Guide to the Human Genome
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Search of human proteins with 21361380

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|21361380 EAP30 subunit of ELL complex [Homo sapiens]
         (258 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|21361380 EAP30 subunit of ELL complex [Homo sapiens]               514   e-146
gi|157671945 hypothetical protein LOC79974 isoform 1 [Homo sapiens]    35   0.065
gi|71051598 vacuolar protein sorting 36 [Homo sapiens]                 32   0.42 
gi|19923345 RNA binding motif protein 12 [Homo sapiens]                32   0.55 
gi|23510462 RNA binding motif protein 12 [Homo sapiens]                32   0.55 
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]     32   0.72 
gi|93102364 SWAP-70 protein [Homo sapiens]                             32   0.72 
gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens]           31   1.2  
gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens]           31   1.2  
gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens]           31   1.2  
gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo s...    30   2.7  
gi|41872583 Rho-associated, coiled-coil containing protein kinas...    29   3.6  
gi|4503327 cytochrome b5 reductase 3 isoform m [Homo sapiens]          29   3.6  
gi|193794826 cytochrome b5 reductase 3 isoform s [Homo sapiens]        29   3.6  
gi|6552328 cytochrome b5 reductase 3 isoform s [Homo sapiens]          29   3.6  
gi|45446749 kinesin family member 5A [Homo sapiens]                    29   3.6  
gi|226371725 FCH domain only 2 isoform b [Homo sapiens]                29   4.6  
gi|226371723 FCH domain only 2 isoform a [Homo sapiens]                29   4.6  
gi|45439370 TAO kinase 1 [Homo sapiens]                                28   6.1  
gi|150010552 FK506 binding protein 15, 133kDa [Homo sapiens]           28   6.1  
gi|44890052 stathmin 1 isoform a [Homo sapiens]                        28   7.9  
gi|44890050 stathmin 1 isoform a [Homo sapiens]                        28   7.9  
gi|5031851 stathmin 1 isoform a [Homo sapiens]                         28   7.9  
gi|4758648 kinesin family member 5B [Homo sapiens]                     28   7.9  

>gi|21361380 EAP30 subunit of ELL complex [Homo sapiens]
          Length = 258

 Score =  514 bits (1323), Expect = e-146
 Identities = 258/258 (100%), Positives = 258/258 (100%)

Query: 1   MHRRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRK 60
           MHRRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRK
Sbjct: 1   MHRRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRK 60

Query: 61  NPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLIT 120
           NPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLIT
Sbjct: 61  NPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLIT 120

Query: 121 LEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDH 180
           LEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDH
Sbjct: 121 LEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDH 180

Query: 181 TVVLQLAEKNGYVTVSEIKASLKWETERARQVLEHLLKEGLAWLDLQAPGEAHYWLPALF 240
           TVVLQLAEKNGYVTVSEIKASLKWETERARQVLEHLLKEGLAWLDLQAPGEAHYWLPALF
Sbjct: 181 TVVLQLAEKNGYVTVSEIKASLKWETERARQVLEHLLKEGLAWLDLQAPGEAHYWLPALF 240

Query: 241 TDLYSQEITAEEAREALP 258
           TDLYSQEITAEEAREALP
Sbjct: 241 TDLYSQEITAEEAREALP 258


>gi|157671945 hypothetical protein LOC79974 isoform 1 [Homo sapiens]
          Length = 1026

 Score = 35.0 bits (79), Expect = 0.065
 Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 6/80 (7%)

Query: 116 GGLITLEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAE 175
           GG+  L   H Q++       + + +++L+  +  +K LG GF +   G  +L QS    
Sbjct: 859 GGVQWLNSNHLQIIH------KVLKRENLLNILVIIKTLGIGFHLPVDGVHFLTQSEVQN 912

Query: 176 LNMDHTVVLQLAEKNGYVTV 195
           L  ++ ++L  A+K+GY  V
Sbjct: 913 LWKENLIILDTAKKHGYEVV 932


>gi|71051598 vacuolar protein sorting 36 [Homo sapiens]
          Length = 386

 Score = 32.3 bits (72), Expect = 0.42
 Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 13/155 (8%)

Query: 4   RGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQ-MSKQLDMFKTNLEEFASKHKQEIRKNP 62
           R VG   I +K   + K  ++    A + L++ M K  +M + + +  A+K K +     
Sbjct: 152 RAVGIVGIERKLEEKRKETDKNISEAFEDLSKLMIKAKEMVELS-KSIANKIKDKQGDIT 210

Query: 63  EFR-VQFQDMCATIGV-DPLASGKGFWSEMLGVGDFYY-ELGVQIIEVCLALKHRNGGLI 119
           E   ++F+    ++G+ +P+        E  G G  Y+ +L  Q+  +        GG++
Sbjct: 211 EDETIRFKSYLLSMGIANPVTR------ETYGSGTQYHMQLAKQLAGILQVPLEERGGIM 264

Query: 120 TLEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKAL 154
           +L E++  V + RG   + +S +DL+ A K L+AL
Sbjct: 265 SLTEVYCLVNRARG--MELLSPEDLVNACKMLEAL 297


>gi|19923345 RNA binding motif protein 12 [Homo sapiens]
          Length = 932

 Score = 32.0 bits (71), Expect = 0.55
 Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 20/151 (13%)

Query: 36  MSKQLDMFKTNLEEFASKHKQEIRKNPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGD 95
           M +++DM +  L+ F S  ++E+  NPE  V    +CA I   P +  K      + V  
Sbjct: 510 MLEKIDMIRKRLQNF-SYDQREMILNPEGDVNSAKVCAHITNIPFSITK------MDVLQ 562

Query: 96  FYYELGVQIIEVCLALKHRNGGLITL-------------EELHQQVLKGRGKFAQDVSQD 142
           F   + V    V + + +   GL                E LH++ L GR  F   V+ +
Sbjct: 563 FLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTLE 622

Query: 143 DLIRAIKKLKALGTGFGIIPVGGTYLIQSVP 173
           D+    K   A G     +PV G   +  +P
Sbjct: 623 DMREIEKNPPAQGKKGLKMPVPGNPAVPGMP 653


>gi|23510462 RNA binding motif protein 12 [Homo sapiens]
          Length = 932

 Score = 32.0 bits (71), Expect = 0.55
 Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 20/151 (13%)

Query: 36  MSKQLDMFKTNLEEFASKHKQEIRKNPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGD 95
           M +++DM +  L+ F S  ++E+  NPE  V    +CA I   P +  K      + V  
Sbjct: 510 MLEKIDMIRKRLQNF-SYDQREMILNPEGDVNSAKVCAHITNIPFSITK------MDVLQ 562

Query: 96  FYYELGVQIIEVCLALKHRNGGLITL-------------EELHQQVLKGRGKFAQDVSQD 142
           F   + V    V + + +   GL                E LH++ L GR  F   V+ +
Sbjct: 563 FLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTLE 622

Query: 143 DLIRAIKKLKALGTGFGIIPVGGTYLIQSVP 173
           D+    K   A G     +PV G   +  +P
Sbjct: 623 DMREIEKNPPAQGKKGLKMPVPGNPAVPGMP 653


>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
          Length = 1960

 Score = 31.6 bits (70), Expect = 0.72
 Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 16/87 (18%)

Query: 5    GVGAGAIAKKKLAEAKY--------KERG-TVLAEDQLAQMSKQLDMFKTNL-------E 48
            G GA A+ +K+  EA+         +E+G T L  D+L + + Q+D   T+L       +
Sbjct: 1715 GKGALALEEKRRLEARIAQLEEELEEEQGNTELINDRLKKANLQIDQINTDLNLERSHAQ 1774

Query: 49   EFASKHKQEIRKNPEFRVQFQDMCATI 75
            +  +  +Q  R+N E +V+ Q+M  T+
Sbjct: 1775 KNENARQQLERQNKELKVKLQEMEGTV 1801


>gi|93102364 SWAP-70 protein [Homo sapiens]
          Length = 585

 Score = 31.6 bits (70), Expect = 0.72
 Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 4/66 (6%)

Query: 11  IAKKKLAEAKYKERGTVLAEDQLAQMSKQ--LDMFKTNLEEFASKHKQEIRKNPEFRVQF 68
           + KK+LAE +  ER   + E Q A  SKQ  L+  +  LEE AS+  +E +K  + +V+ 
Sbjct: 326 LRKKQLAEQEELERQ--MKELQAANESKQQELEAVRKKLEEAASRAAEEEKKRLQTQVEL 383

Query: 69  QDMCAT 74
           Q   +T
Sbjct: 384 QARFST 389


>gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens]
          Length = 2003

 Score = 30.8 bits (68), Expect = 1.2
 Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 2/50 (4%)

Query: 13   KKKLAEAKYK--ERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRK 60
            +K   EAK K  E   +L EDQ +++SK+  + +  L EF+S+  +E  K
Sbjct: 997  EKVTTEAKMKKFEEDLLLLEDQNSKLSKERKLLEDRLAEFSSQAAEEEEK 1046


>gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens]
          Length = 1995

 Score = 30.8 bits (68), Expect = 1.2
 Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 2/50 (4%)

Query: 13   KKKLAEAKYK--ERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRK 60
            +K   EAK K  E   +L EDQ +++SK+  + +  L EF+S+  +E  K
Sbjct: 989  EKVTTEAKMKKFEEDLLLLEDQNSKLSKERKLLEDRLAEFSSQAAEEEEK 1038


>gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens]
          Length = 2036

 Score = 30.8 bits (68), Expect = 1.2
 Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 2/50 (4%)

Query: 13   KKKLAEAKYK--ERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRK 60
            +K   EAK K  E   +L EDQ +++SK+  + +  L EF+S+  +E  K
Sbjct: 1030 EKVTTEAKMKKFEEDLLLLEDQNSKLSKERKLLEDRLAEFSSQAAEEEEK 1079


>gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo
            sapiens]
          Length = 4911

 Score = 29.6 bits (65), Expect = 2.7
 Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 5/73 (6%)

Query: 6    VGAGAIAKKKLA--EAKYKERGTVLAED---QLAQMSKQLDMFKTNLEEFASKHKQEIRK 60
            +GA   +KK L+  +   K+ G    E+   QL  +++Q  M +  LE+   + K+    
Sbjct: 3202 IGAHRKSKKALSAKQRTAKKAGREFPEEDAEQLKHVTEQQSMVQKQLEQIRKQQKEHAEL 3261

Query: 61   NPEFRVQFQDMCA 73
              ++R++ Q  CA
Sbjct: 3262 IEDYRIKQQQQCA 3274


>gi|41872583 Rho-associated, coiled-coil containing protein kinase 2
           [Homo sapiens]
          Length = 1388

 Score = 29.3 bits (64), Expect = 3.6
 Identities = 14/63 (22%), Positives = 32/63 (50%)

Query: 16  LAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNPEFRVQFQDMCATI 75
           L +A  ++    +AE+Q + + K+  M +  ++E  ++HKQE+ +        ++   T+
Sbjct: 919 LTKADSEQLARSIAEEQYSDLEKEKIMKELEIKEMMARHKQELTEKDATIASLEETNRTL 978

Query: 76  GVD 78
             D
Sbjct: 979 TSD 981


>gi|4503327 cytochrome b5 reductase 3 isoform m [Homo sapiens]
          Length = 301

 Score = 29.3 bits (64), Expect = 3.6
 Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 5/57 (8%)

Query: 128 VLKGRGKFA--QDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDHTV 182
           V +G+GKFA   D   + +IR +K +  +  G GI P+    +I+++  + + DHTV
Sbjct: 150 VYQGKGKFAIRPDKKSNPIIRTVKSVGMIAGGTGITPM--LQVIRAIMKDPD-DHTV 203


>gi|193794826 cytochrome b5 reductase 3 isoform s [Homo sapiens]
          Length = 278

 Score = 29.3 bits (64), Expect = 3.6
 Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 5/57 (8%)

Query: 128 VLKGRGKFA--QDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDHTV 182
           V +G+GKFA   D   + +IR +K +  +  G GI P+    +I+++  + + DHTV
Sbjct: 127 VYQGKGKFAIRPDKKSNPIIRTVKSVGMIAGGTGITPM--LQVIRAIMKDPD-DHTV 180


>gi|6552328 cytochrome b5 reductase 3 isoform s [Homo sapiens]
          Length = 278

 Score = 29.3 bits (64), Expect = 3.6
 Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 5/57 (8%)

Query: 128 VLKGRGKFA--QDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDHTV 182
           V +G+GKFA   D   + +IR +K +  +  G GI P+    +I+++  + + DHTV
Sbjct: 127 VYQGKGKFAIRPDKKSNPIIRTVKSVGMIAGGTGITPM--LQVIRAIMKDPD-DHTV 180


>gi|45446749 kinesin family member 5A [Homo sapiens]
          Length = 1032

 Score = 29.3 bits (64), Expect = 3.6
 Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 6/54 (11%)

Query: 14  KKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNPEFRVQ 67
           KK AE + ++ G + ++ Q      ++   + NLE+    HKQ +R N + R +
Sbjct: 810 KKSAEMEPEDSGGIHSQKQ------KISFLENNLEQLTKVHKQLVRDNADLRCE 857


>gi|226371725 FCH domain only 2 isoform b [Homo sapiens]
          Length = 777

 Score = 28.9 bits (63), Expect = 4.6
 Identities = 40/162 (24%), Positives = 65/162 (40%), Gaps = 27/162 (16%)

Query: 9   GAIAKKKLA---------EAKYKERGTVLAED-----QLAQMSKQLDMFKTNLEEFASKH 54
           G I+ K+LA         E  Y    T LA+      QL   +   D+FKT+ E+ A+ H
Sbjct: 28  GQISTKELADFVRERATIEEAYSRSMTKLAKSASNYSQLGTFAPVWDVFKTSTEKLANCH 87

Query: 55  KQEIRKNPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHR 114
              +RK  E   + Q      G + + S K    E+ G  +      VQ I+       +
Sbjct: 88  LDLVRKLQELIKEVQ----KYGEEQVKSHKKTKEEVAGTLE-----AVQTIQSITQALQK 138

Query: 115 NGGLITLEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGT 156
           +      + + Q+ LK  G   +++ +     A+K  KA  T
Sbjct: 139 SKENYNAKCVEQERLKKEGATQREIEK----AAVKSKKATDT 176


>gi|226371723 FCH domain only 2 isoform a [Homo sapiens]
          Length = 810

 Score = 28.9 bits (63), Expect = 4.6
 Identities = 40/162 (24%), Positives = 65/162 (40%), Gaps = 27/162 (16%)

Query: 9   GAIAKKKLA---------EAKYKERGTVLAED-----QLAQMSKQLDMFKTNLEEFASKH 54
           G I+ K+LA         E  Y    T LA+      QL   +   D+FKT+ E+ A+ H
Sbjct: 28  GQISTKELADFVRERATIEEAYSRSMTKLAKSASNYSQLGTFAPVWDVFKTSTEKLANCH 87

Query: 55  KQEIRKNPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHR 114
              +RK  E   + Q      G + + S K    E+ G  +      VQ I+       +
Sbjct: 88  LDLVRKLQELIKEVQ----KYGEEQVKSHKKTKEEVAGTLE-----AVQTIQSITQALQK 138

Query: 115 NGGLITLEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGT 156
           +      + + Q+ LK  G   +++ +     A+K  KA  T
Sbjct: 139 SKENYNAKCVEQERLKKEGATQREIEK----AAVKSKKATDT 176


>gi|45439370 TAO kinase 1 [Homo sapiens]
          Length = 1001

 Score = 28.5 bits (62), Expect = 6.1
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 8/59 (13%)

Query: 22  KERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNP--------EFRVQFQDMC 72
           K R  ++      +++ QL+  K    E   KH  E+R+ P        + + QFQD C
Sbjct: 672 KMRCELIRLQHQTELTNQLEYNKRRERELRRKHVMEVRQQPKSLKSKELQIKKQFQDTC 730


>gi|150010552 FK506 binding protein 15, 133kDa [Homo sapiens]
          Length = 1219

 Score = 28.5 bits (62), Expect = 6.1
 Identities = 32/138 (23%), Positives = 59/138 (42%), Gaps = 25/138 (18%)

Query: 13  KKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKN----------- 61
           +K+  E    ER    A+++ +Q  +++D  + + +E   K +Q ++K            
Sbjct: 735 EKESLEKNLSERKKKSAQER-SQAEEEIDEIRKSYQEELDKLRQLLKKTRVSTDQAAAEQ 793

Query: 62  -----PEFRVQFQDMCATIGVDPLASGKGF----WSEMLGVGDFYYELGVQIIEVCLALK 112
                 E + Q++  C  +    LAS K      + E+    D Y +  VQ+ E CLAL+
Sbjct: 794 LSLVQAELQTQWEAKCEHL----LASAKDEHLQQYQEVCAQRDAYQQKLVQLQEKCLALQ 849

Query: 113 HRNGGLITLEELHQQVLK 130
            +   L    E H + L+
Sbjct: 850 AQITALTKQNEQHIKELE 867


>gi|44890052 stathmin 1 isoform a [Homo sapiens]
          Length = 149

 Score = 28.1 bits (61), Expect = 7.9
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 5/49 (10%)

Query: 15  KLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNPE 63
           K+AE K   +     E++ AQM+ +L+  +        KH +E+RKN E
Sbjct: 95  KMAEEKLTHKMEANKENREAQMAAKLERLREK-----DKHIEEVRKNKE 138


>gi|44890050 stathmin 1 isoform a [Homo sapiens]
          Length = 149

 Score = 28.1 bits (61), Expect = 7.9
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 5/49 (10%)

Query: 15  KLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNPE 63
           K+AE K   +     E++ AQM+ +L+  +        KH +E+RKN E
Sbjct: 95  KMAEEKLTHKMEANKENREAQMAAKLERLREK-----DKHIEEVRKNKE 138


>gi|5031851 stathmin 1 isoform a [Homo sapiens]
          Length = 149

 Score = 28.1 bits (61), Expect = 7.9
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 5/49 (10%)

Query: 15  KLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNPE 63
           K+AE K   +     E++ AQM+ +L+  +        KH +E+RKN E
Sbjct: 95  KMAEEKLTHKMEANKENREAQMAAKLERLREK-----DKHIEEVRKNKE 138


>gi|4758648 kinesin family member 5B [Homo sapiens]
          Length = 963

 Score = 28.1 bits (61), Expect = 7.9
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 6/54 (11%)

Query: 14  KKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNPEFRVQ 67
           KK AE    + G   A+ Q      ++   + NLE+    HKQ +R N + R +
Sbjct: 812 KKSAEIDSDDTGGSAAQKQ------KISFLENNLEQLTKVHKQLVRDNADLRCE 859


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.135    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,185,737
Number of Sequences: 37866
Number of extensions: 384882
Number of successful extensions: 1204
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1193
Number of HSP's gapped (non-prelim): 27
length of query: 258
length of database: 18,247,518
effective HSP length: 100
effective length of query: 158
effective length of database: 14,460,918
effective search space: 2284825044
effective search space used: 2284825044
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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