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Search of human proteins with 21359945
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21359945 chromosome condensation protein G [Homo sapiens]
(1015 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21359945 chromosome condensation protein G [Homo sapiens] 1960 0.0
gi|239750788 PREDICTED: similar to hCG2040392 [Homo sapiens] 301 2e-81
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 39 0.025
gi|20149594 heat shock 90kDa protein 1, beta [Homo sapiens] 36 0.16
gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo ... 36 0.21
gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo ... 36 0.21
gi|109638749 signal recognition particle 72kDa [Homo sapiens] 35 0.36
gi|239741673 PREDICTED: protein immuno-reactive with anti-PTH po... 35 0.47
gi|60498978 elastin microfibril interfacer 2 [Homo sapiens] 35 0.47
gi|223555935 dynein, axonemal, heavy polypeptide 14 isoform 1 [H... 34 0.61
gi|62243374 MAD1-like 1 protein [Homo sapiens] 34 0.61
gi|62243369 MAD1-like 1 protein [Homo sapiens] 34 0.61
gi|62243332 MAD1-like 1 protein [Homo sapiens] 34 0.61
gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens] 34 0.80
gi|41055989 M-phase phosphoprotein 8 [Homo sapiens] 33 1.0
gi|5453886 serpin peptidase inhibitor, clade I (pancpin), member... 33 1.0
gi|13994289 fibronectin type III and SPRY domain containing 1-li... 33 1.4
gi|187761324 shootin1 isoform a [Homo sapiens] 33 1.4
gi|50511340 shootin1 isoform b [Homo sapiens] 33 1.4
gi|81295809 pericentrin [Homo sapiens] 33 1.8
gi|124517695 ankyrin repeat domain 36B [Homo sapiens] 33 1.8
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens] 32 2.3
gi|5729796 cytochrome P450, family 46 [Homo sapiens] 32 2.3
gi|224451077 HBV PreS1-transactivated protein 3 isoform b [Homo ... 32 3.0
gi|93102389 HBV PreS1-transactivated protein 3 isoform a [Homo s... 32 3.0
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 32 3.0
gi|190341068 forkhead-associated (FHA) phosphopeptide binding do... 32 3.0
gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo sa... 32 4.0
gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo s... 32 4.0
gi|40538794 coiled-coil domain containing 21 [Homo sapiens] 32 4.0
>gi|21359945 chromosome condensation protein G [Homo sapiens]
Length = 1015
Score = 1960 bits (5078), Expect = 0.0
Identities = 1015/1015 (100%), Positives = 1015/1015 (100%)
Query: 1 MGAERRLLSIKEAFRLAQQPHQNQAKLVVALSRTYRTMDDKTVFHEEFIHYLKYVMVVYK 60
MGAERRLLSIKEAFRLAQQPHQNQAKLVVALSRTYRTMDDKTVFHEEFIHYLKYVMVVYK
Sbjct: 1 MGAERRLLSIKEAFRLAQQPHQNQAKLVVALSRTYRTMDDKTVFHEEFIHYLKYVMVVYK 60
Query: 61 REPAVERVIEFAAKFVTSFHQSDMEDDEEEEDGGLLNYLFTFLLKSHEANSNAVRFRVCL 120
REPAVERVIEFAAKFVTSFHQSDMEDDEEEEDGGLLNYLFTFLLKSHEANSNAVRFRVCL
Sbjct: 61 REPAVERVIEFAAKFVTSFHQSDMEDDEEEEDGGLLNYLFTFLLKSHEANSNAVRFRVCL 120
Query: 121 LINKLLGSMPENAQIDDDVFDKINKAMLIRLKDKIPNVRIQAVLALSRLQDPKDDECPVV 180
LINKLLGSMPENAQIDDDVFDKINKAMLIRLKDKIPNVRIQAVLALSRLQDPKDDECPVV
Sbjct: 121 LINKLLGSMPENAQIDDDVFDKINKAMLIRLKDKIPNVRIQAVLALSRLQDPKDDECPVV 180
Query: 181 NAYATLIENDSNPEVRRAVLSCIAPSAKTLPKIVGRTKDVKEAVRKLAYQVLAEKVHMRA 240
NAYATLIENDSNPEVRRAVLSCIAPSAKTLPKIVGRTKDVKEAVRKLAYQVLAEKVHMRA
Sbjct: 181 NAYATLIENDSNPEVRRAVLSCIAPSAKTLPKIVGRTKDVKEAVRKLAYQVLAEKVHMRA 240
Query: 241 MSIAQRVMLLQQGLNDRSDAVKQAMQKHLLQGWLRFSEGNILELLHRLDVENSSEVAVSV 300
MSIAQRVMLLQQGLNDRSDAVKQAMQKHLLQGWLRFSEGNILELLHRLDVENSSEVAVSV
Sbjct: 241 MSIAQRVMLLQQGLNDRSDAVKQAMQKHLLQGWLRFSEGNILELLHRLDVENSSEVAVSV 300
Query: 301 LNALFSITPLSELVGLCKNNDGRKLIPVETLTPEIALYWCALCEYLKSKGDEGEEFLEQI 360
LNALFSITPLSELVGLCKNNDGRKLIPVETLTPEIALYWCALCEYLKSKGDEGEEFLEQI
Sbjct: 301 LNALFSITPLSELVGLCKNNDGRKLIPVETLTPEIALYWCALCEYLKSKGDEGEEFLEQI 360
Query: 361 LPEPVVYADYLLSYIQSIPVVNEEHRGDFSYIGNLMTKEFIGQQLILIIKSLDTSEEGGR 420
LPEPVVYADYLLSYIQSIPVVNEEHRGDFSYIGNLMTKEFIGQQLILIIKSLDTSEEGGR
Sbjct: 361 LPEPVVYADYLLSYIQSIPVVNEEHRGDFSYIGNLMTKEFIGQQLILIIKSLDTSEEGGR 420
Query: 421 KKLLAVLQEILILPTIPISLVSFLVERLLHIIIDDNKRTQIVTEIISEIRAPIVTVGVNN 480
KKLLAVLQEILILPTIPISLVSFLVERLLHIIIDDNKRTQIVTEIISEIRAPIVTVGVNN
Sbjct: 421 KKLLAVLQEILILPTIPISLVSFLVERLLHIIIDDNKRTQIVTEIISEIRAPIVTVGVNN 480
Query: 481 DPADVRKKELKMAEIKVKLIEAKEALENCITLQDFNRASELKEEIKALEDARINLLKETE 540
DPADVRKKELKMAEIKVKLIEAKEALENCITLQDFNRASELKEEIKALEDARINLLKETE
Sbjct: 481 DPADVRKKELKMAEIKVKLIEAKEALENCITLQDFNRASELKEEIKALEDARINLLKETE 540
Query: 541 QLEIKEVHIEKNDAETLQKCLILCYELLKQMSISTGLSATMNGIIESLILPGIISIHPVV 600
QLEIKEVHIEKNDAETLQKCLILCYELLKQMSISTGLSATMNGIIESLILPGIISIHPVV
Sbjct: 541 QLEIKEVHIEKNDAETLQKCLILCYELLKQMSISTGLSATMNGIIESLILPGIISIHPVV 600
Query: 601 RNLAVLCLGCCGLQNQDFARKHFVLLLQVLQIDDVTIKISALKAIFDQLMTFGIEPFKTK 660
RNLAVLCLGCCGLQNQDFARKHFVLLLQVLQIDDVTIKISALKAIFDQLMTFGIEPFKTK
Sbjct: 601 RNLAVLCLGCCGLQNQDFARKHFVLLLQVLQIDDVTIKISALKAIFDQLMTFGIEPFKTK 660
Query: 661 KIKTLHCEGTEINSDDEQESKEVEETATAKNVLKLLSDFLDSEVSELRTGAAEGLAKLMF 720
KIKTLHCEGTEINSDDEQESKEVEETATAKNVLKLLSDFLDSEVSELRTGAAEGLAKLMF
Sbjct: 661 KIKTLHCEGTEINSDDEQESKEVEETATAKNVLKLLSDFLDSEVSELRTGAAEGLAKLMF 720
Query: 721 SGLLVSSRILSRLILLWYNPVTEEDVQLRHCLGVFFPVFAYASRTNQECFEEAFLPTLQT 780
SGLLVSSRILSRLILLWYNPVTEEDVQLRHCLGVFFPVFAYASRTNQECFEEAFLPTLQT
Sbjct: 721 SGLLVSSRILSRLILLWYNPVTEEDVQLRHCLGVFFPVFAYASRTNQECFEEAFLPTLQT 780
Query: 781 LANAPASSPLAEIDITNVAELLVDLTRPSGLNPQAKTSQDYQALTVHDNLAMKICNEILT 840
LANAPASSPLAEIDITNVAELLVDLTRPSGLNPQAKTSQDYQALTVHDNLAMKICNEILT
Sbjct: 781 LANAPASSPLAEIDITNVAELLVDLTRPSGLNPQAKTSQDYQALTVHDNLAMKICNEILT 840
Query: 841 SPCSPEIRVYTKALSSLELSSHLAKDLLVLLNEILEQVKDRTCLRALEKIKIQLEKGNKE 900
SPCSPEIRVYTKALSSLELSSHLAKDLLVLLNEILEQVKDRTCLRALEKIKIQLEKGNKE
Sbjct: 841 SPCSPEIRVYTKALSSLELSSHLAKDLLVLLNEILEQVKDRTCLRALEKIKIQLEKGNKE 900
Query: 901 FGDQAEAAQDATLTTTTFQNEDEKNKEVYMTPLRGVKATQASKSTQLKTNRGQRKVTVSA 960
FGDQAEAAQDATLTTTTFQNEDEKNKEVYMTPLRGVKATQASKSTQLKTNRGQRKVTVSA
Sbjct: 901 FGDQAEAAQDATLTTTTFQNEDEKNKEVYMTPLRGVKATQASKSTQLKTNRGQRKVTVSA 960
Query: 961 RTNRRCQTAEADSESDHEVPEPESEMKMRLPRRAKTAALEKSKLNLAQFLNEDLS 1015
RTNRRCQTAEADSESDHEVPEPESEMKMRLPRRAKTAALEKSKLNLAQFLNEDLS
Sbjct: 961 RTNRRCQTAEADSESDHEVPEPESEMKMRLPRRAKTAALEKSKLNLAQFLNEDLS 1015
>gi|239750788 PREDICTED: similar to hCG2040392 [Homo sapiens]
Length = 185
Score = 301 bits (771), Expect = 2e-81
Identities = 157/183 (85%), Positives = 165/183 (90%), Gaps = 1/183 (0%)
Query: 190 DSNPEVRRAVLSCIAPSAKTLPKIVGRTKDVKEAVRKLAYQVLAEKVHMRAMSIAQRVML 249
D NPE+R+AVLSCIAPSAKTLPKIVG TKDVKEAVRKLAY VLAEKV MRAMSIAQ VML
Sbjct: 3 DLNPELRQAVLSCIAPSAKTLPKIVGCTKDVKEAVRKLAYPVLAEKVRMRAMSIAQTVML 62
Query: 250 LQQGLNDRSDAVKQAMQKHLLQGWLRFSEGNILELLHRLDVENSSEVAVSVLNALFSITP 309
QQG N+RSDAVKQAM KHLLQ WL FSEGNI E L +LDVEN SEVAVSVLNA+FS+TP
Sbjct: 63 PQQGFNERSDAVKQAMWKHLLQSWLWFSEGNIFEWLQQLDVEN-SEVAVSVLNAMFSMTP 121
Query: 310 LSELVGLCKNNDGRKLIPVETLTPEIALYWCALCEYLKSKGDEGEEFLEQILPEPVVYAD 369
LSELV +CKNNDGRKLI VETLTPEIALYWCALCEYLKSKGDEGEEFLE+I PEPVVY D
Sbjct: 122 LSELVAICKNNDGRKLILVETLTPEIALYWCALCEYLKSKGDEGEEFLERISPEPVVYID 181
Query: 370 YLL 372
YLL
Sbjct: 182 YLL 184
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 38.9 bits (89), Expect = 0.025
Identities = 63/239 (26%), Positives = 96/239 (40%), Gaps = 37/239 (15%)
Query: 776 PTLQTLANAPASSPLAEIDITNVAELLVDLTRPSGLNPQAKTSQDYQALTVHDNLAMKIC 835
P QT P+S L ++ + +L P GL P+A+ +C
Sbjct: 2514 PPAQTCLVTPSSPLLLGPPSVPISASVTNL--PLGLRPEAE-----------------LC 2554
Query: 836 NEILTSPCSPEIR-VYTKALSSLELSSHLAKDLLVLLNEILEQVKDRTCLRALEKIKIQL 894
+ L SP S E+ V + SSL L KDLL + EIL V ++ + L
Sbjct: 2555 AQALASPESLELASVASSETSSLSLVP--PKDLLPVAVEILP-VSEKNLSLTPSAPSLTL 2611
Query: 895 EKGNKEFGDQAEAAQDATLTTTTFQNEDEKNKEVYMTPLRGVKATQASKSTQ-----LKT 949
E G+ G + EA A TT T E E+ + ++ G++ ++ S + L+
Sbjct: 2612 EAGSIPNGQEQEAPDSAEGTTLTVLPEGEE-LPLCVSESNGLELPPSAASDEPLQEPLEA 2670
Query: 950 NRGQRKVTV------SARTNRRCQTAE--ADSESDHEVPEPESEMKMRLPRRAKTAALE 1000
+R ++T S + TAE A S S PE R PRR +A +E
Sbjct: 2671 DRTSEELTEAKTPTSSPEKPQELVTAEVAAPSTSSSATSSPEGPSPARPPRRRTSADVE 2729
>gi|20149594 heat shock 90kDa protein 1, beta [Homo sapiens]
Length = 724
Score = 36.2 bits (82), Expect = 0.16
Identities = 17/61 (27%), Positives = 34/61 (55%)
Query: 647 DQLMTFGIEPFKTKKIKTLHCEGTEINSDDEQESKEVEETATAKNVLKLLSDFLDSEVSE 706
D+ ++ F K + ++ EG E+ D+E++ K E A +N+ KL+ + LD +V +
Sbjct: 518 DEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEK 577
Query: 707 L 707
+
Sbjct: 578 V 578
>gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo
sapiens]
Length = 5033
Score = 35.8 bits (81), Expect = 0.21
Identities = 29/133 (21%), Positives = 56/133 (42%), Gaps = 1/133 (0%)
Query: 867 LLVLLNEILEQVKDRTCLRALEKIKIQLEKGNKEFGDQAEAAQDATLTTTTFQNEDEKNK 926
L V++ E L+ ++ EK + N +G+ + ++ EK+K
Sbjct: 2743 LNVIIPEKLDSFINKFAEYTHEKWAFDKIQNNWSYGENIDEELKTHPMLRPYKTFSEKDK 2802
Query: 927 EVYMTPLR-GVKATQASKSTQLKTNRGQRKVTVSARTNRRCQTAEADSESDHEVPEPESE 985
E+Y P++ +KA A + T K G+ + T +T + Q+A+ + P+P
Sbjct: 2803 EIYRWPIKESLKAMIAWEWTIEKAREGEEEKTEKKKTRKISQSAQTYDPREGYNPQPPDL 2862
Query: 986 MKMRLPRRAKTAA 998
+ L R + A
Sbjct: 2863 SAVTLSRELQAMA 2875
>gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo
sapiens]
Length = 5038
Score = 35.8 bits (81), Expect = 0.21
Identities = 29/133 (21%), Positives = 56/133 (42%), Gaps = 1/133 (0%)
Query: 867 LLVLLNEILEQVKDRTCLRALEKIKIQLEKGNKEFGDQAEAAQDATLTTTTFQNEDEKNK 926
L V++ E L+ ++ EK + N +G+ + ++ EK+K
Sbjct: 2743 LNVIIPEKLDSFINKFAEYTHEKWAFDKIQNNWSYGENIDEELKTHPMLRPYKTFSEKDK 2802
Query: 927 EVYMTPLR-GVKATQASKSTQLKTNRGQRKVTVSARTNRRCQTAEADSESDHEVPEPESE 985
E+Y P++ +KA A + T K G+ + T +T + Q+A+ + P+P
Sbjct: 2803 EIYRWPIKESLKAMIAWEWTIEKAREGEEEKTEKKKTRKISQSAQTYDPREGYNPQPPDL 2862
Query: 986 MKMRLPRRAKTAA 998
+ L R + A
Sbjct: 2863 SAVTLSRELQAMA 2875
>gi|109638749 signal recognition particle 72kDa [Homo sapiens]
Length = 671
Score = 35.0 bits (79), Expect = 0.36
Identities = 37/178 (20%), Positives = 74/178 (41%), Gaps = 27/178 (15%)
Query: 153 DKIPNVRIQAVLALSRLQDPKDDECPVVNAYATLIEN--DSNPEVRRAVLSCIAPSAKTL 210
DK+ + Q + L R DEC V Y L+ N D E R+ LS + +
Sbjct: 109 DKLKELYGQVLYRLERY-----DECLAV--YRDLVRNSQDDYDEERKTNLSAVVAAQSNW 161
Query: 211 PKIVGRTKDVKEAVRKLAYQVLAEKVHMRAMSIAQRVM-----LLQQGLNDRSDAVKQAM 265
K+V ++E +L Y + ++ A +++ L ++ L++ +D ++
Sbjct: 162 EKVVPENLGLQEGTHELCYNTACALIGQGQLNQAMKILQKAEDLCRRSLSEDTDGTEEDP 221
Query: 266 QKHL--LQGWLRFSEGNILELLHRLDVENSSEVAVSVLNALFSITPLS-ELVGLCKNN 320
Q L + G ++ + L ++ +E A+ + N + + P L+ + NN
Sbjct: 222 QAELAIIHG----------QMAYILQLQGRTEEALQLYNQIIKLKPTDVGLLAVIANN 269
>gi|239741673 PREDICTED: protein immuno-reactive with anti-PTH
polyclonal antibodies [Homo sapiens]
Length = 1430
Score = 34.7 bits (78), Expect = 0.47
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 909 QDATLTTTTFQNEDEKNKEVYMTPLRGVKATQASKSTQLKTNRGQRKVTVSARTNRRCQT 968
+D+ L+ + + EK++ V G+KAT+ K + L RG++ + R + Q
Sbjct: 551 EDSVLSIAREEKDGEKSRTVSSEQPPGLKATRDEKDSLLNIARGKKYGEKTRRVSSHKQP 610
Query: 969 A-EADSESDHEVPEPESEMK 987
A +A S+ ++ VP +E K
Sbjct: 611 ALKATSDKENSVPNMATETK 630
>gi|60498978 elastin microfibril interfacer 2 [Homo sapiens]
Length = 1053
Score = 34.7 bits (78), Expect = 0.47
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 14/133 (10%)
Query: 416 EEGGRKKLLAVLQEILILPTIPISLVSFLV---ERLLHIIIDDNKRTQIVTEIISEIRAP 472
+E KK+ + +++L L + L S L E L H DD RT+ + S+ P
Sbjct: 177 QELQEKKIQVLEEKVLRLTRTVLDLQSSLAGVSENLKHATQDDASRTR-APGLSSQHPKP 235
Query: 473 IVTVGVNND----PADVRKKELKMAEIKVKLIEAKEALENCITLQDFNRASELKEEIKAL 528
TV + + P KE M +IK +L E K+ L+N ++ EL ++K
Sbjct: 236 DTTVSGDTETGQSPGVFNTKESGMKDIKSELAEVKDTLKN-----KSDKLEELDGKVKGY 290
Query: 529 EDARINLLKETEQ 541
E ++ L+E Q
Sbjct: 291 E-GQLRQLQEAAQ 302
>gi|223555935 dynein, axonemal, heavy polypeptide 14 isoform 1 [Homo
sapiens]
Length = 4515
Score = 34.3 bits (77), Expect = 0.61
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 504 EALENC-ITLQDFNRASELKEEIKALEDARINLLKETEQLEIKEVHIEKNDAETLQKCLI 562
E L+NC I L+ ++ E E+K L R L E L+I + + E++Q L+
Sbjct: 1272 EILQNCNIHLEHIKKSLEDYLEVKRLIFPRFYFLSNAELLDILA---DSRNPESVQPHLV 1328
Query: 563 LCYELLKQMSI------STGLSATMNGIIESLILPGIISIHPVVRNLAV 605
C+E +KQ+ I + ++ E L+LP I + V V
Sbjct: 1329 KCFENIKQLLIWKQDIGPPAVKMLISAEGEGLVLPKKIRVRSAVEQWLV 1377
>gi|62243374 MAD1-like 1 protein [Homo sapiens]
Length = 718
Score = 34.3 bits (77), Expect = 0.61
Identities = 24/97 (24%), Positives = 50/97 (51%), Gaps = 12/97 (12%)
Query: 871 LNEILEQVKDRTCLRALEKIKIQLEKGNKEFGDQAEAAQDATLTTTTFQNEDEKNKEVYM 930
L E EQ++ ++ L +E+ K+Q+E +K + E A A+ + ++ E ++N+E+ +
Sbjct: 51 LEERAEQIRSKSHLIQVEREKMQMELSHKRARVELERA--ASTSARNYEREVDRNQEL-L 107
Query: 931 TPLRGVKATQASKSTQLKTNRGQRKVTVSARTNRRCQ 967
T +R ++ +A + K+ NR+CQ
Sbjct: 108 TRIRQLQEREAG---------AEEKMQEQLERNRQCQ 135
>gi|62243369 MAD1-like 1 protein [Homo sapiens]
Length = 718
Score = 34.3 bits (77), Expect = 0.61
Identities = 24/97 (24%), Positives = 50/97 (51%), Gaps = 12/97 (12%)
Query: 871 LNEILEQVKDRTCLRALEKIKIQLEKGNKEFGDQAEAAQDATLTTTTFQNEDEKNKEVYM 930
L E EQ++ ++ L +E+ K+Q+E +K + E A A+ + ++ E ++N+E+ +
Sbjct: 51 LEERAEQIRSKSHLIQVEREKMQMELSHKRARVELERA--ASTSARNYEREVDRNQEL-L 107
Query: 931 TPLRGVKATQASKSTQLKTNRGQRKVTVSARTNRRCQ 967
T +R ++ +A + K+ NR+CQ
Sbjct: 108 TRIRQLQEREAG---------AEEKMQEQLERNRQCQ 135
>gi|62243332 MAD1-like 1 protein [Homo sapiens]
Length = 718
Score = 34.3 bits (77), Expect = 0.61
Identities = 24/97 (24%), Positives = 50/97 (51%), Gaps = 12/97 (12%)
Query: 871 LNEILEQVKDRTCLRALEKIKIQLEKGNKEFGDQAEAAQDATLTTTTFQNEDEKNKEVYM 930
L E EQ++ ++ L +E+ K+Q+E +K + E A A+ + ++ E ++N+E+ +
Sbjct: 51 LEERAEQIRSKSHLIQVEREKMQMELSHKRARVELERA--ASTSARNYEREVDRNQEL-L 107
Query: 931 TPLRGVKATQASKSTQLKTNRGQRKVTVSARTNRRCQ 967
T +R ++ +A + K+ NR+CQ
Sbjct: 108 TRIRQLQEREAG---------AEEKMQEQLERNRQCQ 135
>gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]
Length = 1684
Score = 33.9 bits (76), Expect = 0.80
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 9/93 (9%)
Query: 889 KIKIQLEKGNKEFGDQAEAAQDATLTTTTFQNEDEKNK---EVYMTPLRGVKATQASKST 945
KIK L K KE D +A D + + + E E ++ EVY L + + +
Sbjct: 1220 KIKQLLVKTKKELADSKQAETDHLILQASLKGELEASQQQVEVYKIQLAEITSEKHKIHE 1279
Query: 946 QLKTNRGQRKVTVSARTNR------RCQTAEAD 972
LKT+ Q + T+SA R C+ A+A+
Sbjct: 1280 HLKTSAEQHQRTLSAYQQRVTALQEECRAAKAE 1312
Score = 32.7 bits (73), Expect = 1.8
Identities = 27/110 (24%), Positives = 59/110 (53%), Gaps = 15/110 (13%)
Query: 478 VNNDPADVRKK------ELKMAEIKVKLIE-AKEALENCITLQDFNRASELKEE---IKA 527
+N+D D+ + K+ E+++ ++ AK ++ + + + ++KE +
Sbjct: 1064 INSDNEDLLARIETLQSNAKLLEVQILEVQRAKAMVDKELEAEKLQKEQKIKEHATTVNE 1123
Query: 528 LEDARINLLKETEQLE--IKEVHIEKNDAE--TLQKCLILCYE-LLKQMS 572
LE+ ++ L KE +QL+ ++E+ + K DA+ TL I YE L+K+++
Sbjct: 1124 LEELQVQLQKEKKQLQKTMQELELVKKDAQQTTLMNMEIADYERLMKELN 1173
>gi|41055989 M-phase phosphoprotein 8 [Homo sapiens]
Length = 860
Score = 33.5 bits (75), Expect = 1.0
Identities = 21/64 (32%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 482 PADVRKKELKMAEIKVKLI-EAKEALENCI-TLQDFNRASELKEEIKALEDARINLLKET 539
P D++KK+ K ++K K + + +LE+ + L+ R SE KEE+K + + + +KET
Sbjct: 165 PDDLKKKKAKAGKLKDKSKPDLESSLESLVFDLRTKKRISEAKEELKESKKPKKDEVKET 224
Query: 540 EQLE 543
++L+
Sbjct: 225 KELK 228
>gi|5453886 serpin peptidase inhibitor, clade I (pancpin), member 2
[Homo sapiens]
Length = 405
Score = 33.5 bits (75), Expect = 1.0
Identities = 46/197 (23%), Positives = 82/197 (41%), Gaps = 13/197 (6%)
Query: 515 FNRASELKEEIKALEDARINLLKETEQLEIKEVHIEKNDAETLQKCLILCYELLKQMS-- 572
F+ SE K+E N L E +KE ++ N ++ ++ K +
Sbjct: 93 FSAISEKKQEFTF---NLANALYLQEGFTVKEQYLHGNKEFFQSAIKLVDFQDAKACAEM 149
Query: 573 ISTGLSATMNGIIESLILPGIISIHPVVRNLAVLCLGCCGLQNQDFARKHFVLLLQVLQI 632
IST + +G I+ + P+ R + V + G Q F RK L+ +
Sbjct: 150 ISTWVERKTDGKIKDMFSGE--EFGPLTRLVLVNAIYFKGDWKQKF-RKEDTQLINFTKK 206
Query: 633 DDVTIKISALKAIFDQLMTFGIEPFKTKKIKTLHCEGTEIN-----SDDEQESKEVEETA 687
+ T+KI +KA+ + E ++ L +G E + + + +EVE+
Sbjct: 207 NGSTVKIPMMKALLRTKYGYFSESSLNYQVLELSYKGDEFSLIIILPAEGMDIEEVEKLI 266
Query: 688 TAKNVLKLLSDFLDSEV 704
TA+ +LK LS+ + EV
Sbjct: 267 TAQQILKWLSEMQEEEV 283
>gi|13994289 fibronectin type III and SPRY domain containing 1-like
isoform 2 [Homo sapiens]
Length = 145
Score = 33.1 bits (74), Expect = 1.4
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 499 LIEAKEALENCITLQDFNRASELKEEI----KALEDARINLLKETEQLEIKEVH----IE 550
L E KE++ NCI + ++ EL+ +I ALE++ L T L+IKE +
Sbjct: 58 LDEVKESMINCIKQEQARKSQELQSQISQCNNALENSEELLEFATRSLDIKEPEEFSKVH 117
Query: 551 KNDAETLQK 559
KN TL K
Sbjct: 118 KNCINTLNK 126
>gi|187761324 shootin1 isoform a [Homo sapiens]
Length = 631
Score = 33.1 bits (74), Expect = 1.4
Identities = 18/69 (26%), Positives = 39/69 (56%)
Query: 505 ALENCITLQDFNRASELKEEIKALEDARINLLKETEQLEIKEVHIEKNDAETLQKCLILC 564
A E C+++Q + EL+++I ++++ + L E E L+ K V + + + Q+ +L
Sbjct: 131 AAETCVSVQCQKQIKELRDQIVSVQEEKKILAIELENLKSKLVEVIEEVNKVKQEKTVLN 190
Query: 565 YELLKQMSI 573
E+L+Q +
Sbjct: 191 SEVLEQRKV 199
>gi|50511340 shootin1 isoform b [Homo sapiens]
Length = 456
Score = 33.1 bits (74), Expect = 1.4
Identities = 18/69 (26%), Positives = 39/69 (56%)
Query: 505 ALENCITLQDFNRASELKEEIKALEDARINLLKETEQLEIKEVHIEKNDAETLQKCLILC 564
A E C+++Q + EL+++I ++++ + L E E L+ K V + + + Q+ +L
Sbjct: 131 AAETCVSVQCQKQIKELRDQIVSVQEEKKILAIELENLKSKLVEVIEEVNKVKQEKTVLN 190
Query: 565 YELLKQMSI 573
E+L+Q +
Sbjct: 191 SEVLEQRKV 199
>gi|81295809 pericentrin [Homo sapiens]
Length = 3336
Score = 32.7 bits (73), Expect = 1.8
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 19/98 (19%)
Query: 489 ELKMAEIKVKLIE------AKEALENCITLQDFNRASELKEEIKALEDARINLLKETEQL 542
EL +++ KL E KE+ + + +Q+ EEIK LE+ IN+ K+ QL
Sbjct: 1530 ELLQQKLREKLDEFNELAIQKESADRQVLMQE--------EEIKRLEEMNINIRKKVAQL 1581
Query: 543 EIKEVHIEKNDAETLQKCLILCYELLKQMSISTGLSAT 580
+ +EV +KN + L++ E+LK+ +S+ L A+
Sbjct: 1582 Q-EEVEKQKNIVKGLEQ----DKEVLKKQQMSSLLLAS 1614
>gi|124517695 ankyrin repeat domain 36B [Homo sapiens]
Length = 1121
Score = 32.7 bits (73), Expect = 1.8
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 909 QDATLTTTTFQNEDEKNKEVYMTPLRGVKATQASKSTQLKTNRGQRKVTVSARTNRRCQ- 967
+D+ L + + EK++ V G+KAT+ K + L RG++ + R + Q
Sbjct: 242 EDSVLNIAREKKDGEKSRTVSFEQPPGLKATRDEKDSLLNIARGKKDGEKTRRVSSHKQP 301
Query: 968 TAEADSESDHEVPEPESEMK 987
+ +A S+ + VP +E K
Sbjct: 302 SLKATSDKEDSVPNMATETK 321
>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
Length = 1960
Score = 32.3 bits (72), Expect = 2.3
Identities = 50/213 (23%), Positives = 87/213 (40%), Gaps = 45/213 (21%)
Query: 800 ELLVDLT--RPSGLNPQAKTSQDYQALTVHDNLAMKICNEILTSPCSPEIRVYTKALS-- 855
+LLVDL R S N + K + Q L ++ K E + + TKALS
Sbjct: 1424 DLLVDLDHQRQSACNLEKKQKKFDQLLAEEKTISAKYAEERDRAEAEAREKE-TKALSLA 1482
Query: 856 -----SLELSSHLAK----------DLLVLLNEILEQVKD-----RTCLRALEKIKIQLE 895
++E + L + DL+ +++ + V + R + +E++K QLE
Sbjct: 1483 RALEEAMEQKAELERLNKQFRTEMEDLMSSKDDVGKSVHELEKSKRALEQQVEEMKTQLE 1542
Query: 896 KGNKEFGDQAEAAQDATLTTTT------------FQNEDEKNKEVYMTPLRGVKATQASK 943
E D+ +A +DA L Q DE+++E +R V+ +A
Sbjct: 1543 ----ELEDELQATEDAKLRLEVNLQAMKAQFERDLQGRDEQSEEKKKQLVRQVREMEA-- 1596
Query: 944 STQLKTNRGQRKVTVSARTNRRCQTAEADSESD 976
+L+ R QR + V+AR + ++ D
Sbjct: 1597 --ELEDERKQRSMAVAARKKLEMDLKDLEAHID 1627
>gi|5729796 cytochrome P450, family 46 [Homo sapiens]
Length = 500
Score = 32.3 bits (72), Expect = 2.3
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 58 VYKREPAVERVIEFAAKFVTSFHQSDMEDDEEEEDGGLLNYLFTFLLKSHEANSNAVRFR 117
V +R A++R E A +T +++ + ++D GLL+ TF + HE ++N + F
Sbjct: 258 VQRRREALKRGEEVPADILTQILKAE---EGAQDDEGLLDNFVTFFIAGHETSANHLAFT 314
Query: 118 V 118
V
Sbjct: 315 V 315
>gi|224451077 HBV PreS1-transactivated protein 3 isoform b [Homo
sapiens]
Length = 399
Score = 32.0 bits (71), Expect = 3.0
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 14/90 (15%)
Query: 450 HIIIDDNKRTQIVTEIISEIRAPIVTVGVNNDPADVRKKELKMAEIKVKLIEAKEALENC 509
H+ +DN +I + +PI V D +D+ E+KM E+KV I+A++
Sbjct: 177 HLYNEDN------VDISEDTLSPITDVNEAVDVSDLNATEIKMPEVKVPEIKAEQ----- 225
Query: 510 ITLQDFNRASELKEEIKALEDARINLLKET 539
QD N E+ L + + NL K T
Sbjct: 226 ---QDVNVNPEITALQTMLAECQENLKKLT 252
>gi|93102389 HBV PreS1-transactivated protein 3 isoform a [Homo
sapiens]
Length = 390
Score = 32.0 bits (71), Expect = 3.0
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 14/90 (15%)
Query: 450 HIIIDDNKRTQIVTEIISEIRAPIVTVGVNNDPADVRKKELKMAEIKVKLIEAKEALENC 509
H+ +DN +I + +PI V D +D+ E+KM E+KV I+A++
Sbjct: 177 HLYNEDN------VDISEDTLSPITDVNEAVDVSDLNATEIKMPEVKVPEIKAEQ----- 225
Query: 510 ITLQDFNRASELKEEIKALEDARINLLKET 539
QD N E+ L + + NL K T
Sbjct: 226 ---QDVNVNPEITALQTMLAECQENLKKLT 252
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 32.0 bits (71), Expect = 3.0
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 20/110 (18%)
Query: 480 NDPADVRKKEL--------KMAEIKVKLIEAKEALENCITLQD--FNRASELKEEIKALE 529
N D+ KEL ++ E K + KEA E +TL++ ++ +EL+ + K LE
Sbjct: 1552 NQQKDIEHKELVQKLQHFQELGEEKDNRV--KEAEEKILTLENQVYSMKAELETKKKELE 1609
Query: 530 DARINLLKETEQLEIKEVHIEKNDAETL--------QKCLILCYELLKQM 571
+++ + E+L+ E +E A L QK + +LL QM
Sbjct: 1610 HVNLSVKSKEEELKALEDRLESESAAKLAELKRKAEQKIAAIKKQLLSQM 1659
>gi|190341068 forkhead-associated (FHA) phosphopeptide binding
domain 1 [Homo sapiens]
Length = 1412
Score = 32.0 bits (71), Expect = 3.0
Identities = 16/62 (25%), Positives = 34/62 (54%)
Query: 485 VRKKELKMAEIKVKLIEAKEALENCITLQDFNRASELKEEIKALEDARINLLKETEQLEI 544
+ ++ K+ +++ L + KE E+ I + +++E K ++D L K+ E+LE+
Sbjct: 777 LESEKRKVQDLENHLTQQKEISESNIAYEKRKAKEAMEKEKKKVQDLENRLTKQKEELEL 836
Query: 545 KE 546
KE
Sbjct: 837 KE 838
>gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo
sapiens]
Length = 1843
Score = 31.6 bits (70), Expect = 4.0
Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Query: 460 QIVTEIISEIRAPIVTVGVNNDPADVRKKELKMAEIKVKLIE-----AKEALENCITLQD 514
Q +T+ + E+R + +V N +KE + KV+++E K++L+NC L
Sbjct: 470 QSLTKTVEELRTTVDSVEGNASKILKMEKENQRLSKKVEILENEIVQEKQSLQNCQNLSK 529
Query: 515 FNRASELKEEIKALEDARINLLKETEQLEIKEVHIEKNDAETLQKCLI 562
+ E + K +E R N ++ + LE + H+ + + Q+ I
Sbjct: 530 -DLMKEKAQLEKTIETLRENSERQIKILEQENEHLNQTVSSLRQRSQI 576
Score = 30.4 bits (67), Expect = 8.8
Identities = 44/187 (23%), Positives = 81/187 (43%), Gaps = 10/187 (5%)
Query: 404 QLILIIKSLDTSEEGGRKKLLAVLQEILILPTIPISLVSFLVE--RLLHIIIDDNKRTQI 461
QL L K L++ +E +K L + + +S +E RL + + NK+ Q
Sbjct: 722 QLQLENKELESEKEQLKKGLELLKASFKKTERLEVSYQGLDIENQRLQKTLENSNKKIQQ 781
Query: 462 VTEIISEIRAPIVTVGVNNDPADVRKKELKMAEIKVKLI--EAKEALENCITLQDFNRAS 519
+ + ++ T+ N + + K L+ E + K + E + ++ L+ N+
Sbjct: 782 LESELQDLEMENQTLQKNLEELKISSKRLEQLEKENKSLEQETSQLEKDKKQLEKENKRL 841
Query: 520 ELKEEIK--ALEDARI---NLLKETEQLEIKEVHIEKNDAETLQKCLILCYELLKQMSIS 574
+ EIK LE+ + NL KE + L KE+ I K L++ EL+K+ +I
Sbjct: 842 RQQAEIKDTTLEENNVKIGNLEKENKTLS-KEIGIYKESCVRLKELEKENKELVKRATID 900
Query: 575 TGLSATM 581
T+
Sbjct: 901 IKTLVTL 907
>gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo
sapiens]
Length = 1870
Score = 31.6 bits (70), Expect = 4.0
Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Query: 460 QIVTEIISEIRAPIVTVGVNNDPADVRKKELKMAEIKVKLIE-----AKEALENCITLQD 514
Q +T+ + E+R + +V N +KE + KV+++E K++L+NC L
Sbjct: 470 QSLTKTVEELRTTVDSVEGNASKILKMEKENQRLSKKVEILENEIVQEKQSLQNCQNLSK 529
Query: 515 FNRASELKEEIKALEDARINLLKETEQLEIKEVHIEKNDAETLQKCLI 562
+ E + K +E R N ++ + LE + H+ + + Q+ I
Sbjct: 530 -DLMKEKAQLEKTIETLRENSERQIKILEQENEHLNQTVSSLRQRSQI 576
Score = 30.4 bits (67), Expect = 8.8
Identities = 44/187 (23%), Positives = 81/187 (43%), Gaps = 10/187 (5%)
Query: 404 QLILIIKSLDTSEEGGRKKLLAVLQEILILPTIPISLVSFLVE--RLLHIIIDDNKRTQI 461
QL L K L++ +E +K L + + +S +E RL + + NK+ Q
Sbjct: 722 QLQLENKELESEKEQLKKGLELLKASFKKTERLEVSYQGLDIENQRLQKTLENSNKKIQQ 781
Query: 462 VTEIISEIRAPIVTVGVNNDPADVRKKELKMAEIKVKLI--EAKEALENCITLQDFNRAS 519
+ + ++ T+ N + + K L+ E + K + E + ++ L+ N+
Sbjct: 782 LESELQDLEMENQTLQKNLEELKISSKRLEQLEKENKSLEQETSQLEKDKKQLEKENKRL 841
Query: 520 ELKEEIK--ALEDARI---NLLKETEQLEIKEVHIEKNDAETLQKCLILCYELLKQMSIS 574
+ EIK LE+ + NL KE + L KE+ I K L++ EL+K+ +I
Sbjct: 842 RQQAEIKDTTLEENNVKIGNLEKENKTLS-KEIGIYKESCVRLKELEKENKELVKRATID 900
Query: 575 TGLSATM 581
T+
Sbjct: 901 IKTLVTL 907
>gi|40538794 coiled-coil domain containing 21 [Homo sapiens]
Length = 762
Score = 31.6 bits (70), Expect = 4.0
Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 475 TVGVNNDPADVRKKELKMAEIKVKLIEAKEALENCITLQDFNRASELKEEIKALEDARIN 534
T ++ + D+ KK L +E++V+LI +E+L+ + LQ + + +EE D IN
Sbjct: 402 TEALSREKIDLEKK-LSASEVEVQLI--RESLK--VALQKHSEEVKKQEERVKGRDKHIN 456
Query: 535 LLKETEQLEIKEVHIEKNDAETLQKCL 561
LK+ Q E ++ ++ ETL++ L
Sbjct: 457 NLKKKCQKESEQNREKQQRIETLERYL 483
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,206,371
Number of Sequences: 37866
Number of extensions: 1400165
Number of successful extensions: 5591
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 5478
Number of HSP's gapped (non-prelim): 186
length of query: 1015
length of database: 18,247,518
effective HSP length: 112
effective length of query: 903
effective length of database: 14,006,526
effective search space: 12647892978
effective search space used: 12647892978
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.