Search of human proteins with 11386135

Search of human proteins with 11386135

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|11386135 branched chain keto acid dehydrogenase E1, alpha
polypeptide [Homo sapiens]
         (445 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|11386135 branched chain keto acid dehydrogenase E1, alpha pol...   909   0.0  
gi|4505685 pyruvate dehydrogenase E1 alpha 1 precursor [Homo sap...   120   3e-27
gi|4885543 pyruvate dehydrogenase E1 alpha 2 [Homo sapiens]           115   6e-26
gi|133778974 transketolase-like 2 [Homo sapiens]                       39   0.012
gi|205277463 transketolase isoform 1 [Homo sapiens]                    37   0.047
gi|4507521 transketolase isoform 1 [Homo sapiens]                      37   0.047
gi|205277465 transketolase isoform 2 [Homo sapiens]                    33   0.52 
gi|222352149 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Homo sap...    32   0.89 
gi|7657138 golgi integral membrane protein 4 [Homo sapiens]            32   0.89 
gi|11693132 UPF2 regulator of nonsense transcripts homolog [Homo...    31   2.6  
gi|18375676 UPF2 regulator of nonsense transcripts homolog [Homo...    31   2.6  
gi|224831257 importin 13 [Homo sapiens]                                30   3.4  
gi|115648142 centrosomal protein 164kDa [Homo sapiens]                 30   3.4  
gi|25777600 proteasome 26S non-ATPase subunit 1 [Homo sapiens]         30   3.4  
gi|41327691 kinesin-like motor protein C20orf23 [Homo sapiens]         30   4.4  
gi|91208418 transcription elongation regulator 1 isoform 2 [Homo...    30   4.4  
gi|21327715 transcription elongation regulator 1 isoform 1 [Homo...    30   4.4  
gi|90819237 myeloid/lymphoid or mixed-lineage leukemia (trithora...    30   5.8  
gi|90819233 myeloid/lymphoid or mixed-lineage leukemia (trithora...    30   5.8  
gi|90819231 myeloid/lymphoid or mixed-lineage leukemia (trithora...    30   5.8  
gi|55741709 RNA binding motif protein 25 [Homo sapiens]                29   7.5  
gi|55749865 DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 [Homo sapi...    29   9.9  
gi|119395746 Kallmann syndrome 1 protein precursor [Homo sapiens]      29   9.9  

>gi|11386135 branched chain keto acid dehydrogenase E1, alpha
           polypeptide [Homo sapiens]
          Length = 445

 Score =  909 bits (2348), Expect = 0.0
 Identities = 445/445 (100%), Positives = 445/445 (100%)

Query: 1   MAVAIAAARVWRLNRGLSQAALLLLRQPGARGLARSHPPRQQQQFSSLDDKPQFPGASAE 60
           MAVAIAAARVWRLNRGLSQAALLLLRQPGARGLARSHPPRQQQQFSSLDDKPQFPGASAE
Sbjct: 1   MAVAIAAARVWRLNRGLSQAALLLLRQPGARGLARSHPPRQQQQFSSLDDKPQFPGASAE 60

Query: 61  FIDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPKEKVLKLYKSMTLLNTMDRILY 120
           FIDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPKEKVLKLYKSMTLLNTMDRILY
Sbjct: 61  FIDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPKEKVLKLYKSMTLLNTMDRILY 120

Query: 121 ESQRQGRISFYMTNYGEEGTHVGSAAALDNTDLVFGQYREAGVLMYRDYPLELFMAQCYG 180
           ESQRQGRISFYMTNYGEEGTHVGSAAALDNTDLVFGQYREAGVLMYRDYPLELFMAQCYG
Sbjct: 121 ESQRQGRISFYMTNYGEEGTHVGSAAALDNTDLVFGQYREAGVLMYRDYPLELFMAQCYG 180

Query: 181 NISDLGKGRQMPVHYGCKERHFVTISSPLATQIPQAVGAAYAAKRANANRVVICYFGEGA 240
           NISDLGKGRQMPVHYGCKERHFVTISSPLATQIPQAVGAAYAAKRANANRVVICYFGEGA
Sbjct: 181 NISDLGKGRQMPVHYGCKERHFVTISSPLATQIPQAVGAAYAAKRANANRVVICYFGEGA 240

Query: 241 ASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPGYGIMSIRVDG 300
           ASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPGYGIMSIRVDG
Sbjct: 241 ASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPGYGIMSIRVDG 300

Query: 301 NDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSAYRSVDEVNYWDKQDHP 360
           NDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSAYRSVDEVNYWDKQDHP
Sbjct: 301 NDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSAYRSVDEVNYWDKQDHP 360

Query: 361 ISRLRHYLLSQGWWDEEQEKAWRKQSRRKVMEAFEQAERKPKPNPNLLFSDVYQEMPAQL 420
           ISRLRHYLLSQGWWDEEQEKAWRKQSRRKVMEAFEQAERKPKPNPNLLFSDVYQEMPAQL
Sbjct: 361 ISRLRHYLLSQGWWDEEQEKAWRKQSRRKVMEAFEQAERKPKPNPNLLFSDVYQEMPAQL 420

Query: 421 RKQQESLARHLQTYGEHYPLDHFDK 445
           RKQQESLARHLQTYGEHYPLDHFDK
Sbjct: 421 RKQQESLARHLQTYGEHYPLDHFDK 445


>gi|4505685 pyruvate dehydrogenase E1 alpha 1 precursor [Homo
           sapiens]
          Length = 390

 Score =  120 bits (300), Expect = 3e-27
 Identities = 89/322 (27%), Positives = 140/322 (43%), Gaps = 5/322 (1%)

Query: 97  LPKEKVLKLYKSMTLLNTMDRILYESQRQGRI-SFYMTNYGEEGTHVGSAAALDNTDLVF 155
           L +E  LK Y+ M  +  M+    +  +Q  I  F     G+E   VG  A ++ TD + 
Sbjct: 56  LTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLI 115

Query: 156 GQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLATQIPQ 215
             YR  G    R   +   +A+  G      KG+   +H   K  +F   +  +  Q+P 
Sbjct: 116 TAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVPL 173

Query: 216 AVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPT 275
             G A A K    + V +  +G+GAA++G     +N AA  + P IF C NN Y + T  
Sbjct: 174 GAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSV 233

Query: 276 SEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGH 335
                      RG    I  +RVDG D+  V  AT+ A     +   P L+E  TYR   
Sbjct: 234 ERAAASTDYYKRGDF--IPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHG 291

Query: 336 HSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRRKVMEAFE 395
           HS SD   +YR+ +E+     +  PI  L+  +++      E+ K    + R+++ +A +
Sbjct: 292 HSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQ 351

Query: 396 QAERKPKPNPNLLFSDVYQEMP 417
            A   P+P    L   +Y   P
Sbjct: 352 FATADPEPPLEELGYHIYSSDP 373


>gi|4885543 pyruvate dehydrogenase E1 alpha 2 [Homo sapiens]
          Length = 388

 Score =  115 bits (289), Expect = 6e-26
 Identities = 89/318 (27%), Positives = 141/318 (44%), Gaps = 5/318 (1%)

Query: 97  LPKEKVLKLYKSMTLLNTMDRILYESQRQGRI-SFYMTNYGEEGTHVGSAAALDNTDLVF 155
           L + + LK Y+ M  +  M+    +  +Q  I  F     G+E   VG  A ++ +D V 
Sbjct: 54  LTRAEGLKYYRMMLTVRRMELKADQLYKQKFIRGFCHLCDGQEACCVGLEAGINPSDHVI 113

Query: 156 GQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLATQIPQ 215
             YR  GV   R   +   +A+  G      KG+   +H   K  +F   +  +  Q P 
Sbjct: 114 TSYRAHGVCYTRGLSVRSILAELTGRRGGCAKGKGGSMHMYTK--NFYGGNGIVGAQGPL 171

Query: 216 AVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPT 275
             G A A K    + + +  +G+GAA++G     FN AA  + P +F C NN Y + T T
Sbjct: 172 GAGIALACKYKGNDEICLTLYGDGAANQGQIAEAFNMAALWKLPCVFICENNLYGMGTST 231

Query: 276 SEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGH 335
                      RG    I  ++VDG DV  V  ATK A     +   P L+E  TYR   
Sbjct: 232 ERAAASPDYYKRGNF--IPGLKVDGMDVLCVREATKFAANYCRSGKGPILMELQTYRYHG 289

Query: 336 HSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRRKVMEAFE 395
           HS SD   +YR+ +E+     +  PI  L+  +++      E+ K    + R+++ +A +
Sbjct: 290 HSMSDPGVSYRTREEIQEVRSKRDPIIILQDRMVNSKLATVEELKEIGAEVRKEIDDAAQ 349

Query: 396 QAERKPKPNPNLLFSDVY 413
            A   P+P+   L   +Y
Sbjct: 350 FATTDPEPHLEELGHHIY 367


>gi|133778974 transketolase-like 2 [Homo sapiens]
          Length = 626

 Score = 38.5 bits (88), Expect = 0.012
 Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 12/143 (8%)

Query: 199 ERH------FVTISS-PLATQIPQAVGAAYAAKRAN-ANRVVICYFGEGAASEGDAHAGF 250
           ERH      FV +++  L   +  A G AY  K  + A+  V C  G+G +SEG     F
Sbjct: 109 ERHPTPRLPFVDVATGSLGQGLGTACGMAYTGKYLDKASYRVFCLMGDGESSEGSVWEAF 168

Query: 251 NFAATLECP-IIFFCRNNGYAISTPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNA 309
            FA+      ++     N    S P   ++  D        +G  +  VDG+DV A+  A
Sbjct: 169 AFASHYNLDNLVAVFDVNRLGQSGPAPLEHGADIYQNCCEAFGWNTYLVDGHDVEALCQA 228

Query: 310 TKEARRRAVAENQPFLIEAMTYR 332
             +A +    +N+P  I A T++
Sbjct: 229 FWQASQ---VKNKPTAIVAKTFK 248


>gi|205277463 transketolase isoform 1 [Homo sapiens]
          Length = 623

 Score = 36.6 bits (83), Expect = 0.047
 Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 8/119 (6%)

Query: 216 AVGAAYAAKRAN-ANRVVICYFGEGAASEGDAHAGFNFAATLECP-IIFFCRNNGYAIST 273
           A G AY  K  + A+  V C  G+G  SEG       FA+  +   ++     N    S 
Sbjct: 132 ACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLVAILDINRLGQSD 191

Query: 274 PTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYR 332
           P   Q++ D    R   +G  +I VDG+ V  +  A  +A+      +QP  I A T++
Sbjct: 192 PAPLQHQMDIYQKRCEAFGWHAIIVDGHSVEELCKAFGQAK------HQPTAIIAKTFK 244


>gi|4507521 transketolase isoform 1 [Homo sapiens]
          Length = 623

 Score = 36.6 bits (83), Expect = 0.047
 Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 8/119 (6%)

Query: 216 AVGAAYAAKRAN-ANRVVICYFGEGAASEGDAHAGFNFAATLECP-IIFFCRNNGYAIST 273
           A G AY  K  + A+  V C  G+G  SEG       FA+  +   ++     N    S 
Sbjct: 132 ACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLVAILDINRLGQSD 191

Query: 274 PTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYR 332
           P   Q++ D    R   +G  +I VDG+ V  +  A  +A+      +QP  I A T++
Sbjct: 192 PAPLQHQMDIYQKRCEAFGWHAIIVDGHSVEELCKAFGQAK------HQPTAIIAKTFK 244


>gi|205277465 transketolase isoform 2 [Homo sapiens]
          Length = 540

 Score = 33.1 bits (74), Expect = 0.52
 Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 7/102 (6%)

Query: 232 VICYFGEGAASEGDAHAGFNFAATLECP-IIFFCRNNGYAISTPTSEQYRGDGIAARGPG 290
           V C  G+G  SEG       FA+  +   ++     N    S P   Q++ D    R   
Sbjct: 66  VYCLLGDGELSEGSVWEAMAFASIYKLDNLVAILDINRLGQSDPAPLQHQMDIYQKRCEA 125

Query: 291 YGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYR 332
           +G  +I VDG+ V  +  A  +A+      +QP  I A T++
Sbjct: 126 FGWHAIIVDGHSVEELCKAFGQAK------HQPTAIIAKTFK 161


>gi|222352149 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Homo
           sapiens]
          Length = 648

 Score = 32.3 bits (72), Expect = 0.89
 Identities = 12/37 (32%), Positives = 20/37 (54%)

Query: 381 AWRKQSRRKVMEAFEQAERKPKPNPNLLFSDVYQEMP 417
           +WRK++     +  +  E++P PNP   F D +Q  P
Sbjct: 215 SWRKENFNITWDDLKDGEKRPIPNPTCTFDDAFQCYP 251


>gi|7657138 golgi integral membrane protein 4 [Homo sapiens]
          Length = 696

 Score = 32.3 bits (72), Expect = 0.89
 Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 6/67 (8%)

Query: 376 EEQEKAWRKQSRRK----VMEAFEQAERKPKPNPNLLFSDVYQEMPAQ--LRKQQESLAR 429
           EEQ++ W++Q  ++    ++E   +AE  P   P + F   Y+E   Q  L  QQ   A+
Sbjct: 366 EEQDREWKEQHEQREAANLLEGHARAEVYPSAKPMIKFQSPYEEQLEQQRLAVQQVEEAQ 425

Query: 430 HLQTYGE 436
            L+ + E
Sbjct: 426 QLREHQE 432


>gi|11693132 UPF2 regulator of nonsense transcripts homolog [Homo
           sapiens]
          Length = 1272

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 13/63 (20%)

Query: 376 EEQEKAWRKQSRRKVMEAFEQAERKPKPNPNLLFSDVYQEMPAQLRKQQESLARHLQTYG 435
           EE+EK   ++  RK  E  EQA+R+ +           +E  AQ+++++ES+  H + + 
Sbjct: 90  EEEEKKKHQEEERKKQE--EQAKRQQE-----------EEAAAQMKEKEESIQLHQEAWE 136

Query: 436 EHY 438
            H+
Sbjct: 137 RHH 139


>gi|18375676 UPF2 regulator of nonsense transcripts homolog [Homo
           sapiens]
          Length = 1272

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 13/63 (20%)

Query: 376 EEQEKAWRKQSRRKVMEAFEQAERKPKPNPNLLFSDVYQEMPAQLRKQQESLARHLQTYG 435
           EE+EK   ++  RK  E  EQA+R+ +           +E  AQ+++++ES+  H + + 
Sbjct: 90  EEEEKKKHQEEERKKQE--EQAKRQQE-----------EEAAAQMKEKEESIQLHQEAWE 136

Query: 436 EHY 438
            H+
Sbjct: 137 RHH 139


>gi|224831257 importin 13 [Homo sapiens]
          Length = 963

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 1/79 (1%)

Query: 38  PPRQQQQFSSLDDKPQFPGASAEFIDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHL 97
           P  ++  F S D+K QF     +  D L ++   ++    +  + D+ G+++  SE+P+ 
Sbjct: 404 PSDEEYGFWSSDEKEQFRIYRVDISDTLMYVY-EMLGAELLSNLYDKLGRLLTSSEEPYS 462

Query: 98  PKEKVLKLYKSMTLLNTMD 116
            +     LY   ++  T+D
Sbjct: 463 WQHTEALLYGFQSIAETID 481


>gi|115648142 centrosomal protein 164kDa [Homo sapiens]
          Length = 1460

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 24/118 (20%), Positives = 55/118 (46%), Gaps = 6/118 (5%)

Query: 308 NATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHY 367
           ++ +E  ++A+ E +  + E  + R+        SS     D++    +Q+  + +LR  
Sbjct: 645 SSLRERLQKAIEEEEARMREEESQRLSWLRAQVQSSTQADEDQIRA--EQEASLQKLREE 702

Query: 368 LLSQGWWDEEQEKAWRKQSRRKVMEAFEQAERKPKPNPNLLFSDVYQEMPAQLRKQQE 425
           L SQ    ++ E+A  +Q  R+++E  ++     + +     +   ++   QLR+Q E
Sbjct: 703 LESQ----QKAERASLEQKNRQMLEQLKEEIEASEKSEQAALNAAKEKALQQLREQLE 756


>gi|25777600 proteasome 26S non-ATPase subunit 1 [Homo sapiens]
          Length = 953

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 3/49 (6%)

Query: 376 EEQEKAWRKQSRRKVMEAF--EQAERKPKPNPNL-LFSDVYQEMPAQLR 421
           +E+EK  +++ + +V EA   E+ E+K +P PN  L  +  + MPAQL+
Sbjct: 842 KEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEPNFQLLDNPARVMPAQLK 890


>gi|41327691 kinesin-like motor protein C20orf23 [Homo sapiens]
          Length = 1317

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 16/60 (26%), Positives = 34/60 (56%), Gaps = 6/60 (10%)

Query: 376 EEQEKAWRKQSRRKVMEAFEQAERKPKPNPNLLFSDVYQE------MPAQLRKQQESLAR 429
           +++E+  + +S+RK++E  E+ ++  K     +  +V  +      +  Q+RKQ+ESL R
Sbjct: 601 QQREELEKLESKRKLIEEMEEKQKSDKAELERMQQEVETQRKETEIVQLQIRKQEESLKR 660


>gi|91208418 transcription elongation regulator 1 isoform 2 [Homo
           sapiens]
          Length = 1077

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 17/126 (13%)

Query: 297 RVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSAYRSVDEVNYWDK 356
           R D  D+ +   A  EA  +A  E     +EA   +        D    R V   + W+K
Sbjct: 609 RDDNKDIDSEKEAAMEAEIKAARERAIVPLEARMKQF------KDMLLERGVSAFSTWEK 662

Query: 357 QDHPISRLRHYLLSQ--------GWWDEEQEKAWRKQSRRKVMEA---FEQAERKPKPNP 405
           + H I     YLL            + + + +  R++ + K+M+A   F++   + K NP
Sbjct: 663 ELHKIVFDPRYLLLNPKERKQVFDQYVKTRAEEERREKKNKIMQAKEDFKKMMEEAKFNP 722

Query: 406 NLLFSD 411
              FS+
Sbjct: 723 RATFSE 728


>gi|21327715 transcription elongation regulator 1 isoform 1 [Homo
           sapiens]
          Length = 1098

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 17/126 (13%)

Query: 297 RVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSAYRSVDEVNYWDK 356
           R D  D+ +   A  EA  +A  E     +EA   +        D    R V   + W+K
Sbjct: 630 RDDNKDIDSEKEAAMEAEIKAARERAIVPLEARMKQF------KDMLLERGVSAFSTWEK 683

Query: 357 QDHPISRLRHYLLSQ--------GWWDEEQEKAWRKQSRRKVMEA---FEQAERKPKPNP 405
           + H I     YLL            + + + +  R++ + K+M+A   F++   + K NP
Sbjct: 684 ELHKIVFDPRYLLLNPKERKQVFDQYVKTRAEEERREKKNKIMQAKEDFKKMMEEAKFNP 743

Query: 406 NLLFSD 411
              FS+
Sbjct: 744 RATFSE 749


>gi|90819237 myeloid/lymphoid or mixed-lineage leukemia (trithorax
            homolog, Drosophila); translocated to, 4 isoform 1 [Homo
            sapiens]
          Length = 1834

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 2/68 (2%)

Query: 365  RHYLLSQGWWDEEQEKAWRKQSRRKVMEAFEQAERKPKPNPNLLFSDVYQEMPAQLRKQQ 424
            R Y   +   +EE+E+  R+Q R+  +         P P   L    +  E P+ L++ Q
Sbjct: 1416 RWYEKEKARLEEERERKRREQERK--LGQMRTQSLNPAPFSPLTAQQMKPEKPSTLQRPQ 1473

Query: 425  ESLARHLQ 432
            E++ R LQ
Sbjct: 1474 ETVIRELQ 1481


>gi|90819233 myeloid/lymphoid or mixed-lineage leukemia (trithorax
            homolog, Drosophila); translocated to, 4 isoform 2 [Homo
            sapiens]
          Length = 1651

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 2/68 (2%)

Query: 365  RHYLLSQGWWDEEQEKAWRKQSRRKVMEAFEQAERKPKPNPNLLFSDVYQEMPAQLRKQQ 424
            R Y   +   +EE+E+  R+Q R+  +         P P   L    +  E P+ L++ Q
Sbjct: 1417 RWYEKEKARLEEERERKRREQERK--LGQMRTQSLNPAPFSPLTAQQMKPEKPSTLQRPQ 1474

Query: 425  ESLARHLQ 432
            E++ R LQ
Sbjct: 1475 ETVIRELQ 1482


>gi|90819231 myeloid/lymphoid or mixed-lineage leukemia (trithorax
            homolog, Drosophila); translocated to, 4 isoform 3 [Homo
            sapiens]
          Length = 1612

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 2/68 (2%)

Query: 365  RHYLLSQGWWDEEQEKAWRKQSRRKVMEAFEQAERKPKPNPNLLFSDVYQEMPAQLRKQQ 424
            R Y   +   +EE+E+  R+Q R+  +         P P   L    +  E P+ L++ Q
Sbjct: 1401 RWYEKEKARLEEERERKRREQERK--LGQMRTQSLNPAPFSPLTAQQMKPEKPSTLQRPQ 1458

Query: 425  ESLARHLQ 432
            E++ R LQ
Sbjct: 1459 ETVIRELQ 1466


>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
          Length = 843

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 13/33 (39%), Positives = 21/33 (63%)

Query: 375 DEEQEKAWRKQSRRKVMEAFEQAERKPKPNPNL 407
           +EE+EK  +++ R + ME  E+ E+KP   P L
Sbjct: 585 EEEEEKQEKEEKREEPMEEEEEPEQKPCLKPTL 617


>gi|55749865 DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 [Homo
           sapiens]
          Length = 631

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 13/46 (28%), Positives = 22/46 (47%)

Query: 376 EEQEKAWRKQSRRKVMEAFEQAERKPKPNPNLLFSDVYQEMPAQLR 421
           E Q   WRK++     +  +  E++  P P   F D +Q+ P  L+
Sbjct: 190 EMQVINWRKENFNITCDDLKSGEKRLIPKPTCRFKDAFQQYPDLLK 235


>gi|119395746 Kallmann syndrome 1 protein precursor [Homo sapiens]
          Length = 680

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 4/75 (5%)

Query: 332 RIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRRKVM 391
           R+ + + + D S   ++     WD  + P   + HY +   W    +     K+ RRK  
Sbjct: 297 RLANSTVNSDGSVTVTI----VWDLPEEPDIPVHHYKVFWSWMVSSKSLVPTKKKRRKTT 352

Query: 392 EAFEQAERKPKPNPN 406
           + F+ +    K  P+
Sbjct: 353 DGFQNSVILEKLQPD 367


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.135    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,241,543
Number of Sequences: 37866
Number of extensions: 783926
Number of successful extensions: 2250
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 2229
Number of HSP's gapped (non-prelim): 34
length of query: 445
length of database: 18,247,518
effective HSP length: 105
effective length of query: 340
effective length of database: 14,271,588
effective search space: 4852339920
effective search space used: 4852339920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.