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Search of human proteins with 208022639
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|208022639 hypothetical protein LOC130162 isoform 2 [Homo
sapiens]
(464 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|208022639 hypothetical protein LOC130162 isoform 2 [Homo sapi... 926 0.0
gi|208022637 hypothetical protein LOC130162 isoform 1 [Homo sapi... 926 0.0
gi|4758012 clathrin heavy chain 1 [Homo sapiens] 69 1e-11
gi|242247001 clathrin, heavy polypeptide-like 1 isoform 2 [Homo ... 66 6e-11
gi|242246985 clathrin, heavy polypeptide-like 1 isoform 1 [Homo ... 66 6e-11
gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo sa... 36 0.085
gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo s... 36 0.085
gi|154354990 ankyrin repeat domain 26 [Homo sapiens] 34 0.25
gi|51871374 UTP14, U3 small nucleolar ribonucleoprotein, homolog... 33 0.55
gi|149363642 coiled-coil domain containing 144A [Homo sapiens] 33 0.72
gi|167614504 laminin, beta 1 precursor [Homo sapiens] 32 1.2
gi|237858621 polyamine modulated factor 1 binding protein 1 isof... 32 1.2
gi|237858619 polyamine modulated factor 1 binding protein 1 isof... 32 1.2
gi|7706093 toll-like receptor 7 [Homo sapiens] 32 1.6
gi|164565368 TBC1 domain family, member 14 isoform a [Homo sapiens] 32 1.6
gi|164565366 TBC1 domain family, member 14 isoform a [Homo sapiens] 32 1.6
gi|21361348 UTP14, U3 small nucleolar ribonucleoprotein, homolog... 32 1.6
gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo... 31 2.1
gi|4557269 adenylosuccinate lyase isoform a [Homo sapiens] 31 2.1
gi|33946282 hypothetical protein LOC25962 isoform 1 [Homo sapiens] 31 2.1
gi|33946280 hypothetical protein LOC25962 isoform 2 [Homo sapiens] 31 2.1
gi|186928850 mitochondrial ribosomal protein S27 [Homo sapiens] 31 2.7
gi|164565381 TBC1 domain family, member 14 isoform b [Homo sapiens] 30 3.6
gi|239756957 PREDICTED: dynein, axonemal, heavy chain 17 [Homo s... 30 4.6
gi|55770834 centromere protein F [Homo sapiens] 30 4.6
gi|239751459 PREDICTED: dynein, axonemal, heavy chain 17 [Homo s... 30 6.1
gi|239745966 PREDICTED: dynein, axonemal, heavy chain 17 [Homo s... 30 6.1
gi|194272142 myosin IXB isoform 2 [Homo sapiens] 29 7.9
gi|33356170 myosin IXB isoform 1 [Homo sapiens] 29 7.9
gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens] 29 7.9
>gi|208022639 hypothetical protein LOC130162 isoform 2 [Homo
sapiens]
Length = 464
Score = 926 bits (2392), Expect = 0.0
Identities = 464/464 (100%), Positives = 464/464 (100%)
Query: 1 MRIIESNSSKIQSQIDHIKQCRAEYDTKEVKYCTFSKDPSKPIPGMTLQESMNLDALTKY 60
MRIIESNSSKIQSQIDHIKQCRAEYDTKEVKYCTFSKDPSKPIPGMTLQESMNLDALTKY
Sbjct: 1 MRIIESNSSKIQSQIDHIKQCRAEYDTKEVKYCTFSKDPSKPIPGMTLQESMNLDALTKY 60
Query: 61 MKHLEDKYAEIKQAMLIKYVPAQRKADLDEEMIVLLKRRDVAENLNKKLQFCHQRLQIIS 120
MKHLEDKYAEIKQAMLIKYVPAQRKADLDEEMIVLLKRRDVAENLNKKLQFCHQRLQIIS
Sbjct: 61 MKHLEDKYAEIKQAMLIKYVPAQRKADLDEEMIVLLKRRDVAENLNKKLQFCHQRLQIIS 120
Query: 121 QALSSWVKSDMSSPFQDFVEQIQKTKYLQGDQGIVEELMEDDPRRAKEAEIMLHYIERFN 180
QALSSWVKSDMSSPFQDFVEQIQKTKYLQGDQGIVEELMEDDPRRAKEAEIMLHYIERFN
Sbjct: 121 QALSSWVKSDMSSPFQDFVEQIQKTKYLQGDQGIVEELMEDDPRRAKEAEIMLHYIERFN 180
Query: 181 ELISLGEYEKAACYAANSPRRILRNIGTMNTFKAVGKIRGKPLPLLLFFEALFITSHAFP 240
ELISLGEYEKAACYAANSPRRILRNIGTMNTFKAVGKIRGKPLPLLLFFEALFITSHAFP
Sbjct: 181 ELISLGEYEKAACYAANSPRRILRNIGTMNTFKAVGKIRGKPLPLLLFFEALFITSHAFP 240
Query: 241 CPVDAALTLEGIKCGLSEKRLDLVTNWVTQERLTFSEEAGDVICDYGEQDTYNKAKCLAL 300
CPVDAALTLEGIKCGLSEKRLDLVTNWVTQERLTFSEEAGDVICDYGEQDTYNKAKCLAL
Sbjct: 241 CPVDAALTLEGIKCGLSEKRLDLVTNWVTQERLTFSEEAGDVICDYGEQDTYNKAKCLAL 300
Query: 301 AQIVYSECGLHKKAILCLCKQGQTHRVMEYIQQLKDFTTDDLLQLLMSCPQVELIQCLTK 360
AQIVYSECGLHKKAILCLCKQGQTHRVMEYIQQLKDFTTDDLLQLLMSCPQVELIQCLTK
Sbjct: 301 AQIVYSECGLHKKAILCLCKQGQTHRVMEYIQQLKDFTTDDLLQLLMSCPQVELIQCLTK 360
Query: 361 ELNEKQPSLSFGLAILHLFSADMKKVGIKLLQEINKGGIDAVESLMINDSFCSIEKWQEV 420
ELNEKQPSLSFGLAILHLFSADMKKVGIKLLQEINKGGIDAVESLMINDSFCSIEKWQEV
Sbjct: 361 ELNEKQPSLSFGLAILHLFSADMKKVGIKLLQEINKGGIDAVESLMINDSFCSIEKWQEV 420
Query: 421 ANICSQNGFDKLSNDITSILRSQAAVTEISEEDDAVNLMEHVFW 464
ANICSQNGFDKLSNDITSILRSQAAVTEISEEDDAVNLMEHVFW
Sbjct: 421 ANICSQNGFDKLSNDITSILRSQAAVTEISEEDDAVNLMEHVFW 464
>gi|208022637 hypothetical protein LOC130162 isoform 1 [Homo
sapiens]
Length = 586
Score = 926 bits (2392), Expect = 0.0
Identities = 464/464 (100%), Positives = 464/464 (100%)
Query: 1 MRIIESNSSKIQSQIDHIKQCRAEYDTKEVKYCTFSKDPSKPIPGMTLQESMNLDALTKY 60
MRIIESNSSKIQSQIDHIKQCRAEYDTKEVKYCTFSKDPSKPIPGMTLQESMNLDALTKY
Sbjct: 123 MRIIESNSSKIQSQIDHIKQCRAEYDTKEVKYCTFSKDPSKPIPGMTLQESMNLDALTKY 182
Query: 61 MKHLEDKYAEIKQAMLIKYVPAQRKADLDEEMIVLLKRRDVAENLNKKLQFCHQRLQIIS 120
MKHLEDKYAEIKQAMLIKYVPAQRKADLDEEMIVLLKRRDVAENLNKKLQFCHQRLQIIS
Sbjct: 183 MKHLEDKYAEIKQAMLIKYVPAQRKADLDEEMIVLLKRRDVAENLNKKLQFCHQRLQIIS 242
Query: 121 QALSSWVKSDMSSPFQDFVEQIQKTKYLQGDQGIVEELMEDDPRRAKEAEIMLHYIERFN 180
QALSSWVKSDMSSPFQDFVEQIQKTKYLQGDQGIVEELMEDDPRRAKEAEIMLHYIERFN
Sbjct: 243 QALSSWVKSDMSSPFQDFVEQIQKTKYLQGDQGIVEELMEDDPRRAKEAEIMLHYIERFN 302
Query: 181 ELISLGEYEKAACYAANSPRRILRNIGTMNTFKAVGKIRGKPLPLLLFFEALFITSHAFP 240
ELISLGEYEKAACYAANSPRRILRNIGTMNTFKAVGKIRGKPLPLLLFFEALFITSHAFP
Sbjct: 303 ELISLGEYEKAACYAANSPRRILRNIGTMNTFKAVGKIRGKPLPLLLFFEALFITSHAFP 362
Query: 241 CPVDAALTLEGIKCGLSEKRLDLVTNWVTQERLTFSEEAGDVICDYGEQDTYNKAKCLAL 300
CPVDAALTLEGIKCGLSEKRLDLVTNWVTQERLTFSEEAGDVICDYGEQDTYNKAKCLAL
Sbjct: 363 CPVDAALTLEGIKCGLSEKRLDLVTNWVTQERLTFSEEAGDVICDYGEQDTYNKAKCLAL 422
Query: 301 AQIVYSECGLHKKAILCLCKQGQTHRVMEYIQQLKDFTTDDLLQLLMSCPQVELIQCLTK 360
AQIVYSECGLHKKAILCLCKQGQTHRVMEYIQQLKDFTTDDLLQLLMSCPQVELIQCLTK
Sbjct: 423 AQIVYSECGLHKKAILCLCKQGQTHRVMEYIQQLKDFTTDDLLQLLMSCPQVELIQCLTK 482
Query: 361 ELNEKQPSLSFGLAILHLFSADMKKVGIKLLQEINKGGIDAVESLMINDSFCSIEKWQEV 420
ELNEKQPSLSFGLAILHLFSADMKKVGIKLLQEINKGGIDAVESLMINDSFCSIEKWQEV
Sbjct: 483 ELNEKQPSLSFGLAILHLFSADMKKVGIKLLQEINKGGIDAVESLMINDSFCSIEKWQEV 542
Query: 421 ANICSQNGFDKLSNDITSILRSQAAVTEISEEDDAVNLMEHVFW 464
ANICSQNGFDKLSNDITSILRSQAAVTEISEEDDAVNLMEHVFW
Sbjct: 543 ANICSQNGFDKLSNDITSILRSQAAVTEISEEDDAVNLMEHVFW 586
>gi|4758012 clathrin heavy chain 1 [Homo sapiens]
Length = 1675
Score = 68.6 bits (166), Expect = 1e-11
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 15/160 (9%)
Query: 175 YIERFNELISLGEYEKAACYAANSPRRILRNIGTMNTFKAVGKIRGKPLPLLLFFEALFI 234
+ +FN L + G Y +AA AAN+P+ ILR T+ F++V G+ PLL +F L
Sbjct: 364 FARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGILLD 423
Query: 235 TSHAFPCPVDAALTLEGIKCGLSEKRLDLVTNWVTQERLTFSEEAGDVICDYGEQDTYNK 294
++ +LE + L + R L+ W+ +++L SEE GD++ K
Sbjct: 424 QGQ-----LNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLV----------K 468
Query: 295 AKCLALAQIVYSECGLHKKAILCLCKQGQTHRVMEYIQQL 334
+ LA VY + K I C + GQ +++ Y +++
Sbjct: 469 SVDPTLALSVYLRANVPNKVIQCFAETGQVQKIVLYAKKV 508
>gi|242247001 clathrin, heavy polypeptide-like 1 isoform 2 [Homo
sapiens]
Length = 1583
Score = 66.2 bits (160), Expect = 6e-11
Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 15/160 (9%)
Query: 175 YIERFNELISLGEYEKAACYAANSPRRILRNIGTMNTFKAVGKIRGKPLPLLLFFEALFI 234
++ +FN L + G Y +AA AA++P+ ILR T+ F+++ G+ PLL +F L
Sbjct: 364 FVRKFNTLFAQGSYAEAAKVAASAPKGILRTRETVQKFQSIPAQSGQASPLLQYFGILLD 423
Query: 235 TSHAFPCPVDAALTLEGIKCGLSEKRLDLVTNWVTQERLTFSEEAGDVICDYGEQDTYNK 294
++ +LE L + R L+ W+ +++L SEE GD++ K
Sbjct: 424 QGQ-----LNKLESLELCHLVLQQGRKQLLEKWLKEDKLECSEELGDLV----------K 468
Query: 295 AKCLALAQIVYSECGLHKKAILCLCKQGQTHRVMEYIQQL 334
LA VY + K I C + GQ +++ Y +++
Sbjct: 469 TTDPMLALSVYLRANVPSKVIQCFAETGQFQKIVLYAKKV 508
>gi|242246985 clathrin, heavy polypeptide-like 1 isoform 1 [Homo
sapiens]
Length = 1640
Score = 66.2 bits (160), Expect = 6e-11
Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 15/160 (9%)
Query: 175 YIERFNELISLGEYEKAACYAANSPRRILRNIGTMNTFKAVGKIRGKPLPLLLFFEALFI 234
++ +FN L + G Y +AA AA++P+ ILR T+ F+++ G+ PLL +F L
Sbjct: 364 FVRKFNTLFAQGSYAEAAKVAASAPKGILRTRETVQKFQSIPAQSGQASPLLQYFGILLD 423
Query: 235 TSHAFPCPVDAALTLEGIKCGLSEKRLDLVTNWVTQERLTFSEEAGDVICDYGEQDTYNK 294
++ +LE L + R L+ W+ +++L SEE GD++ K
Sbjct: 424 QGQ-----LNKLESLELCHLVLQQGRKQLLEKWLKEDKLECSEELGDLV----------K 468
Query: 295 AKCLALAQIVYSECGLHKKAILCLCKQGQTHRVMEYIQQL 334
LA VY + K I C + GQ +++ Y +++
Sbjct: 469 TTDPMLALSVYLRANVPSKVIQCFAETGQFQKIVLYAKKV 508
>gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo
sapiens]
Length = 1843
Score = 35.8 bits (81), Expect = 0.085
Identities = 30/139 (21%), Positives = 67/139 (48%), Gaps = 12/139 (8%)
Query: 48 LQESMNLDALTKYMKHLEDKYAEIKQAMLIKYVPAQRKADLDEEMIVLLKRRDVAENLNK 107
+QE +L K L + A++++ + + + E I +L++ + E+LN+
Sbjct: 515 VQEKQSLQNCQNLSKDLMKEKAQLEKTI-------ETLRENSERQIKILEQEN--EHLNQ 565
Query: 108 KLQFCHQRLQIISQALSSWVKSDMSSPFQDFVEQIQKTKYLQGDQGIVEELME---DDPR 164
+ QR QI ++A ++ + + E K ++ ++ +++ +E +
Sbjct: 566 TVSSLRQRSQISAEARVKDIEKENKILHESIKETSSKLSKIEFEKRQIKKELEHYKEKGE 625
Query: 165 RAKEAEIMLHYIERFNELI 183
RA+E E LH++E+ NEL+
Sbjct: 626 RAEELENELHHLEKENELL 644
>gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo
sapiens]
Length = 1870
Score = 35.8 bits (81), Expect = 0.085
Identities = 30/139 (21%), Positives = 67/139 (48%), Gaps = 12/139 (8%)
Query: 48 LQESMNLDALTKYMKHLEDKYAEIKQAMLIKYVPAQRKADLDEEMIVLLKRRDVAENLNK 107
+QE +L K L + A++++ + + + E I +L++ + E+LN+
Sbjct: 515 VQEKQSLQNCQNLSKDLMKEKAQLEKTI-------ETLRENSERQIKILEQEN--EHLNQ 565
Query: 108 KLQFCHQRLQIISQALSSWVKSDMSSPFQDFVEQIQKTKYLQGDQGIVEELME---DDPR 164
+ QR QI ++A ++ + + E K ++ ++ +++ +E +
Sbjct: 566 TVSSLRQRSQISAEARVKDIEKENKILHESIKETSSKLSKIEFEKRQIKKELEHYKEKGE 625
Query: 165 RAKEAEIMLHYIERFNELI 183
RA+E E LH++E+ NEL+
Sbjct: 626 RAEELENELHHLEKENELL 644
>gi|154354990 ankyrin repeat domain 26 [Homo sapiens]
Length = 1710
Score = 34.3 bits (77), Expect = 0.25
Identities = 30/145 (20%), Positives = 69/145 (47%), Gaps = 18/145 (12%)
Query: 3 IIESNSSKIQSQIDHIKQCRAEYDTKEVKYCTFSKDPSKPIPGMTLQESM---NLDALTK 59
++E + ++ S+ +H+K+ + +Y+ ++ + + + + ++SM +L+ ++
Sbjct: 1188 LLEERNKELISECNHLKERQYQYENEKAEREVVVRQLQQELADTLKKQSMSEASLEVTSR 1247
Query: 60 YMKHLEDKYAEIKQAMLIKYVPAQRKADLDEEMIVLLKRRDVAENLNKKLQFCHQRLQII 119
Y +LED+ ++K+ + Q + L E R A +K+Q Q+L+
Sbjct: 1248 YRINLEDETQDLKKKL------GQIRNQLQEAQ----DRHTEAVRCAEKMQDHKQKLEKD 1297
Query: 120 SQALSSWVKSDMSSPFQDFVEQIQK 144
+ L VK M D +E++QK
Sbjct: 1298 NAKLKVTVKKQM-----DKIEELQK 1317
>gi|51871374 UTP14, U3 small nucleolar ribonucleoprotein, homolog C
[Homo sapiens]
Length = 766
Score = 33.1 bits (74), Expect = 0.55
Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 7/127 (5%)
Query: 82 AQRKADLDEEMIVLLKRRDVAENLNKKLQFCHQRLQIISQ----ALSSWVKSDMSSPFQD 137
A+ + +EE +LL+ + ++L K+ + SQ + S V S++ + Q
Sbjct: 407 AEERPVAEEE--ILLREFEERQSLRKRSELNQDAEPASSQETKDSSSQEVLSELRALSQK 464
Query: 138 FVEQIQKTKYLQGDQGIVEELMEDDPRRAKEAEIMLHYIERFNELISLGEYEKAACYAAN 197
E+ Q K +G V ++ ++P + ++L ER L L E K C+
Sbjct: 465 LKEKHQSRKQKASSEGTVPQVQREEPAPEEAEPLLLQRSERVQTLEELEELGKEDCFQNK 524
Query: 198 S-PRRIL 203
PR +L
Sbjct: 525 ELPRPVL 531
>gi|149363642 coiled-coil domain containing 144A [Homo sapiens]
Length = 1427
Score = 32.7 bits (73), Expect = 0.72
Identities = 31/139 (22%), Positives = 63/139 (45%), Gaps = 10/139 (7%)
Query: 55 DALTKYMKHLEDKYAEIKQAMLIKYVPAQRKADLDEEMIVLLKRRDVAENLN-------K 107
+ L K K L+ + +K M + + + KA+ + +I R+++ E LN K
Sbjct: 1165 ETLQKNKKQLKQEVVNLKSYME-RNMLERGKAEWHKLLIEERARKEIEEKLNEAILTLQK 1223
Query: 108 KLQFCHQRLQIISQALSSWVKSDMSSPFQDFVEQIQKTKYLQGD--QGIVEELMEDDPRR 165
+ H++L + + ++ +K+ M +D +I + K Q D + +E E
Sbjct: 1224 QAAVSHEQLVQLREDNTTSIKTQMELTIKDLESEISRIKTSQADFNKTELERYKELYLEE 1283
Query: 166 AKEAEIMLHYIERFNELIS 184
K E + + + R NE+I+
Sbjct: 1284 VKVRESLSNELSRTNEMIA 1302
>gi|167614504 laminin, beta 1 precursor [Homo sapiens]
Length = 1786
Score = 32.0 bits (71), Expect = 1.2
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 20/139 (14%)
Query: 331 IQQLKDFTTDDLLQL--------------LMSCPQVELIQCLTKELNEKQPSLSFGLAIL 376
I+Q+++F T D L + S PQ +Q LT+++ E+ SLS IL
Sbjct: 1504 IKQIRNFLTQDSADLDSIEAVANEVLKMEMPSTPQQ--LQNLTEDIRERVESLSQVEVIL 1561
Query: 377 HLFSADMKKVGIKLLQEINKGGIDAVESLMINDSFCSIEKWQEVANICSQNGFDKLSNDI 436
+AD+ + + LL+E + A + + D + E A + ++ + DI
Sbjct: 1562 QHSAADIARAEM-LLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADEDI 1620
Query: 437 ---TSILRSQAAVTEISEE 452
++L S + T SEE
Sbjct: 1621 QGTQNLLTSIESETAASEE 1639
>gi|237858621 polyamine modulated factor 1 binding protein 1 isoform
b [Homo sapiens]
Length = 882
Score = 32.0 bits (71), Expect = 1.2
Identities = 37/177 (20%), Positives = 75/177 (42%), Gaps = 19/177 (10%)
Query: 2 RIIESNSSKIQSQIDHIKQCRAEYDT---KEVKYC--TFSKDPSKPIPGMTLQESMNLDA 56
++I+ + +I Q + + +A+ D KE Y T +K+ ++ + + D
Sbjct: 543 QVIQDLNKEIALQKESLMSLQAQLDKALQKEKHYLQTTITKEA---YDALSRKSAACQDD 599
Query: 57 LTKYMKHLEDKYAEIKQAMLIKYVPAQRKADLDEEMIVLLKRRDVAENLNKKLQFCHQ-- 114
LT+ ++ L +E K ++KA L+EE+I +R +KL+ HQ
Sbjct: 600 LTQALEKLNHVTSETKSLQQSLTQTQEKKAQLEEEIIAYEERMKKLNTELRKLRGFHQES 659
Query: 115 ---------RLQIISQALSSWVKSDMSSPFQDFVEQIQKTKYLQGDQGIVEELMEDD 162
+L+ +S + W K + ++ Q ++ + + E L+EDD
Sbjct: 660 ELEVHAFDKKLEEMSCQVLQWQKQHQNDLKMLAAKEEQLREFQEEMAALKENLLEDD 716
>gi|237858619 polyamine modulated factor 1 binding protein 1 isoform
a [Homo sapiens]
Length = 1007
Score = 32.0 bits (71), Expect = 1.2
Identities = 37/177 (20%), Positives = 75/177 (42%), Gaps = 19/177 (10%)
Query: 2 RIIESNSSKIQSQIDHIKQCRAEYDT---KEVKYC--TFSKDPSKPIPGMTLQESMNLDA 56
++I+ + +I Q + + +A+ D KE Y T +K+ ++ + + D
Sbjct: 688 QVIQDLNKEIALQKESLMSLQAQLDKALQKEKHYLQTTITKEA---YDALSRKSAACQDD 744
Query: 57 LTKYMKHLEDKYAEIKQAMLIKYVPAQRKADLDEEMIVLLKRRDVAENLNKKLQFCHQ-- 114
LT+ ++ L +E K ++KA L+EE+I +R +KL+ HQ
Sbjct: 745 LTQALEKLNHVTSETKSLQQSLTQTQEKKAQLEEEIIAYEERMKKLNTELRKLRGFHQES 804
Query: 115 ---------RLQIISQALSSWVKSDMSSPFQDFVEQIQKTKYLQGDQGIVEELMEDD 162
+L+ +S + W K + ++ Q ++ + + E L+EDD
Sbjct: 805 ELEVHAFDKKLEEMSCQVLQWQKQHQNDLKMLAAKEEQLREFQEEMAALKENLLEDD 861
>gi|7706093 toll-like receptor 7 [Homo sapiens]
Length = 1049
Score = 31.6 bits (70), Expect = 1.6
Identities = 25/110 (22%), Positives = 50/110 (45%), Gaps = 9/110 (8%)
Query: 28 KEVKYCTFSKD--PSKPIPGMTLQESMNLDALTKYMKHLEDKYAEIKQAMLIKYVPAQRK 85
K C +D P +P+ L +S+ L T ++ + DKYA+ + + Y+ QR
Sbjct: 922 KHFNLCLEERDWLPGQPVLE-NLSQSIQLSKKTVFV--MTDKYAKTENFKIAFYLSHQRL 978
Query: 86 ADLDEEMIVLLKRRDVAENLNKKLQFCHQRLQIISQALSSWVKSDMSSPF 135
D ++I+L+ E +K +F R ++ ++ W + + P+
Sbjct: 979 MDEKVDVIILI----FLEKPFQKSKFLQLRKRLCGSSVLEWPTNPQAHPY 1024
>gi|164565368 TBC1 domain family, member 14 isoform a [Homo sapiens]
Length = 693
Score = 31.6 bits (70), Expect = 1.6
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 10/110 (9%)
Query: 23 AEYDTKEVK--YCTFSKDPSKP-IPGMTLQESMNLDALTKYMKHLEDKYAEIKQAMLIKY 79
A+ D+K ++ Y + PSKP P ++++++ + L+ LED+ A + +
Sbjct: 272 AQKDSKRIQKEYEDKAGRPSKPPSPKQNVRKNLDFEPLSTTALILEDRPANLPAKPAEE- 330
Query: 80 VPAQRKADLDEEMIVLLKRRDVAENLNKKLQFCHQRLQI---ISQALSSW 126
AQ+ EEM+V K+R++ E +K Q +R ++ I A+ +W
Sbjct: 331 --AQKHRQQYEEMVVQAKKRELKEAQRRKKQL-EERCRVEESIGNAVLTW 377
>gi|164565366 TBC1 domain family, member 14 isoform a [Homo sapiens]
Length = 693
Score = 31.6 bits (70), Expect = 1.6
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 10/110 (9%)
Query: 23 AEYDTKEVK--YCTFSKDPSKP-IPGMTLQESMNLDALTKYMKHLEDKYAEIKQAMLIKY 79
A+ D+K ++ Y + PSKP P ++++++ + L+ LED+ A + +
Sbjct: 272 AQKDSKRIQKEYEDKAGRPSKPPSPKQNVRKNLDFEPLSTTALILEDRPANLPAKPAEE- 330
Query: 80 VPAQRKADLDEEMIVLLKRRDVAENLNKKLQFCHQRLQI---ISQALSSW 126
AQ+ EEM+V K+R++ E +K Q +R ++ I A+ +W
Sbjct: 331 --AQKHRQQYEEMVVQAKKRELKEAQRRKKQL-EERCRVEESIGNAVLTW 377
>gi|21361348 UTP14, U3 small nucleolar ribonucleoprotein, homolog A
[Homo sapiens]
Length = 771
Score = 31.6 bits (70), Expect = 1.6
Identities = 27/115 (23%), Positives = 46/115 (40%), Gaps = 5/115 (4%)
Query: 94 VLLKRRDVAENLNKKLQFCHQRLQIISQAL----SSWVKSDMSSPFQDFVEQIQKTKYLQ 149
+LL+ + +L K+ + SQ S V S++ Q E Q K
Sbjct: 419 ILLREFEERRSLRKRSELSQDAEPAGSQETKDSGSQEVLSELRVLSQKLKENHQSRKQKA 478
Query: 150 GDQGIVEELMEDDPRRAKEAEIMLHYIERFNELISLGEYEKAACYAANS-PRRIL 203
+G + ++ ++P +E ++L ER L L E K C+ PR +L
Sbjct: 479 SSEGTIPQVQREEPAPEEEEPLLLQRPERVQTLEELEELGKEECFQNKELPRPVL 533
>gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo
sapiens]
Length = 1938
Score = 31.2 bits (69), Expect = 2.1
Identities = 30/138 (21%), Positives = 60/138 (43%), Gaps = 18/138 (13%)
Query: 49 QESMNLDALTKYMKHLEDKYAEIKQAM-----------LIKYVPAQRKADLDEEMIVLLK 97
+E MN + + K ++LEDK + +K+ + K+ + +L EEM L +
Sbjct: 933 EEEMNSELVAK-KRNLEDKCSSLKRDIDDLELTLTKVEKEKHATENKVKNLSEEMTALEE 991
Query: 98 RRDVAENLNKKLQFCHQR----LQIISQALSSWVK--SDMSSPFQDFVEQIQKTKYLQGD 151
K LQ HQ+ LQ+ ++ +K + + D +++ K L+ D
Sbjct: 992 NISKLTKEKKSLQEAHQQTLDDLQVEEDKVNGLIKINAKLEQQTDDLEGSLEQEKKLRAD 1051
Query: 152 QGIVEELMEDDPRRAKEA 169
+ +E D + ++E+
Sbjct: 1052 LERAKRKLEGDLKMSQES 1069
>gi|4557269 adenylosuccinate lyase isoform a [Homo sapiens]
Length = 484
Score = 31.2 bits (69), Expect = 2.1
Identities = 15/68 (22%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 110 QFCHQRLQIISQALSSWVKSDMSSPFQDFVEQIQKTKYLQGDQGIVEELMEDDPRRAKEA 169
Q CH++++++SQ +S VK + D +E+IQ Y ++ L++ + +
Sbjct: 397 QDCHEKIRVLSQQAASVVKQEGGD--NDLIERIQVDAYFSPIHSQLDHLLDPSSFTGRAS 454
Query: 170 EIMLHYIE 177
+ + ++E
Sbjct: 455 QQVQRFLE 462
>gi|33946282 hypothetical protein LOC25962 isoform 1 [Homo sapiens]
Length = 1812
Score = 31.2 bits (69), Expect = 2.1
Identities = 18/70 (25%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 327 VMEYIQQ-LKDFTTDDLLQLLMSCPQVELIQCLTKELNEKQPSLSFGLAILHLFSADMKK 385
++EY++Q + + T + + L + + + C + +Q L + LA++ LFSA+
Sbjct: 911 LIEYVKQNIDNLMTPEGVGLTTALRVLCNVACPPPPVEGQQKDLKWNLAVIQLFSAEGMD 970
Query: 386 VGIKLLQEIN 395
I++LQ++N
Sbjct: 971 TFIRVLQKLN 980
>gi|33946280 hypothetical protein LOC25962 isoform 2 [Homo sapiens]
Length = 1147
Score = 31.2 bits (69), Expect = 2.1
Identities = 18/70 (25%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 327 VMEYIQQ-LKDFTTDDLLQLLMSCPQVELIQCLTKELNEKQPSLSFGLAILHLFSADMKK 385
++EY++Q + + T + + L + + + C + +Q L + LA++ LFSA+
Sbjct: 911 LIEYVKQNIDNLMTPEGVGLTTALRVLCNVACPPPPVEGQQKDLKWNLAVIQLFSAEGMD 970
Query: 386 VGIKLLQEIN 395
I++LQ++N
Sbjct: 971 TFIRVLQKLN 980
>gi|186928850 mitochondrial ribosomal protein S27 [Homo sapiens]
Length = 414
Score = 30.8 bits (68), Expect = 2.7
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 109 LQFCHQRLQIISQALSSWVKSDMSSPFQDFVEQIQKTKYLQGDQGIVEELMEDDPRRAKE 168
++ C + L ++ L + +D +S EQ Q + QG + +VE+L ++ ++K
Sbjct: 273 IKLCREALDVLGAVLKALTSADGASE-----EQSQNDEDNQGSEKLVEQLDIEETEQSK- 326
Query: 169 AEIMLHYIERFNELIS 184
+ Y+ERF L S
Sbjct: 327 ---LPQYLERFKALHS 339
>gi|164565381 TBC1 domain family, member 14 isoform b [Homo sapiens]
Length = 413
Score = 30.4 bits (67), Expect = 3.6
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 39 PSKP-IPGMTLQESMNLDALTKYMKHLEDKYAEIKQAMLIKYVPAQRKADLDEEMIVLLK 97
PSKP P ++++++ + L+ LED+ A + + AQ+ EEM+V K
Sbjct: 10 PSKPPSPKQNVRKNLDFEPLSTTALILEDRPANLPAKPAEE---AQKHRQQYEEMVVQAK 66
Query: 98 RRDVAENLNKKLQFCHQRLQI---ISQALSSW 126
+R++ E +K Q +R ++ I A+ +W
Sbjct: 67 KRELKEAQRRKKQL-EERCRVEESIGNAVLTW 97
>gi|239756957 PREDICTED: dynein, axonemal, heavy chain 17 [Homo
sapiens]
Length = 4470
Score = 30.0 bits (66), Expect = 4.6
Identities = 26/117 (22%), Positives = 52/117 (44%), Gaps = 21/117 (17%)
Query: 28 KEVKYCTFSKDPSKPIPGMTLQESMNLDALTKYMKHLE---DKYAEIKQAMLIKYVPAQR 84
+EVKY F + K IP + K++ +LE Y E+ +A+ + ++
Sbjct: 695 REVKYLNFQQQ--KEIPDSAESLFSENETFRKFVGNLELIVGWYNEVMKAVEFLLIKSEL 752
Query: 85 KADLDEEMI---------------VLLKRRDVAENLNKKLQFCHQRLQIISQALSSW 126
+A +D +++ + + R++ NL ++Q Q ++ ISQA+ W
Sbjct: 753 EA-IDVKLLSAETTLFWNGEGVFQYIQEVREILHNLQNRMQKAKQNIEGISQAMKDW 808
>gi|55770834 centromere protein F [Homo sapiens]
Length = 3114
Score = 30.0 bits (66), Expect = 4.6
Identities = 81/417 (19%), Positives = 166/417 (39%), Gaps = 43/417 (10%)
Query: 16 DHIKQCRAEYDTKEVKYCTFSKDPSKPIPGMTLQESMNLDALTKYMKHLEDKYAEIKQAM 75
D + + A+YD KY + K ++ Q A + +++K E ++ +
Sbjct: 341 DELVRTTAQYDQASTKYTALEQKLKKLTEDLSCQRQNAESARCSLEQKIKEKEKEFQEEL 400
Query: 76 LIKYVPAQRKADLDEEMIVLLKRRDVAENLNKKLQFC---HQRLQIISQALSSWVKSDMS 132
+ Q LD+E I + R L ++LQ H LQ L+S VK +
Sbjct: 401 SRQQRSFQ---TLDQECIQMKAR------LTQELQQAKNMHNVLQAELDKLTS-VKQQLE 450
Query: 133 SPFQDFVEQIQKTKYLQGDQGI-VEELMEDDPRRAKEAEIMLHYIERFNELISLGEYEKA 191
+ ++F K K + +Q ++ E++ RR+ E +++ N L+ +KA
Sbjct: 451 NNLEEF-----KQKLCRAEQAFQASQIKENELRRSMEE------MKKENNLLKSHSEQKA 499
Query: 192 --ACYAANSPRRILRNIGTMNTFKAVGKIRGKPLPLLLFFEALFITSHAFPCPVDAALTL 249
C+ + I + + F K + +L I + +LTL
Sbjct: 500 REVCHLEAELKNIKQCLNQSQNFAEEMKAKNTSQETMLRDLQEKINQQ------ENSLTL 553
Query: 250 EGIKCGLS--EKRLDLVTNWVTQERLTFSEEAGDVICDYGEQDTYNKAKCLALAQIVYSE 307
E +K ++ EK+ D + + ++R E+ D + E+++ L L + Y E
Sbjct: 554 EKLKLAVADLEKQRDCSQD-LLKKREHHIEQLNDKL-SKTEKESKALLSALELKKKEYEE 611
Query: 308 CGLHKKAILCLCKQGQTHRVMEYIQQLKDFTTDDLLQLLMSCPQVELIQCLTKELNEKQP 367
L ++ L C + + +++ ++ K+ + L +C + + I+ + E NE+
Sbjct: 612 --LKEEKTLFSCWKSENEKLLTQMESEKE-NLQSKINHLETCLKTQQIK--SHEYNERVR 666
Query: 368 SLSFGLAILHLFSADMKKVGIKLLQEINKGGIDAVESLMINDSFCSIEKWQEVANIC 424
+L L + ++ V E+ + +E L F + +E+ N+C
Sbjct: 667 TLEMDRENLSVEIRNLHNVLDSKSVEVETQKLAYME-LQQKAEFSDQKHQKEIENMC 722
>gi|239751459 PREDICTED: dynein, axonemal, heavy chain 17 [Homo
sapiens]
Length = 4485
Score = 29.6 bits (65), Expect = 6.1
Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 22/119 (18%)
Query: 28 KEVKYCTFSKDPSKPIPGMTLQESMNLDALTKYMKHLE---DKYAEIK------------ 72
+EVKY F + K IP + K++ +LE Y EIK
Sbjct: 683 REVKYLNFQQQ--KEIPDSAESLFSENETFRKFVGNLELIVGWYNEIKTIVKAVEFLLIK 740
Query: 73 ---QAMLIKYVPAQRKADLDEEMIV--LLKRRDVAENLNKKLQFCHQRLQIISQALSSW 126
+A+ +K + A+ + E + + + R++ NL ++Q Q ++ ISQA+ W
Sbjct: 741 SELEAIDVKLLSAETTLFWNGEGVFQYIQEVREILHNLQNRMQKAKQNIEGISQAMKDW 799
>gi|239745966 PREDICTED: dynein, axonemal, heavy chain 17 [Homo
sapiens]
Length = 4485
Score = 29.6 bits (65), Expect = 6.1
Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 22/119 (18%)
Query: 28 KEVKYCTFSKDPSKPIPGMTLQESMNLDALTKYMKHLE---DKYAEIK------------ 72
+EVKY F + K IP + K++ +LE Y EIK
Sbjct: 683 REVKYLNFQQQ--KEIPDSAESLFSENETFRKFVGNLELIVGWYNEIKTIVKAVEFLLIK 740
Query: 73 ---QAMLIKYVPAQRKADLDEEMIV--LLKRRDVAENLNKKLQFCHQRLQIISQALSSW 126
+A+ +K + A+ + E + + + R++ NL ++Q Q ++ ISQA+ W
Sbjct: 741 SELEAIDVKLLSAETTLFWNGEGVFQYIQEVREILHNLQNRMQKAKQNIEGISQAMKDW 799
>gi|194272142 myosin IXB isoform 2 [Homo sapiens]
Length = 2022
Score = 29.3 bits (64), Expect = 7.9
Identities = 26/110 (23%), Positives = 54/110 (49%), Gaps = 16/110 (14%)
Query: 75 MLIKYVPAQRKADLDEEMIVLLKRRDVAENLNKKLQFCHQRLQIISQALSSWVKSDMSSP 134
MLIK + K ++E + + + AE++ +RL ++ Q +K SSP
Sbjct: 1879 MLIKEQMRKYKVKMEE-----ISQLEAAESI------AFRRLSLLRQNAPWPLKLGFSSP 1927
Query: 135 FQDFVEQIQKTKYLQGDQGIVEELMEDDPR---RAKEAEIMLHYIERFNE 181
++ + + KT+ +Q ++ +E L+E++ +E EI++ I+ E
Sbjct: 1928 YEGVLNKSPKTRDIQEEE--LEVLLEEEAAGGDEDREKEILIERIQSIKE 1975
>gi|33356170 myosin IXB isoform 1 [Homo sapiens]
Length = 2157
Score = 29.3 bits (64), Expect = 7.9
Identities = 26/110 (23%), Positives = 54/110 (49%), Gaps = 16/110 (14%)
Query: 75 MLIKYVPAQRKADLDEEMIVLLKRRDVAENLNKKLQFCHQRLQIISQALSSWVKSDMSSP 134
MLIK + K ++E + + + AE++ +RL ++ Q +K SSP
Sbjct: 1879 MLIKEQMRKYKVKMEE-----ISQLEAAESI------AFRRLSLLRQNAPWPLKLGFSSP 1927
Query: 135 FQDFVEQIQKTKYLQGDQGIVEELMEDDPR---RAKEAEIMLHYIERFNE 181
++ + + KT+ +Q ++ +E L+E++ +E EI++ I+ E
Sbjct: 1928 YEGVLNKSPKTRDIQEEE--LEVLLEEEAAGGDEDREKEILIERIQSIKE 1975
>gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens]
Length = 2115
Score = 29.3 bits (64), Expect = 7.9
Identities = 36/175 (20%), Positives = 73/175 (41%), Gaps = 14/175 (8%)
Query: 8 SSKIQSQIDHIKQCRAEYDTKEVKYCTFSKDPSKPIPGMTLQESMNLDALTKYMKHLEDK 67
++ IQ Q + + + K+ + + + G+ Q ++ L+ +K E +
Sbjct: 511 NATIQQQDQELAGLKQQAKEKQAQLAQTLQQQEQASQGLRHQ----VEQLSSSLKQKEQQ 566
Query: 68 YAEIKQAM-LIKYVPAQRKADLDEEMIVLLKRRDVA----ENLNK----KLQFCHQRLQI 118
E+ + + AQ+ A EE L+ RD A E L K KL+ Q+LQ+
Sbjct: 567 LKEVAEKQEATRQDHAQQLATAAEEREASLRERDAALKQLEALEKEKAAKLEILQQQLQV 626
Query: 119 ISQALSSWVKSDMSSPFQDFVEQIQKTKYLQGDQGIVEELMEDDPRRAKEAEIML 173
++A S ++ ++ ++ E +K + LQ + + + E E+ L
Sbjct: 627 ANEARDS-AQTSVTQAQREKAELSRKVEELQACVETARQEQHEAQAQVAELELQL 680
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.134 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,168,939
Number of Sequences: 37866
Number of extensions: 674023
Number of successful extensions: 1865
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 1846
Number of HSP's gapped (non-prelim): 39
length of query: 464
length of database: 18,247,518
effective HSP length: 106
effective length of query: 358
effective length of database: 14,233,722
effective search space: 5095672476
effective search space used: 5095672476
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.