Guide to the Human Genome
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Name: ZNF613 Sequence: fasta or formatted (581aa) NCBI GI: 21362003
Description:

zinc finger protein 613 isoform 2

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [617aa] zinc finger protein 613 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8         22           2
 C cysteine            5.9         34           1
 D aspartate           3.1         18           1
 E glutamate           6.2         36           1
 F phenylalanine       3.8         22           1
 G glycine             7.4         43           2
 H histidine           7.4         43           1
 I isoleucine          4.8         28           2
 K lysine             10.0         58           2
 L leucine             5.9         34           2
 M methionine          1.0          6           1
 N asparagine          5.3         31           1
 P proline             3.1         18           1
 Q glutamine           5.7         33           1
 R arginine            5.5         32           2
 S serine              8.6         50           2
 T threonine           5.5         32           1
 V valine              4.3         25           1
 W tryptophan          0.5          3           1
 Y tyrosine            2.2         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 613 isoform 2 
ZNF613                0.998   zinc finger protein 613 isoform 1 
ZNF615                0.524   zinc finger protein 615 
ZNF614                0.514   zinc finger protein 614 
ZNF432                0.508   zinc finger protein 432 
LOC100287429          0.414   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.414   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.414   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.414   zinc finger protein 84 
ZNF84                 0.414   zinc finger protein 84 
ZNF649                0.401   zinc finger protein 649 
ZNF300                0.400   zinc finger protein 300 
ZNF268                0.400   zinc finger protein 268 
ZNF568                0.395   zinc finger protein 568 
ZNF350                0.394   zinc finger protein 350 
ZNF630                0.394   zinc finger protein 630 
ZNF569                0.394   zinc finger protein 569 
ZNF182                0.380   zinc finger protein 21 isoform 2 
ZNF182                0.380   zinc finger protein 21 isoform 1 
ZNF26                 0.371   zinc finger protein 26 
ZNF567                0.370   zinc finger protein 567 
PRDM9                 0.368   PR domain containing 9 
ZNF585B               0.368   zinc finger protein 585B 
ZNF41                 0.367   zinc finger protein 41 
ZNF41                 0.367   zinc finger protein 41 
ZNF135                0.366   zinc finger protein 135 
ZNF585A               0.366   zinc finger protein 585A 
ZNF585A               0.366   zinc finger protein 585A 
LOC100287515          0.365   PREDICTED: hypothetical protein XP_002343928 
ZNF484                0.365   zinc finger protein 484 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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