Guide to the Human Genome
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Search of human proteins with 21361397

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|21361397 Rac GTPase activating protein 1 [Homo sapiens]
         (632 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|186910302 Rac GTPase activating protein 1 [Homo sapiens]          1253   0.0  
gi|186910300 Rac GTPase activating protein 1 [Homo sapiens]          1253   0.0  
gi|21361397 Rac GTPase activating protein 1 [Homo sapiens]           1253   0.0  
gi|4502813 chimerin (chimaerin) 1 isoform a [Homo sapiens]            125   1e-28
gi|209364623 chimerin (chimaerin) 1 isoform b [Homo sapiens]          122   1e-27
gi|194272142 myosin IXB isoform 2 [Homo sapiens]                      118   2e-26
gi|33356170 myosin IXB isoform 1 [Homo sapiens]                       118   2e-26
gi|4757980 beta chimerin isoform 2 [Homo sapiens]                     114   3e-25
gi|91106928 beta chimerin isoform 1 [Homo sapiens]                    114   3e-25
gi|229094128 active breakpoint cluster region-related  protein i...   106   7e-23
gi|38679957 active breakpoint cluster region-related  protein is...   106   7e-23
gi|38679954 active breakpoint cluster region-related  protein is...   106   7e-23
gi|208022687 GTPase regulator associated with the focal adhesion...   102   1e-21
gi|7662208 GTPase regulator associated with the focal adhesion k...   102   1e-21
gi|50843948 Rho GTPase activating protein 10 [Homo sapiens]           100   3e-21
gi|34013590 Rho GTPase activating protein 2 [Homo sapiens]            100   7e-21
gi|156119615 myosin IXA [Homo sapiens]                                 99   2e-20
gi|82546845 breakpoint cluster region isoform 2 [Homo sapiens]         98   3e-20
gi|82546843 breakpoint cluster region isoform 1 [Homo sapiens]         98   3e-20
gi|203097003 Rho GTPase activating protein 21 [Homo sapiens]           97   5e-20
gi|221307575 Rho-type GTPase-activating protein FLJ32810 [Homo s...    95   2e-19
gi|224458284 Rho GTPase activating protein 23 [Homo sapiens]           94   3e-19
gi|47834348 minor histocompatibility antigen HA-1 [Homo sapiens]       94   5e-19
gi|134304853 PTPL1-associated RhoGAP 1 [Homo sapiens]                  94   5e-19
gi|111154090 Rho GTPase activating protein 24 isoform 3 [Homo sa...    93   8e-19
gi|111154099 Rho GTPase activating protein 24 isoform 2 [Homo sa...    93   8e-19
gi|111154092 Rho GTPase activating protein 24 isoform 1 [Homo sa...    93   8e-19
gi|226693398 Rho GTPase activating protein 27 isoform b [Homo sa...    92   1e-18
gi|40548322 Rho GTPase activating protein 27 isoform a [Homo sap...    92   1e-18
gi|4505507 oligophrenin 1 [Homo sapiens]                               92   1e-18

>gi|186910302 Rac GTPase activating protein 1 [Homo sapiens]
          Length = 632

 Score = 1253 bits (3243), Expect = 0.0
 Identities = 632/632 (100%), Positives = 632/632 (100%)

Query: 1   MDTMMLNVRNLFEQLVRRVEILSEGNEVQFIQLAKDFEDFRKKWQRTDHELGKYKDLLMK 60
           MDTMMLNVRNLFEQLVRRVEILSEGNEVQFIQLAKDFEDFRKKWQRTDHELGKYKDLLMK
Sbjct: 1   MDTMMLNVRNLFEQLVRRVEILSEGNEVQFIQLAKDFEDFRKKWQRTDHELGKYKDLLMK 60

Query: 61  AETERSALDVKLKHARNQVDVEIKRRQRAEADCEKLERQIQLIREMLMCDTSGSIQLSEE 120
           AETERSALDVKLKHARNQVDVEIKRRQRAEADCEKLERQIQLIREMLMCDTSGSIQLSEE
Sbjct: 61  AETERSALDVKLKHARNQVDVEIKRRQRAEADCEKLERQIQLIREMLMCDTSGSIQLSEE 120

Query: 121 QKSALAFLNRGQPSSSNAGNKRLSTIDESGSILSDISFDKTDESLDWDSSLVKTFKLKKR 180
           QKSALAFLNRGQPSSSNAGNKRLSTIDESGSILSDISFDKTDESLDWDSSLVKTFKLKKR
Sbjct: 121 QKSALAFLNRGQPSSSNAGNKRLSTIDESGSILSDISFDKTDESLDWDSSLVKTFKLKKR 180

Query: 181 EKRRSTSRQFVDGPPGPVKKTRSIGSAVDQGNESIVAKTTVTVPNDGGPIEAVSTIETVP 240
           EKRRSTSRQFVDGPPGPVKKTRSIGSAVDQGNESIVAKTTVTVPNDGGPIEAVSTIETVP
Sbjct: 181 EKRRSTSRQFVDGPPGPVKKTRSIGSAVDQGNESIVAKTTVTVPNDGGPIEAVSTIETVP 240

Query: 241 YWTRSRRKTGTLQPWNSDSTLNSRQLEPRTETDSVGTPQSNGGMRLHDFVSKTVIKPESC 300
           YWTRSRRKTGTLQPWNSDSTLNSRQLEPRTETDSVGTPQSNGGMRLHDFVSKTVIKPESC
Sbjct: 241 YWTRSRRKTGTLQPWNSDSTLNSRQLEPRTETDSVGTPQSNGGMRLHDFVSKTVIKPESC 300

Query: 301 VPCGKRIKFGKLSLKCRDCRVVSHPECRDRCPLPCIPTLIGTPVKIGEGMLADFVSQTSP 360
           VPCGKRIKFGKLSLKCRDCRVVSHPECRDRCPLPCIPTLIGTPVKIGEGMLADFVSQTSP
Sbjct: 301 VPCGKRIKFGKLSLKCRDCRVVSHPECRDRCPLPCIPTLIGTPVKIGEGMLADFVSQTSP 360

Query: 361 MIPSIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKFLRVKTVPLLSKVDDIHAICS 420
           MIPSIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKFLRVKTVPLLSKVDDIHAICS
Sbjct: 361 MIPSIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKFLRVKTVPLLSKVDDIHAICS 420

Query: 421 LLKDFLRNLKEPLLTFRLNRAFMEAAEITDEDNSIAAMYQAVGELPQANRDTLAFLMIHL 480
           LLKDFLRNLKEPLLTFRLNRAFMEAAEITDEDNSIAAMYQAVGELPQANRDTLAFLMIHL
Sbjct: 421 LLKDFLRNLKEPLLTFRLNRAFMEAAEITDEDNSIAAMYQAVGELPQANRDTLAFLMIHL 480

Query: 481 QRVAQSPHTKMDVANLAKVFGPTIVAHAVPNPDPVTMLQDIKRQPKVVERLLSLPLEYWS 540
           QRVAQSPHTKMDVANLAKVFGPTIVAHAVPNPDPVTMLQDIKRQPKVVERLLSLPLEYWS
Sbjct: 481 QRVAQSPHTKMDVANLAKVFGPTIVAHAVPNPDPVTMLQDIKRQPKVVERLLSLPLEYWS 540

Query: 541 QFMMVEQENIDPLHVIENSNAFSTPQTPDIKVSLLGPVTTPEHQLLKTPSSSSLSQRVRS 600
           QFMMVEQENIDPLHVIENSNAFSTPQTPDIKVSLLGPVTTPEHQLLKTPSSSSLSQRVRS
Sbjct: 541 QFMMVEQENIDPLHVIENSNAFSTPQTPDIKVSLLGPVTTPEHQLLKTPSSSSLSQRVRS 600

Query: 601 TLTKNTPRFGSKSKSATNLGRQGNFFASPMLK 632
           TLTKNTPRFGSKSKSATNLGRQGNFFASPMLK
Sbjct: 601 TLTKNTPRFGSKSKSATNLGRQGNFFASPMLK 632


>gi|186910300 Rac GTPase activating protein 1 [Homo sapiens]
          Length = 632

 Score = 1253 bits (3243), Expect = 0.0
 Identities = 632/632 (100%), Positives = 632/632 (100%)

Query: 1   MDTMMLNVRNLFEQLVRRVEILSEGNEVQFIQLAKDFEDFRKKWQRTDHELGKYKDLLMK 60
           MDTMMLNVRNLFEQLVRRVEILSEGNEVQFIQLAKDFEDFRKKWQRTDHELGKYKDLLMK
Sbjct: 1   MDTMMLNVRNLFEQLVRRVEILSEGNEVQFIQLAKDFEDFRKKWQRTDHELGKYKDLLMK 60

Query: 61  AETERSALDVKLKHARNQVDVEIKRRQRAEADCEKLERQIQLIREMLMCDTSGSIQLSEE 120
           AETERSALDVKLKHARNQVDVEIKRRQRAEADCEKLERQIQLIREMLMCDTSGSIQLSEE
Sbjct: 61  AETERSALDVKLKHARNQVDVEIKRRQRAEADCEKLERQIQLIREMLMCDTSGSIQLSEE 120

Query: 121 QKSALAFLNRGQPSSSNAGNKRLSTIDESGSILSDISFDKTDESLDWDSSLVKTFKLKKR 180
           QKSALAFLNRGQPSSSNAGNKRLSTIDESGSILSDISFDKTDESLDWDSSLVKTFKLKKR
Sbjct: 121 QKSALAFLNRGQPSSSNAGNKRLSTIDESGSILSDISFDKTDESLDWDSSLVKTFKLKKR 180

Query: 181 EKRRSTSRQFVDGPPGPVKKTRSIGSAVDQGNESIVAKTTVTVPNDGGPIEAVSTIETVP 240
           EKRRSTSRQFVDGPPGPVKKTRSIGSAVDQGNESIVAKTTVTVPNDGGPIEAVSTIETVP
Sbjct: 181 EKRRSTSRQFVDGPPGPVKKTRSIGSAVDQGNESIVAKTTVTVPNDGGPIEAVSTIETVP 240

Query: 241 YWTRSRRKTGTLQPWNSDSTLNSRQLEPRTETDSVGTPQSNGGMRLHDFVSKTVIKPESC 300
           YWTRSRRKTGTLQPWNSDSTLNSRQLEPRTETDSVGTPQSNGGMRLHDFVSKTVIKPESC
Sbjct: 241 YWTRSRRKTGTLQPWNSDSTLNSRQLEPRTETDSVGTPQSNGGMRLHDFVSKTVIKPESC 300

Query: 301 VPCGKRIKFGKLSLKCRDCRVVSHPECRDRCPLPCIPTLIGTPVKIGEGMLADFVSQTSP 360
           VPCGKRIKFGKLSLKCRDCRVVSHPECRDRCPLPCIPTLIGTPVKIGEGMLADFVSQTSP
Sbjct: 301 VPCGKRIKFGKLSLKCRDCRVVSHPECRDRCPLPCIPTLIGTPVKIGEGMLADFVSQTSP 360

Query: 361 MIPSIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKFLRVKTVPLLSKVDDIHAICS 420
           MIPSIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKFLRVKTVPLLSKVDDIHAICS
Sbjct: 361 MIPSIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKFLRVKTVPLLSKVDDIHAICS 420

Query: 421 LLKDFLRNLKEPLLTFRLNRAFMEAAEITDEDNSIAAMYQAVGELPQANRDTLAFLMIHL 480
           LLKDFLRNLKEPLLTFRLNRAFMEAAEITDEDNSIAAMYQAVGELPQANRDTLAFLMIHL
Sbjct: 421 LLKDFLRNLKEPLLTFRLNRAFMEAAEITDEDNSIAAMYQAVGELPQANRDTLAFLMIHL 480

Query: 481 QRVAQSPHTKMDVANLAKVFGPTIVAHAVPNPDPVTMLQDIKRQPKVVERLLSLPLEYWS 540
           QRVAQSPHTKMDVANLAKVFGPTIVAHAVPNPDPVTMLQDIKRQPKVVERLLSLPLEYWS
Sbjct: 481 QRVAQSPHTKMDVANLAKVFGPTIVAHAVPNPDPVTMLQDIKRQPKVVERLLSLPLEYWS 540

Query: 541 QFMMVEQENIDPLHVIENSNAFSTPQTPDIKVSLLGPVTTPEHQLLKTPSSSSLSQRVRS 600
           QFMMVEQENIDPLHVIENSNAFSTPQTPDIKVSLLGPVTTPEHQLLKTPSSSSLSQRVRS
Sbjct: 541 QFMMVEQENIDPLHVIENSNAFSTPQTPDIKVSLLGPVTTPEHQLLKTPSSSSLSQRVRS 600

Query: 601 TLTKNTPRFGSKSKSATNLGRQGNFFASPMLK 632
           TLTKNTPRFGSKSKSATNLGRQGNFFASPMLK
Sbjct: 601 TLTKNTPRFGSKSKSATNLGRQGNFFASPMLK 632


>gi|21361397 Rac GTPase activating protein 1 [Homo sapiens]
          Length = 632

 Score = 1253 bits (3243), Expect = 0.0
 Identities = 632/632 (100%), Positives = 632/632 (100%)

Query: 1   MDTMMLNVRNLFEQLVRRVEILSEGNEVQFIQLAKDFEDFRKKWQRTDHELGKYKDLLMK 60
           MDTMMLNVRNLFEQLVRRVEILSEGNEVQFIQLAKDFEDFRKKWQRTDHELGKYKDLLMK
Sbjct: 1   MDTMMLNVRNLFEQLVRRVEILSEGNEVQFIQLAKDFEDFRKKWQRTDHELGKYKDLLMK 60

Query: 61  AETERSALDVKLKHARNQVDVEIKRRQRAEADCEKLERQIQLIREMLMCDTSGSIQLSEE 120
           AETERSALDVKLKHARNQVDVEIKRRQRAEADCEKLERQIQLIREMLMCDTSGSIQLSEE
Sbjct: 61  AETERSALDVKLKHARNQVDVEIKRRQRAEADCEKLERQIQLIREMLMCDTSGSIQLSEE 120

Query: 121 QKSALAFLNRGQPSSSNAGNKRLSTIDESGSILSDISFDKTDESLDWDSSLVKTFKLKKR 180
           QKSALAFLNRGQPSSSNAGNKRLSTIDESGSILSDISFDKTDESLDWDSSLVKTFKLKKR
Sbjct: 121 QKSALAFLNRGQPSSSNAGNKRLSTIDESGSILSDISFDKTDESLDWDSSLVKTFKLKKR 180

Query: 181 EKRRSTSRQFVDGPPGPVKKTRSIGSAVDQGNESIVAKTTVTVPNDGGPIEAVSTIETVP 240
           EKRRSTSRQFVDGPPGPVKKTRSIGSAVDQGNESIVAKTTVTVPNDGGPIEAVSTIETVP
Sbjct: 181 EKRRSTSRQFVDGPPGPVKKTRSIGSAVDQGNESIVAKTTVTVPNDGGPIEAVSTIETVP 240

Query: 241 YWTRSRRKTGTLQPWNSDSTLNSRQLEPRTETDSVGTPQSNGGMRLHDFVSKTVIKPESC 300
           YWTRSRRKTGTLQPWNSDSTLNSRQLEPRTETDSVGTPQSNGGMRLHDFVSKTVIKPESC
Sbjct: 241 YWTRSRRKTGTLQPWNSDSTLNSRQLEPRTETDSVGTPQSNGGMRLHDFVSKTVIKPESC 300

Query: 301 VPCGKRIKFGKLSLKCRDCRVVSHPECRDRCPLPCIPTLIGTPVKIGEGMLADFVSQTSP 360
           VPCGKRIKFGKLSLKCRDCRVVSHPECRDRCPLPCIPTLIGTPVKIGEGMLADFVSQTSP
Sbjct: 301 VPCGKRIKFGKLSLKCRDCRVVSHPECRDRCPLPCIPTLIGTPVKIGEGMLADFVSQTSP 360

Query: 361 MIPSIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKFLRVKTVPLLSKVDDIHAICS 420
           MIPSIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKFLRVKTVPLLSKVDDIHAICS
Sbjct: 361 MIPSIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKFLRVKTVPLLSKVDDIHAICS 420

Query: 421 LLKDFLRNLKEPLLTFRLNRAFMEAAEITDEDNSIAAMYQAVGELPQANRDTLAFLMIHL 480
           LLKDFLRNLKEPLLTFRLNRAFMEAAEITDEDNSIAAMYQAVGELPQANRDTLAFLMIHL
Sbjct: 421 LLKDFLRNLKEPLLTFRLNRAFMEAAEITDEDNSIAAMYQAVGELPQANRDTLAFLMIHL 480

Query: 481 QRVAQSPHTKMDVANLAKVFGPTIVAHAVPNPDPVTMLQDIKRQPKVVERLLSLPLEYWS 540
           QRVAQSPHTKMDVANLAKVFGPTIVAHAVPNPDPVTMLQDIKRQPKVVERLLSLPLEYWS
Sbjct: 481 QRVAQSPHTKMDVANLAKVFGPTIVAHAVPNPDPVTMLQDIKRQPKVVERLLSLPLEYWS 540

Query: 541 QFMMVEQENIDPLHVIENSNAFSTPQTPDIKVSLLGPVTTPEHQLLKTPSSSSLSQRVRS 600
           QFMMVEQENIDPLHVIENSNAFSTPQTPDIKVSLLGPVTTPEHQLLKTPSSSSLSQRVRS
Sbjct: 541 QFMMVEQENIDPLHVIENSNAFSTPQTPDIKVSLLGPVTTPEHQLLKTPSSSSLSQRVRS 600

Query: 601 TLTKNTPRFGSKSKSATNLGRQGNFFASPMLK 632
           TLTKNTPRFGSKSKSATNLGRQGNFFASPMLK
Sbjct: 601 TLTKNTPRFGSKSKSATNLGRQGNFFASPMLK 632


>gi|4502813 chimerin (chimaerin) 1 isoform a [Homo sapiens]
          Length = 459

 Score =  125 bits (314), Expect = 1e-28
 Identities = 85/253 (33%), Positives = 129/253 (50%), Gaps = 9/253 (3%)

Query: 285 RLHDFVSKTVIKPESCVPCGKRIKFGKLS--LKCRDCRVVSHPECRDRCPLPCIPTLIGT 342
           ++H+F   T   P  C  C     +G ++  +KC DC +  H +C    P  C P L   
Sbjct: 204 KIHNFKVHTFRGPHWCEYCAN-FMWGLIAQGVKCADCGLNVHKQCSKMVPNDCKPDLKHV 262

Query: 343 PVKIGEGMLADFVSQTSPMIPSIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKFLR 402
             K+    L   V   +   P +V  C+ EIE RGL   GLYR+SG    ++++K  F R
Sbjct: 263 K-KVYSCDLTTLVKAHTTKRPMVVDMCIREIESRGLNSEGLYRVSGFSDLIEDVKMAFDR 321

Query: 403 --VKTVPLLSKVDDIHAICSLLKDFLRNLKEPLLTFRLNRAFMEAAEITDEDNSIAAMYQ 460
              K    ++  +DI+ I   LK + R+L  PL+T+     F+E+A+I D D  +  +++
Sbjct: 322 DGEKADISVNMYEDINIITGALKLYFRDLPIPLITYDAYPKFIESAKIMDPDEQLETLHE 381

Query: 461 AVGELPQANRDTLAFLMIHLQRVA-QSPHTKMDVANLAKVFGPTIVAHAVPNPDPVTMLQ 519
           A+  LP A+ +TL +LM HL+RV        M+  NL  VFGPT++    P  D +  L 
Sbjct: 382 ALKLLPPAHCETLRYLMAHLKRVTLHEKENLMNAENLGIVFGPTLMRS--PELDAMAALN 439

Query: 520 DIKRQPKVVERLL 532
           DI+ Q  VVE L+
Sbjct: 440 DIRYQRLVVELLI 452


>gi|209364623 chimerin (chimaerin) 1 isoform b [Homo sapiens]
          Length = 433

 Score =  122 bits (305), Expect = 1e-27
 Identities = 90/271 (33%), Positives = 132/271 (48%), Gaps = 15/271 (5%)

Query: 267 EPRTETDSVGTPQSNGGMRLHDFVSKTVIKPESCVPCGKRIKFGKLS--LKCRDCRVVSH 324
           E   E DS G        R+H F       P  C  C     +G ++  +KC DC +  H
Sbjct: 166 ETHDERDSTGQ-DGVSEKRVHTFRG-----PHWCEYCAN-FMWGLIAQGVKCADCGLNVH 218

Query: 325 PECRDRCPLPCIPTLIGTPVKIGEGMLADFVSQTSPMIPSIVVHCVNEIEQRGLTETGLY 384
            +C    P  C P L     K+    L   V   +   P +V  C+ EIE RGL   GLY
Sbjct: 219 KQCSKMVPNDCKPDLKHVK-KVYSCDLTTLVKAHTTKRPMVVDMCIREIESRGLNSEGLY 277

Query: 385 RISGCDRTVKELKEKFLR--VKTVPLLSKVDDIHAICSLLKDFLRNLKEPLLTFRLNRAF 442
           R+SG    ++++K  F R   K    ++  +DI+ I   LK + R+L  PL+T+     F
Sbjct: 278 RVSGFSDLIEDVKMAFDRDGEKADISVNMYEDINIITGALKLYFRDLPIPLITYDAYPKF 337

Query: 443 MEAAEITDEDNSIAAMYQAVGELPQANRDTLAFLMIHLQRVA-QSPHTKMDVANLAKVFG 501
           +E+A+I D D  +  +++A+  LP A+ +TL +LM HL+RV        M+  NL  VFG
Sbjct: 338 IESAKIMDPDEQLETLHEALKLLPPAHCETLRYLMAHLKRVTLHEKENLMNAENLGIVFG 397

Query: 502 PTIVAHAVPNPDPVTMLQDIKRQPKVVERLL 532
           PT++    P  D +  L DI+ Q  VVE L+
Sbjct: 398 PTLMRS--PELDAMAALNDIRYQRLVVELLI 426


>gi|194272142 myosin IXB isoform 2 [Homo sapiens]
          Length = 2022

 Score =  118 bits (295), Expect = 2e-26
 Identities = 85/279 (30%), Positives = 137/279 (49%), Gaps = 15/279 (5%)

Query: 287  HDFVSKTVIKPESCVPCGKRIKFGKLSLKCRDCRVVSHPECRDRCPLPCIPTL--IGTP- 343
            H F S  V  P+SC  C   I     +L C  C++  H +C  +    C  T    G P 
Sbjct: 1633 HVFASYQVSIPQSCEQCLSYIWLMDKALLCSVCKMTCHKKCVHKIQSHCSYTYGRKGEPG 1692

Query: 344  VKIGE-GMLADFVSQTSPMIPSIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKFLR 402
            V+ G  G+  D ++     +P ++   +  +E  GL   GLYR SG     +EL++    
Sbjct: 1693 VEPGHFGVCVDSLTSDKASVPIVLEKLLEHVEMHGLYTEGLYRKSGAANRTRELRQA--- 1749

Query: 403  VKTVPLLSKVDD--IHAICSLLKDFLRNLKEPLLTFRLNRAFMEAAEITDEDNSIAAMYQ 460
            ++T P   K+++  IHAI  +LK +LR L EPL+TF     F+ A E+ ++   +AA+Y 
Sbjct: 1750 LQTDPAAVKLENFPIHAITGVLKQWLRELPEPLMTFAQYGDFLRAVELPEKQEQLAAIYA 1809

Query: 461  AVGELPQANRDTLAFLMIHLQRVA-QSPHTKMDVANLAKVFGPTIVAHAVPNPDPVTMLQ 519
             +  LP+AN ++L  L+ HL +VA      +M    LA +F P ++     N DP+T ++
Sbjct: 1810 VLEHLPEANHNSLERLIFHLVKVALLEDVNRMSPGALAIIFAPCLL-RCPDNSDPLTSMK 1868

Query: 520  DIKRQPKVVERLLSLPLEYWSQFMMVEQENIDPLHVIEN 558
            D+ +    VE L+   +  +     V+ E I  L   E+
Sbjct: 1869 DVLKITTCVEMLIKEQMRKYK----VKMEEISQLEAAES 1903


>gi|33356170 myosin IXB isoform 1 [Homo sapiens]
          Length = 2157

 Score =  118 bits (295), Expect = 2e-26
 Identities = 85/279 (30%), Positives = 137/279 (49%), Gaps = 15/279 (5%)

Query: 287  HDFVSKTVIKPESCVPCGKRIKFGKLSLKCRDCRVVSHPECRDRCPLPCIPTL--IGTP- 343
            H F S  V  P+SC  C   I     +L C  C++  H +C  +    C  T    G P 
Sbjct: 1633 HVFASYQVSIPQSCEQCLSYIWLMDKALLCSVCKMTCHKKCVHKIQSHCSYTYGRKGEPG 1692

Query: 344  VKIGE-GMLADFVSQTSPMIPSIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKFLR 402
            V+ G  G+  D ++     +P ++   +  +E  GL   GLYR SG     +EL++    
Sbjct: 1693 VEPGHFGVCVDSLTSDKASVPIVLEKLLEHVEMHGLYTEGLYRKSGAANRTRELRQA--- 1749

Query: 403  VKTVPLLSKVDD--IHAICSLLKDFLRNLKEPLLTFRLNRAFMEAAEITDEDNSIAAMYQ 460
            ++T P   K+++  IHAI  +LK +LR L EPL+TF     F+ A E+ ++   +AA+Y 
Sbjct: 1750 LQTDPAAVKLENFPIHAITGVLKQWLRELPEPLMTFAQYGDFLRAVELPEKQEQLAAIYA 1809

Query: 461  AVGELPQANRDTLAFLMIHLQRVA-QSPHTKMDVANLAKVFGPTIVAHAVPNPDPVTMLQ 519
             +  LP+AN ++L  L+ HL +VA      +M    LA +F P ++     N DP+T ++
Sbjct: 1810 VLEHLPEANHNSLERLIFHLVKVALLEDVNRMSPGALAIIFAPCLL-RCPDNSDPLTSMK 1868

Query: 520  DIKRQPKVVERLLSLPLEYWSQFMMVEQENIDPLHVIEN 558
            D+ +    VE L+   +  +     V+ E I  L   E+
Sbjct: 1869 DVLKITTCVEMLIKEQMRKYK----VKMEEISQLEAAES 1903


>gi|4757980 beta chimerin isoform 2 [Homo sapiens]
          Length = 468

 Score =  114 bits (285), Expect = 3e-25
 Identities = 79/253 (31%), Positives = 129/253 (50%), Gaps = 9/253 (3%)

Query: 285 RLHDFVSKTVIKPESCVPCGKRIKFGKLS--LKCRDCRVVSHPECRDRCPLPCIPTLIGT 342
           + H+F   T   P  C  C     +G ++  ++C DC +  H +C    P  C P L   
Sbjct: 213 KTHNFKVHTFRGPHWCEYCAN-FMWGLIAQGVRCSDCGLNVHKQCSKHVPNDCQPDLKRI 271

Query: 343 PVKIGEGMLADFVSQTSPMIPSIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKFLR 402
             K+    L   V   +   P +V  C+ EIE RGL   GLYR+SG    ++++K  F R
Sbjct: 272 K-KVYCCDLTTLVKAHNTQRPMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDR 330

Query: 403 --VKTVPLLSKVDDIHAICSLLKDFLRNLKEPLLTFRLNRAFMEAAEITDEDNSIAAMYQ 460
              K     +   DI+ I   LK + R+L  P++T+     F++AA+I++ D  + A+++
Sbjct: 331 DGEKADISANVYPDINIITGALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHE 390

Query: 461 AVGELPQANRDTLAFLMIHLQRVAQSPHTK-MDVANLAKVFGPTIVAHAVPNPDPVTMLQ 519
            +  LP A+ +TL +LMIHL++V  +     M+  NL  VFGPT++    P    +T L 
Sbjct: 391 VLMLLPPAHYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTLM--RPPEDSTLTTLH 448

Query: 520 DIKRQPKVVERLL 532
           D++ Q  +V+ L+
Sbjct: 449 DMRYQKLIVQILI 461


>gi|91106928 beta chimerin isoform 1 [Homo sapiens]
          Length = 332

 Score =  114 bits (285), Expect = 3e-25
 Identities = 79/253 (31%), Positives = 129/253 (50%), Gaps = 9/253 (3%)

Query: 285 RLHDFVSKTVIKPESCVPCGKRIKFGKLS--LKCRDCRVVSHPECRDRCPLPCIPTLIGT 342
           + H+F   T   P  C  C     +G ++  ++C DC +  H +C    P  C P L   
Sbjct: 77  KTHNFKVHTFRGPHWCEYCAN-FMWGLIAQGVRCSDCGLNVHKQCSKHVPNDCQPDLKRI 135

Query: 343 PVKIGEGMLADFVSQTSPMIPSIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKFLR 402
             K+    L   V   +   P +V  C+ EIE RGL   GLYR+SG    ++++K  F R
Sbjct: 136 K-KVYCCDLTTLVKAHNTQRPMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDR 194

Query: 403 --VKTVPLLSKVDDIHAICSLLKDFLRNLKEPLLTFRLNRAFMEAAEITDEDNSIAAMYQ 460
              K     +   DI+ I   LK + R+L  P++T+     F++AA+I++ D  + A+++
Sbjct: 195 DGEKADISANVYPDINIITGALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHE 254

Query: 461 AVGELPQANRDTLAFLMIHLQRVAQSPHTK-MDVANLAKVFGPTIVAHAVPNPDPVTMLQ 519
            +  LP A+ +TL +LMIHL++V  +     M+  NL  VFGPT++    P    +T L 
Sbjct: 255 VLMLLPPAHYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTLM--RPPEDSTLTTLH 312

Query: 520 DIKRQPKVVERLL 532
           D++ Q  +V+ L+
Sbjct: 313 DMRYQKLIVQILI 325


>gi|229094128 active breakpoint cluster region-related  protein
           isoform c [Homo sapiens]
          Length = 813

 Score =  106 bits (264), Expect = 7e-23
 Identities = 64/146 (43%), Positives = 84/146 (57%), Gaps = 2/146 (1%)

Query: 362 IPSIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKF-LRVKTVPLLSKVDDIHAICS 420
           +P IV  CV E+E+RG+ E G+YRISG    ++ LK  F    K + L+    DI+AI  
Sbjct: 614 VPYIVRQCVEEVEKRGIEEVGIYRISGVATDIQALKAVFDANNKDILLMLSDMDINAIAG 673

Query: 421 LLKDFLRNLKEPLLTFRLNRAFMEAAEITDEDNSIAAMYQAVGELPQANRDTLAFLMIHL 480
            LK + R L EPLLT RL  AFME   ++D       M   +  LP  N  T  FL+ HL
Sbjct: 674 TLKLYFRELPEPLLTDRLYPAFMEGIALSDPAAKENCMMHLLRSLPDPNLITFLFLLEHL 733

Query: 481 QRVAQ-SPHTKMDVANLAKVFGPTIV 505
           +RVA+  P  KM + NLA VFGPT++
Sbjct: 734 KRVAEKEPINKMSLHNLATVFGPTLL 759


>gi|38679957 active breakpoint cluster region-related  protein
           isoform a [Homo sapiens]
          Length = 859

 Score =  106 bits (264), Expect = 7e-23
 Identities = 64/146 (43%), Positives = 84/146 (57%), Gaps = 2/146 (1%)

Query: 362 IPSIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKF-LRVKTVPLLSKVDDIHAICS 420
           +P IV  CV E+E+RG+ E G+YRISG    ++ LK  F    K + L+    DI+AI  
Sbjct: 660 VPYIVRQCVEEVEKRGIEEVGIYRISGVATDIQALKAVFDANNKDILLMLSDMDINAIAG 719

Query: 421 LLKDFLRNLKEPLLTFRLNRAFMEAAEITDEDNSIAAMYQAVGELPQANRDTLAFLMIHL 480
            LK + R L EPLLT RL  AFME   ++D       M   +  LP  N  T  FL+ HL
Sbjct: 720 TLKLYFRELPEPLLTDRLYPAFMEGIALSDPAAKENCMMHLLRSLPDPNLITFLFLLEHL 779

Query: 481 QRVAQ-SPHTKMDVANLAKVFGPTIV 505
           +RVA+  P  KM + NLA VFGPT++
Sbjct: 780 KRVAEKEPINKMSLHNLATVFGPTLL 805


>gi|38679954 active breakpoint cluster region-related  protein
           isoform b [Homo sapiens]
          Length = 822

 Score =  106 bits (264), Expect = 7e-23
 Identities = 64/146 (43%), Positives = 84/146 (57%), Gaps = 2/146 (1%)

Query: 362 IPSIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKF-LRVKTVPLLSKVDDIHAICS 420
           +P IV  CV E+E+RG+ E G+YRISG    ++ LK  F    K + L+    DI+AI  
Sbjct: 623 VPYIVRQCVEEVEKRGIEEVGIYRISGVATDIQALKAVFDANNKDILLMLSDMDINAIAG 682

Query: 421 LLKDFLRNLKEPLLTFRLNRAFMEAAEITDEDNSIAAMYQAVGELPQANRDTLAFLMIHL 480
            LK + R L EPLLT RL  AFME   ++D       M   +  LP  N  T  FL+ HL
Sbjct: 683 TLKLYFRELPEPLLTDRLYPAFMEGIALSDPAAKENCMMHLLRSLPDPNLITFLFLLEHL 742

Query: 481 QRVAQ-SPHTKMDVANLAKVFGPTIV 505
           +RVA+  P  KM + NLA VFGPT++
Sbjct: 743 KRVAEKEPINKMSLHNLATVFGPTLL 768


>gi|208022687 GTPase regulator associated with the focal adhesion
           kinase pp125 isoform b [Homo sapiens]
          Length = 759

 Score =  102 bits (254), Expect = 1e-21
 Identities = 63/175 (36%), Positives = 100/175 (57%), Gaps = 10/175 (5%)

Query: 364 SIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKFLRVKTVPLLSKVD-----DIHAI 418
           SI+  C++ +E RG+ E GLYRI G +  V++L    +  KT    ++ D     +I  I
Sbjct: 391 SIIRKCIHAVETRGINEQGLYRIVGVNSRVQKLLSVLMDPKTASE-TETDICAEWEIKTI 449

Query: 419 CSLLKDFLRNLKEPLLTFRLNRAFMEAAEITDEDNSIAAMYQAVGELPQANRDTLAFLMI 478
            S LK +LR L  PL+ ++  R+F++AA++ ++++ ++ ++  V  LP+ NR  L  LM 
Sbjct: 450 TSALKTYLRMLPGPLMMYQFQRSFIKAAKLENQESRVSEIHSLVHRLPEKNRQMLQLLMN 509

Query: 479 HLQRVAQS-PHTKMDVANLAKVFGPTIVAHAVPNPDPVTMLQDIKRQPKVVERLL 532
           HL  VA +     M VANL  VFGPT++    P  + V  + DIK Q  V+E L+
Sbjct: 510 HLANVANNHKQNLMTVANLGVVFGPTLLR---PQEETVAAIMDIKFQNIVIEILI 561


>gi|7662208 GTPase regulator associated with the focal adhesion
           kinase pp125 isoform a [Homo sapiens]
          Length = 814

 Score =  102 bits (254), Expect = 1e-21
 Identities = 63/175 (36%), Positives = 100/175 (57%), Gaps = 10/175 (5%)

Query: 364 SIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKFLRVKTVPLLSKVD-----DIHAI 418
           SI+  C++ +E RG+ E GLYRI G +  V++L    +  KT    ++ D     +I  I
Sbjct: 391 SIIRKCIHAVETRGINEQGLYRIVGVNSRVQKLLSVLMDPKTASE-TETDICAEWEIKTI 449

Query: 419 CSLLKDFLRNLKEPLLTFRLNRAFMEAAEITDEDNSIAAMYQAVGELPQANRDTLAFLMI 478
            S LK +LR L  PL+ ++  R+F++AA++ ++++ ++ ++  V  LP+ NR  L  LM 
Sbjct: 450 TSALKTYLRMLPGPLMMYQFQRSFIKAAKLENQESRVSEIHSLVHRLPEKNRQMLQLLMN 509

Query: 479 HLQRVAQS-PHTKMDVANLAKVFGPTIVAHAVPNPDPVTMLQDIKRQPKVVERLL 532
           HL  VA +     M VANL  VFGPT++    P  + V  + DIK Q  V+E L+
Sbjct: 510 HLANVANNHKQNLMTVANLGVVFGPTLLR---PQEETVAAIMDIKFQNIVIEILI 561


>gi|50843948 Rho GTPase activating protein 10 [Homo sapiens]
          Length = 786

 Score =  100 bits (250), Expect = 3e-21
 Identities = 65/182 (35%), Positives = 102/182 (56%), Gaps = 8/182 (4%)

Query: 356 SQTSPMIPSIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKFLRVKT---VPLLSKV 412
           +Q   M  +I+  C++ +E RG+ + GLYR+ G    V+ L    + VKT   V L +  
Sbjct: 389 AQLDKMGFTIIRKCISAVETRGINDQGLYRVVGVSSKVQRLLSMLMDVKTCNEVDLENSA 448

Query: 413 D-DIHAICSLLKDFLRNLKEPLLTFRLNRAFMEAAEITDEDNSIAAMYQAVGELPQANRD 471
           D ++  I S LK +LR+L EPL+T+ L+  F+  A+    ++ + A++  V +LP+ N++
Sbjct: 449 DWEVKTITSALKQYLRSLPEPLMTYELHGDFIVPAKSGSPESRVNAIHFLVHKLPEKNKE 508

Query: 472 TLAFLMIHLQRVA-QSPHTKMDVANLAKVFGPTIVAHAVPNPDPVTMLQDIKRQPKVVER 530
            L  L+ HL  V+  S    M VANL  VFGPT++    P  + V  L D+K Q  VVE 
Sbjct: 509 MLDILVKHLTNVSNHSKQNLMTVANLGVVFGPTLMR---PQEETVAALMDLKFQNIVVEI 565

Query: 531 LL 532
           L+
Sbjct: 566 LI 567


>gi|34013590 Rho GTPase activating protein 2 [Homo sapiens]
          Length = 698

 Score = 99.8 bits (247), Expect = 7e-21
 Identities = 66/184 (35%), Positives = 99/184 (53%), Gaps = 10/184 (5%)

Query: 361 MIPSIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKFLRVKTVPLLSKVDDIHAICS 420
           + P +V  CV+ I +RGLTE GL+R+ G    V++L++ F      PL     D+H + S
Sbjct: 171 LAPLLVEQCVDFIRERGLTEEGLFRMPGQANLVRDLQDSF-DCGEKPLFDSTTDVHTVAS 229

Query: 421 LLKDFLRNLKEPLLTFRLNRAFMEAAEI--TDEDNSIAAMYQAVGELPQANRDTLAFLMI 478
           LLK +LR L EP++ F     F+  A++   DE      + + V  LPQAN + L ++  
Sbjct: 230 LLKLYLRELPEPVVPFARYEDFLSCAQLLTKDEGEGTLELAKQVSNLPQANYNLLRYICK 289

Query: 479 HLQRV-AQSPHTKMDVANLAKVFGPTIVAHAVPNPDPVTMLQDIKRQPKVVERLLSLPLE 537
            L  V A S   KM V NLA VFGP I+   V   DPVT+++       +V+ L+++ + 
Sbjct: 290 FLDEVQAYSNVNKMSVQNLATVFGPNILRPQV--EDPVTIMEG----TSLVQHLMTVLIR 343

Query: 538 YWSQ 541
             SQ
Sbjct: 344 KHSQ 347


>gi|156119615 myosin IXA [Homo sapiens]
          Length = 2548

 Score = 98.6 bits (244), Expect = 2e-20
 Identities = 77/272 (28%), Positives = 121/272 (44%), Gaps = 13/272 (4%)

Query: 264  RQLEPRTETDSVGTPQSNGGMRLHDFVSKTVIKPESCVPCGKRIKFGKLSLKCRDCRVVS 323
            R+   + ETD V   + NG    H F +     P  C  C   I     +  C+ C+   
Sbjct: 1983 RKKRRKKETDLV--EEHNG----HIFKATQYSIPTYCEYCSSLIWIMDRASVCKLCKYAC 2036

Query: 324  HPECRDRCPLPCIPTLIGTPVKIGEGMLADFVSQTSPMIPSIVVHCVNEIEQRGLTETGL 383
            H +C  +    C             G+    ++     +P +V   +N IE  GL   G+
Sbjct: 2037 HKKCCLKTTAKCSKKYDPELSSRQFGVELSRLTSEDRTVPLVVEKLINYIEMHGLYTEGI 2096

Query: 384  YRISGCDRTVKELKEKFLRVKTVPLLSKVDD--IHAICSLLKDFLRNLKEPLLTFRLNRA 441
            YR SG    +KEL++    + T      +DD  IH I S+ K +LR+L  PL+TF L   
Sbjct: 2097 YRKSGSTNKIKELRQG---LDTDAESVNLDDYNIHVIASVFKQWLRDLPNPLMTFELYEE 2153

Query: 442  FMEAAEITDEDNSIAAMYQAVGELPQANRDTLAFLMIHLQRVA-QSPHTKMDVANLAKVF 500
            F+ A  + +   +I  +Y  + +L + + +TL  L+ HL R+A Q    +M    LA VF
Sbjct: 2154 FLRAMGLQERKETIRGVYSVIDQLSRTHLNTLERLIFHLVRIALQEDTNRMSANALAIVF 2213

Query: 501  GPTIVAHAVPNPDPVTMLQDIKRQPKVVERLL 532
             P I+       DP+  +QDI +    VE ++
Sbjct: 2214 APCIL-RCPDTTDPLQSVQDISKTTTCVELIV 2244


>gi|82546845 breakpoint cluster region isoform 2 [Homo sapiens]
          Length = 1227

 Score = 97.8 bits (242), Expect = 3e-20
 Identities = 58/146 (39%), Positives = 82/146 (56%), Gaps = 2/146 (1%)

Query: 362  IPSIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKF-LRVKTVPLLSKVDDIHAICS 420
            +P IV  CV EIE+RG+ E G+YR+SG    ++ LK  F +  K V ++    D++AI  
Sbjct: 1023 VPYIVRQCVEEIERRGMEEVGIYRVSGVATDIQALKAAFDVNNKDVSVMMSEMDVNAIAG 1082

Query: 421  LLKDFLRNLKEPLLTFRLNRAFMEAAEITDEDNSIAAMYQAVGELPQANRDTLAFLMIHL 480
             LK + R L EPL T      F E   ++D     + M   +  LP+AN  T  FL+ HL
Sbjct: 1083 TLKLYFRELPEPLFTDEFYPNFAEGIALSDPVAKESCMLNLLLSLPEANLLTFLFLLDHL 1142

Query: 481  QRVAQSPH-TKMDVANLAKVFGPTIV 505
            +RVA+     KM + NLA VFGPT++
Sbjct: 1143 KRVAEKEAVNKMSLHNLATVFGPTLL 1168


>gi|82546843 breakpoint cluster region isoform 1 [Homo sapiens]
          Length = 1271

 Score = 97.8 bits (242), Expect = 3e-20
 Identities = 58/146 (39%), Positives = 82/146 (56%), Gaps = 2/146 (1%)

Query: 362  IPSIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKF-LRVKTVPLLSKVDDIHAICS 420
            +P IV  CV EIE+RG+ E G+YR+SG    ++ LK  F +  K V ++    D++AI  
Sbjct: 1067 VPYIVRQCVEEIERRGMEEVGIYRVSGVATDIQALKAAFDVNNKDVSVMMSEMDVNAIAG 1126

Query: 421  LLKDFLRNLKEPLLTFRLNRAFMEAAEITDEDNSIAAMYQAVGELPQANRDTLAFLMIHL 480
             LK + R L EPL T      F E   ++D     + M   +  LP+AN  T  FL+ HL
Sbjct: 1127 TLKLYFRELPEPLFTDEFYPNFAEGIALSDPVAKESCMLNLLLSLPEANLLTFLFLLDHL 1186

Query: 481  QRVAQSPH-TKMDVANLAKVFGPTIV 505
            +RVA+     KM + NLA VFGPT++
Sbjct: 1187 KRVAEKEAVNKMSLHNLATVFGPTLL 1212


>gi|203097003 Rho GTPase activating protein 21 [Homo sapiens]
          Length = 1958

 Score = 97.1 bits (240), Expect = 5e-20
 Identities = 68/218 (31%), Positives = 112/218 (51%), Gaps = 10/218 (4%)

Query: 356  SQTSPMIPSIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKFLR-VKTVPLLS-KVD 413
            + T+  IP IV  C   +E+RGL  TG+YR+ G +  +  ++E+  + +  + +   K  
Sbjct: 1155 AHTNRYIPLIVDICCKLVEERGLEYTGIYRVPGNNAAISSMQEELNKGMADIDIQDDKWR 1214

Query: 414  DIHAICSLLKDFLRNLKEPLLTFRLNRAFMEAAEITDEDNSIAAMYQAVGELPQANRDTL 473
            D++ I SLLK F R L EPL T      F+EA    D  + +  + + + +LP+ + +TL
Sbjct: 1215 DLNVISSLLKSFFRKLPEPLFTNDKYADFIEANRKEDPLDRLKTLKRLIHDLPEHHYETL 1274

Query: 474  AFLMIHLQRVAQ-SPHTKMDVANLAKVFGPTIVAHAVPNPDPVTMLQDIKRQPKVVERLL 532
             FL  HL+ VA+ S   KM+  NLA VFGPT+V  +  N     M+  +  Q K+VE L+
Sbjct: 1275 KFLSAHLKTVAENSEKNKMEPRNLAIVFGPTLVRTSEDN--MTHMVTHMPDQYKIVETLI 1332

Query: 533  SLPLEYWSQFMMVEQENIDPLHVIENSNAFSTPQTPDI 570
                     +   E+   +PL  ++  +   +   P+I
Sbjct: 1333 Q-----HHDWFFTEEGAEEPLTTVQEESTVDSQPVPNI 1365


>gi|221307575 Rho-type GTPase-activating protein FLJ32810 [Homo
           sapiens]
          Length = 874

 Score = 94.7 bits (234), Expect = 2e-19
 Identities = 60/173 (34%), Positives = 99/173 (57%), Gaps = 7/173 (4%)

Query: 364 SIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKFLRVKTVPLLS---KVDDIHAICS 420
           + V  C+  +E RG+T  GLYRI G +  V++L       K+ P +    ++ D   I S
Sbjct: 396 NFVRKCIQAVETRGITILGLYRIGGVNSKVQKLMNTTFSPKSPPDIDIDIELWDNKTITS 455

Query: 421 LLKDFLRNLKEPLLTFRLNRAFMEAAEITDEDNSIAAMYQAVGELPQANRDTLAFLMIHL 480
            LK++LR L EPL+T++L++ F+ A +  D++  + A++  V +LP+ NR+ L  L+ HL
Sbjct: 456 GLKNYLRCLAEPLMTYKLHKDFIIAVKSDDQNYRVEAVHALVHKLPEKNREMLDILIKHL 515

Query: 481 QRVA-QSPHTKMDVANLAKVFGPTIVAHAVPNPDPVTMLQDIKRQPKVVERLL 532
            +V+  S    M V+NL  +FGPT++       + V  + +IK Q  VVE L+
Sbjct: 516 VKVSLHSQQNLMTVSNLGVIFGPTLMR---AQEETVAAMMNIKFQNIVVEILI 565


>gi|224458284 Rho GTPase activating protein 23 [Homo sapiens]
          Length = 1397

 Score = 94.4 bits (233), Expect = 3e-19
 Identities = 66/175 (37%), Positives = 93/175 (53%), Gaps = 7/175 (4%)

Query: 362 IPSIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKFLRVKTVPLLS--KVDDIHAIC 419
           +P IV  C   +E RGL  TG+YR+ G +  V  L+E+  R      L   +  D++ I 
Sbjct: 825 VPLIVAACCRIVEARGLESTGIYRVPGNNAVVSSLQEQLNRGPGDINLQDERWQDLNVIS 884

Query: 420 SLLKDFLRNLKEPLLTFRLNRAFMEAAEITDEDNSIAAMYQAVGELPQANRDTLAFLMIH 479
           SLLK F R L EPL T      F+EA  I D    +  + + + +LP    +TL FL+ H
Sbjct: 885 SLLKSFFRKLPEPLFTDDKYNDFIEANRIEDARERMRTLRKLIRDLPGHYYETLKFLVGH 944

Query: 480 LQRVA-QSPHTKMDVANLAKVFGPTIVAHAVPN-PDPVTMLQDIKRQPKVVERLL 532
           L+ +A  S   KM+  NLA VFGPT+V  +  N  D VT + D   + K+VE L+
Sbjct: 945 LKTIADHSEKNKMEPRNLALVFGPTLVRTSEDNMTDMVTHMPD---RYKIVETLI 996


>gi|47834348 minor histocompatibility antigen HA-1 [Homo sapiens]
          Length = 1136

 Score = 93.6 bits (231), Expect = 5e-19
 Identities = 72/263 (27%), Positives = 120/263 (45%), Gaps = 33/263 (12%)

Query: 297 PESCVPCGKRIKFGKLSLKCRDCRVVSHPECRDRCPLPCIPTLIGTPVKIGEGMLADFVS 356
           P  C  C   + F     +C +C +  H +C +   + C    +   +++     +    
Sbjct: 711 PAKCRECNSYVYFQ--GAECEECCLACHKKCLETLAIQCGHKKLQGRLQLFGQDFSHAAR 768

Query: 357 QTSPMIPSIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKFLRVKTVPLLSKVDDIH 416
                +P IV  CV EIE+R L   G+YR++G    V++L + F   K +  LS+    H
Sbjct: 769 SAPDGVPFIVKKCVCEIERRALRTKGIYRVNGVKTRVEKLCQAFENGKELVELSQASP-H 827

Query: 417 AICSLLKDFLRNLKEPLLTFRLNRAFMEAAEIT-----------------DEDNSIAA-- 457
            I ++LK +LR L EPL++FRL    +  A+ +                  E  ++A   
Sbjct: 828 DISNVLKLYLRQLPEPLISFRLYHELVGLAKDSLKAEAEAKAASRGRQDGSESEAVAVAL 887

Query: 458 ---MYQAVGELPQANRDTLAFLMIHLQRVAQ-SPHTKMDVANLAKVFGPTIVAHAVPNPD 513
              + + + +LP  NR +L +L+ HL+R+ +     KM   NL  VFGPT++    P P 
Sbjct: 888 AGRLRELLRDLPPENRASLQYLLRHLRRIVEVEQDNKMTPGNLGIVFGPTLLR---PRPT 944

Query: 514 PVTM----LQDIKRQPKVVERLL 532
             T+    L D   Q +V+E L+
Sbjct: 945 EATVSLSSLVDYPHQARVIETLI 967


>gi|134304853 PTPL1-associated RhoGAP 1 [Homo sapiens]
          Length = 1261

 Score = 93.6 bits (231), Expect = 5e-19
 Identities = 138/634 (21%), Positives = 258/634 (40%), Gaps = 98/634 (15%)

Query: 9   RNLFEQLVRRVEILSEGNEVQFIQLAKDFEDFRKKWQRTDHE-LGKYKDLLMKAETERSA 67
           R L E+ +++VE   E NE+  + +  + E+ R   + T  E L + + L+ + +    A
Sbjct: 372 RRLEEEALQKVE---EANELYKVCVT-NVEERRNDLENTKREILAQLRTLVFQCDLTLKA 427

Query: 68  LDVKLKHARNQVDVEIKRRQRAEADCEKLERQIQLIREMLMCDTSGSIQLSEEQK---SA 124
           + V L H ++     +    ++  D  KL    Q   E +    S     +EE+K   + 
Sbjct: 428 VTVNLFHMQHLQAASLADSLQSLCDSAKLYDPGQEYSEFVKATNS-----TEEEKVDGNV 482

Query: 125 LAFLNRGQPSSSNAGNKRLSTI---DESGSILSDISFDKTDESLDWDSSLVKTFKLKKRE 181
              LN  QPS     N     +   D S  I  D   +  D +     S ++++      
Sbjct: 483 NKHLNSSQPSGFGPANSLEDVVRLPDSSNKIEEDRCSNSADIT---GPSFIRSWTFGMFS 539

Query: 182 KRRSTSRQFVDGPPGPVKKTRSIGSAVDQGNESIVAKTTVTVPNDGGPIEAVSTIETVPY 241
              ST         G   ++RS+ S      ESI        P D               
Sbjct: 540 DSEST---------GGSSESRSLDS------ESIS-------PGD--------------- 562

Query: 242 WTRSRRKTGTLQPWNSDSTLNSRQLEPRTET--DSVGTPQS---NGGMRLHDFVSKTVIK 296
           + R   +T +    +S   L+ R+    +ET  +S+GT +    +     H F  + +  
Sbjct: 563 FHRKLPRTPSSGTMSSADDLDEREPPSPSETGPNSLGTFKKTLMSKAALTHKF--RKLRS 620

Query: 297 PESCVPCGKRIKFGKLSLKCRDCRVVSHPECRDRCPLPCIPTLIGTPVKIGEGMLADFVS 356
           P  C  C   + F    ++C +C +V H +C +   + C    +   + +          
Sbjct: 621 PTKCRDCEGIVVFQ--GVECEECLLVCHRKCLENLVIICGHQKLPGKIHLFGAEFTQVAK 678

Query: 357 QTSPMIPSIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKFLRVKTVPLLSKVDDIH 416
           +    IP I+  C +EIE R L   G+YR+ G     ++L +       +  +S+    H
Sbjct: 679 KEPDGIPFILKICASEIENRALCLQGIYRVCGNKIKTEKLCQALENGMHLVDISEFSS-H 737

Query: 417 AICSLLKDFLRNLKEPLLTFRLNRAFMEAAE----ITDEDNS------------------ 454
            IC +LK +LR L EP + FRL + F++ A+    + +E  +                  
Sbjct: 738 DICDVLKLYLRQLPEPFILFRLYKEFIDLAKEIQHVNEEQETKKNSLEDKKWPNMCIEIN 797

Query: 455 --IAAMYQAVGELPQANRDTLAFLMIHLQRVA-QSPHTKMDVANLAKVFGPTIVAHAVPN 511
             +      + +LP +N ++L FL++HL+RV   +   KM+  NL  +FGP+++    P 
Sbjct: 798 RILLKSKDLLRQLPASNFNSLHFLIVHLKRVVDHAEENKMNSKNLGVIFGPSLI-RPRPT 856

Query: 512 PDPVTM--LQDIKRQPKVVERLLSLPLEYWSQFMMVEQENIDPLHVIENS---NAFSTPQ 566
             P+T+  L +   Q ++VE L++   + +   +   Q+ +  + V++         +P+
Sbjct: 857 TAPITISSLAEYSNQARLVEFLITYSQKIFDGSLQ-PQDVMCSIGVVDQGCFPKPLLSPE 915

Query: 567 TPDIKVSLLGPVTTPEHQLLKTPSSSSLSQRVRS 600
             DI+ S+     + +  +  + S S + +R  S
Sbjct: 916 ERDIERSMKSLFFSSKEDIHTSESESKIFERATS 949


>gi|111154090 Rho GTPase activating protein 24 isoform 3 [Homo
           sapiens]
          Length = 653

 Score = 92.8 bits (229), Expect = 8e-19
 Identities = 82/282 (29%), Positives = 130/282 (46%), Gaps = 25/282 (8%)

Query: 361 MIPSIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKFLRVKTVPLLSKVDDIHAICS 420
           + P +V  CV+ I QRGL E GL+R+ G    VKEL++ F      P      D+H + S
Sbjct: 56  LAPMLVEQCVDFIRQRGLKEEGLFRLPGQANLVKELQDAF-DCGEKPSFDSNTDVHTVAS 114

Query: 421 LLKDFLRNLKEPLLTFRLNRAFMEAAEI--TDEDNSIAAMYQAVGELPQANRDTLAFLMI 478
           LLK +LR L EP++ +     F+  A++   +E+  +  + + V  LP  N + L ++  
Sbjct: 115 LLKLYLRELPEPVIPYAKYEDFLSCAKLLSKEEEAGVKELAKQVKSLPVVNYNLLKYICR 174

Query: 479 HLQRV-AQSPHTKMDVANLAKVFGPTIVAHAVPNPDPVTMLQDIKRQPKVVERLLSLPLE 537
            L  V + S   KM V NLA VFGP I+   V   DP+T+++       VV++L+S+ + 
Sbjct: 175 FLDEVQSYSGVNKMSVQNLATVFGPNILRPKV--EDPLTIMEG----TVVVQQLMSVMIS 228

Query: 538 YWSQFMMVEQE-NIDPLHVIENSNAFSTPQTPDIKVSLLGPVTTPEHQLLKTPSSSSLS- 595
                   + E    P   + N+N          K + +G +   E+   K   S   S 
Sbjct: 229 KHDCLFPKDAELQSKPQDGVSNNNEIQ-------KKATMGQLQNKENNNTKDSPSRQCSW 281

Query: 596 ----QRVRSTLTKNTPR--FGSKSKSATNLGRQGNFFASPML 631
                  RS++   +P    GSK+ S  N   + +   SP L
Sbjct: 282 DKSESPQRSSMNNGSPTALSGSKTNSPKNSVHKLDVSRSPPL 323


>gi|111154099 Rho GTPase activating protein 24 isoform 2 [Homo
           sapiens]
          Length = 655

 Score = 92.8 bits (229), Expect = 8e-19
 Identities = 82/282 (29%), Positives = 130/282 (46%), Gaps = 25/282 (8%)

Query: 361 MIPSIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKFLRVKTVPLLSKVDDIHAICS 420
           + P +V  CV+ I QRGL E GL+R+ G    VKEL++ F      P      D+H + S
Sbjct: 58  LAPMLVEQCVDFIRQRGLKEEGLFRLPGQANLVKELQDAF-DCGEKPSFDSNTDVHTVAS 116

Query: 421 LLKDFLRNLKEPLLTFRLNRAFMEAAEI--TDEDNSIAAMYQAVGELPQANRDTLAFLMI 478
           LLK +LR L EP++ +     F+  A++   +E+  +  + + V  LP  N + L ++  
Sbjct: 117 LLKLYLRELPEPVIPYAKYEDFLSCAKLLSKEEEAGVKELAKQVKSLPVVNYNLLKYICR 176

Query: 479 HLQRV-AQSPHTKMDVANLAKVFGPTIVAHAVPNPDPVTMLQDIKRQPKVVERLLSLPLE 537
            L  V + S   KM V NLA VFGP I+   V   DP+T+++       VV++L+S+ + 
Sbjct: 177 FLDEVQSYSGVNKMSVQNLATVFGPNILRPKV--EDPLTIMEG----TVVVQQLMSVMIS 230

Query: 538 YWSQFMMVEQE-NIDPLHVIENSNAFSTPQTPDIKVSLLGPVTTPEHQLLKTPSSSSLS- 595
                   + E    P   + N+N          K + +G +   E+   K   S   S 
Sbjct: 231 KHDCLFPKDAELQSKPQDGVSNNNEIQ-------KKATMGQLQNKENNNTKDSPSRQCSW 283

Query: 596 ----QRVRSTLTKNTPR--FGSKSKSATNLGRQGNFFASPML 631
                  RS++   +P    GSK+ S  N   + +   SP L
Sbjct: 284 DKSESPQRSSMNNGSPTALSGSKTNSPKNSVHKLDVSRSPPL 325


>gi|111154092 Rho GTPase activating protein 24 isoform 1 [Homo
           sapiens]
          Length = 748

 Score = 92.8 bits (229), Expect = 8e-19
 Identities = 82/282 (29%), Positives = 130/282 (46%), Gaps = 25/282 (8%)

Query: 361 MIPSIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKFLRVKTVPLLSKVDDIHAICS 420
           + P +V  CV+ I QRGL E GL+R+ G    VKEL++ F      P      D+H + S
Sbjct: 151 LAPMLVEQCVDFIRQRGLKEEGLFRLPGQANLVKELQDAF-DCGEKPSFDSNTDVHTVAS 209

Query: 421 LLKDFLRNLKEPLLTFRLNRAFMEAAEI--TDEDNSIAAMYQAVGELPQANRDTLAFLMI 478
           LLK +LR L EP++ +     F+  A++   +E+  +  + + V  LP  N + L ++  
Sbjct: 210 LLKLYLRELPEPVIPYAKYEDFLSCAKLLSKEEEAGVKELAKQVKSLPVVNYNLLKYICR 269

Query: 479 HLQRV-AQSPHTKMDVANLAKVFGPTIVAHAVPNPDPVTMLQDIKRQPKVVERLLSLPLE 537
            L  V + S   KM V NLA VFGP I+   V   DP+T+++       VV++L+S+ + 
Sbjct: 270 FLDEVQSYSGVNKMSVQNLATVFGPNILRPKV--EDPLTIMEG----TVVVQQLMSVMIS 323

Query: 538 YWSQFMMVEQE-NIDPLHVIENSNAFSTPQTPDIKVSLLGPVTTPEHQLLKTPSSSSLS- 595
                   + E    P   + N+N          K + +G +   E+   K   S   S 
Sbjct: 324 KHDCLFPKDAELQSKPQDGVSNNNEIQ-------KKATMGQLQNKENNNTKDSPSRQCSW 376

Query: 596 ----QRVRSTLTKNTPR--FGSKSKSATNLGRQGNFFASPML 631
                  RS++   +P    GSK+ S  N   + +   SP L
Sbjct: 377 DKSESPQRSSMNNGSPTALSGSKTNSPKNSVHKLDVSRSPPL 418


>gi|226693398 Rho GTPase activating protein 27 isoform b [Homo
           sapiens]
          Length = 521

 Score = 92.4 bits (228), Expect = 1e-18
 Identities = 63/184 (34%), Positives = 92/184 (50%), Gaps = 5/184 (2%)

Query: 351 LADFVSQTSPMIPSIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKFLRVKTVPLLS 410
           LA    +    +P  V  C+  +E RGL   GLYRISG   T+++L+ K    + + L  
Sbjct: 331 LAALCERERSRVPRFVQQCIRAVEARGLDIDGLYRISGNLATIQKLRYKVDHDERLDLDD 390

Query: 411 -KVDDIHAICSLLKDFLRNLKEPLLTFRLNRAFMEAAEITDEDNSIAAMYQAVGELPQAN 469
            + +D+H I   LK F R L EPL  F   R F+ A ++ D+      +   V  LP  N
Sbjct: 391 GRWEDVHVITGALKLFFRELPEPLFPFSHFRQFIAAIKLQDQARRSRCVRDLVRSLPAPN 450

Query: 470 RDTLAFLMIHLQRVAQ-SPHTKMDVANLAKVFGPTIVAHAVPNPDPVTMLQDIKRQPKVV 528
            DTL  L  HL RV +     +M V ++A VFGPT++    P  +  +M   +  Q +VV
Sbjct: 451 HDTLRMLFQHLCRVIEHGEQNRMSVQSVAIVFGPTLLR---PEVEETSMPMTMVFQNQVV 507

Query: 529 ERLL 532
           E +L
Sbjct: 508 ELIL 511


>gi|40548322 Rho GTPase activating protein 27 isoform a [Homo
           sapiens]
          Length = 548

 Score = 92.4 bits (228), Expect = 1e-18
 Identities = 63/184 (34%), Positives = 92/184 (50%), Gaps = 5/184 (2%)

Query: 351 LADFVSQTSPMIPSIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKFLRVKTVPLLS 410
           LA    +    +P  V  C+  +E RGL   GLYRISG   T+++L+ K    + + L  
Sbjct: 358 LAALCERERSRVPRFVQQCIRAVEARGLDIDGLYRISGNLATIQKLRYKVDHDERLDLDD 417

Query: 411 -KVDDIHAICSLLKDFLRNLKEPLLTFRLNRAFMEAAEITDEDNSIAAMYQAVGELPQAN 469
            + +D+H I   LK F R L EPL  F   R F+ A ++ D+      +   V  LP  N
Sbjct: 418 GRWEDVHVITGALKLFFRELPEPLFPFSHFRQFIAAIKLQDQARRSRCVRDLVRSLPAPN 477

Query: 470 RDTLAFLMIHLQRVAQ-SPHTKMDVANLAKVFGPTIVAHAVPNPDPVTMLQDIKRQPKVV 528
            DTL  L  HL RV +     +M V ++A VFGPT++    P  +  +M   +  Q +VV
Sbjct: 478 HDTLRMLFQHLCRVIEHGEQNRMSVQSVAIVFGPTLLR---PEVEETSMPMTMVFQNQVV 534

Query: 529 ERLL 532
           E +L
Sbjct: 535 ELIL 538


>gi|4505507 oligophrenin 1 [Homo sapiens]
          Length = 802

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 60/168 (35%), Positives = 92/168 (54%), Gaps = 7/168 (4%)

Query: 369 CVNEIEQRGLTETGLYRISGCDRTVKELKEKFLRVKT---VPLLSKVDDIHAICSLLKDF 425
           C+N IE +G+   GLYR  G +  V++L   F   K    V   +   DI  I S LK +
Sbjct: 393 CINIIETKGIKTEGLYRTVGSNIQVQKLLNAFFDPKCPGDVDFHNSDWDIKTITSSLKFY 452

Query: 426 LRNLKEPLLTFRLNRAFMEAAEITDEDNSIAAMYQAVGELPQANRDTLAFLMIHLQRVAQ 485
           LRNL EP++T+RL++  + AA+  + D  + A++  V +LP+ NR+ L  L+ HL  V +
Sbjct: 453 LRNLSEPVMTYRLHKELVSAAKSDNLDYRLGAIHSLVYKLPEKNREMLELLIRHLVNVCE 512

Query: 486 -SPHTKMDVANLAKVFGPTIVAHAVPNPDPVTMLQDIKRQPKVVERLL 532
            S    M  +N+  +FGPT++       D V  + +IK Q  VVE L+
Sbjct: 513 HSKENLMTPSNMGVIFGPTLMR---AQEDTVAAMMNIKFQNIVVEILI 557


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.132    0.378 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,443,819
Number of Sequences: 37866
Number of extensions: 1087896
Number of successful extensions: 5071
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 137
Number of HSP's successfully gapped in prelim test: 170
Number of HSP's that attempted gapping in prelim test: 4503
Number of HSP's gapped (non-prelim): 577
length of query: 632
length of database: 18,247,518
effective HSP length: 108
effective length of query: 524
effective length of database: 14,157,990
effective search space: 7418786760
effective search space used: 7418786760
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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