SNF8 12952

Name: SNF8	Sequence: fasta or formatted (258aa)		NCBI GI: 21361380
Description: EAP30 subunit of ELL complex		Referenced in: ER, Golgi, and the Secretory Pathway
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.7 25 1 C cysteine 0.8 2 1 D aspartate 4.3 11 2 E glutamate 9.3 24 2 F phenylalanine 3.5 9 1 G glycine 8.5 22 2 H histidine 2.7 7 1 I isoleucine 5.0 13 2 K lysine 8.1 21 3 L leucine 12.4 32 2 M methionine 2.3 6 1 N asparagine 1.9 5 1 P proline 2.7 7 1 Q glutamine 6.2 16 2 R arginine 4.3 11 2 S serine 3.5 9 1 T threonine 4.3 11 1 V valine 6.2 16 2 W tryptophan 1.6 4 1 Y tyrosine 2.7 7 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 EAP30 subunit of ELL complex C7orf58 0.020 hypothetical protein LOC79974 isoform 1 VPS36 0.014 vacuolar protein sorting 36 RBM12 0.014 RNA binding motif protein 12 RBM12 0.014 RNA binding motif protein 12 MYH9 0.014 myosin, heavy polypeptide 9, non-muscle SWAP70 0.014 SWAP-70 protein MYH14 0.012 myosin, heavy chain 14 isoform 1 MYH14 0.012 myosin, heavy chain 14 isoform 2 MYH14 0.012 myosin, heavy chain 14 isoform 3 MLL3 0.010 myeloid/lymphoid or mixed-lineage leukemia 3 ROCK2 0.008 Rho-associated, coiled-coil containing protein kinas... CYB5R3 0.008 cytochrome b5 reductase 3 isoform m CYB5R3 0.008 cytochrome b5 reductase 3 isoform s CYB5R3 0.008 cytochrome b5 reductase 3 isoform s KIF5A 0.008 kinesin family member 5A FCHO2 0.008 FCH domain only 2 isoform b FCHO2 0.008 FCH domain only 2 isoform a TAOK1 0.006 TAO kinase 1 FKBP15 0.006 FK506 binding protein 15, 133kDa STMN1 0.006 stathmin 1 isoform a STMN1 0.006 stathmin 1 isoform a STMN1 0.006 stathmin 1 isoform a KIF5B 0.006 kinesin family member 5B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.