NHLRC3 34241

Name: NHLRC3	Sequence: fasta or formatted (280aa)		NCBI GI: 62821785
Description: NHL repeat containing 3 isoform b		Not currently referenced in the text
Other entries for this name: alt prot {347aa} NHL repeat containing 3 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 20 2 C cysteine 1.8 5 1 D aspartate 5.0 14 1 E glutamate 3.9 11 2 F phenylalanine 6.4 18 2 G glycine 8.9 25 1 H histidine 2.1 6 1 I isoleucine 5.0 14 1 K lysine 3.6 10 1 L leucine 8.6 24 2 M methionine 0.7 2 1 N asparagine 3.9 11 2 P proline 5.0 14 2 Q glutamine 2.9 8 1 R arginine 4.6 13 1 S serine 6.8 19 2 T threonine 6.1 17 2 V valine 10.7 30 2 W tryptophan 3.2 9 1 Y tyrosine 3.6 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 NHL repeat containing 3 isoform b NHLRC3 0.878 NHL repeat containing 3 isoform a TRIM71 0.054 tripartite motif-containing 71 TRIM2 0.052 tripartite motif-containing 2 isoform 2 TRIM2 0.052 tripartite motif-containing 2 isoform 1 TRIM3 0.048 tripartite motif-containing 3 TRIM3 0.048 tripartite motif-containing 3 TRIM32 0.034 tripartite motif-containing 32 TRIM32 0.034 tripartite motif-containing 32 PAM 0.027 peptidylglycine alpha-amidating monooxygenase isofor... PAM 0.027 peptidylglycine alpha-amidating monooxygenase isofor... PAM 0.027 peptidylglycine alpha-amidating monooxygenase isofor... PAM 0.027 peptidylglycine alpha-amidating monooxygenase isofor... TRIM56 0.014 tripartite motif-containing 56 SUPT16H 0.013 chromatin-specific transcription elongation factor la... CNTNAP5 0.011 contactin associated protein-like 5 ODZ4 0.009 odz, odd Oz/ten-m homolog 4 WDR5 0.007 WD repeat domain 5 WDR5 0.007 WD repeat domain 5 WDR38 0.007 WD repeat domain 38 NHLRC1 0.005 NHL repeat containing 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.