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Search of human proteins with 209529703
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|209529703 signal-regulatory protein beta 1 isoform 3
precursor [Homo sapiens]
(398 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|209529703 signal-regulatory protein beta 1 isoform 3 precurso... 807 0.0
gi|144953876 signal-regulatory protein beta 1 isoform 1 precurso... 712 0.0
gi|18426911 signal-regulatory protein alpha precursor [Homo sapi... 665 0.0
gi|91105767 signal-regulatory protein alpha precursor [Homo sapi... 665 0.0
gi|91105764 signal-regulatory protein alpha precursor [Homo sapi... 665 0.0
gi|94538335 signal-regulatory protein gamma isoform 1 precursor ... 627 e-180
gi|94538339 signal-regulatory protein gamma isoform 3 precursor ... 433 e-121
gi|144953878 signal-regulatory protein beta 1 isoform 2 precurso... 275 4e-74
gi|94538337 signal-regulatory protein gamma isoform 2 precursor ... 247 1e-65
gi|239751927 PREDICTED: similar to signal-regulatory protein bet... 225 5e-59
gi|169217521 PREDICTED: similar to signal-regulatory protein bet... 222 5e-58
gi|239751925 PREDICTED: similar to signal-regulatory protein alp... 177 2e-44
gi|239757417 PREDICTED: similar to hCG2019710 [Homo sapiens] 164 1e-40
gi|239751934 PREDICTED: hypothetical protein XP_002348043 [Homo ... 164 1e-40
gi|30425382 signal-regulatory protein delta [Homo sapiens] 141 9e-34
gi|239746419 PREDICTED: hypothetical protein XP_002344218 [Homo ... 117 2e-26
gi|198386341 signal-regulatory protein beta 2 isoform 2 [Homo sa... 100 2e-21
gi|171906611 signal-regulatory protein beta 2 isoform 1 [Homo sa... 97 2e-20
gi|187608363 cell adhesion molecule 3 isoform 2 [Homo sapiens] 67 2e-11
gi|11056046 cell adhesion molecule 3 isoform 1 [Homo sapiens] 66 5e-11
gi|54607031 immunoglobulin superfamily, member 4D [Homo sapiens] 62 9e-10
gi|229577039 butyrophilin-like 8 isoform 4 precursor [Homo sapiens] 54 2e-07
gi|94957742 butyrophilin-like 8 isoform 2 precursor [Homo sapiens] 54 2e-07
gi|13376271 butyrophilin-like 8 isoform 1 precursor [Homo sapiens] 54 2e-07
gi|239752604 PREDICTED: similar to immunoglobulin lambda-like po... 53 4e-07
gi|32699028 V-set and immunoglobulin domain containing 1 [Homo s... 53 6e-07
gi|4758822 nephrin precursor [Homo sapiens] 52 9e-07
gi|148664211 immunoglobulin superfamily, member 4D isoform 2 [Ho... 52 1e-06
gi|148664190 immunoglobulin superfamily, member 4D isoform 1 [Ho... 52 1e-06
gi|167857788 MHC class I polypeptide-related sequence B [Homo sa... 51 2e-06
>gi|209529703 signal-regulatory protein beta 1 isoform 3 precursor
[Homo sapiens]
Length = 398
Score = 807 bits (2085), Expect = 0.0
Identities = 398/398 (100%), Positives = 398/398 (100%)
Query: 1 MPVPASWPHLPSPFLLMTLLLGRLTGVAGEEELQVIQPDKSISVAAGESATLHCTVTSLI 60
MPVPASWPHLPSPFLLMTLLLGRLTGVAGEEELQVIQPDKSISVAAGESATLHCTVTSLI
Sbjct: 1 MPVPASWPHLPSPFLLMTLLLGRLTGVAGEEELQVIQPDKSISVAAGESATLHCTVTSLI 60
Query: 61 PVGPIQWFRGAGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISNITPADAGTYYC 120
PVGPIQWFRGAGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISNITPADAGTYYC
Sbjct: 61 PVGPIQWFRGAGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISNITPADAGTYYC 120
Query: 121 VKFRKGSPDHVEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDIT 180
VKFRKGSPDHVEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDIT
Sbjct: 121 VKFRKGSPDHVEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDIT 180
Query: 181 LKWFKNGNELSDFQTNVDPAGDSVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLR 240
LKWFKNGNELSDFQTNVDPAGDSVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLR
Sbjct: 181 LKWFKNGNELSDFQTNVDPAGDSVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLR 240
Query: 241 GTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETAST 300
GTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETAST
Sbjct: 241 GTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETAST 300
Query: 301 LTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNTA 360
LTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNTA
Sbjct: 301 LTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNTA 360
Query: 361 PGPALASAAPLLIAFLLGPKVLLVVGVSVIYVYWKQKA 398
PGPALASAAPLLIAFLLGPKVLLVVGVSVIYVYWKQKA
Sbjct: 361 PGPALASAAPLLIAFLLGPKVLLVVGVSVIYVYWKQKA 398
>gi|144953876 signal-regulatory protein beta 1 isoform 1 precursor
[Homo sapiens]
Length = 398
Score = 712 bits (1838), Expect = 0.0
Identities = 348/398 (87%), Positives = 367/398 (92%)
Query: 1 MPVPASWPHLPSPFLLMTLLLGRLTGVAGEEELQVIQPDKSISVAAGESATLHCTVTSLI 60
MPVPASWPHLPSPFLLMTLLLGRLTGVAGE+ELQVIQP+KS+SVAAGESATL C +TSLI
Sbjct: 1 MPVPASWPHLPSPFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLI 60
Query: 61 PVGPIQWFRGAGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISNITPADAGTYYC 120
PVGPI WFRGAG GRELIYNQKEGHFPRVTTVS+LTKRNN+DFSI ISNITPADAGTYYC
Sbjct: 61 PVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYC 120
Query: 121 VKFRKGSPDHVEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDIT 180
VKFRKGSPD VEFKSGAGTELSVRAKPSAPVVSGPA RATP+HTVSFTCESHGFSPRDIT
Sbjct: 121 VKFRKGSPDDVEFKSGAGTELSVRAKPSAPVVSGPAVRATPEHTVSFTCESHGFSPRDIT 180
Query: 181 LKWFKNGNELSDFQTNVDPAGDSVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLR 240
LKWFKNGNELSDFQTNVDPAGDSVSYSIHSTA+VVLTR DVHSQVICE+AH+TLQGDPLR
Sbjct: 181 LKWFKNGNELSDFQTNVDPAGDSVSYSIHSTARVVLTRGDVHSQVICEIAHITLQGDPLR 240
Query: 241 GTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETAST 300
GTANLSE IRVPPTLEVTQQP+RAENQ NVTCQV FYP+ LQLTWLENGNVSRTETAST
Sbjct: 241 GTANLSEAIRVPPTLEVTQQPMRAENQANVTCQVSNFYPRGLQLTWLENGNVSRTETAST 300
Query: 301 LTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNTA 360
L ENKDGTYNWMSWLLVN AHRDDV LTCQVEHDGQ AVSKS+ L++SAH KE GS+
Sbjct: 301 LIENKDGTYNWMSWLLVNTCAHRDDVVLTCQVEHDGQQAVSKSYALEISAHQKEHGSDIT 360
Query: 361 PGPALASAAPLLIAFLLGPKVLLVVGVSVIYVYWKQKA 398
ALA APLL+A LLGPK+LLVVGVS IY+ WKQKA
Sbjct: 361 HEAALAPTAPLLVALLLGPKLLLVVGVSAIYICWKQKA 398
>gi|18426911 signal-regulatory protein alpha precursor [Homo
sapiens]
Length = 504
Score = 665 bits (1716), Expect = 0.0
Identities = 325/336 (96%), Positives = 330/336 (98%)
Query: 25 TGVAGEEELQVIQPDKSISVAAGESATLHCTVTSLIPVGPIQWFRGAGPGRELIYNQKEG 84
+GVAGEEELQVIQPDKS+ VAAGE+ATL CT TSLIPVGPIQWFRGAGPGRELIYNQKEG
Sbjct: 26 SGVAGEEELQVIQPDKSVLVAAGETATLRCTATSLIPVGPIQWFRGAGPGRELIYNQKEG 85
Query: 85 HFPRVTTVSDLTKRNNMDFSIRISNITPADAGTYYCVKFRKGSPDHVEFKSGAGTELSVR 144
HFPRVTTVSDLTKRNNMDFSIRI NITPADAGTYYCVKFRKGSPD VEFKSGAGTELSVR
Sbjct: 86 HFPRVTTVSDLTKRNNMDFSIRIGNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 145
Query: 145 AKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPAGDSV 204
AKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDP G+SV
Sbjct: 146 AKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPVGESV 205
Query: 205 SYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQPVRA 264
SYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQPVRA
Sbjct: 206 SYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQPVRA 265
Query: 265 ENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTLTENKDGTYNWMSWLLVNVSAHRD 324
ENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETAST+TENKDGTYNWMSWLLVNVSAHRD
Sbjct: 266 ENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRD 325
Query: 325 DVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNTA 360
DVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNTA
Sbjct: 326 DVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNTA 361
>gi|91105767 signal-regulatory protein alpha precursor [Homo
sapiens]
Length = 504
Score = 665 bits (1716), Expect = 0.0
Identities = 325/336 (96%), Positives = 330/336 (98%)
Query: 25 TGVAGEEELQVIQPDKSISVAAGESATLHCTVTSLIPVGPIQWFRGAGPGRELIYNQKEG 84
+GVAGEEELQVIQPDKS+ VAAGE+ATL CT TSLIPVGPIQWFRGAGPGRELIYNQKEG
Sbjct: 26 SGVAGEEELQVIQPDKSVLVAAGETATLRCTATSLIPVGPIQWFRGAGPGRELIYNQKEG 85
Query: 85 HFPRVTTVSDLTKRNNMDFSIRISNITPADAGTYYCVKFRKGSPDHVEFKSGAGTELSVR 144
HFPRVTTVSDLTKRNNMDFSIRI NITPADAGTYYCVKFRKGSPD VEFKSGAGTELSVR
Sbjct: 86 HFPRVTTVSDLTKRNNMDFSIRIGNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 145
Query: 145 AKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPAGDSV 204
AKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDP G+SV
Sbjct: 146 AKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPVGESV 205
Query: 205 SYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQPVRA 264
SYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQPVRA
Sbjct: 206 SYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQPVRA 265
Query: 265 ENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTLTENKDGTYNWMSWLLVNVSAHRD 324
ENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETAST+TENKDGTYNWMSWLLVNVSAHRD
Sbjct: 266 ENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRD 325
Query: 325 DVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNTA 360
DVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNTA
Sbjct: 326 DVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNTA 361
>gi|91105764 signal-regulatory protein alpha precursor [Homo
sapiens]
Length = 504
Score = 665 bits (1716), Expect = 0.0
Identities = 325/336 (96%), Positives = 330/336 (98%)
Query: 25 TGVAGEEELQVIQPDKSISVAAGESATLHCTVTSLIPVGPIQWFRGAGPGRELIYNQKEG 84
+GVAGEEELQVIQPDKS+ VAAGE+ATL CT TSLIPVGPIQWFRGAGPGRELIYNQKEG
Sbjct: 26 SGVAGEEELQVIQPDKSVLVAAGETATLRCTATSLIPVGPIQWFRGAGPGRELIYNQKEG 85
Query: 85 HFPRVTTVSDLTKRNNMDFSIRISNITPADAGTYYCVKFRKGSPDHVEFKSGAGTELSVR 144
HFPRVTTVSDLTKRNNMDFSIRI NITPADAGTYYCVKFRKGSPD VEFKSGAGTELSVR
Sbjct: 86 HFPRVTTVSDLTKRNNMDFSIRIGNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 145
Query: 145 AKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPAGDSV 204
AKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDP G+SV
Sbjct: 146 AKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPVGESV 205
Query: 205 SYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQPVRA 264
SYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQPVRA
Sbjct: 206 SYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQPVRA 265
Query: 265 ENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTLTENKDGTYNWMSWLLVNVSAHRD 324
ENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETAST+TENKDGTYNWMSWLLVNVSAHRD
Sbjct: 266 ENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRD 325
Query: 325 DVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNTA 360
DVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNTA
Sbjct: 326 DVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNTA 361
>gi|94538335 signal-regulatory protein gamma isoform 1 precursor
[Homo sapiens]
Length = 387
Score = 627 bits (1618), Expect = e-180
Identities = 312/397 (78%), Positives = 338/397 (85%), Gaps = 11/397 (2%)
Query: 1 MPVPASWPHLPSPFLLMTLLLGRLTGVAGEEELQVIQPDKSISVAAGESATLHCTVTSLI 60
MPVPASWPH P PFLL+TLLLG LT VAGEEELQ+IQP+K + V G++ATLHCTVTSL+
Sbjct: 1 MPVPASWPHPPGPFLLLTLLLG-LTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLL 59
Query: 61 PVGPIQWFRGAGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISNITPADAGTYYC 120
PVGP+ WFRG GPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRIS+ITPAD GTYYC
Sbjct: 60 PVGPVLWFRGVGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYC 119
Query: 121 VKFRKGSPDHVEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDIT 180
VKFRKGSP++VEFKSG GTE+++ AKPSAPVV GPAAR TP+HTVSFTCESHGFSPRDIT
Sbjct: 120 VKFRKGSPENVEFKSGPGTEMALGAKPSAPVVLGPAARTTPEHTVSFTCESHGFSPRDIT 179
Query: 181 LKWFKNGNELSDFQTNVDPAGDSVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLR 240
LKWFKNGNELSDFQTNVDP G SV+YSI STA+VVL DV SQVICEVAHVTLQGDPLR
Sbjct: 180 LKWFKNGNELSDFQTNVDPTGQSVAYSIRSTARVVLDPWDVRSQVICEVAHVTLQGDPLR 239
Query: 241 GTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETAST 300
GTANLSE IRVPPTLEVTQQP+R NQVNVTCQVRKFYPQ LQLTW ENGNV + ETAST
Sbjct: 240 GTANLSEAIRVPPTLEVTQQPMRVGNQVNVTCQVRKFYPQSLQLTWSENGNVCQRETAST 299
Query: 301 LTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNTA 360
LTENKDGTYNW SW LVN+S RDDV LTCQV+HDGQ AVSK L+V+ H K+Q S+
Sbjct: 300 LTENKDGTYNWTSWFLVNISDQRDDVVLTCQVKHDGQLAVSKRLALEVTVHQKDQSSDAT 359
Query: 361 PGPALASAAPLLIAFLLGPKVLLVVGVSVIYVYWKQK 397
PGPA + A LLIA LLGP IYV WKQK
Sbjct: 360 PGPASSLTALLLIAVLLGP----------IYVPWKQK 386
>gi|94538339 signal-regulatory protein gamma isoform 3 precursor
[Homo sapiens]
Length = 276
Score = 433 bits (1114), Expect = e-121
Identities = 211/252 (83%), Positives = 228/252 (90%), Gaps = 1/252 (0%)
Query: 1 MPVPASWPHLPSPFLLMTLLLGRLTGVAGEEELQVIQPDKSISVAAGESATLHCTVTSLI 60
MPVPASWPH P PFLL+TLLLG LT VAGEEELQ+IQP+K + V G++ATLHCTVTSL+
Sbjct: 1 MPVPASWPHPPGPFLLLTLLLG-LTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLL 59
Query: 61 PVGPIQWFRGAGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISNITPADAGTYYC 120
PVGP+ WFRG GPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRIS+ITPAD GTYYC
Sbjct: 60 PVGPVLWFRGVGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYC 119
Query: 121 VKFRKGSPDHVEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDIT 180
VKFRKGSP++VEFKSG GTE+++ AKPSAPVV GPAAR TP+HTVSFTCESHGFSPRDIT
Sbjct: 120 VKFRKGSPENVEFKSGPGTEMALGAKPSAPVVLGPAARTTPEHTVSFTCESHGFSPRDIT 179
Query: 181 LKWFKNGNELSDFQTNVDPAGDSVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLR 240
LKWFKNGNELSDFQTNVDP G SV+YSI STA+VVL DV SQVICEVAHVTLQGDPLR
Sbjct: 180 LKWFKNGNELSDFQTNVDPTGQSVAYSIRSTARVVLDPWDVRSQVICEVAHVTLQGDPLR 239
Query: 241 GTANLSETIRVP 252
GTANLSE IR P
Sbjct: 240 GTANLSEAIRGP 251
Score = 45.8 bits (107), Expect = 7e-05
Identities = 39/133 (29%), Positives = 57/133 (42%), Gaps = 18/133 (13%)
Query: 265 ENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTLTENKDGTYNWMSWLLVNVSAHRD 324
E+ V+ TC+ F P+ + L W +NGN + + Y+ S V +
Sbjct: 161 EHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPTGQSVAYSIRSTARVVLDPWDV 220
Query: 325 DVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNTAPGPALASAAPLLIAFLLGPKVLLV 384
++ C+V H + L+ +A+ E GPA + A LLIA LLGP
Sbjct: 221 RSQVICEVAH----VTLQGDPLRGTANLSE----AIRGPASSLTALLLIAVLLGP----- 267
Query: 385 VGVSVIYVYWKQK 397
IYV WKQK
Sbjct: 268 -----IYVPWKQK 275
>gi|144953878 signal-regulatory protein beta 1 isoform 2 precursor
[Homo sapiens]
Length = 181
Score = 275 bits (704), Expect = 4e-74
Identities = 134/150 (89%), Positives = 140/150 (93%)
Query: 1 MPVPASWPHLPSPFLLMTLLLGRLTGVAGEEELQVIQPDKSISVAAGESATLHCTVTSLI 60
MPVPASWPHLPSPFLLMTLLLGRLTGVAGE+ELQVIQP+KS+SVAAGESATL C +TSLI
Sbjct: 1 MPVPASWPHLPSPFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLI 60
Query: 61 PVGPIQWFRGAGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISNITPADAGTYYC 120
PVGPI WFRGAG GRELIYNQKEGHFPRVTTVS+LTKRNN+DFSI ISNITPADAGTYYC
Sbjct: 61 PVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYC 120
Query: 121 VKFRKGSPDHVEFKSGAGTELSVRAKPSAP 150
VKFRKGSPD VEFKSGAGTELSVR AP
Sbjct: 121 VKFRKGSPDDVEFKSGAGTELSVREAALAP 150
Score = 57.0 bits (136), Expect = 3e-08
Identities = 27/35 (77%), Positives = 30/35 (85%)
Query: 364 ALASAAPLLIAFLLGPKVLLVVGVSVIYVYWKQKA 398
ALA APLL+A LLGPK+LLVVGVS IY+ WKQKA
Sbjct: 147 ALAPTAPLLVALLLGPKLLLVVGVSAIYICWKQKA 181
>gi|94538337 signal-regulatory protein gamma isoform 2 precursor
[Homo sapiens]
Length = 170
Score = 247 bits (631), Expect = 1e-65
Identities = 118/149 (79%), Positives = 133/149 (89%), Gaps = 1/149 (0%)
Query: 1 MPVPASWPHLPSPFLLMTLLLGRLTGVAGEEELQVIQPDKSISVAAGESATLHCTVTSLI 60
MPVPASWPH P PFLL+TLLLG LT VAGEEELQ+IQP+K + V G++ATLHCTVTSL+
Sbjct: 1 MPVPASWPHPPGPFLLLTLLLG-LTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLL 59
Query: 61 PVGPIQWFRGAGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISNITPADAGTYYC 120
PVGP+ WFRG GPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRIS+ITPAD GTYYC
Sbjct: 60 PVGPVLWFRGVGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYC 119
Query: 121 VKFRKGSPDHVEFKSGAGTELSVRAKPSA 149
VKFRKGSP++VEFKSG GTE+++ S+
Sbjct: 120 VKFRKGSPENVEFKSGPGTEMALGGPASS 148
Score = 30.8 bits (68), Expect = 2.2
Identities = 19/36 (52%), Positives = 20/36 (55%), Gaps = 10/36 (27%)
Query: 362 GPALASAAPLLIAFLLGPKVLLVVGVSVIYVYWKQK 397
GPA + A LLIA LLGP IYV WKQK
Sbjct: 144 GPASSLTALLLIAVLLGP----------IYVPWKQK 169
>gi|239751927 PREDICTED: similar to signal-regulatory protein beta 1
[Homo sapiens]
Length = 136
Score = 225 bits (574), Expect = 5e-59
Identities = 109/123 (88%), Positives = 116/123 (94%)
Query: 26 GVAGEEELQVIQPDKSISVAAGESATLHCTVTSLIPVGPIQWFRGAGPGRELIYNQKEGH 85
GVAGE+ELQVIQP+KS+SVAAGESATL C +TSLIPVGPI WFRGAG GRELIYNQKEGH
Sbjct: 9 GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH 68
Query: 86 FPRVTTVSDLTKRNNMDFSIRISNITPADAGTYYCVKFRKGSPDHVEFKSGAGTELSVRA 145
FPRVTTVS+LTKRNN+DFSI ISNITPADAGTYYCVKFRKGSPD VEFKSGAGTELSVRA
Sbjct: 69 FPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRA 128
Query: 146 KPS 148
P+
Sbjct: 129 DPA 131
>gi|169217521 PREDICTED: similar to signal-regulatory protein beta 1
[Homo sapiens]
Length = 160
Score = 222 bits (565), Expect = 5e-58
Identities = 108/123 (87%), Positives = 115/123 (93%)
Query: 26 GVAGEEELQVIQPDKSISVAAGESATLHCTVTSLIPVGPIQWFRGAGPGRELIYNQKEGH 85
GVAGE+ELQVIQP+KS+SVAAGESATL C +TSLIPVGPI WFRGAG GRELIYNQKEGH
Sbjct: 9 GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH 68
Query: 86 FPRVTTVSDLTKRNNMDFSIRISNITPADAGTYYCVKFRKGSPDHVEFKSGAGTELSVRA 145
FPRVTTVS+LTKRNN+DFSI ISNITPADAGTYYCVKFRKGSPD VEFKSGAGTELSVR
Sbjct: 69 FPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRG 128
Query: 146 KPS 148
+ S
Sbjct: 129 EYS 131
>gi|239751925 PREDICTED: similar to signal-regulatory protein alpha
[Homo sapiens]
Length = 87
Score = 177 bits (448), Expect = 2e-44
Identities = 87/87 (100%), Positives = 87/87 (100%)
Query: 312 MSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNTAPGPALASAAPL 371
MSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNTAPGPALASAAPL
Sbjct: 1 MSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNTAPGPALASAAPL 60
Query: 372 LIAFLLGPKVLLVVGVSVIYVYWKQKA 398
LIAFLLGPKVLLVVGVSVIYVYWKQKA
Sbjct: 61 LIAFLLGPKVLLVVGVSVIYVYWKQKA 87
>gi|239757417 PREDICTED: similar to hCG2019710 [Homo sapiens]
Length = 651
Score = 164 bits (416), Expect = 1e-40
Identities = 82/118 (69%), Positives = 98/118 (83%), Gaps = 1/118 (0%)
Query: 27 VAGEEELQVIQPDKSISVAAGESATLHCTVTSLIPVGPIQWFRGAGPGRELIYNQKEGHF 86
VAGEE LQVIQP+ +SVAAGE ATL+CTVTSL+PVGPIQWFRGA PG++LIY+ K H
Sbjct: 510 VAGEE-LQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQKLIYSPKRCHS 568
Query: 87 PRVTTVSDLTKRNNMDFSIRISNITPADAGTYYCVKFRKGSPDHVEFKSGAGTELSVR 144
PRVTT+SD KRN+ D+SIRIS+IT DAGTYYC+K R+ P +VE KSG GT++SVR
Sbjct: 569 PRVTTISDQRKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEIKSGPGTQMSVR 626
Score = 115 bits (289), Expect = 5e-26
Identities = 62/119 (52%), Positives = 75/119 (63%), Gaps = 27/119 (22%)
Query: 25 TGVAGEEELQVIQPDKSISVAAGESATLHCTVTSLIPVGPIQWFRGAGPGRELIYNQKEG 84
TG AGEEELQVIQP+K WF+G G+ELIY+ K G
Sbjct: 416 TGAAGEEELQVIQPEK--------------------------WFKGTETGQELIYSSKGG 449
Query: 85 HFPRVTTVSDLTKRNNMDFSIRISNITPADAGTYYCVKFRKGSPDHVEFKSGAGTELSV 143
HFP++ +SD+TKRNN DFS+ I++IT A+ GTY CVKF KG PD +E KSG GTELSV
Sbjct: 450 HFPKIACISDITKRNNTDFSMCITSITRANTGTYNCVKFWKGGPD-MELKSGPGTELSV 507
Score = 107 bits (267), Expect = 2e-23
Identities = 77/237 (32%), Positives = 109/237 (45%), Gaps = 30/237 (12%)
Query: 152 VSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPAGDSVSYSIHST 211
+ GP R+ P + T S GFS +T+ W KN +EL + QT+V +G +Y++ S+
Sbjct: 188 LQGPLQRSEPGTRIRLTYASSGFSTHQVTVTWLKNKHELPNPQTSVQYSGH--TYNVTSS 245
Query: 212 AKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTL-----------EVTQQ 260
V L +DV S V+C V H + T L + +R P T+ T
Sbjct: 246 VLVPLMDDDVFSHVVCHVEHKLTWF--FQKTTGLDQYLREPMTVVWRAPYPALFSTGTTP 303
Query: 261 PVRAENQ-------------VNVTCQVRKFYPQRLQLTWLENGNVSRTETASTLTENKDG 307
RA V VTC V++FYPQ + L WLE+ + + TL +N D
Sbjct: 304 VTRASTPGVFHSQVLLFSCLVAVTCLVQRFYPQNVHLAWLEDCHTLKGTEQPTLKKNNDR 363
Query: 308 TYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHP--KEQGSNTAPG 362
+Y LLVN S + LTC +EH+GQP + L +AH K GS A G
Sbjct: 364 SYTLEKLLLVNASVQGPERVLTCMMEHEGQPPKRANLVLSTAAHTAYKPIGSTGAAG 420
Score = 60.1 bits (144), Expect = 3e-09
Identities = 43/130 (33%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 152 VSGPAARATPQHTVSFTCESHGFSP----RDITLKWFKNGNELSDFQTNVDPAGDSVSYS 207
++GP+ R +P +V F C + F+ RD + W K+ +E + P +
Sbjct: 29 LTGPSHRTSPGDSVPFNCTAVPFNSQDFSRDFNVTWLKDSDEHPASAQRLVPDNGGNDF- 87
Query: 208 IHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPP---TLEVTQQPVRA 264
I S A V LTR+DV S++ CEV H L +PL+ T NLS+ R P +LE T Q
Sbjct: 88 ITSKAWVTLTRQDVSSEITCEVTHRAL-AEPLKTTMNLSQATRNPDGTYSLEHTWQAEAT 146
Query: 265 ENQVNVTCQV 274
+ C V
Sbjct: 147 LEEREFACWV 156
Score = 31.6 bits (70), Expect = 1.3
Identities = 16/23 (69%), Positives = 18/23 (78%)
Query: 376 LLGPKVLLVVGVSVIYVYWKQKA 398
LLG KVLL+V VS YV+ KQKA
Sbjct: 629 LLGSKVLLLVDVSAAYVHRKQKA 651
>gi|239751934 PREDICTED: hypothetical protein XP_002348043 [Homo
sapiens]
Length = 651
Score = 164 bits (416), Expect = 1e-40
Identities = 82/118 (69%), Positives = 98/118 (83%), Gaps = 1/118 (0%)
Query: 27 VAGEEELQVIQPDKSISVAAGESATLHCTVTSLIPVGPIQWFRGAGPGRELIYNQKEGHF 86
VAGEE LQVIQP+ +SVAAGE ATL+CTVTSL+PVGPIQWFRGA PG++LIY+ K H
Sbjct: 510 VAGEE-LQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQKLIYSPKRCHS 568
Query: 87 PRVTTVSDLTKRNNMDFSIRISNITPADAGTYYCVKFRKGSPDHVEFKSGAGTELSVR 144
PRVTT+SD KRN+ D+SIRIS+IT DAGTYYC+K R+ P +VE KSG GT++SVR
Sbjct: 569 PRVTTISDQRKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEIKSGPGTQMSVR 626
Score = 115 bits (289), Expect = 5e-26
Identities = 62/119 (52%), Positives = 75/119 (63%), Gaps = 27/119 (22%)
Query: 25 TGVAGEEELQVIQPDKSISVAAGESATLHCTVTSLIPVGPIQWFRGAGPGRELIYNQKEG 84
TG AGEEELQVIQP+K WF+G G+ELIY+ K G
Sbjct: 416 TGAAGEEELQVIQPEK--------------------------WFKGTETGQELIYSSKGG 449
Query: 85 HFPRVTTVSDLTKRNNMDFSIRISNITPADAGTYYCVKFRKGSPDHVEFKSGAGTELSV 143
HFP++ +SD+TKRNN DFS+ I++IT A+ GTY CVKF KG PD +E KSG GTELSV
Sbjct: 450 HFPKIACISDITKRNNTDFSMCITSITRANTGTYNCVKFWKGGPD-MELKSGPGTELSV 507
Score = 107 bits (267), Expect = 2e-23
Identities = 77/237 (32%), Positives = 109/237 (45%), Gaps = 30/237 (12%)
Query: 152 VSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPAGDSVSYSIHST 211
+ GP R+ P + T S GFS +T+ W KN +EL + QT+V +G +Y++ S+
Sbjct: 188 LQGPLQRSEPGTRIRLTYASSGFSTHQVTVTWLKNKHELPNPQTSVQYSGH--TYNVTSS 245
Query: 212 AKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTL-----------EVTQQ 260
V L +DV S V+C V H + T L + +R P T+ T
Sbjct: 246 VLVPLMDDDVFSHVVCHVEHKLTWF--FQKTTGLDQYLREPMTVVWRAPYPALFSTGTTP 303
Query: 261 PVRAENQ-------------VNVTCQVRKFYPQRLQLTWLENGNVSRTETASTLTENKDG 307
RA V VTC V++FYPQ + L WLE+ + + TL +N D
Sbjct: 304 VTRASTPGVFHSQVLLFSCLVAVTCLVQRFYPQNVHLAWLEDCHTLKGTEQPTLKKNNDR 363
Query: 308 TYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHP--KEQGSNTAPG 362
+Y LLVN S + LTC +EH+GQP + L +AH K GS A G
Sbjct: 364 SYTLEKLLLVNASVQGPERVLTCMMEHEGQPPKRANLVLSTAAHTAYKPIGSTGAAG 420
Score = 60.1 bits (144), Expect = 3e-09
Identities = 43/130 (33%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 152 VSGPAARATPQHTVSFTCESHGFSP----RDITLKWFKNGNELSDFQTNVDPAGDSVSYS 207
++GP+ R +P +V F C + F+ RD + W K+ +E + P +
Sbjct: 29 LTGPSHRTSPGDSVPFNCTAVPFNSQDFSRDFNVTWLKDSDEHPASAQRLVPDNGGNDF- 87
Query: 208 IHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPP---TLEVTQQPVRA 264
I S A V LTR+DV S++ CEV H L +PL+ T NLS+ R P +LE T Q
Sbjct: 88 ITSKAWVTLTRQDVSSEITCEVTHRAL-AEPLKTTMNLSQATRNPDGTYSLEHTWQAEAT 146
Query: 265 ENQVNVTCQV 274
+ C V
Sbjct: 147 LEEREFACWV 156
Score = 31.6 bits (70), Expect = 1.3
Identities = 16/23 (69%), Positives = 18/23 (78%)
Query: 376 LLGPKVLLVVGVSVIYVYWKQKA 398
LLG KVLL+V VS YV+ KQKA
Sbjct: 629 LLGSKVLLLVDVSAAYVHRKQKA 651
>gi|30425382 signal-regulatory protein delta [Homo sapiens]
Length = 197
Score = 141 bits (356), Expect = 9e-34
Identities = 83/172 (48%), Positives = 106/172 (61%), Gaps = 5/172 (2%)
Query: 1 MPVPASWPHLPSPFLLMTLLLGRLTGVAGEEELQVIQPDKSISVAAGESATLHCTVTSLI 60
MP+PAS H P P LL+ LLL L GV +Q Q + S +V+ GES L C+V +
Sbjct: 1 MPIPASPLHPPLPSLLLYLLL-ELAGVTHVFHVQ--QTEMSQTVSTGESIILSCSVPDTL 57
Query: 61 PVGPIQWFRGAGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISNITPADAGTYYC 120
P GP+ WF+G GP R+LIYN K+G+FPRV + D TK N DFS RI I+ ADAGTYYC
Sbjct: 58 PNGPVLWFKGTGPNRKLIYNFKQGNFPRVKEIGDTTKPGNTDFSTRIREISLADAGTYYC 117
Query: 121 VKFRKGSPDHVEFKSGAGTELSVRAKPSAPVVSGPAARA-TPQHTVSFTCES 171
VKF KG E++SG GT++ V + P + PA RA + H + TC S
Sbjct: 118 VKFIKGRAIK-EYQSGRGTQVFVTEQNPRPPKNRPAGRAGSRAHHDAHTCLS 168
>gi|239746419 PREDICTED: hypothetical protein XP_002344218 [Homo
sapiens]
Length = 532
Score = 117 bits (292), Expect = 2e-26
Identities = 63/131 (48%), Positives = 81/131 (61%), Gaps = 27/131 (20%)
Query: 25 TGVAGEEELQVIQPDKSISVAAGESATLHCTVTSLIPVGPIQWFRGAGPGRELIYNQKEG 84
TG AGEEEL+VIQP+K WF+G G+ELIY+ K G
Sbjct: 416 TGAAGEEELRVIQPEK--------------------------WFKGTETGQELIYSSKGG 449
Query: 85 HFPRVTTVSDLTKRNNMDFSIRISNITPADAGTYYCVKFRKGSPDHVEFKSGAGTELSVR 144
HFP++ +SD+TKRNN DFS+ I++IT A+ GTY CVKF KG PD +E KSG GTELSV
Sbjct: 450 HFPKIACISDITKRNNTDFSMCITSITRANTGTYNCVKFWKGGPD-MELKSGPGTELSVH 508
Query: 145 AKPSAPVVSGP 155
++ S ++ P
Sbjct: 509 SEYSVGLLRPP 519
Score = 105 bits (263), Expect = 5e-23
Identities = 76/237 (32%), Positives = 109/237 (45%), Gaps = 30/237 (12%)
Query: 152 VSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPAGDSVSYSIHST 211
+ GP R+ P + T S GFS +T+ W KN +EL + QT+V +G +Y++ S+
Sbjct: 188 LQGPLQRSEPGTRIRLTYASSGFSTHQVTVTWLKNKHELPNPQTSVQYSGH--TYNVTSS 245
Query: 212 AKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTL-----------EVTQQ 260
V L +DV S V+C V H + T L + ++ P T+ T
Sbjct: 246 VLVPLMDDDVFSHVVCHVEHKLTWF--FQKTTGLDQYLQEPMTVVWRAPYPALFSTGTTP 303
Query: 261 PVRAENQ-------------VNVTCQVRKFYPQRLQLTWLENGNVSRTETASTLTENKDG 307
RA V VTC V++FYPQ + L WLE+ + + TL +N D
Sbjct: 304 VTRASTPGVFHSQVLLFSCLVAVTCLVQRFYPQNVHLAWLEDCHTLKGTEQPTLKKNNDR 363
Query: 308 TYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHP--KEQGSNTAPG 362
+Y LLVN S + LTC +EH+GQP + L +AH K GS A G
Sbjct: 364 SYTLEKLLLVNASVQGPERVLTCMMEHEGQPPKRANLVLSTAAHTAYKPIGSTGAAG 420
Score = 60.1 bits (144), Expect = 3e-09
Identities = 43/130 (33%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 152 VSGPAARATPQHTVSFTCESHGFSP----RDITLKWFKNGNELSDFQTNVDPAGDSVSYS 207
++GP+ R +P +V F C + F+ RD + W K+ +E + P +
Sbjct: 29 LTGPSHRTSPGDSVPFNCTAVPFNSQDFSRDFNVTWLKDSDEHPASAQRLVPDNGGNDF- 87
Query: 208 IHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPP---TLEVTQQPVRA 264
I S A V LTR+DV S++ CEV H L +PL+ T NLS+ R P +LE T Q
Sbjct: 88 ITSKAWVTLTRQDVSSEITCEVTHRAL-AEPLKTTMNLSQATRNPDGTYSLEHTWQAEAT 146
Query: 265 ENQVNVTCQV 274
+ C V
Sbjct: 147 LEEREFACWV 156
>gi|198386341 signal-regulatory protein beta 2 isoform 2 [Homo
sapiens]
Length = 244
Score = 100 bits (250), Expect = 2e-21
Identities = 69/189 (36%), Positives = 96/189 (50%), Gaps = 34/189 (17%)
Query: 1 MPVPASWPHLPSPFLLMTLLL--GRLTGVAGEEELQVIQPDKSISVA------------- 45
M P HLP FLL+ L+L +G + + QV+QP+ + VA
Sbjct: 5 MSAPTCLAHLPPCFLLLALVLVPSDASGQSSRNDWQVLQPEGPMLVAEGAGDPEPDLWII 64
Query: 46 ---------AGESATLHCTVTSLIPVGPIQWFRGAGPGRELIYNQKEGHFPRVTTVSDLT 96
G++ L+CTV P GPI+WF+GAG RE IYN P+ T V
Sbjct: 65 QPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETAV---- 120
Query: 97 KRNNMDFSIRISNITPADAGTYYCVKFRKGSPDHVEFKSGAGTELSVRAKPS----APVV 152
+ +N DFSI + N++ DAGTYYCVKF++ P+ ++ SG GT L V+AK + A
Sbjct: 121 QASNNDFSILLQNVSSEDAGTYYCVKFQR-KPNR-QYLSGQGTSLKVKAKSTSSKEAEFT 178
Query: 153 SGPAARATP 161
S PA +P
Sbjct: 179 SEPATEMSP 187
>gi|171906611 signal-regulatory protein beta 2 isoform 1 [Homo
sapiens]
Length = 342
Score = 97.4 bits (241), Expect = 2e-20
Identities = 57/136 (41%), Positives = 80/136 (58%), Gaps = 10/136 (7%)
Query: 30 EEELQVIQPDKSISVAAGESATLHCTVTSLIPVGPIQWFRGAGPGRELIYNQKEGHFPRV 89
E +L +IQP + + G++ L+CTV P GPI+WF+GAG RE IYN P+
Sbjct: 156 EPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKE 215
Query: 90 TTVSDLTKRNNMDFSIRISNITPADAGTYYCVKFRKGSPDHVEFKSGAGTELSVRAKPS- 148
T V + +N DFSI + N++ DAGTYYCVKF++ P+ ++ SG GT L V+AK +
Sbjct: 216 TAV----QASNNDFSILLQNVSSEDAGTYYCVKFQR-KPNR-QYLSGQGTSLKVKAKSTS 269
Query: 149 ---APVVSGPAARATP 161
A S PA +P
Sbjct: 270 SKEAEFTSEPATEMSP 285
Score = 92.0 bits (227), Expect = 8e-19
Identities = 64/193 (33%), Positives = 92/193 (47%), Gaps = 10/193 (5%)
Query: 1 MPVPASWPHLPSPFLLMTLLL--GRLTGVAGEEELQVIQPDKSISVAAGESATLHCTVTS 58
M P HLP FLL+ L+L +G + + QV+QP+ + VA GE+ L C V
Sbjct: 5 MSAPTCLAHLPPCFLLLALVLVPSDASGQSSRNDWQVLQPEGPMLVAEGETLLLRCMVVG 64
Query: 59 LIPVGPIQWFRGAGPGRELIYNQKEGHFPRVTTVSDLTKRN-NMDFSIRISNITPADAGT 117
G I+W + + ++ IYN K G FP V + T N D+SI I N+T GT
Sbjct: 65 SCTDGMIKWVKVSTQDQQEIYNFKRGSFPGVMPMIQRTSEPLNCDYSIYIHNVTREHTGT 124
Query: 118 YYCVKFRKGSPDHVEFKSGAGTELSVRA----KPSAPVVS-GPAARATPQHTVSFTCESH 172
Y+CV+F G +H E KS GT + V+ +P ++ T TV C
Sbjct: 125 YHCVRF-DGLSEHSEMKSDEGTSVLVKGAGDPEPDLWIIQPQELVLGTTGDTVFLNCTVL 183
Query: 173 GFSPRDITLKWFK 185
G P ++WF+
Sbjct: 184 GDGPPG-PIRWFQ 195
>gi|187608363 cell adhesion molecule 3 isoform 2 [Homo sapiens]
Length = 398
Score = 67.4 bits (163), Expect = 2e-11
Identities = 72/285 (25%), Positives = 118/285 (41%), Gaps = 18/285 (6%)
Query: 11 PSPFLLMTLLLGRLTGVAGEEELQV--IQPDKSI-SVAAGESATLHCTVTSLIPVGPIQW 67
P+ LL+ LLL G L QP S +V AG + L C V +QW
Sbjct: 4 PAASLLLLLLLFACCWAPGGANLSQDDSQPWTSDETVVAGGTVVLKCQVKDHED-SSLQW 62
Query: 68 FRGAGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISNITPADAGTYYCVKFRKGS 127
+ P ++ +Y ++ R + +T + + SI ISN+ AD G Y C F
Sbjct: 63 ---SNPAQQTLYFGEKRAL-RDNRIQLVTSTPH-ELSISISNVALADEGEYTCSIFTMPV 117
Query: 128 PDHVEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNG 187
A + ++V P P+++G + + T + C+S G P L W K
Sbjct: 118 RT-------AKSLVTVLGIPQKPIITGYKSSLREKDTATLNCQSSGSKPA-ARLTWRKGD 169
Query: 188 NELSDFQTNVDPAGDSVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSE 247
EL T + + ++++ S+ +TRED + ++C V H +L+G R T+ E
Sbjct: 170 QELHGEPTRIQEDPNGKTFTVSSSVTFQVTREDDGASIVCSVNHESLKGAD-RSTSQRIE 228
Query: 248 TIRVPPTLEVTQQPVRAENQVNVTCQVRKFYPQRLQLTWLENGNV 292
+ P + P E Q + + P Q W + G+V
Sbjct: 229 VLYTPTAMIRPDPPHPREGQKLLLHCEGRGNPVPQQYLWEKEGSV 273
Score = 29.6 bits (65), Expect = 5.0
Identities = 21/113 (18%), Positives = 42/113 (37%), Gaps = 3/113 (2%)
Query: 238 PLRGTANLSETIRVP--PTLEVTQQPVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRT 295
P+R +L + +P P + + +R ++ + CQ P +LTW +
Sbjct: 116 PVRTAKSLVTVLGIPQKPIITGYKSSLREKDTATLNCQSSGSKPAA-RLTWRKGDQELHG 174
Query: 296 ETASTLTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKV 348
E + T+ S + V+ D + C V H+ +S ++
Sbjct: 175 EPTRIQEDPNGKTFTVSSSVTFQVTREDDGASIVCSVNHESLKGADRSTSQRI 227
>gi|11056046 cell adhesion molecule 3 isoform 1 [Homo sapiens]
Length = 432
Score = 66.2 bits (160), Expect = 5e-11
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 15/250 (6%)
Query: 43 SVAAGESATLHCTVTSLIPVGPIQWFRGAGPGRELIYNQKEGHFPRVTTVSDLTKRNNMD 102
+V AG + L C V +QW + P ++ +Y ++ R + +T + +
Sbjct: 73 TVVAGGTVVLKCQVKDHED-SSLQW---SNPAQQTLYFGEKRAL-RDNRIQLVTSTPH-E 126
Query: 103 FSIRISNITPADAGTYYCVKFRKGSPDHVEFKSGAGTELSVRAKPSAPVVSGPAARATPQ 162
SI ISN+ AD G Y C F A + ++V P P+++G + +
Sbjct: 127 LSISISNVALADEGEYTCSIFTMPVRT-------AKSLVTVLGIPQKPIITGYKSSLREK 179
Query: 163 HTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPAGDSVSYSIHSTAKVVLTREDVH 222
T + C+S G P L W K EL T + + ++++ S+ +TRED
Sbjct: 180 DTATLNCQSSGSKPA-ARLTWRKGDQELHGEPTRIQEDPNGKTFTVSSSVTFQVTREDDG 238
Query: 223 SQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKFYPQRL 282
+ ++C V H +L+G R T+ E + P + P E Q + + P
Sbjct: 239 ASIVCSVNHESLKGAD-RSTSQRIEVLYTPTAMIRPDPPHPREGQKLLLHCEGRGNPVPQ 297
Query: 283 QLTWLENGNV 292
Q W + G+V
Sbjct: 298 QYLWEKEGSV 307
Score = 29.6 bits (65), Expect = 5.0
Identities = 21/113 (18%), Positives = 42/113 (37%), Gaps = 3/113 (2%)
Query: 238 PLRGTANLSETIRVP--PTLEVTQQPVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRT 295
P+R +L + +P P + + +R ++ + CQ P +LTW +
Sbjct: 150 PVRTAKSLVTVLGIPQKPIITGYKSSLREKDTATLNCQSSGSKPAA-RLTWRKGDQELHG 208
Query: 296 ETASTLTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKV 348
E + T+ S + V+ D + C V H+ +S ++
Sbjct: 209 EPTRIQEDPNGKTFTVSSSVTFQVTREDDGASIVCSVNHESLKGADRSTSQRI 261
>gi|54607031 immunoglobulin superfamily, member 4D [Homo sapiens]
Length = 437
Score = 62.0 bits (149), Expect = 9e-10
Identities = 57/253 (22%), Positives = 106/253 (41%), Gaps = 19/253 (7%)
Query: 40 KSISVAAGESATLHCTVTSLIPVGPIQWFRGAGPGRELIY--NQKEGHFPRVTTVSDLTK 97
++++V G +A L C V +QW + P ++ +Y ++K R+ +L +
Sbjct: 32 QNVTVVEGGTAILTCRVDQNDNTS-LQW---SNPAQQTLYFDDKKALRDNRI----ELVR 83
Query: 98 RNNMDFSIRISNITPADAGTYYCVKFRKGSPDHVEFKSGAGTELSVRAKPSAPVVSGPAA 157
+ + SI +S+++ +D G Y C F + L+V P P +SG ++
Sbjct: 84 ASWHELSISVSDVSLSDEGQYTCSLFTMPVKTSKAY-------LTVLGVPEKPQISGFSS 136
Query: 158 RATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPAGDSVSYSIHSTAKVVLT 217
+ TC++ G P ++WFKN E+ D + + + ++++ ST +
Sbjct: 137 PVMEGDLMQLTCKTSGSKPA-ADIRWFKNDKEIKDVKYLKEEDANRKTFTVSSTLDFRVD 195
Query: 218 REDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKF 277
R D VIC V H +L P + + E P + P E Q + K
Sbjct: 196 RSDDGVAVICRVDHESLNATP-QVAMQVLEIHYTPSVKIIPSTPFPQEGQPLILTCESKG 254
Query: 278 YPQRLQLTWLENG 290
P + W ++G
Sbjct: 255 KPLPEPVLWTKDG 267
>gi|229577039 butyrophilin-like 8 isoform 4 precursor [Homo sapiens]
Length = 340
Score = 53.9 bits (128), Expect = 2e-07
Identities = 63/232 (27%), Positives = 97/232 (41%), Gaps = 33/232 (14%)
Query: 15 LLMTLLLGRLTGVAGEEELQVIQPDKSISVAAGESATLHCTVT--SLIPVGPIQWFRGA- 71
L+++L+L L G + QV PDK + GE A C ++ + +++FRG
Sbjct: 3 LMLSLVLSLLK--LGSGQWQVFGPDKPVQALVGEDAAFSCFLSPKTNAEAMEVRFFRGQF 60
Query: 72 -------GPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISNITPADAGTYYCVKFR 124
G++ + Q + R V D + S+R+ NIT DAG Y C R
Sbjct: 61 SSVVHLYRDGKDQPFMQMPQYQGRTKLVKDSIAEGRI--SLRLENITVLDAGLYGC---R 115
Query: 125 KGSPDHVEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKW- 183
S + + A EL V A S P++S + C+S G+ PR T KW
Sbjct: 116 ISSQSYYQ---KAIWELQVSALGSVPLIS---ITGYVDRDIQLLCQSSGWFPRP-TAKWK 168
Query: 184 FKNGNELS-DFQTNVDPAGDSVSYSIHSTAKVVLTREDVHSQVICEVAHVTL 234
G +LS D +TN D G ++ LT ++ + C + H L
Sbjct: 169 GPQGQDLSTDSRTNRDMHG-------LFDVEISLTVQENAGSISCSMRHAHL 213
>gi|94957742 butyrophilin-like 8 isoform 2 precursor [Homo sapiens]
Length = 500
Score = 53.9 bits (128), Expect = 2e-07
Identities = 63/232 (27%), Positives = 97/232 (41%), Gaps = 33/232 (14%)
Query: 15 LLMTLLLGRLTGVAGEEELQVIQPDKSISVAAGESATLHCTVT--SLIPVGPIQWFRGA- 71
L+++L+L L G + QV PDK + GE A C ++ + +++FRG
Sbjct: 3 LMLSLVLSLLK--LGSGQWQVFGPDKPVQALVGEDAAFSCFLSPKTNAEAMEVRFFRGQF 60
Query: 72 -------GPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISNITPADAGTYYCVKFR 124
G++ + Q + R V D + S+R+ NIT DAG Y C R
Sbjct: 61 SSVVHLYRDGKDQPFMQMPQYQGRTKLVKDSIAEGRI--SLRLENITVLDAGLYGC---R 115
Query: 125 KGSPDHVEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKW- 183
S + + A EL V A S P++S + C+S G+ PR T KW
Sbjct: 116 ISSQSYYQ---KAIWELQVSALGSVPLIS---ITGYVDRDIQLLCQSSGWFPRP-TAKWK 168
Query: 184 FKNGNELS-DFQTNVDPAGDSVSYSIHSTAKVVLTREDVHSQVICEVAHVTL 234
G +LS D +TN D G ++ LT ++ + C + H L
Sbjct: 169 GPQGQDLSTDSRTNRDMHG-------LFDVEISLTVQENAGSISCSMRHAHL 213
>gi|13376271 butyrophilin-like 8 isoform 1 precursor [Homo sapiens]
Length = 347
Score = 53.9 bits (128), Expect = 2e-07
Identities = 63/232 (27%), Positives = 97/232 (41%), Gaps = 33/232 (14%)
Query: 15 LLMTLLLGRLTGVAGEEELQVIQPDKSISVAAGESATLHCTVT--SLIPVGPIQWFRGA- 71
L+++L+L L G + QV PDK + GE A C ++ + +++FRG
Sbjct: 3 LMLSLVLSLLK--LGSGQWQVFGPDKPVQALVGEDAAFSCFLSPKTNAEAMEVRFFRGQF 60
Query: 72 -------GPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISNITPADAGTYYCVKFR 124
G++ + Q + R V D + S+R+ NIT DAG Y C R
Sbjct: 61 SSVVHLYRDGKDQPFMQMPQYQGRTKLVKDSIAEGRI--SLRLENITVLDAGLYGC---R 115
Query: 125 KGSPDHVEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKW- 183
S + + A EL V A S P++S + C+S G+ PR T KW
Sbjct: 116 ISSQSYYQ---KAIWELQVSALGSVPLIS---ITGYVDRDIQLLCQSSGWFPRP-TAKWK 168
Query: 184 FKNGNELS-DFQTNVDPAGDSVSYSIHSTAKVVLTREDVHSQVICEVAHVTL 234
G +LS D +TN D G ++ LT ++ + C + H L
Sbjct: 169 GPQGQDLSTDSRTNRDMHG-------LFDVEISLTVQENAGSISCSMRHAHL 213
>gi|239752604 PREDICTED: similar to immunoglobulin lambda-like
polypeptide 1 [Homo sapiens]
Length = 490
Score = 53.1 bits (126), Expect = 4e-07
Identities = 83/337 (24%), Positives = 129/337 (38%), Gaps = 50/337 (14%)
Query: 25 TGVAGEEELQVIQPDKSISVAAGES-ATLHCTVTSLIPVG-PIQWFRGAGPGRELIYNQK 82
T +A + + P S + ES A L C V P + W GA
Sbjct: 161 TSLAASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGA-------LTSG 213
Query: 83 EGHFPRVTTVSDLTKRNNMDFSIRISNITPADAGT--YYCVKFRKGSPDHVEFKSGAGTE 140
FP V S L ++ + +T ++ GT Y C K P + + +
Sbjct: 214 VHTFPAVLQSSGLYSLSS------VVTVTSSNFGTQTYTCNVDHK--PSNTKVDKTVERK 265
Query: 141 LSVRAKPS-APVVSGPAARATP---------QHTVSFTCESHGFSPRD--ITLKWFKNGN 188
V P AP V+GP+ P T TC S D + W+ +G
Sbjct: 266 CCVECPPCPAPPVAGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVQFNWYVDGM 325
Query: 189 ELSDFQTNVDPAGDSVSYSIHSTAKVVLTREDVHSQVI------CEVAHVTLQGDPLRGT 242
E+ + +T P + +ST +VV VH + C+V++ +G P
Sbjct: 326 EVHNAKTK--PREEQ----FNSTFRVVSVLTVVHQDWLNGKEYKCKVSN---KGLPAPIE 376
Query: 243 ANLSETIRVPPTLEV-TQQPVRAE---NQVNVTCQVRKFYPQRLQLTWLENGNVSRTETA 298
+S+T P +V T P R E NQV++TC V+ FYP + + W NG
Sbjct: 377 KTISKTKGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKT 436
Query: 299 STLTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHD 335
+ + DG++ S L V+ S + +C V H+
Sbjct: 437 TPPMLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHE 473
Score = 45.1 bits (105), Expect = 1e-04
Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 7/131 (5%)
Query: 118 YYCVKFRKGSPDHVEFKSGAGTELSVRAKPSAPVVSG--PAARATPQHTVSFTCESHGFS 175
Y C KG P +E T + +P P V P+ ++ VS TC GF
Sbjct: 362 YKCKVSNKGLPAPIE-----KTISKTKGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFY 416
Query: 176 PRDITLKWFKNGNELSDFQTNVDPAGDSVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQ 235
P DI ++W NG ++++T S+ ++S V +R + C V H L
Sbjct: 417 PSDIAVEWESNGQPENNYKTTPPMLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 476
Query: 236 GDPLRGTANLS 246
+ + +LS
Sbjct: 477 NHYTQKSLSLS 487
Score = 36.2 bits (82), Expect = 0.053
Identities = 51/248 (20%), Positives = 83/248 (33%), Gaps = 28/248 (11%)
Query: 134 KSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDF 193
+S T L+ K + P +R+T + T + C + P +T+ W +G S
Sbjct: 156 RSHGTTSLAASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSW-NSGALTSGV 214
Query: 194 QTNVDPAGDSVSYSIHSTAKVVL------------------TREDVHSQVICEVAHVTLQ 235
T S YS+ S V T+ D + C V
Sbjct: 215 HTFPAVLQSSGLYSLSSVVTVTSSNFGTQTYTCNVDHKPSNTKVDKTVERKCCVECPPCP 274
Query: 236 GDPLRGTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKFYPQ--RLQLTWLENGNVS 293
P+ G + + TL +++ P VTC V + +Q W +G
Sbjct: 275 APPVAGPSVFLFPPKPKDTLMISRTP-------EVTCVVVDVSHEDPEVQFNWYVDGMEV 327
Query: 294 RTETASTLTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHPK 353
E + T+ +S L V + + C+V + G PA + K P+
Sbjct: 328 HNAKTKPREEQFNSTFRVVSVLTVVHQDWLNGKEYKCKVSNKGLPAPIEKTISKTKGQPR 387
Query: 354 EQGSNTAP 361
E T P
Sbjct: 388 EPQVYTLP 395
>gi|32699028 V-set and immunoglobulin domain containing 1 [Homo
sapiens]
Length = 387
Score = 52.8 bits (125), Expect = 6e-07
Identities = 56/194 (28%), Positives = 85/194 (43%), Gaps = 19/194 (9%)
Query: 14 FLLMTLLLGRLTGVAGEEELQVIQPDKSISVAAGESATLHCTVTSLIPVGP---IQW--F 68
FL+++ L G+++ V QV PD ++V G + TL C T+ + IQW F
Sbjct: 9 FLILSCLAGQVSVV------QVTIPDGFVNVTVGSNVTLICIYTTTVASREQLSIQWSFF 62
Query: 69 RGAGPGRELIYNQKEGHFPRVTTVSDLTKRNNM--DFSIRISNITPADAGTYYCVKFRKG 126
IY + G + D +N + SI IS++ PAD+G Y C
Sbjct: 63 HKKEMEPISIYFSQGGQAVAIGQFKDRITGSNDPGNASITISHMQPADSGIYICDV--NN 120
Query: 127 SPDHVEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFK- 185
PD + G +SV KPS P+ S R HT+S +C S +P + W K
Sbjct: 121 PPDFLGQNQGI-LNVSVLVKPSKPLCS-VQGRPETGHTISLSCLSALGTPSPV-YYWHKL 177
Query: 186 NGNELSDFQTNVDP 199
G ++ + N +P
Sbjct: 178 EGRDIVPVKENFNP 191
>gi|4758822 nephrin precursor [Homo sapiens]
Length = 1241
Score = 52.0 bits (123), Expect = 9e-07
Identities = 82/347 (23%), Positives = 139/347 (40%), Gaps = 45/347 (12%)
Query: 19 LLLGRLTGVAGEEELQVIQP------DKSISVAAGESATLHCTVTSLIPVGPIQWFRGAG 72
LLLG LT + + P ++++V G S L C V++ P +QW A
Sbjct: 12 LLLGLLTEGLAQLAIPASVPRGFWALPENLTVVEGASVELRCGVST--PGSAVQW---AK 66
Query: 73 PGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISNITPADAGTYYCVKFRKG-SPDHV 131
G L + + FPR D + +F + I +D Y C R P+ V
Sbjct: 67 DGLLLGPDPRIPGFPRYRLEGDPARG---EFHLHIEACDLSDDAEYECQVGRSEMGPELV 123
Query: 132 EFKSGAGTELSVRAKPSAPVVSGPAAR-----ATPQHTVSFTCESHGFSPR-DITLKWFK 185
+ LS+ P +++ A A ++ V+ C S P DIT+
Sbjct: 124 SPR----VILSILVPPKLLLLTPEAGTMVTWVAGQEYVVN--CVSGDAKPAPDITI--LL 175
Query: 186 NGNELSDFQTNVDPAGDSVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANL 245
+G +SD NV+ +++ +TA+V D ++CE + L+ P++ A+
Sbjct: 176 SGQTISDISANVNEGSQQKLFTVEATARVTPRSSDNRQLLVCEASSPALEA-PIK--ASF 232
Query: 246 SETIRVPPTLEVTQQP------VRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETAS 299
+ + PP V + P VRA + + C R P L WL+NG T +
Sbjct: 233 TVNVLFPPGPPVIEWPGLDEGHVRAGQSLELPCVARGGNP-LATLQWLKNGQPVSTAWGT 291
Query: 300 TLTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDL 346
T+ S L++ V +L+C+ H+ A ++ H +
Sbjct: 292 EHTQAVA-----RSVLVMTVRPEDHGAQLSCEA-HNSVSAGTQEHGI 332
Score = 33.9 bits (76), Expect = 0.27
Identities = 55/249 (22%), Positives = 91/249 (36%), Gaps = 32/249 (12%)
Query: 31 EELQVIQPDKSISVAAGESATLHCTVTSLIPVGPIQWFRGAGPGRE--LIYNQKEGHFPR 88
++L + P + + AG L C P + W++ + E L + H
Sbjct: 442 QKLWIEGPPEGQKLRAGTRVRLVCLAIGGNPEPSLMWYKDSRTVTESRLPQESRRVHLGS 501
Query: 89 VTTVSDLTKRNNMDFSIRISNIT-PADAGTYYCVKFRKGSPDHVEFKSGAGTELSVRAKP 147
V +++ FS + +T P+D + K + S A T+L+V+ P
Sbjct: 502 V-------EKSGSTFSRELVLVTGPSDNQAKFTCKAGQLS---------ASTQLAVQFPP 545
Query: 148 SAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPAGDSVSYS 207
+ + A+ P ++ TC S +P + L W K G L A S +
Sbjct: 546 TNVTILANASALRPGDALNLTCVSVSSNP-PVNLSWDKEGERLEGVAAPPRRAPFKGSAA 604
Query: 208 IHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQPVRAENQ 267
S V +R+ H Q + AH +A L ET+ L V +P Q
Sbjct: 605 ARSVLLQVSSRD--HGQRVTCRAH----------SAELRETVSSFYRLNVLYRPEFLGEQ 652
Query: 268 VNVTCQVRK 276
V V V +
Sbjct: 653 VLVVTAVEQ 661
>gi|148664211 immunoglobulin superfamily, member 4D isoform 2 [Homo
sapiens]
Length = 414
Score = 51.6 bits (122), Expect = 1e-06
Identities = 55/251 (21%), Positives = 105/251 (41%), Gaps = 22/251 (8%)
Query: 40 KSISVAAGESATLHCTVTSLIPVGPIQWFRGAGPGRELIYNQKEGHFPRVTTVSDLTKRN 99
K ++V GE AT+ C V + P R+ IY + P + L +
Sbjct: 50 KDVTVIEGEVATISCQVNK----SDDSVIQLLNPNRQTIYFRD--FRPLKDSRFQLLNFS 103
Query: 100 NMDFSIRISNITPADAGTYYCVKFRKGSPDHVEFKSGAGTELSVRAKPSAPVVSGPAARA 159
+ + + ++N++ +D G Y+C + P + T ++V P ++ A
Sbjct: 104 SSELKVSLTNVSISDEGRYFCQLYT--DPPQESY-----TTITVLVPPRNLMIDIQKDTA 156
Query: 160 TPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPAGDSVSYSIHSTAKVVLTRE 219
+ C + P T++WFK EL ++ V+ D Y++ S + + +E
Sbjct: 157 VEGEEIEVNCTAMASKPAT-TIRWFKGNTELKG-KSEVEEWSDM--YTVTSQLMLKVHKE 212
Query: 220 DVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVT---QQPVRAENQVNVTCQVRK 276
D VIC+V H + G+ L+ L + +++T Q R + + +TC+
Sbjct: 213 DDGVPVICQVEHPAVTGN-LQTQRYLEVQYKPQVHIQMTYPLQGLTREGDALELTCEAIG 271
Query: 277 FYPQRLQLTWL 287
PQ + +TW+
Sbjct: 272 -KPQPVMVTWV 281
>gi|148664190 immunoglobulin superfamily, member 4D isoform 1 [Homo
sapiens]
Length = 442
Score = 51.6 bits (122), Expect = 1e-06
Identities = 55/251 (21%), Positives = 105/251 (41%), Gaps = 22/251 (8%)
Query: 40 KSISVAAGESATLHCTVTSLIPVGPIQWFRGAGPGRELIYNQKEGHFPRVTTVSDLTKRN 99
K ++V GE AT+ C V + P R+ IY + P + L +
Sbjct: 50 KDVTVIEGEVATISCQVNK----SDDSVIQLLNPNRQTIYFRD--FRPLKDSRFQLLNFS 103
Query: 100 NMDFSIRISNITPADAGTYYCVKFRKGSPDHVEFKSGAGTELSVRAKPSAPVVSGPAARA 159
+ + + ++N++ +D G Y+C + P + T ++V P ++ A
Sbjct: 104 SSELKVSLTNVSISDEGRYFCQLYT--DPPQESY-----TTITVLVPPRNLMIDIQKDTA 156
Query: 160 TPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPAGDSVSYSIHSTAKVVLTRE 219
+ C + P T++WFK EL ++ V+ D Y++ S + + +E
Sbjct: 157 VEGEEIEVNCTAMASKPAT-TIRWFKGNTELKG-KSEVEEWSDM--YTVTSQLMLKVHKE 212
Query: 220 DVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVT---QQPVRAENQVNVTCQVRK 276
D VIC+V H + G+ L+ L + +++T Q R + + +TC+
Sbjct: 213 DDGVPVICQVEHPAVTGN-LQTQRYLEVQYKPQVHIQMTYPLQGLTREGDALELTCEAIG 271
Query: 277 FYPQRLQLTWL 287
PQ + +TW+
Sbjct: 272 -KPQPVMVTWV 281
>gi|167857788 MHC class I polypeptide-related sequence B [Homo
sapiens]
Length = 383
Score = 50.8 bits (120), Expect = 2e-06
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 251 VPPTLEVTQQPVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTLTENKDGTYN 310
VPP + VT V +E + VTC+ FYP+ + LTW ++G T DG
Sbjct: 205 VPPMVNVTCSEV-SEGNITVTCRASSFYPRNITLTWRQDGVSLSHNTQQWGDVLPDGNGT 263
Query: 311 WMSWLLVNVSAHRDDVKLTCQVEHDG 336
+ +W+ + ++ + TC +EH G
Sbjct: 264 YQTWVATRI-RQGEEQRFTCYMEHSG 288
Score = 31.2 bits (69), Expect = 1.7
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 143 VRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELS 191
V + + P + + ++ TC + F PR+ITL W ++G LS
Sbjct: 199 VAIRRTVPPMVNVTCSEVSEGNITVTCRASSFYPRNITLTWRQDGVSLS 247
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.131 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,793,494
Number of Sequences: 37866
Number of extensions: 775111
Number of successful extensions: 3408
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 218
Number of HSP's that attempted gapping in prelim test: 2686
Number of HSP's gapped (non-prelim): 805
length of query: 398
length of database: 18,247,518
effective HSP length: 104
effective length of query: 294
effective length of database: 14,309,454
effective search space: 4206979476
effective search space used: 4206979476
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.