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Search of human proteins with 207442677
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|207442677 hypothetical protein LOC100128569 [Homo sapiens]
(209 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|207442677 hypothetical protein LOC100128569 [Homo sapiens] 461 e-130
gi|90652851 zinc finger transcription factor TRPS1 [Homo sapiens] 32 0.30
gi|4502809 chitotriosidase [Homo sapiens] 32 0.51
gi|239756718 PREDICTED: ring finger protein 222 [Homo sapiens] 31 0.66
gi|239751213 PREDICTED: ring finger protein 222 [Homo sapiens] 31 0.66
gi|226442736 ring finger protein 222 [Homo sapiens] 31 0.86
gi|239745703 PREDICTED: ring finger protein 222 [Homo sapiens] 31 0.86
gi|239751271 PREDICTED: similar to hCG1774990 [Homo sapiens] 30 1.5
gi|13375926 vacuolar protein sorting 37B [Homo sapiens] 30 1.5
gi|239757861 PREDICTED: similar to armadillo repeat containing, ... 29 2.5
gi|90403598 mesoderm posterior 2 homolog [Homo sapiens] 29 3.3
gi|222446620 hypothetical protein LOC342346 [Homo sapiens] 28 4.3
gi|62362414 c-abl oncogene 1, receptor tyrosine kinase isoform a... 28 4.3
gi|62362412 c-abl oncogene 1, receptor tyrosine kinase isoform b... 28 4.3
gi|194363771 sperm specific antigen 2 isoform 1 [Homo sapiens] 28 4.3
gi|28557788 sperm specific antigen 2 isoform 2 [Homo sapiens] 28 4.3
gi|239757095 PREDICTED: similar to hCG2005276 [Homo sapiens] 28 5.6
gi|239753264 PREDICTED: hypothetical protein [Homo sapiens] 28 5.6
gi|239747823 PREDICTED: hypothetical protein XP_002348330 [Homo ... 28 5.6
gi|239741693 PREDICTED: hypothetical protein XP_002342282 [Homo ... 28 5.6
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 28 5.6
gi|62000702 diacylglycerol kinase kappa [Homo sapiens] 27 9.5
gi|18860916 5'-3' exoribonuclease 2 [Homo sapiens] 27 9.5
>gi|207442677 hypothetical protein LOC100128569 [Homo sapiens]
Length = 209
Score = 461 bits (1185), Expect = e-130
Identities = 209/209 (100%), Positives = 209/209 (100%)
Query: 1 MQTLRQEAARPCIPSGTLEASFPAPLYSDDYLSLEGSRWPPAIRQATRWKYTPMGRDAAG 60
MQTLRQEAARPCIPSGTLEASFPAPLYSDDYLSLEGSRWPPAIRQATRWKYTPMGRDAAG
Sbjct: 1 MQTLRQEAARPCIPSGTLEASFPAPLYSDDYLSLEGSRWPPAIRQATRWKYTPMGRDAAG 60
Query: 61 QLWYTGLTNSDAWEAWYNLPRAPASPFREAYNRWHSCYQHRECSMPSAYTQHLRETAWHD 120
QLWYTGLTNSDAWEAWYNLPRAPASPFREAYNRWHSCYQHRECSMPSAYTQHLRETAWHD
Sbjct: 61 QLWYTGLTNSDAWEAWYNLPRAPASPFREAYNRWHSCYQHRECSMPSAYTQHLRETAWHD 120
Query: 121 PIVPAQYQAPSTRWGSALWKDRPIRGKEYVLNRNRYGVEPLWRASDYVPSLSAPQRPPGT 180
PIVPAQYQAPSTRWGSALWKDRPIRGKEYVLNRNRYGVEPLWRASDYVPSLSAPQRPPGT
Sbjct: 121 PIVPAQYQAPSTRWGSALWKDRPIRGKEYVLNRNRYGVEPLWRASDYVPSLSAPQRPPGT 180
Query: 181 TQNYREWVLEPYCPSTCQRSPPSLTPTPR 209
TQNYREWVLEPYCPSTCQRSPPSLTPTPR
Sbjct: 181 TQNYREWVLEPYCPSTCQRSPPSLTPTPR 209
>gi|90652851 zinc finger transcription factor TRPS1 [Homo sapiens]
Length = 1294
Score = 32.3 bits (72), Expect = 0.30
Identities = 14/25 (56%), Positives = 17/25 (68%)
Query: 91 YNRWHSCYQHRECSMPSAYTQHLRE 115
Y R HSCY+ R+CS +A TQ L E
Sbjct: 698 YRRAHSCYKCRQCSFTAADTQSLLE 722
>gi|4502809 chitotriosidase [Homo sapiens]
Length = 466
Score = 31.6 bits (70), Expect = 0.51
Identities = 14/25 (56%), Positives = 17/25 (68%)
Query: 1 MQTLRQEAARPCIPSGTLEASFPAP 25
+QTLRQE + P +PSGT E P P
Sbjct: 378 IQTLRQELSLPYLPSGTPELEVPKP 402
>gi|239756718 PREDICTED: ring finger protein 222 [Homo sapiens]
Length = 220
Score = 31.2 bits (69), Expect = 0.66
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 31 YLSLEGSRWPPAIRQATRWKYTPMGRDAAGQLWYTGLTN-----SDAWEAWYNLPRAPAS 85
+LS + SRWP + ++++ P+G + L G TN S AW R P S
Sbjct: 69 FLSKKSSRWPSMLDKSSQTLAVPVGLPSVPPLDSLGHTNPLAASSSAWRPPPGQARPPGS 128
Query: 86 PFREA 90
P + A
Sbjct: 129 PGQSA 133
>gi|239751213 PREDICTED: ring finger protein 222 [Homo sapiens]
Length = 220
Score = 31.2 bits (69), Expect = 0.66
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 31 YLSLEGSRWPPAIRQATRWKYTPMGRDAAGQLWYTGLTN-----SDAWEAWYNLPRAPAS 85
+LS + SRWP + ++++ P+G + L G TN S AW R P S
Sbjct: 69 FLSKKSSRWPSMLDKSSQTLAVPVGLPSVPPLDSLGHTNPLAASSSAWRPPPGQARPPGS 128
Query: 86 PFREA 90
P + A
Sbjct: 129 PGQSA 133
>gi|226442736 ring finger protein 222 [Homo sapiens]
Length = 220
Score = 30.8 bits (68), Expect = 0.86
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 31 YLSLEGSRWPPAIRQATRWKYTPMGRDAAGQLWYTGLTN-----SDAWEAWYNLPRAPAS 85
+LS + SRWP + ++++ P+G + L G TN S AW R P S
Sbjct: 69 FLSKKSSRWPSMLDKSSQTLAVPVGLPSVPPLDSLGHTNPLAASSPAWRPPPGQARPPGS 128
Query: 86 PFREA 90
P + A
Sbjct: 129 PGQSA 133
>gi|239745703 PREDICTED: ring finger protein 222 [Homo sapiens]
Length = 220
Score = 30.8 bits (68), Expect = 0.86
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 31 YLSLEGSRWPPAIRQATRWKYTPMGRDAAGQLWYTGLTN-----SDAWEAWYNLPRAPAS 85
+LS + SRWP + ++++ P+G + L G TN S AW R P S
Sbjct: 69 FLSKKSSRWPSMLDKSSQTLAVPVGLPSVPPLDSLGHTNPLAASSPAWRPPPGQARPPGS 128
Query: 86 PFREA 90
P + A
Sbjct: 129 PGQSA 133
>gi|239751271 PREDICTED: similar to hCG1774990 [Homo sapiens]
Length = 246
Score = 30.0 bits (66), Expect = 1.5
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 1 MQTLRQEAARPCIPSGTLEASFPAPLYSDDYLSLEGSRWPPAIRQATRWK 50
+Q LR R + S S PA ++D +S+ + P ++RQ W+
Sbjct: 8 IQNLRSHQDRRFLSSAVSSTSIPANFFTDSTISIREKQNPGSLRQKGGWR 57
>gi|13375926 vacuolar protein sorting 37B [Homo sapiens]
Length = 285
Score = 30.0 bits (66), Expect = 1.5
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 4/42 (9%)
Query: 169 PSLSAPQRPPG----TTQNYREWVLEPYCPSTCQRSPPSLTP 206
P L P PP T Q + + PY P QR PP L P
Sbjct: 236 PGLQCPPLPPRVGLPTQQGFSSQFVSPYPPPLPQRPPPRLPP 277
>gi|239757861 PREDICTED: similar to armadillo repeat containing,
X-linked 4 [Homo sapiens]
Length = 2382
Score = 29.3 bits (64), Expect = 2.5
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 36 GSRWPPAIRQATRWKYTPMGRDAAGQLWYTGLTNSDAW 73
G W A QA+ + G A G+LW G + +W
Sbjct: 1301 GGAWTGAENQASGGSWALAGNQAIGELWAAGQASDGSW 1338
>gi|90403598 mesoderm posterior 2 homolog [Homo sapiens]
Length = 397
Score = 28.9 bits (63), Expect = 3.3
Identities = 18/59 (30%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Query: 151 LNRNRYGVEPLWRASDYVPSL-SAPQRPPGTTQNYREWVLEPYCPSTCQRSPPSLTPTP 208
L R + +P W Y P + S P GTT + W CP T P P P
Sbjct: 236 LGRGVHDTDP-WATPPYCPKIQSPPYSSQGTTSDASLWTPPQGCPWTQSSPEPRNPPVP 293
>gi|222446620 hypothetical protein LOC342346 [Homo sapiens]
Length = 1141
Score = 28.5 bits (62), Expect = 4.3
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Query: 160 PLWRASDYVPSLSAPQRPPGTTQNYREWVLEPYCPSTCQRSPPSLTPTP 208
PL +PSL PQ+ PG+T+ R P+ S R PP P
Sbjct: 1097 PLLLLPPLIPSLRDPQQAPGSTRLSR----APHIESRVGRKPPEEPANP 1141
>gi|62362414 c-abl oncogene 1, receptor tyrosine kinase isoform a
[Homo sapiens]
Length = 1130
Score = 28.5 bits (62), Expect = 4.3
Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 9/110 (8%)
Query: 101 RECSMPSAYTQHLRETAWHDPIVPAQYQAPSTRWGSALWKDRPIRGKEYVLNRNRYGVEP 160
R CS S ++T W +P Q+ ++ S+ + + ++ L R R G
Sbjct: 715 RSCSA-SCVPHGAKDTEWRSVTLPRDLQSTGRQFDSSTFGGH--KSEKPALPRKRAGEN- 770
Query: 161 LWRASDYVP--SLSAPQRPPGTTQNYREWVLEPYCPSTCQRSPPSLTPTP 208
SD V +++ P R + + V + S+ SPP+LTP P
Sbjct: 771 ---RSDQVTRGTVTPPPRLVKKNEEAADEVFKDIMESSPGSSPPNLTPKP 817
>gi|62362412 c-abl oncogene 1, receptor tyrosine kinase isoform b
[Homo sapiens]
Length = 1149
Score = 28.5 bits (62), Expect = 4.3
Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 9/110 (8%)
Query: 101 RECSMPSAYTQHLRETAWHDPIVPAQYQAPSTRWGSALWKDRPIRGKEYVLNRNRYGVEP 160
R CS S ++T W +P Q+ ++ S+ + + ++ L R R G
Sbjct: 734 RSCSA-SCVPHGAKDTEWRSVTLPRDLQSTGRQFDSSTFGGH--KSEKPALPRKRAGEN- 789
Query: 161 LWRASDYVP--SLSAPQRPPGTTQNYREWVLEPYCPSTCQRSPPSLTPTP 208
SD V +++ P R + + V + S+ SPP+LTP P
Sbjct: 790 ---RSDQVTRGTVTPPPRLVKKNEEAADEVFKDIMESSPGSSPPNLTPKP 836
>gi|194363771 sperm specific antigen 2 isoform 1 [Homo sapiens]
Length = 1259
Score = 28.5 bits (62), Expect = 4.3
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 84 ASPFREAYNRWHSCYQHRECSM--PSAYTQHLRETAWHD 120
ASPF Y+ H+ Y +R CS+ PSA LR HD
Sbjct: 882 ASPFGCPYSHRHATYPYRVCSVNPPSAIEMQLRRVL-HD 919
>gi|28557788 sperm specific antigen 2 isoform 2 [Homo sapiens]
Length = 1256
Score = 28.5 bits (62), Expect = 4.3
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 84 ASPFREAYNRWHSCYQHRECSM--PSAYTQHLRETAWHD 120
ASPF Y+ H+ Y +R CS+ PSA LR HD
Sbjct: 882 ASPFGCPYSHRHATYPYRVCSVNPPSAIEMQLRRVL-HD 919
>gi|239757095 PREDICTED: similar to hCG2005276 [Homo sapiens]
Length = 261
Score = 28.1 bits (61), Expect = 5.6
Identities = 22/65 (33%), Positives = 26/65 (40%), Gaps = 21/65 (32%)
Query: 2 QTLRQEAARPCIPSGTLEASFPAPLYSDDYLSLEGSRW-----PPAIRQATRWKYTPMGR 56
QT +QEAA P P G SLEG RW PA+R W +
Sbjct: 28 QTEQQEAASPLPPCG----------------SLEGRRWSGASSAPAVRPHQGWSQSSHRG 71
Query: 57 DAAGQ 61
D+A Q
Sbjct: 72 DSAHQ 76
>gi|239753264 PREDICTED: hypothetical protein [Homo sapiens]
Length = 480
Score = 28.1 bits (61), Expect = 5.6
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 162 WRASDYVPSLSAPQRPPGTTQNYREWVLEPYCPSTCQRSPPSLT 205
W + L+AP RP + L P+ P C SPP ++
Sbjct: 52 WEVNGKEGRLAAPVRPLEKGMSLPHLYLGPHVPHVCMTSPPPIS 95
>gi|239747823 PREDICTED: hypothetical protein XP_002348330 [Homo
sapiens]
Length = 444
Score = 28.1 bits (61), Expect = 5.6
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 162 WRASDYVPSLSAPQRPPGTTQNYREWVLEPYCPSTCQRSPPSLT 205
W + L+AP RP + L P+ P C SPP ++
Sbjct: 52 WEVNGKEGRLAAPVRPLEKGMSLPHLYLGPHVPHVCMTSPPPIS 95
>gi|239741693 PREDICTED: hypothetical protein XP_002342282 [Homo
sapiens]
Length = 480
Score = 28.1 bits (61), Expect = 5.6
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 162 WRASDYVPSLSAPQRPPGTTQNYREWVLEPYCPSTCQRSPPSLT 205
W + L+AP RP + L P+ P C SPP ++
Sbjct: 52 WEVNGKEGRLAAPVRPLEKGMSLPHLYLGPHVPHVCMTSPPPIS 95
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 28.1 bits (61), Expect = 5.6
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 174 PQRPPGTTQNYREWVLEPYCPSTC--QRSPPSLTPTPR 209
P PP Q +E P P+TC +R P LTP+ R
Sbjct: 442 PSPPPPPAQEEQEESPPPVVPATCSRKRGRPPLTPSQR 479
>gi|62000702 diacylglycerol kinase kappa [Homo sapiens]
Length = 1271
Score = 27.3 bits (59), Expect = 9.5
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 77 YNLPRAPASPFREAYNRWHSCYQHR 101
Y +P A +PF + W+S Y HR
Sbjct: 313 YKIPAAENNPFLVGMHCWYSSYSHR 337
>gi|18860916 5'-3' exoribonuclease 2 [Homo sapiens]
Length = 950
Score = 27.3 bits (59), Expect = 9.5
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 21 SFPAPLYSDDYL----SLEGSRWPPAIRQATRWKYTPMGRDAAGQLWY 64
+F P +++DY+ L G+R P A+ + + W+ + GR QL +
Sbjct: 754 NFKDPQFAEDYIFKAVMLPGARKPAAVLKPSDWEKSSNGRQWKPQLGF 801
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.132 0.456
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,706,863
Number of Sequences: 37866
Number of extensions: 566289
Number of successful extensions: 1372
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1358
Number of HSP's gapped (non-prelim): 28
length of query: 209
length of database: 18,247,518
effective HSP length: 98
effective length of query: 111
effective length of database: 14,536,650
effective search space: 1613568150
effective search space used: 1613568150
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.