Guide to the Human Genome
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Name: UPRT Sequence: fasta or formatted (309aa) NCBI GI: 21450816
Description:

uracil phosphoribosyltransferase (FUR1) homolog

Referenced in:

Pyrimidine Biosynthesis and Catabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         19           1
 C cysteine            2.6          8           2
 D aspartate           4.9         15           1
 E glutamate           6.8         21           2
 F phenylalanine       2.9          9           1
 G glycine             8.4         26           2
 H histidine           2.3          7           1
 I isoleucine          7.1         22           2
 K lysine              4.5         14           1
 L leucine             9.4         29           2
 M methionine          2.6          8           1
 N asparagine          3.2         10           1
 P proline             5.8         18           2
 Q glutamine           4.9         15           2
 R arginine            5.2         16           2
 S serine              9.4         29           3
 T threonine           5.5         17           2
 V valine              5.2         16           2
 W tryptophan          0.0          0           0
 Y tyrosine            3.2         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   uracil phosphoribosyltransferase (FUR1) homolog [Hom... 
UCKL1                 0.217   uridine-cytidine kinase 1-like 1 
BHLHE22               0.013   basic helix-loop-helix domain containing, class B, 5...
RBM15                 0.008   RNA binding motif protein 15 
SGOL2                 0.008   shugoshin-like 2 isoform 2 
SGOL2                 0.008   shugoshin-like 2 isoform 1 
SGOL2                 0.008   shugoshin-like 2 isoform 3 
ARIH1                 0.008   ariadne ubiquitin-conjugating enzyme E2 binding pro...
CCDC88A               0.007   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.007   coiled-coil domain containing 88A isoform 1 
SSPO                  0.007   SCO-spondin 
PWWP2B                0.007   PWWP domain containing 2 isoform 1 
PWWP2B                0.007   PWWP domain containing 2 isoform 2 
HRNR                  0.007   hornerin 
HECW1                 0.007   NEDD4-like ubiquitin-protein ligase 1 
TCF7L1                0.005   HMG-box transcription factor TCF-3 
DMKN                  0.005   dermokine isoform 4 precursor 
DMKN                  0.005   dermokine isoform 5 precursor 
DMKN                  0.005   dermokine isoform 3 precursor 
DMKN                  0.005   dermokine isoform 2 precursor 
C9orf150              0.005   hypothetical protein LOC286343 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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