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Search of human proteins with 212720630
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|212720630 transmembrane protein 120B [Homo sapiens]
(339 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|212720630 transmembrane protein 120B [Homo sapiens] 699 0.0
gi|13994300 transmembrane protein 120A [Homo sapiens] 499 e-141
gi|7705415 hook homolog 1 [Homo sapiens] 38 0.011
gi|238908495 similar to pleckstrin homology domain protein (5V32... 37 0.019
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 37 0.033
gi|58530840 desmoplakin isoform I [Homo sapiens] 36 0.056
gi|21735548 centrosomal protein 2 [Homo sapiens] 35 0.096
gi|4506467 radixin [Homo sapiens] 35 0.096
gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta ... 35 0.096
gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo sa... 35 0.13
gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo s... 35 0.13
gi|71061468 centromere protein E [Homo sapiens] 35 0.13
gi|49640011 tetratricopeptide repeat domain 3 [Homo sapiens] 35 0.13
gi|49640009 tetratricopeptide repeat domain 3 [Homo sapiens] 35 0.13
gi|149363685 hypothetical protein LOC23379 [Homo sapiens] 34 0.16
gi|47519616 tropomyosin 2 (beta) isoform 2 [Homo sapiens] 34 0.16
gi|224922812 tropomyosin 2 (beta) isoform 3 [Homo sapiens] 34 0.16
gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens] 34 0.16
gi|63252906 tropomyosin 1 alpha chain isoform 7 [Homo sapiens] 33 0.28
gi|63252900 tropomyosin 1 alpha chain isoform 4 [Homo sapiens] 33 0.28
gi|42476296 tropomyosin 2 (beta) isoform 1 [Homo sapiens] 33 0.36
gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens] 33 0.48
gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens] 33 0.48
gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens] 33 0.48
gi|27597085 tropomyosin 1 alpha chain isoform 5 [Homo sapiens] 33 0.48
gi|167555110 kinesin family member C1 [Homo sapiens] 33 0.48
gi|73623035 sperm associated antigen 5 [Homo sapiens] 33 0.48
gi|33946313 ninein isoform 4 [Homo sapiens] 33 0.48
gi|33946321 ninein isoform 5 [Homo sapiens] 33 0.48
gi|148536871 ninein isoform 1 [Homo sapiens] 33 0.48
>gi|212720630 transmembrane protein 120B [Homo sapiens]
Length = 339
Score = 699 bits (1803), Expect = 0.0
Identities = 339/339 (100%), Positives = 339/339 (100%)
Query: 1 MSGQLERCEREWHELEGEFQELQETHRIYKQKLEELAALQTLCSSSISKQKKHLKDLKLT 60
MSGQLERCEREWHELEGEFQELQETHRIYKQKLEELAALQTLCSSSISKQKKHLKDLKLT
Sbjct: 1 MSGQLERCEREWHELEGEFQELQETHRIYKQKLEELAALQTLCSSSISKQKKHLKDLKLT 60
Query: 61 LQRCKRHASREEAELVQQMAANIKERQDVFFDMEAYLPKKNGLYLNLVLGNVNVTLLSNQ 120
LQRCKRHASREEAELVQQMAANIKERQDVFFDMEAYLPKKNGLYLNLVLGNVNVTLLSNQ
Sbjct: 61 LQRCKRHASREEAELVQQMAANIKERQDVFFDMEAYLPKKNGLYLNLVLGNVNVTLLSNQ 120
Query: 121 AKFAYKDEYEKFKLYLTIILLLGAVACRFVLHYRVTDEVFNFLLVWYYCTLTIRESILIS 180
AKFAYKDEYEKFKLYLTIILLLGAVACRFVLHYRVTDEVFNFLLVWYYCTLTIRESILIS
Sbjct: 121 AKFAYKDEYEKFKLYLTIILLLGAVACRFVLHYRVTDEVFNFLLVWYYCTLTIRESILIS 180
Query: 181 NGSRIKGWWVSHHYVSTFLSGVMLTWPNGPIYQKFRNQFLAFSIFQSCVQFLQYYYQRGC 240
NGSRIKGWWVSHHYVSTFLSGVMLTWPNGPIYQKFRNQFLAFSIFQSCVQFLQYYYQRGC
Sbjct: 181 NGSRIKGWWVSHHYVSTFLSGVMLTWPNGPIYQKFRNQFLAFSIFQSCVQFLQYYYQRGC 240
Query: 241 LYRLRALGERNHLDLTVEGFQSWMWRGLTFLLPFLFCGHFWQLYNAVTLFELSSHEECRE 300
LYRLRALGERNHLDLTVEGFQSWMWRGLTFLLPFLFCGHFWQLYNAVTLFELSSHEECRE
Sbjct: 241 LYRLRALGERNHLDLTVEGFQSWMWRGLTFLLPFLFCGHFWQLYNAVTLFELSSHEECRE 300
Query: 301 WQVFVLAFTFLILFLGNFLTTLKVVHAKLQKNRGKTKQP 339
WQVFVLAFTFLILFLGNFLTTLKVVHAKLQKNRGKTKQP
Sbjct: 301 WQVFVLAFTFLILFLGNFLTTLKVVHAKLQKNRGKTKQP 339
>gi|13994300 transmembrane protein 120A [Homo sapiens]
Length = 343
Score = 499 bits (1286), Expect = e-141
Identities = 237/336 (70%), Positives = 278/336 (82%)
Query: 3 GQLERCEREWHELEGEFQELQETHRIYKQKLEELAALQTLCSSSISKQKKHLKDLKLTLQ 62
G L C R+W +L+ +FQ +QETHR+Y+ KLEEL LQ C+SSI++QKK L++L L L+
Sbjct: 7 GPLGDCLRDWEDLQQDFQNIQETHRLYRLKLEELTKLQNNCTSSITRQKKRLQELALALK 66
Query: 63 RCKRHASREEAELVQQMAANIKERQDVFFDMEAYLPKKNGLYLNLVLGNVNVTLLSNQAK 122
+CK E Q++ +KERQ +FFDMEAYLPKKNGLYL+LVLGNVNVTLLS QAK
Sbjct: 67 KCKPSLPAEAEGAAQELENQMKERQGLFFDMEAYLPKKNGLYLSLVLGNVNVTLLSKQAK 126
Query: 123 FAYKDEYEKFKLYLTIILLLGAVACRFVLHYRVTDEVFNFLLVWYYCTLTIRESILISNG 182
FAYKDEYEKFKLYLTIIL+L + CRF+L+ RVTD FNFLLVWYYCTLTIRESILI+NG
Sbjct: 127 FAYKDEYEKFKLYLTIILILISFTCRFLLNSRVTDAAFNFLLVWYYCTLTIRESILINNG 186
Query: 183 SRIKGWWVSHHYVSTFLSGVMLTWPNGPIYQKFRNQFLAFSIFQSCVQFLQYYYQRGCLY 242
SRIKGWWV HHYVSTFLSGVMLTWP+G +YQKFRNQFL+FS++QS VQFLQYYYQ GCLY
Sbjct: 187 SRIKGWWVFHHYVSTFLSGVMLTWPDGLMYQKFRNQFLSFSMYQSFVQFLQYYYQSGCLY 246
Query: 243 RLRALGERNHLDLTVEGFQSWMWRGLTFLLPFLFCGHFWQLYNAVTLFELSSHEECREWQ 302
RLRALGER+ +DLTVEGFQSWMWRGLTFLLPFLF GHFWQL+NA+TLF L+ +C+EWQ
Sbjct: 247 RLRALGERHTMDLTVEGFQSWMWRGLTFLLPFLFFGHFWQLFNALTLFNLAQDPQCKEWQ 306
Query: 303 VFVLAFTFLILFLGNFLTTLKVVHAKLQKNRGKTKQ 338
V + F FL+LFLGNF TTL+VVH K R +K+
Sbjct: 307 VLMCGFPFLLLFLGNFFTTLRVVHHKFHSQRHGSKK 342
>gi|7705415 hook homolog 1 [Homo sapiens]
Length = 728
Score = 38.1 bits (87), Expect = 0.011
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 11/137 (8%)
Query: 7 RCEREWHELEGEFQELQETHRIYKQKLEELAALQTLCSSSISKQKKHLKDLKLTLQRCKR 66
R ++E E E +ELQE +K+ EL Q L I + ++ ++DL+ +LQ
Sbjct: 478 RLQQEGSENE-RIEELQEQLEQKHRKMNELETEQRLSKERIRELQQQIEDLQKSLQ---E 533
Query: 67 HASREEAELVQQMAANIKERQDVFFDMEAYLPKKNGLYLNLVLG-NVNVTLLSN-QAKFA 124
S+ E E ++ ++ + ++ L KK L +L N NV ++ +A
Sbjct: 534 QGSKSEGESSSKLKQKLEAHMEKLTEVHEELQKKQELIEDLQPDINQNVQKINELEAALQ 593
Query: 125 YKDE-----YEKFKLYL 136
KDE E++K+YL
Sbjct: 594 KKDEDMKAMEERYKMYL 610
Score = 34.3 bits (77), Expect = 0.16
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 4 QLERCEREWHELEGEFQELQETHRIYKQKLEEL-AALQTLCSSSISKQKKHLKDLKLTLQ 62
QLE+ R+ +ELE E + +E R +Q++E+L +LQ S S + LK KL
Sbjct: 495 QLEQKHRKMNELETEQRLSKERIRELQQQIEDLQKSLQEQGSKSEGESSSKLKQ-KLEAH 553
Query: 63 RCKRHASREE----AELVQQMAANIKERQDVFFDMEAYLPKKN 101
K EE EL++ + +I + ++EA L KK+
Sbjct: 554 MEKLTEVHEELQKKQELIEDLQPDINQNVQKINELEAALQKKD 596
>gi|238908495 similar to pleckstrin homology domain protein (5V327)
[Homo sapiens]
Length = 506
Score = 37.4 bits (85), Expect = 0.019
Identities = 24/104 (23%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 4 QLERCEREWHELEGEFQELQETHRIYKQKLEELAALQTLCSSSISKQKKHLKDLKLTLQR 63
+LER + + +F+E+ + R+ +++++ L C + ++KK L+ L +LQ+
Sbjct: 186 ELERLNQVLEAEKQQFEEVVQELRMEQEQIKRELELTARCLKGVEQEKKELRHLTESLQQ 245
Query: 64 CKRHASREEAELVQQMAANIKERQDVFFDMEAYLPKKNGLYLNL 107
S E+ + ++ + N Q + E P GL+ NL
Sbjct: 246 TLEELSIEKKKTLEMLEENENHLQTLANQSE-QPPPSGGLHSNL 288
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 36.6 bits (83), Expect = 0.033
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 15 LEGEFQEL----QETHRIYKQKLEELAALQTLCSSSISKQKKHLKDLKLTLQRCKRHASR 70
L+GE +EL +ET +Y ELA L+ S + K L DL +L++CK
Sbjct: 2282 LQGENKELLSQLEETRHLYHSSQNELAKLE----SELKSLKDQLTDLSNSLEKCKEQKGN 2337
Query: 71 EEAELVQQMAANIKERQDVFFDMEAYL 97
E +++Q A+I+ + + +E L
Sbjct: 2338 LEG-IIRQQEADIQNSKFSYEQLETDL 2363
>gi|58530840 desmoplakin isoform I [Homo sapiens]
Length = 2871
Score = 35.8 bits (81), Expect = 0.056
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 1 MSGQLERCEREWHELEGEFQELQET---HRIYKQKLEELAALQTLCSSSISKQKKHLK-D 56
+ QL+R RE +L+ E L ++ +++ EE A Q C S I ++K+HL+ +
Sbjct: 1235 LRNQLDRLSRENRDLKDEIVRLNDSILQATEQRRRAEENALQQKACGSEIMQKKQHLEIE 1294
Query: 57 LKLTLQRCKRHASREEAELVQQMAANIKER 86
LK +Q+ +R + L ++ A I+++
Sbjct: 1295 LKQVMQQRSEDNARHKQSL-EEAAKTIQDK 1323
>gi|21735548 centrosomal protein 2 [Homo sapiens]
Length = 2442
Score = 35.0 bits (79), Expect = 0.096
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 1 MSGQLERCEREWHELEGEFQELQETHRIYKQKLEELAALQTLCSSSISKQKKHLKDLKLT 60
+ QL++ E EL+ + +++QE ++KL E Q ++ + + + K +
Sbjct: 664 LEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEV 723
Query: 61 LQRC---KRHASREEAELVQQMAANIKERQDV 89
L R K RE+A L ++ A ++RQD+
Sbjct: 724 LARAVQEKEALVREKAALEVRLQAVERDRQDL 755
Score = 30.8 bits (68), Expect = 1.8
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 5 LERCEREWHELEGEFQELQ-ETHRIYKQKLEE-LAALQTLCSSSISKQKKHLKDLKLTLQ 62
LE ERE ELE +E Q E I Q+ EE A LC + +K+ + L+ LQ
Sbjct: 877 LESLEREKMELEMRLKEQQTEMEAIQAQREEERTQAESALCQMQLETEKERVSLLETLLQ 936
Query: 63 RCKR--HASREEAELVQQM-AANIKERQ 87
K AS++ L Q M +KE++
Sbjct: 937 TQKELADASQQLERLRQDMKVQKLKEQE 964
>gi|4506467 radixin [Homo sapiens]
Length = 583
Score = 35.0 bits (79), Expect = 0.096
Identities = 22/94 (23%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 6 ERCEREWHELEGEFQELQETHRIYKQKLEELAALQTLCSSSISKQKKHLKDLKLTLQRCK 65
ER ERE EL ++++E +++LEE QT + + +++K K+ L++ +
Sbjct: 338 ERIEREKEELMERLKQIEEQTIKAQKELEE----QTRKALELDQERKRAKEEAERLEKER 393
Query: 66 RHASREEAELVQQMAANIKERQDVFFDMEAYLPK 99
R A ++ + +Q A +K ++ + ++ + K
Sbjct: 394 RAAEEAKSAIAKQAADQMKNQEQLAAELAEFTAK 427
>gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta [Homo
sapiens]
Length = 1983
Score = 35.0 bits (79), Expect = 0.096
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 6 ERCE---REWHELEGEFQELQETHRIYKQKLEELAALQTLCSSSISKQKKHLKDLKLTLQ 62
ERC + +LEG+ +EL E ++ +LAA + ++ KK + DLKLTL
Sbjct: 952 ERCHLLIKSKVQLEGKVKELSERLEDEEEVNADLAARRRKLEDECTELKKDIDDLKLTLA 1011
Query: 63 RCKRHASREE---AELVQQMAA 81
+ ++ E L ++MAA
Sbjct: 1012 KAEKEKQATENKVKNLTEEMAA 1033
>gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo
sapiens]
Length = 1843
Score = 34.7 bits (78), Expect = 0.13
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 5 LERCEREWHELEGEFQELQETHRIYKQKLEELAALQTLCSSSISKQKKHLKDLKLTLQRC 64
LE ++ +LE E Q+L+ ++ ++ LEEL + + + K+ K L+ L++
Sbjct: 772 LENSNKKIQQLESELQDLEMENQTLQKNLEEL-KISSKRLEQLEKENKSLEQETSQLEKD 830
Query: 65 KRHASREEAELVQQMAANIKE 85
K+ +E L QQ A IK+
Sbjct: 831 KKQLEKENKRLRQQ--AEIKD 849
>gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo
sapiens]
Length = 1870
Score = 34.7 bits (78), Expect = 0.13
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 5 LERCEREWHELEGEFQELQETHRIYKQKLEELAALQTLCSSSISKQKKHLKDLKLTLQRC 64
LE ++ +LE E Q+L+ ++ ++ LEEL + + + K+ K L+ L++
Sbjct: 772 LENSNKKIQQLESELQDLEMENQTLQKNLEEL-KISSKRLEQLEKENKSLEQETSQLEKD 830
Query: 65 KRHASREEAELVQQMAANIKE 85
K+ +E L QQ A IK+
Sbjct: 831 KKQLEKENKRLRQQ--AEIKD 849
>gi|71061468 centromere protein E [Homo sapiens]
Length = 2701
Score = 34.7 bits (78), Expect = 0.13
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 5/102 (4%)
Query: 2 SGQLERCEREWHELEGEFQELQETHRIYKQKLEELAALQTLCSSSISKQKKHLKDLKLTL 61
S L R E E L +FQE QE + ++ + L ++ + K+H+++ TL
Sbjct: 1320 STTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRE---TL 1376
Query: 62 QRCKRHASREEAELVQQMAANIKERQDVFFDMEAYLPKKNGL 103
+ + S++E L M E + +ME + PK + L
Sbjct: 1377 AKIQESQSKQEQSL--NMKEKDNETTKIVSEMEQFKPKDSAL 1416
>gi|49640011 tetratricopeptide repeat domain 3 [Homo sapiens]
Length = 2025
Score = 34.7 bits (78), Expect = 0.13
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Query: 3 GQLERCEREWHELEGEFQELQETHRIYKQK-LEELAALQTLCSSSISKQKKHLKDLKLTL 61
G++ R E+E L+ + QE+ E + K K LEE L+ + + K +L L
Sbjct: 1490 GEISRIEKEHQVLQDQLQEVYENYEQIKLKGLEETRDLEEKLKRHLEENKISKTELDWFL 1549
Query: 62 QRCKRHASR---EEAELVQQMAANIKERQDVFFDMEAYLPKKNG 102
Q +R + E+ E+ +++ + K+ + V E Y K +G
Sbjct: 1550 QDLEREIKKWQQEKKEIQERLKSLKKKIKKVSNASEMYTQKNDG 1593
>gi|49640009 tetratricopeptide repeat domain 3 [Homo sapiens]
Length = 2025
Score = 34.7 bits (78), Expect = 0.13
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Query: 3 GQLERCEREWHELEGEFQELQETHRIYKQK-LEELAALQTLCSSSISKQKKHLKDLKLTL 61
G++ R E+E L+ + QE+ E + K K LEE L+ + + K +L L
Sbjct: 1490 GEISRIEKEHQVLQDQLQEVYENYEQIKLKGLEETRDLEEKLKRHLEENKISKTELDWFL 1549
Query: 62 QRCKRHASR---EEAELVQQMAANIKERQDVFFDMEAYLPKKNG 102
Q +R + E+ E+ +++ + K+ + V E Y K +G
Sbjct: 1550 QDLEREIKKWQQEKKEIQERLKSLKKKIKKVSNASEMYTQKNDG 1593
>gi|149363685 hypothetical protein LOC23379 [Homo sapiens]
Length = 2266
Score = 34.3 bits (77), Expect = 0.16
Identities = 20/91 (21%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 5 LERCEREWHELEGEFQELQETHRIYKQKLEELAALQTLCSSSISKQKKHLKDLKLTLQRC 64
L++C+ E L+ E +E + + ++Y+ +E A ++ C S +++KK +K +
Sbjct: 85 LQKCQEELGSLKAELEEKKSSLKLYQDTHQEYARVKEECLKSDAQKKKLEAKVKKLQEAA 144
Query: 65 KRHAS-----REEAELVQQMAANIKERQDVF 90
+ R E +++++ +ER D F
Sbjct: 145 VKQTQDFKQLRNEKKILEKEFKKTQERLDEF 175
>gi|47519616 tropomyosin 2 (beta) isoform 2 [Homo sapiens]
Length = 284
Score = 34.3 bits (77), Expect = 0.16
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 1 MSGQLERCEREWHELEGEFQELQETHRIYKQKLEELAALQTLCSSSISKQKKHLKDLKLT 60
+ G+LER E E ++L+E R Q L+ L A + S +K+ K+ +++KL
Sbjct: 172 LEGELERSEERAEVAESRARQLEEELRTMDQALKSLMASEEEYS---TKEDKYEEEIKLL 228
Query: 61 LQRCKRHASREEAELVQQMAANIKERQD 88
++ K +R AE ++ A +++ D
Sbjct: 229 EEKLKEAETR--AEFAERSVAKLEKTID 254
>gi|224922812 tropomyosin 2 (beta) isoform 3 [Homo sapiens]
Length = 231
Score = 34.3 bits (77), Expect = 0.16
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 1 MSGQLERCEREWHELEGEFQELQETHRIYKQKLEELAALQTLCSSSISKQKKHLKDLKLT 60
+ G+LER E E ++L+E R Q L+ L A + S +K+ K+ +++KL
Sbjct: 119 LEGELERSEERAEVAESRARQLEEELRTMDQALKSLMASEEEYS---TKEDKYEEEIKLL 175
Query: 61 LQRCKRHASREEAELVQQMAANIKERQD 88
++ K +R AE ++ A +++ D
Sbjct: 176 EEKLKEAETR--AEFAERSVAKLEKTID 201
>gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens]
Length = 1976
Score = 34.3 bits (77), Expect = 0.16
Identities = 21/89 (23%), Positives = 43/89 (48%), Gaps = 10/89 (11%)
Query: 1 MSGQLERCEREWHELEGEFQELQETHRIYKQKLEELAALQTLCSSSISKQKKHLKDLKLT 60
+ Q+E + E+ + ++LQ + Y+++LEE A + + + +K LK L+
Sbjct: 1629 LEAQIEAANKARDEVIKQLRKLQAQMKDYQRELEEARASRDEIFAQSKESEKKLKSLEAE 1688
Query: 61 L----------QRCKRHASREEAELVQQM 79
+ +R +RHA +E EL ++
Sbjct: 1689 ILQLQEELASSERARRHAEQERDELADEI 1717
>gi|63252906 tropomyosin 1 alpha chain isoform 7 [Homo sapiens]
Length = 284
Score = 33.5 bits (75), Expect = 0.28
Identities = 24/101 (23%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 1 MSGQLERCEREWHELEGEFQELQETHRIYKQKLEELAALQTLCSSSISKQKKHLKDLKLT 60
+ LER E EG+ ++L+E RI Q L+ L A + S K+ ++ +++K+
Sbjct: 172 IESDLERAEERAELSEGQVRQLEEQLRIMDQTLKALMAAEDKYS---QKEDRYEEEIKVL 228
Query: 61 LQRCKRHASREEAELVQQMAANIKERQDVFFDMEAYLPKKN 101
+ K +R AE ++ +++ D + A+ ++N
Sbjct: 229 SDKLKEAETR--AEFAERSVTKLEKSIDDLEEKVAHAKEEN 267
>gi|63252900 tropomyosin 1 alpha chain isoform 4 [Homo sapiens]
Length = 284
Score = 33.5 bits (75), Expect = 0.28
Identities = 24/101 (23%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 1 MSGQLERCEREWHELEGEFQELQETHRIYKQKLEELAALQTLCSSSISKQKKHLKDLKLT 60
+ LER E EG+ ++L+E RI Q L+ L A + S K+ ++ +++K+
Sbjct: 172 IESDLERAEERAELSEGQVRQLEEQLRIMDQTLKALMAAEDKYS---QKEDRYEEEIKVL 228
Query: 61 LQRCKRHASREEAELVQQMAANIKERQDVFFDMEAYLPKKN 101
+ K +R AE ++ +++ D + A+ ++N
Sbjct: 229 SDKLKEAETR--AEFAERSVTKLEKSIDDLEEKVAHAKEEN 267
>gi|42476296 tropomyosin 2 (beta) isoform 1 [Homo sapiens]
Length = 284
Score = 33.1 bits (74), Expect = 0.36
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 1 MSGQLERCEREWHELEGEFQELQETHRIYKQKLEELAALQTLCSSSISKQKKHLKDLKLT 60
+ G+LER E E + +L+E +I L+ L A S +K+ K+ +++KL
Sbjct: 172 LEGELERSEERAEVAESKCGDLEEELKIVTNNLKSLEAQADKYS---TKEDKYEEEIKLL 228
Query: 61 LQRCKRHASREEAELVQQMAANIKERQDVFFDMEAYLPK 99
++ K +R AE ++ A +++ D D E Y K
Sbjct: 229 EEKLKEAETR--AEFAERSVAKLEKTIDDLED-EVYAQK 264
>gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens]
Length = 2003
Score = 32.7 bits (73), Expect = 0.48
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 1/107 (0%)
Query: 6 ERCEREWHELEGEFQELQETHRIYKQKLEELAALQTLCSSSISKQKKHLKDLKLTLQRCK 65
++ RE EL+G +L+E ++L A L + + ++L+L + +
Sbjct: 894 QQSAREVGELQGRVAQLEEERARLAEQLRAEAELCAEAEETRGRLAARKQELELVVSELE 953
Query: 66 RHASREEAELVQQMAANIKERQDVFFDMEAYLPKKNGLYLNLVLGNV 112
EE E +QM K Q ++EA+L + G L L V
Sbjct: 954 ARVGEEE-ECSRQMQTEKKRLQQHIQELEAHLEAEEGARQKLQLEKV 999
>gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens]
Length = 1995
Score = 32.7 bits (73), Expect = 0.48
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 1/107 (0%)
Query: 6 ERCEREWHELEGEFQELQETHRIYKQKLEELAALQTLCSSSISKQKKHLKDLKLTLQRCK 65
++ RE EL+G +L+E ++L A L + + ++L+L + +
Sbjct: 886 QQSAREVGELQGRVAQLEEERARLAEQLRAEAELCAEAEETRGRLAARKQELELVVSELE 945
Query: 66 RHASREEAELVQQMAANIKERQDVFFDMEAYLPKKNGLYLNLVLGNV 112
EE E +QM K Q ++EA+L + G L L V
Sbjct: 946 ARVGEEE-ECSRQMQTEKKRLQQHIQELEAHLEAEEGARQKLQLEKV 991
>gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens]
Length = 2036
Score = 32.7 bits (73), Expect = 0.48
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 1/107 (0%)
Query: 6 ERCEREWHELEGEFQELQETHRIYKQKLEELAALQTLCSSSISKQKKHLKDLKLTLQRCK 65
++ RE EL+G +L+E ++L A L + + ++L+L + +
Sbjct: 927 QQSAREVGELQGRVAQLEEERARLAEQLRAEAELCAEAEETRGRLAARKQELELVVSELE 986
Query: 66 RHASREEAELVQQMAANIKERQDVFFDMEAYLPKKNGLYLNLVLGNV 112
EE E +QM K Q ++EA+L + G L L V
Sbjct: 987 ARVGEEE-ECSRQMQTEKKRLQQHIQELEAHLEAEEGARQKLQLEKV 1032
>gi|27597085 tropomyosin 1 alpha chain isoform 5 [Homo sapiens]
Length = 284
Score = 32.7 bits (73), Expect = 0.48
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 1 MSGQLERCEREWHELEGEFQELQETHRIYKQKLEELAALQTLCSSSISKQKKHLKDLKLT 60
+ LER E EG+ ++L+E RI Q L+ L A + S + ++ +K L
Sbjct: 172 IESDLERAEERAELSEGQVRQLEEQLRIMDQTLKALMAAEDKYSQKEDRYEEEIKVLSDK 231
Query: 61 LQRCKRHASREEAELVQQMAANIKERQDVFF 91
L+ + A E V ++ +I + +D +
Sbjct: 232 LKEAETRAEFAERS-VTKLEKSIDDLEDELY 261
>gi|167555110 kinesin family member C1 [Homo sapiens]
Length = 673
Score = 32.7 bits (73), Expect = 0.48
Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 1 MSGQLERCEREWHELEGEFQELQETHRIYKQKLEELAALQTLCSSSISK-------QKKH 53
++ +L+RC L+ E Q+LQ+ R +Q+++ L +T ++K ++
Sbjct: 146 LNAELKRCRERTQTLDQENQQLQDQLRDAQQQVKALGTERTTLEGHLAKVQAQAEQGQQE 205
Query: 54 LKDLKLTLQRCKRHASREEAELVQQMAANIKERQD 88
LK+L+ + + S +E LVQ++ E Q+
Sbjct: 206 LKNLRACVLELEERLSTQEG-LVQELQKKQVELQE 239
>gi|73623035 sperm associated antigen 5 [Homo sapiens]
Length = 1193
Score = 32.7 bits (73), Expect = 0.48
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 16/130 (12%)
Query: 1 MSGQLERCEREWHELEGEFQELQETHRIYKQ-------KLEELAALQTLCSSSISKQKKH 53
+S QLE C+ + +LE E L R Q +L+EL + T C+ ++ + +
Sbjct: 697 VSAQLEECKGQTEQLELENSRLATDLRAQLQILANMDSQLKELQSQHTHCAQDLAMKDEL 756
Query: 54 LKDLKLTLQRCKRHASREE-------AELVQQMAANIKERQDVFFDMEAYLPKKNGLYLN 106
L L + + +EE AEL QQ A KE +D+ +E + ++N + +
Sbjct: 757 LCQLTQSNEEQAAQWQKEEMALKHMQAELQQQQAVLAKEVRDLKETLE-FADQENQV-AH 814
Query: 107 LVLGNVNVTL 116
L LG V L
Sbjct: 815 LELGQVECQL 824
>gi|33946313 ninein isoform 4 [Homo sapiens]
Length = 2096
Score = 32.7 bits (73), Expect = 0.48
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 5/94 (5%)
Query: 6 ERCEREWHELEG----EFQELQETHRIYKQKLE-ELAALQTLCSSSISKQKKHLKDLKLT 60
ERCE LEG E ++LQE R K + E E L C+ + K+ LK K T
Sbjct: 833 ERCESALQSLEGRYRQELKDLQEQQREEKSQWEFEKDELTQECAEAQELLKETLKREKTT 892
Query: 61 LQRCKRHASREEAELVQQMAANIKERQDVFFDME 94
+ E + + + + ERQ + D+E
Sbjct: 893 SLVLTQEREMLEKTYKEHLNSMVVERQQLLQDLE 926
>gi|33946321 ninein isoform 5 [Homo sapiens]
Length = 2090
Score = 32.7 bits (73), Expect = 0.48
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 5/94 (5%)
Query: 6 ERCEREWHELEG----EFQELQETHRIYKQKLE-ELAALQTLCSSSISKQKKHLKDLKLT 60
ERCE LEG E ++LQE R K + E E L C+ + K+ LK K T
Sbjct: 827 ERCESALQSLEGRYRQELKDLQEQQREEKSQWEFEKDELTQECAEAQELLKETLKREKTT 886
Query: 61 LQRCKRHASREEAELVQQMAANIKERQDVFFDME 94
+ E + + + + ERQ + D+E
Sbjct: 887 SLVLTQEREMLEKTYKEHLNSMVVERQQLLQDLE 920
>gi|148536871 ninein isoform 1 [Homo sapiens]
Length = 2046
Score = 32.7 bits (73), Expect = 0.48
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 5/94 (5%)
Query: 6 ERCEREWHELEG----EFQELQETHRIYKQKLE-ELAALQTLCSSSISKQKKHLKDLKLT 60
ERCE LEG E ++LQE R K + E E L C+ + K+ LK K T
Sbjct: 827 ERCESALQSLEGRYRQELKDLQEQQREEKSQWEFEKDELTQECAEAQELLKETLKREKTT 886
Query: 61 LQRCKRHASREEAELVQQMAANIKERQDVFFDME 94
+ E + + + + ERQ + D+E
Sbjct: 887 SLVLTQEREMLEKTYKEHLNSMVVERQQLLQDLE 920
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.327 0.139 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,103,984
Number of Sequences: 37866
Number of extensions: 506894
Number of successful extensions: 3040
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 128
Number of HSP's that attempted gapping in prelim test: 2714
Number of HSP's gapped (non-prelim): 463
length of query: 339
length of database: 18,247,518
effective HSP length: 103
effective length of query: 236
effective length of database: 14,347,320
effective search space: 3385967520
effective search space used: 3385967520
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.