Guide to the Human Genome
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Name: AGPAT9 Sequence: fasta or formatted (434aa) NCBI GI: 21362092
Description:

1-acylglycerol-3-phosphate O-acyltransferase 9

Referenced in:

Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         20           1
 C cysteine            2.1          9           2
 D aspartate           3.2         14           1
 E glutamate           6.0         26           2
 F phenylalanine       3.7         16           1
 G glycine             8.1         35           2
 H histidine           2.1          9           1
 I isoleucine          8.1         35           2
 K lysine              6.9         30           3
 L leucine            10.8         47           2
 M methionine          3.7         16           2
 N asparagine          3.5         15           2
 P proline             3.5         15           2
 Q glutamine           3.0         13           2
 R arginine            4.6         20           1
 S serine              7.4         32           2
 T threonine           5.5         24           2
 V valine              8.3         36           1
 W tryptophan          2.3         10           1
 Y tyrosine            2.8         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   1-acylglycerol-3-phosphate O-acyltransferase 9 [Homo... 
AGPAT6                0.694   lysophosphatidic acid acyltransferase zeta precursor...
LPCAT2                0.049   lysophosphatidylcholine acyltransferase 2 
LPCAT4                0.046   lysophosphatidylcholine acyltransferase 4 
LPCAT1                0.038   lysophosphatidylcholine acyltransferase 1 
AGPAT1                0.009   1-acylglycerol-3-phosphate O-acyltransferase 1 
AGPAT1                0.009   1-acylglycerol-3-phosphate O-acyltransferase 1 [Homo...
SLC15A2               0.008   peptide transporter 2 isoform a 
TSPAN12               0.007   transmembrane 4 superfamily member 12 
AGPAT2                0.006   1-acylglycerol-3-phosphate O-acyltransferase 2 isofor...
NDUFB11               0.006   NADH dehydrogenase (ubiquinone) 1 beta subcomplex, ...
PI4KA                 0.005   phosphatidylinositol 4-kinase type 3 alpha isoform ...
C22orf9               0.005   hypothetical protein LOC23313 isoform b 
C22orf9               0.005   hypothetical protein LOC23313 isoform a 
HDAC5                 0.005   histone deacetylase 5 isoform 3 
HDAC5                 0.005   histone deacetylase 5 isoform 1 
ELANE                 0.005   neutrophil elastase preproprotein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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