%)
Query: 4 ELQCPDSMPCHNQQVNSASTPSPEQLRPGDLILDHAGGNRASRAKVILLTGYAHSSLPAE 63
+L+C D + H +VNS S +Q+ ++ + +AK IL A + L ++
Sbjct: 951 KLECQDIINKHYMEVNSNEKESCDQILDSYKVVKKRKKESSCKAKNILTK--AKNKLASQ 1008
Query: 64 LDSGACGGSSLNSEGNSGSGDSSSYDAPAGNSFLEDCELSRQIGAQL--KLLPMNDQIRE 121
L + SL S+ +S D+ GN +E C+ +Q L K LP ++I+E
Sbjct: 1009 LTESSQTSISLESDLKH---ITSEADSDPGNP-VELCKTQKQSTTTLNKKDLPFVEEIKE 1064
>gi|229892306 shugoshin-like 2 isoform 1 [Homo sapiens]
Length = 1265
Score = 30.0 bits (66), Expect = 2.7
Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 8/120 (6%)
Query: 4 ELQCPDSMPCHNQQVNSASTPSPEQLRPGDLILDHAGGNRASRAKVILLTGYAHSSLPAE 63
+L+C D + H +VNS S +Q+ ++ + +AK IL A + L ++
Sbjct: 951 KLECQDIINKHYMEVNSNEKESCDQILDSYKVVKKRKKESSCKAKNILTK--AKNKLASQ 1008
Query: 64 LDSGACGGSSLNSEGNSGSGDSSSYDAPAGNSFLEDCELSRQIGAQL--KLLPMNDQIRE 121
L + SL S+ +S D+ GN +E C+ +Q L K LP ++I+E
Sbjct: 1009 LTESSQTSISLESDLKH---ITSEADSDPGNP-VELCKTQKQSTTTLNKKDLPFVEEIKE 1064
>gi|229892197 shugoshin-like 2 isoform 3 [Homo sapiens]
Length = 1261
Score = 30.0 bits (66), Expect = 2.7
Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 8/120 (6%)
Query: 4 ELQCPDSMPCHNQQVNSASTPSPEQLRPGDLILDHAGGNRASRAKVILLTGYAHSSLPAE 63
+L+C D + H +VNS S +Q+ ++ + +AK IL A + L ++
Sbjct: 951 KLECQDIINKHYMEVNSNEKESCDQILDSYKVVKKRKKESSCKAKNILTK--AKNKLASQ 1008
Query: 64 LDSGACGGSSLNSEGNSGSGDSSSYDAPAGNSFLEDCELSRQIGAQL--KLLPMNDQIRE 121
L + SL S+ +S D+ GN +E C+ +Q L K LP ++I+E
Sbjct: 1009 LTESSQTSISLESDLKH---ITSEADSDPGNP-VELCKTQKQSTTTLNKKDLPFVEEIKE 1064
>gi|187761373 ariadne ubiquitin-conjugating enzyme E2 binding
protein homolog 1 [Homo sapiens]
Length = 557
Score = 30.0 bits (66), Expect = 2.7
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 7/106 (6%)
Query: 65 DSGACGGSSLNSEGNSGSGDSSSYDAPAGNSFLEDCELSRQIGAQLKLLPMNDQIRELQT 124
++G GGS+L G G G P G+ ED Q+ L M + IRE+
Sbjct: 65 ETGGGGGSALGPGGGGGGGGGGGGGGP-GHEQEEDYRYEVLTAEQI-LQHMVECIREVNE 122
Query: 125 IIRD-KTASR---GDFMFSADRLIRLVVEEGLNQLPYKECMVTTPT 166
+I++ T +R F + ++L+ + L +L + EC V P+
Sbjct: 123 VIQNPATITRILLSHFNWDKEKLMERYFDGNLEKL-FAECHVINPS 167
>gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo
sapiens]
Length = 1843
Score = 29.3 bits (64), Expect = 4.6
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 12/64 (18%)
Query: 16 QQVNSASTPSPEQLRPGDLILDHAGGNRASRAKVILLTGYAHSSLPAELDSGACGGSSLN 75
Q VN+ T S E + P + D + G+R H+S PA LDSG S+ N
Sbjct: 1524 QLVNNKDTTSFEDISPQGVSDDSSTGSRV------------HASRPASLDSGRTSTSNSN 1571
Query: 76 SEGN 79
+ +
Sbjct: 1572 NNAS 1575
>gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo
sapiens]
Length = 1870
Score = 29.3 bits (64), Expect = 4.6
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 12/64 (18%)
Query: 16 QQVNSASTPSPEQLRPGDLILDHAGGNRASRAKVILLTGYAHSSLPAELDSGACGGSSLN 75
Q VN+ T S E + P + D + G+R H+S PA LDSG S+ N
Sbjct: 1551 QLVNNKDTTSFEDISPQGVSDDSSTGSRV------------HASRPASLDSGRTSTSNSN 1598
Query: 76 SEGN 79
+ +
Sbjct: 1599 NNAS 1602
>gi|134031945 SCO-spondin [Homo sapiens]
Length = 5147
Score = 29.3 bits (64), Expect = 4.6
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 155 LPYKECMVTTPTGYKYEGVKFEKGNCGVSIMRSGEAMEQ 193
LP EC K+ GV F GNC + GE + Q
Sbjct: 2670 LPLSECPCLVGEELKWPGVSFLLGNCSQCVCEKGELLCQ 2708
>gi|148839376 PWWP domain containing 2 isoform 1 [Homo sapiens]
Length = 590
Score = 29.3 bits (64), Expect = 4.6
Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 5/58 (8%)
Query: 52 LTGYAHSSLPAELDSGACGGSSLNSEGNSGSGD--SSSYDAPAGN---SFLEDCELSR 104
L GY S PA G GG + S G+SG D S P G +FL C R
Sbjct: 357 LNGYLRDSSPAPCADGPAGGLADLSSGSSGEDDDFKSCPQGPQGREGLAFLVSCPEGR 414
>gi|148839311 PWWP domain containing 2 isoform 2 [Homo sapiens]
Length = 499
Score = 29.3 bits (64), Expect = 4.6
Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 5/58 (8%)
Query: 52 LTGYAHSSLPAELDSGACGGSSLNSEGNSGSGD--SSSYDAPAGN---SFLEDCELSR 104
L GY S PA G GG + S G+SG D S P G +FL C R
Sbjct: 357 LNGYLRDSSPAPCADGPAGGLADLSSGSSGEDDDFKSCPQGPQGREGLAFLVSCPEGR 414
>gi|57864582 hornerin [Homo sapiens]
Length = 2850
Score = 28.9 bits (63), Expect = 6.0
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 38 HAGGNRASRAKVILLTGYAHSSLPAELDSGACGGSSLNSEGNSGSGDSSS---YDAPAGN 94
H G+R S +G HS SG+ G SS + + SGSG SSS Y++ +G+
Sbjct: 2162 HGSGSRQSSGHGRQGSGSGHSPSRGRHGSGS-GHSSSHGQHGSGSGRSSSRGPYESRSGH 2220
Query: 95 S 95
S
Sbjct: 2221 S 2221
>gi|94536811 NEDD4-like ubiquitin-protein ligase 1 [Homo sapiens]
Length = 1606
Score = 28.9 bits (63), Expect = 6.0
Identities = 21/62 (33%), Positives = 25/62 (40%)
Query: 26 PEQLRPGDLILDHAGGNRASRAKVILLTGYAHSSLPAELDSGACGGSSLNSEGNSGSGDS 85
PE PG H+GG+ S A G H S +E DS G + EG S S
Sbjct: 620 PEGATPGTAHPGHSGGHFPSLANGAAQDGDTHPSTGSESDSSPRQGGDHSCEGCDASCCS 679
Query: 86 SS 87
S
Sbjct: 680 PS 681
>gi|13786123 HMG-box transcription factor TCF-3 [Homo sapiens]
Length = 588
Score = 28.5 bits (62), Expect = 7.9
Identities = 24/85 (28%), Positives = 33/85 (38%), Gaps = 13/85 (15%)
Query: 70 GGSSLNSEGNSGSGDSSSYDAPAGNSFLEDCELSRQIGAQLKLLPMNDQIRELQTIIRDK 129
GG G SG G SS A G +GA +L+P D+ E Q D
Sbjct: 5 GGGGGGGGGGSGGGGGSSAGAAGGGD---------DLGANDELIPFQDEGGEEQEPSSDS 55
Query: 130 TASRGDFMFSADRLIRLVVEEGLNQ 154
+++ D D + +V E NQ
Sbjct: 56 ASAQRDL----DEVKSSLVNESENQ 76
>gi|186928829 dermokine isoform 4 precursor [Homo sapiens]
Length = 386
Score = 28.5 bits (62), Expect = 7.9
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 5/34 (14%)
Query: 67 GACGGSSLNSEGNSG-----SGDSSSYDAPAGNS 95
G+ GGSS S GNSG SG SS+ + G+S
Sbjct: 280 GSSGGSSGGSSGNSGGSRGDSGSESSWGSSTGSS 313
>gi|186928827 dermokine isoform 5 precursor [Homo sapiens]
Length = 398
Score = 28.5 bits (62), Expect = 7.9
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 5/34 (14%)
Query: 67 GACGGSSLNSEGNSG-----SGDSSSYDAPAGNS 95
G+ GGSS S GNSG SG SS+ + G+S
Sbjct: 280 GSSGGSSGGSSGNSGGSRGDSGSESSWGSSTGSS 313
>gi|186928825 dermokine isoform 3 precursor [Homo sapiens]
Length = 416
Score = 28.5 bits (62), Expect = 7.9
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 5/34 (14%)
Query: 67 GACGGSSLNSEGNSG-----SGDSSSYDAPAGNS 95
G+ GGSS S GNSG SG SS+ + G+S
Sbjct: 280 GSSGGSSGGSSGNSGGSRGDSGSESSWGSSTGSS 313
>gi|33504489 dermokine isoform 2 precursor [Homo sapiens]
Length = 476
Score = 28.5 bits (62), Expect = 7.9
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 5/34 (14%)
Query: 67 GACGGSSLNSEGNSG-----SGDSSSYDAPAGNS 95
G+ GGSS S GNSG SG SS+ + G+S
Sbjct: 280 GSSGGSSGGSSGNSGGSRGDSGSESSWGSSTGSS 313
>gi|42822876 hypothetical protein LOC286343 [Homo sapiens]
Length = 228
Score = 28.5 bits (62), Expect = 7.9
Identities = 13/29 (44%), Positives = 14/29 (48%)
Query: 60 LPAELDSGACGGSSLNSEGNSGSGDSSSY 88
+P E D CGGS G G SSSY
Sbjct: 34 VPRERDRDPCGGSGGGGGGGGGCSSSSSY 62
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,955,535
Number of Sequences: 37866
Number of extensions: 519616
Number of successful extensions: 1786
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1757
Number of HSP's gapped (non-prelim): 77
length of query: 309
length of database: 18,247,518
effective HSP length: 102
effective length of query: 207
effective length of database: 14,385,186
effective search space: 2977733502
effective search space used: 2977733502
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.