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Search of human proteins with 20149663
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|20149663 coiled-coil domain containing 90B [Homo sapiens]
(254 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|20149663 coiled-coil domain containing 90B [Homo sapiens] 497 e-141
gi|72534716 coiled-coil domain containing 90A [Homo sapiens] 228 4e-60
gi|38570058 hypothetical protein LOC80129 [Homo sapiens] 42 7e-04
gi|4557701 keratin 17 [Homo sapiens] 39 0.003
gi|38044112 restin isoform b [Homo sapiens] 39 0.004
gi|4506751 restin isoform a [Homo sapiens] 39 0.004
gi|4757752 angiopoietin-like 1 precursor [Homo sapiens] 39 0.004
gi|109255234 centrosomal protein 290kDa [Homo sapiens] 39 0.006
gi|154354990 ankyrin repeat domain 26 [Homo sapiens] 39 0.006
gi|4502443 dystonin isoform 1e precursor [Homo sapiens] 38 0.007
gi|169646281 coiled-coil domain containing 14 [Homo sapiens] 38 0.007
gi|149363642 coiled-coil domain containing 144A [Homo sapiens] 38 0.010
gi|27894337 keratin 20 [Homo sapiens] 37 0.017
gi|151101151 coiled-coil domain containing 2 isoform b [Homo sap... 37 0.017
gi|151101140 coiled-coil domain containing 2 isoform a [Homo sap... 37 0.017
gi|151105223 coiled-coil domain containing 2 isoform a [Homo sap... 37 0.017
gi|151105229 coiled-coil domain containing 2 isoform a [Homo sap... 37 0.017
gi|143770880 laminin, beta 4 [Homo sapiens] 37 0.022
gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens] 37 0.022
gi|42794779 myosin 18A isoform b [Homo sapiens] 36 0.028
gi|28416946 myosin 18A isoform a [Homo sapiens] 36 0.028
gi|109659847 filamin A interacting protein 1-like isoform 3 [Hom... 36 0.037
gi|109659849 filamin A interacting protein 1-like isoform 2 [Hom... 36 0.037
gi|109659845 filamin A interacting protein 1-like isoform 1 [Hom... 36 0.037
gi|198442834 coiled-coil domain containing 152 [Homo sapiens] 36 0.037
gi|6912236 angiopoietin-like 2 precursor [Homo sapiens] 36 0.037
gi|15431310 keratin 14 [Homo sapiens] 35 0.048
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 35 0.048
gi|157388975 coiled-coil domain containing 99 [Homo sapiens] 35 0.048
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens] 35 0.063
>gi|20149663 coiled-coil domain containing 90B [Homo sapiens]
Length = 254
Score = 497 bits (1280), Expect = e-141
Identities = 254/254 (100%), Positives = 254/254 (100%)
Query: 1 MNSRQAWRLFLSQGRGDRWVSRPRGHFSPALRREFFTTTTKEGYDRRPVDITPLEQRKLT 60
MNSRQAWRLFLSQGRGDRWVSRPRGHFSPALRREFFTTTTKEGYDRRPVDITPLEQRKLT
Sbjct: 1 MNSRQAWRLFLSQGRGDRWVSRPRGHFSPALRREFFTTTTKEGYDRRPVDITPLEQRKLT 60
Query: 61 FDTHALVQDLETHGFDKTQAETIVSALTALSNVSLDTIYKEMVTQAQQEITVQQLMAHLD 120
FDTHALVQDLETHGFDKTQAETIVSALTALSNVSLDTIYKEMVTQAQQEITVQQLMAHLD
Sbjct: 61 FDTHALVQDLETHGFDKTQAETIVSALTALSNVSLDTIYKEMVTQAQQEITVQQLMAHLD 120
Query: 121 AIRKDMVILEKSEFANLRAENEKMKIELDQVKQQLMHETSRIRADNKLDINLERSRVTDM 180
AIRKDMVILEKSEFANLRAENEKMKIELDQVKQQLMHETSRIRADNKLDINLERSRVTDM
Sbjct: 121 AIRKDMVILEKSEFANLRAENEKMKIELDQVKQQLMHETSRIRADNKLDINLERSRVTDM 180
Query: 181 FTDQEKQLMETTTEFTKKDTQTKSIISETSNKIDAEIASLKTLMESNKLETIRYLAASVF 240
FTDQEKQLMETTTEFTKKDTQTKSIISETSNKIDAEIASLKTLMESNKLETIRYLAASVF
Sbjct: 181 FTDQEKQLMETTTEFTKKDTQTKSIISETSNKIDAEIASLKTLMESNKLETIRYLAASVF 240
Query: 241 TCLAIALGFYRFWK 254
TCLAIALGFYRFWK
Sbjct: 241 TCLAIALGFYRFWK 254
>gi|72534716 coiled-coil domain containing 90A [Homo sapiens]
Length = 359
Score = 228 bits (581), Expect = 4e-60
Identities = 117/229 (51%), Positives = 160/229 (69%), Gaps = 3/229 (1%)
Query: 28 SPAL---RREFFTTTTKEGYDRRPVDITPLEQRKLTFDTHALVQDLETHGFDKTQAETIV 84
+PAL RRE + +R+ D T RKL FDTHALV LE +GF QAE IV
Sbjct: 130 APALVSCRRELSLSAGSLQLERKRRDFTSSGSRKLYFDTHALVCLLEDNGFATQQAEIIV 189
Query: 85 SALTALSNVSLDTIYKEMVTQAQQEITVQQLMAHLDAIRKDMVILEKSEFANLRAENEKM 144
SAL + ++D +YK+MVT+ QQEIT QQ+M+ + ++KDM+ILEKSEF+ LRAENEK+
Sbjct: 190 SALVKILEANMDIVYKDMVTKMQQEITFQQVMSQIANVKKDMIILEKSEFSALRAENEKI 249
Query: 145 KIELDQVKQQLMHETSRIRADNKLDINLERSRVTDMFTDQEKQLMETTTEFTKKDTQTKS 204
K+EL Q+KQQ+M E ++R D KLD NLE+SRV ++++ EK+L+E TE Q
Sbjct: 250 KLELHQLKQQVMDEVIKVRTDTKLDFNLEKSRVKELYSLNEKKLLELRTEIVALHAQQDR 309
Query: 205 IISETSNKIDAEIASLKTLMESNKLETIRYLAASVFTCLAIALGFYRFW 253
+++T KI+ E+A LKT++ES+KL+ I+YLA S+FTCL +ALGFYR W
Sbjct: 310 ALTQTDRKIETEVAGLKTMLESHKLDNIKYLAGSIFTCLTVALGFYRLW 358
>gi|38570058 hypothetical protein LOC80129 [Homo sapiens]
Length = 715
Score = 41.6 bits (96), Expect = 7e-04
Identities = 44/193 (22%), Positives = 88/193 (45%), Gaps = 15/193 (7%)
Query: 43 GYDRRPVDITPLEQRKLTFDTHALVQDLE-THGFD---KTQAETIVSALTALSNVSLDTI 98
G+D R + ++ + +++A++++ H KTQ E + S +S +
Sbjct: 453 GFDMRLDVVLARTEQLVRLESNAVIENKTIAHNLQRKLKTQKERLESKELHMSLLRQKIA 512
Query: 99 YKEMVTQAQQEITVQQLMAHLDA--IRKDMVILEKSEFANLRAENEKMKIEL---DQVKQ 153
E QA+ + V++ AHL ++K + L+K E R + ++K +L +++K
Sbjct: 513 QLEEEKQARTALVVERDNAHLTIRNLQKKVERLQK-ELNTCRDLHTELKAKLADTNELKI 571
Query: 154 QLMHETSRIRADNKLDINLERSRVTDMFTDQEKQLMETTTEFTKKDTQTKSIISETSNKI 213
+ + +T I D+N R ++ M EK+LM +E + + K N I
Sbjct: 572 KTLEQTKAIE-----DLNKSRDQLEKMKEKAEKKLMSVKSELDTTEHEAKENKERARNMI 626
Query: 214 DAEIASLKTLMES 226
+ + +KTL +S
Sbjct: 627 EVVTSEMKTLKKS 639
>gi|4557701 keratin 17 [Homo sapiens]
Length = 432
Score = 39.3 bits (90), Expect = 0.003
Identities = 29/122 (23%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Query: 121 AIRKDMVILEKSEFANLRAENEKMKIELD-QVKQQLMHETSRIRADNKLDINLERSRVTD 179
A ++V KSE + LR + ++IEL Q+ + E + +N+ + L S++
Sbjct: 287 ATNSELVQSGKSEISELRRTMQALEIELQSQLSMKASLEGNLAETENRYCVQL--SQIQG 344
Query: 180 MFTDQEKQLMETTTEFTKKDTQTKSIISETSNKIDAEIASLKTLMESNKLETIRYLAASV 239
+ E+QL + E +++ + K I+ + +++ EIA+ + L+E +Y V
Sbjct: 345 LIGSVEEQLAQLRCEMEQQNQEYK-ILLDVKTRLEQEIATYRRLLEGEDAHLTQYKKEPV 403
Query: 240 FT 241
T
Sbjct: 404 TT 405
>gi|38044112 restin isoform b [Homo sapiens]
Length = 1392
Score = 38.9 bits (89), Expect = 0.004
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 113 QQLMAHLDAIRKDMVILEKSEFANLRAENEKMKIELDQVKQQLMHETSRIRADNKLDINL 172
QQ M L + E +EFA L+ + EKM+++ + L ++ RA + ++
Sbjct: 589 QQAMEELKVSFSKGLGTETAEFAELKTQIEKMRLDYQHEIENLQNQQDSERAAHAKEMEA 648
Query: 173 ERSRVTDMFTDQEKQLMETTTEFTKKDTQTKSIISETSNKI-DAEI 217
R+++ + ++E L ++ K + Q + +T NK+ +AEI
Sbjct: 649 LRAKLMKVIKEKENSLEAIRSKLDKAEDQHLVEMEDTLNKLQEAEI 694
>gi|4506751 restin isoform a [Homo sapiens]
Length = 1427
Score = 38.9 bits (89), Expect = 0.004
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 113 QQLMAHLDAIRKDMVILEKSEFANLRAENEKMKIELDQVKQQLMHETSRIRADNKLDINL 172
QQ M L + E +EFA L+ + EKM+++ + L ++ RA + ++
Sbjct: 624 QQAMEELKVSFSKGLGTETAEFAELKTQIEKMRLDYQHEIENLQNQQDSERAAHAKEMEA 683
Query: 173 ERSRVTDMFTDQEKQLMETTTEFTKKDTQTKSIISETSNKI-DAEI 217
R+++ + ++E L ++ K + Q + +T NK+ +AEI
Sbjct: 684 LRAKLMKVIKEKENSLEAIRSKLDKAEDQHLVEMEDTLNKLQEAEI 729
>gi|4757752 angiopoietin-like 1 precursor [Homo sapiens]
Length = 491
Score = 38.9 bits (89), Expect = 0.004
Identities = 32/133 (24%), Positives = 68/133 (51%), Gaps = 16/133 (12%)
Query: 80 AETIVSALTALSNVSLDTIYKEMVTQAQQEITVQQLMAHLDAIRKDMVILEKSEFANLRA 139
A TI +T + +L K+++++ ++EI V QL+ +D + V L LR
Sbjct: 73 ASTIKDMITRMDLENL----KDVLSRQKREIDVLQLVVDVDGNIVNEVKL-------LRK 121
Query: 140 ENEKMKIELDQVKQQLMHETSRIRADNKLDINLERSRVTDMFTDQEKQLMETTTEFTKKD 199
E+ M + Q+ QL+HE R R DN L+++ +++ ++ T ++++ T + + +
Sbjct: 122 ESRNMNSRVTQLYMQLLHEIIRKR-DNSLELSQLENKILNVTT----EMLKMATRYRELE 176
Query: 200 TQTKSIISETSNK 212
+ S+ +N+
Sbjct: 177 VKYASLTDLVNNQ 189
>gi|109255234 centrosomal protein 290kDa [Homo sapiens]
Length = 2479
Score = 38.5 bits (88), Expect = 0.006
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 112 VQQLMAHLDAIRKDMVILEKSEFANLRAENEKMKIELDQVKQQL-----MHETSRIRADN 166
V+++ + ++K IL + AN+ ENEK+K EL+++K L MH S+ +
Sbjct: 2141 VEKVQRENEQLKKASGILTSEKMANIEQENEKLKAELEKLKAHLGHQLSMHYESKTKGTE 2200
Query: 167 KLDINLERSR 176
K+ ER R
Sbjct: 2201 KIIAENERLR 2210
Score = 28.9 bits (63), Expect = 4.5
Identities = 41/170 (24%), Positives = 69/170 (40%), Gaps = 33/170 (19%)
Query: 79 QAETIVSALTALSNVSLDTIYKEMVTQAQQEITVQQLMAHLDAIRKDMVILEKSEFANLR 138
Q +++ S L L VS D + Q+EIT + + + I+ + + E ++
Sbjct: 1633 QDDSLSSLLVKLKKVSQDL-------ERQREIT-ELKVKEFENIKLQLQENHEDEVKKVK 1684
Query: 139 AENEKMKIELDQVKQQLMHETSRIRADNKLDINLERS-------RVTDMFTDQEKQ---- 187
AE E +K LDQ +++ S ++A + + + R+ +EKQ
Sbjct: 1685 AEVEDLKYLLDQSQKESQCLKSELQAQKEANSRAPTTTMRNLVERLKSQLALKEKQQKAL 1744
Query: 188 ---LMETTTEFTKKDTQTKSIISETSNK---------IDAEIASLKTLME 225
L+E E T + IIS TS K +D LKT +E
Sbjct: 1745 SRALLELRAEMTA--AAEERIISATSQKEAHLNVQQIVDRHTRELKTQVE 1792
>gi|154354990 ankyrin repeat domain 26 [Homo sapiens]
Length = 1710
Score = 38.5 bits (88), Expect = 0.006
Identities = 39/176 (22%), Positives = 79/176 (44%), Gaps = 17/176 (9%)
Query: 69 DLETHGFD--------KTQAETIVSALTALSNVSLDTIYKEMVTQAQQEITVQQLMAHLD 120
DL+T F+ K + + + + L + L K + Q ++ ++++ + +
Sbjct: 1387 DLKTSQFEMDIQINKLKHKIDDLTAELETAGSKCLHLDTKNQILQ-EELLSMKTVQKKCE 1445
Query: 121 AIRKDMVILEKSEFANLRAENEKMKIELDQVKQQLMHETSRIRADNKLDINLERSRVTDM 180
++K+ LE+ E NLR+ E+ +EL QVKQ R R + E+ + ++
Sbjct: 1446 KLQKNKKKLEQ-EVINLRSHIERNMVELGQVKQYKQEIEERARQE-----IAEKLKEVNL 1499
Query: 181 FTDQEKQLMETTTEFTKKD-TQTKSIISETSNKIDAEIASLKTLMES-NKLETIRY 234
F + E +F + + KS + +++E++ +KT E NK E +Y
Sbjct: 1500 FLQAQAASQENLEQFRENNFASMKSQMELRIKDLESELSKIKTSQEDFNKTELEKY 1555
>gi|4502443 dystonin isoform 1e precursor [Homo sapiens]
Length = 2649
Score = 38.1 bits (87), Expect = 0.007
Identities = 40/201 (19%), Positives = 91/201 (45%), Gaps = 19/201 (9%)
Query: 52 TPLEQRKLTFDTHALVQDLETHGFDKTQAETIVSALTALSNVSLDTIYKEMVTQAQQEIT 111
+P+++R++ ++Q+ T T+++ + SL + +E + + ++
Sbjct: 1056 SPVKRRRMQSSADLIIQEFMDLRTRYTALVTLMTQYIKFAGDSLKRLEEEEIKRCKE--- 1112
Query: 112 VQQLMAHLDAI-RKDMVILEKSEFANLRAENEKMKIELDQVKQQLMHETSRIR--ADNKL 168
+ A+ D + R+ +LE S+ +E E+M EL + K ++ E ++R A+N+L
Sbjct: 1113 TSEHGAYSDLLQRQKATVLENSKLTGKISELERMVAELKKQKSRVEEELPKVREAAENEL 1172
Query: 169 --------DINLERSRVTDMFTDQEKQLMETTTEFTKKDTQTKSIISETSNKIDAEIASL 220
DI+L++ R ++ ++ E T +K+ + + E ++ E +
Sbjct: 1173 RKQQRNVEDISLQKIRAE---SEAKQYRRELETIVREKEAAEREL--ERVRQLTIEAEAK 1227
Query: 221 KTLMESNKLETIRYLAASVFT 241
+ +E N L L + FT
Sbjct: 1228 RAAVEENLLNFRNQLEENTFT 1248
>gi|169646281 coiled-coil domain containing 14 [Homo sapiens]
Length = 912
Score = 38.1 bits (87), Expect = 0.007
Identities = 43/214 (20%), Positives = 89/214 (41%), Gaps = 14/214 (6%)
Query: 9 LFLSQGRGDRWVSRPRGHFSPALRREFFTTTTKEGYDRRPVDITPLEQRKLTF---DTHA 65
LF S G+ S+ H SP + F T +E R + E++ L DT
Sbjct: 316 LFRSHGKETHLDSQT--HRSPTQSQPAFLATNEEKCAREQIREATSERKDLNIHVRDTKT 373
Query: 66 LVQDLETHGFDKTQAET-----IVSALTALSNVSLDTIYKEMVTQAQQEITVQQLMAHLD 120
+ + +KT + ++ L AL D+ + ++T+ + I+V ++
Sbjct: 374 VKDVQKAKNVNKTAEKVRIIKYLLGELKALVAEQEDSEIQRLITEMEACISVLPTVSGNT 433
Query: 121 AIRKDMVILEKSEFANLRAENEKMKIELDQVKQQLMHETSRIRADNKLDINLERSRVTDM 180
I+ ++ + + LR+EN +++ +L + QQL + + +D NLE + +
Sbjct: 434 DIQVEIALAMQP----LRSENAQLRRQLRILNQQLREQQKTQKPSGAVDCNLELFSLQSL 489
Query: 181 FTDQEKQLMETTTEFTKKDTQTKSIISETSNKID 214
+ QL E+ ++ + ++ N+ D
Sbjct: 490 NMSLQNQLEESLKSQELLQSKNEELLKVIENQKD 523
>gi|149363642 coiled-coil domain containing 144A [Homo sapiens]
Length = 1427
Score = 37.7 bits (86), Expect = 0.010
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 14/109 (12%)
Query: 136 NLRAENEKMKIELDQVKQQLMHETSRI----------RADNKLDINLERSRVTD--MFTD 183
NL+AE+EK + L + ++LM E + + +A K+D+ + V + D
Sbjct: 1083 NLQAESEKQILSLQEKNKELMDEYNHLKERMDQCEKEKAGRKIDLTEAQETVPSRCLHLD 1142
Query: 184 QEKQLME-TTTEFTKKDTQTK-SIISETSNKIDAEIASLKTLMESNKLE 230
E ++++ T F+ K Q + + + ++ E+ +LK+ ME N LE
Sbjct: 1143 AENEVLQLQQTLFSMKAIQKQCETLQKNKKQLKQEVVNLKSYMERNMLE 1191
Score = 30.4 bits (67), Expect = 1.6
Identities = 27/136 (19%), Positives = 61/136 (44%), Gaps = 7/136 (5%)
Query: 49 VDITPLEQRKLTFDTH-ALVQDLETHGFDKTQAETIVSALTALSNVSLDTIYKEMVTQAQ 107
+++ +E K +D AL Q+ E +K A+ + + + + + K + T+ Q
Sbjct: 687 LELQKIEWEKELYDLRLALKQENE----EKRNADMLYNKDSEQLRIKEEECGKVVETKQQ 742
Query: 108 QEITVQQLMAHLDAIRK--DMVILEKSEFANLRAENEKMKIELDQVKQQLMHETSRIRAD 165
+ +++L+ L +R D+V+ E+++ +E + +I DQ+ E R
Sbjct: 743 LKWNLRRLVKELRTVRNNLDLVVQERNDAQKQLSEEQDARILQDQILTSKQKELEMARKK 802
Query: 166 NKLDINLERSRVTDMF 181
+I+ + D+F
Sbjct: 803 MNSEISHRHQKEKDLF 818
>gi|27894337 keratin 20 [Homo sapiens]
Length = 424
Score = 37.0 bits (84), Expect = 0.017
Identities = 34/180 (18%), Positives = 75/180 (41%), Gaps = 22/180 (12%)
Query: 71 ETHGFDKTQAETIVSALTALSNVSLDTIYKEMVTQAQQEITVQQLMAHLDAIRKDMVILE 130
E G K T+ + A ++L I EM Q + + + L + + +L+
Sbjct: 211 EVDGLHKHLGNTVNVEVDAAPGLNLGVIMNEM-RQKYEVMAQKNLQEAKEQFERQTAVLQ 269
Query: 131 KSEFAN-------------LRAENEKMKIELDQ---VKQQLMHETSRIRADNKLDINLER 174
+ N LR ++ ++IEL +K+ L H + K + +
Sbjct: 270 QQVTVNTEELKGTEVQLTELRRTSQSLEIELQSHLSMKESLEHTLE----ETKARYSSQL 325
Query: 175 SRVTDMFTDQEKQLMETTTEFTKKDTQTKSIISETSNKIDAEIASLKTLMESNKLETIRY 234
+ + + + E QLM+ + +++ + I+ + +++ EIA+ + L+E ++T Y
Sbjct: 326 ANLQSLLSSLEAQLMQIRSNMERQNNEYH-ILLDIKTRLEQEIATYRRLLEGEDVKTTEY 384
>gi|151101151 coiled-coil domain containing 2 isoform b [Homo
sapiens]
Length = 372
Score = 37.0 bits (84), Expect = 0.017
Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 32/199 (16%)
Query: 62 DTHALVQDLETHGFDKTQAETIVSALTALS------NVSLDTIYKEMVTQAQQ----EIT 111
D + LV L T+ T+ E +++ L SLD I+ E + +Q E
Sbjct: 152 DYNMLVDKLNTN----TEMEEVMNDYNMLKAQNDRETQSLDVIFTERQAKEKQIRSVEEE 207
Query: 112 VQQLMAHLDAIRKDMVILEKSEFANLRAENEKMKIELDQVKQQLMHETSRIRADNKLDIN 171
++Q D I K+M + ++ ++ NEK+ ELD ++QQL S+ L+
Sbjct: 208 IEQEKQATDDIIKNMSFENQVKYLEMKTTNEKLLQELDTLQQQL---DSQNMKKESLEAE 264
Query: 172 LERSRVTDMFTDQEKQLMETTTEFTKKDTQTKSIIS--ETSNKI-------DAEIASLKT 222
+ S+V ++L E + + + KSI S E K+ + EIAS++
Sbjct: 265 IAHSQVKQEAVLLHEKLYELESHRDQMIAEDKSIGSPMEEREKLLKQIKDDNQEIASMER 324
Query: 223 LMESNK------LETIRYL 235
+ K +E IR L
Sbjct: 325 QLTDTKEKINQFIEEIRQL 343
>gi|151101140 coiled-coil domain containing 2 isoform a [Homo
sapiens]
Length = 600
Score = 37.0 bits (84), Expect = 0.017
Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 32/199 (16%)
Query: 62 DTHALVQDLETHGFDKTQAETIVSALTALS------NVSLDTIYKEMVTQAQQ----EIT 111
D + LV L T+ T+ E +++ L SLD I+ E + +Q E
Sbjct: 152 DYNMLVDKLNTN----TEMEEVMNDYNMLKAQNDRETQSLDVIFTERQAKEKQIRSVEEE 207
Query: 112 VQQLMAHLDAIRKDMVILEKSEFANLRAENEKMKIELDQVKQQLMHETSRIRADNKLDIN 171
++Q D I K+M + ++ ++ NEK+ ELD ++QQL S+ L+
Sbjct: 208 IEQEKQATDDIIKNMSFENQVKYLEMKTTNEKLLQELDTLQQQL---DSQNMKKESLEAE 264
Query: 172 LERSRVTDMFTDQEKQLMETTTEFTKKDTQTKSIIS--ETSNKI-------DAEIASLKT 222
+ S+V ++L E + + + KSI S E K+ + EIAS++
Sbjct: 265 IAHSQVKQEAVLLHEKLYELESHRDQMIAEDKSIGSPMEEREKLLKQIKDDNQEIASMER 324
Query: 223 LMESNK------LETIRYL 235
+ K +E IR L
Sbjct: 325 QLTDTKEKINQFIEEIRQL 343
>gi|151105223 coiled-coil domain containing 2 isoform a [Homo
sapiens]
Length = 600
Score = 37.0 bits (84), Expect = 0.017
Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 32/199 (16%)
Query: 62 DTHALVQDLETHGFDKTQAETIVSALTALS------NVSLDTIYKEMVTQAQQ----EIT 111
D + LV L T+ T+ E +++ L SLD I+ E + +Q E
Sbjct: 152 DYNMLVDKLNTN----TEMEEVMNDYNMLKAQNDRETQSLDVIFTERQAKEKQIRSVEEE 207
Query: 112 VQQLMAHLDAIRKDMVILEKSEFANLRAENEKMKIELDQVKQQLMHETSRIRADNKLDIN 171
++Q D I K+M + ++ ++ NEK+ ELD ++QQL S+ L+
Sbjct: 208 IEQEKQATDDIIKNMSFENQVKYLEMKTTNEKLLQELDTLQQQL---DSQNMKKESLEAE 264
Query: 172 LERSRVTDMFTDQEKQLMETTTEFTKKDTQTKSIIS--ETSNKI-------DAEIASLKT 222
+ S+V ++L E + + + KSI S E K+ + EIAS++
Sbjct: 265 IAHSQVKQEAVLLHEKLYELESHRDQMIAEDKSIGSPMEEREKLLKQIKDDNQEIASMER 324
Query: 223 LMESNK------LETIRYL 235
+ K +E IR L
Sbjct: 325 QLTDTKEKINQFIEEIRQL 343
>gi|151105229 coiled-coil domain containing 2 isoform a [Homo
sapiens]
Length = 600
Score = 37.0 bits (84), Expect = 0.017
Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 32/199 (16%)
Query: 62 DTHALVQDLETHGFDKTQAETIVSALTALS------NVSLDTIYKEMVTQAQQ----EIT 111
D + LV L T+ T+ E +++ L SLD I+ E + +Q E
Sbjct: 152 DYNMLVDKLNTN----TEMEEVMNDYNMLKAQNDRETQSLDVIFTERQAKEKQIRSVEEE 207
Query: 112 VQQLMAHLDAIRKDMVILEKSEFANLRAENEKMKIELDQVKQQLMHETSRIRADNKLDIN 171
++Q D I K+M + ++ ++ NEK+ ELD ++QQL S+ L+
Sbjct: 208 IEQEKQATDDIIKNMSFENQVKYLEMKTTNEKLLQELDTLQQQL---DSQNMKKESLEAE 264
Query: 172 LERSRVTDMFTDQEKQLMETTTEFTKKDTQTKSIIS--ETSNKI-------DAEIASLKT 222
+ S+V ++L E + + + KSI S E K+ + EIAS++
Sbjct: 265 IAHSQVKQEAVLLHEKLYELESHRDQMIAEDKSIGSPMEEREKLLKQIKDDNQEIASMER 324
Query: 223 LMESNK------LETIRYL 235
+ K +E IR L
Sbjct: 325 QLTDTKEKINQFIEEIRQL 343
>gi|143770880 laminin, beta 4 [Homo sapiens]
Length = 1761
Score = 36.6 bits (83), Expect = 0.022
Identities = 33/149 (22%), Positives = 68/149 (45%), Gaps = 24/149 (16%)
Query: 79 QAETIVSALTALSNV--SLDTIYKEMVTQAQQEITVQQLMAHLDAIRKDMVILEKSEFAN 136
+A+ A L N+ +L+ + + +TQ + T+ QL A++ I+K++
Sbjct: 1555 KAKAAEKAANILLNLDKTLNQLQQAQITQGRANSTITQLTANITKIKKNV---------- 1604
Query: 137 LRAENE--KMKIELDQVKQQ--------LMHETSRIRADNKLDINLERSRVTDMFTDQEK 186
L+AEN+ +MK EL+ KQ+ L+ + D+ ++ ++ EK
Sbjct: 1605 LQAENQTREMKSELELAKQRSGLEDGLSLLQTKLQRHQDHAVNAKVQAESAQHQAGSLEK 1664
Query: 187 QLMETTTEFT--KKDTQTKSIISETSNKI 213
+ +E ++ ++ T T + ET K+
Sbjct: 1665 EFVELKKQYAILQRKTSTTGLTKETLGKV 1693
>gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens]
Length = 2115
Score = 36.6 bits (83), Expect = 0.022
Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 17/129 (13%)
Query: 106 AQQEITVQQLMAHLDAIRKDMVILEKSEFANLRAENEK------------MKIELDQVKQ 153
A+QE T QQL A + + + +L+K+ L AE + +++ELDQ ++
Sbjct: 1417 AEQERTAQQLRAEKASYAEQLSMLKKAH--GLLAEENRGLGERANLGRQFLEVELDQARE 1474
Query: 154 QLMHETSRIRADNKLDINLERSRVTDMFTDQEKQLMETTTEFTK-KDTQTKSIISETSNK 212
+ + E + +RAD + L + T +E ++M E K K + + E K
Sbjct: 1475 KYVQELAAVRAD--AETRLAEVQREAQSTARELEVMTAKYEGAKVKVLEERQRFQEERQK 1532
Query: 213 IDAEIASLK 221
+ A++ L+
Sbjct: 1533 LTAQVEQLE 1541
>gi|42794779 myosin 18A isoform b [Homo sapiens]
Length = 2039
Score = 36.2 bits (82), Expect = 0.028
Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 14/135 (10%)
Query: 109 EITVQQLMAHLDAIRKDMVILE---------KSEFANLRAENEKMKIELDQVKQQLMHET 159
E+ ++ L +D I K LE K+E N E+++ EL + + + +
Sbjct: 1710 EVEIEDLHLQIDDIAKAKTALEEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQA 1769
Query: 160 SRIRAD-NKLDINLERSRVTDMFTDQEKQLMETTTEFTKKDTQTKSIISETSNKIDAEIA 218
SR A N L LE + ++ Q +++ EF ++ KS++S +A+I
Sbjct: 1770 SRDLAQINDLQAQLEEANKEKQELQEKLQALQSQVEFLEQSMVDKSLVSRQ----EAKIR 1825
Query: 219 SLKTLMESNKLETIR 233
L+T +E + + R
Sbjct: 1826 ELETRLEFERTQVKR 1840
Score = 30.4 bits (67), Expect = 1.6
Identities = 37/173 (21%), Positives = 71/173 (41%), Gaps = 11/173 (6%)
Query: 57 RKLTFDTHALVQDLETH-GFDKTQAETIVSALTALSNVSLDTIYKEMVTQAQQEITVQQL 115
+ L A +++LET F++TQ + + S + L +++ + +E + E ++
Sbjct: 1814 KSLVSRQEAKIRELETRLEFERTQVKRLESLASRLKE-NMEKLTEERDQRIAAENREKEQ 1872
Query: 116 MAHLDAIRKDMVILEKSEFANLRAENEKMKIELDQVKQQLMHETSRIRADNKLDINLERS 175
L +D E E A AE + K EL+ + L ++AD KL
Sbjct: 1873 NKRLQRQLRDTKE-EMGELARKEAEASRKKHELEMDLESLEAANQSLQADLKLAF----K 1927
Query: 176 RVTDMFTDQEKQLMETTTEFTKKDTQTKSIISETSNKIDAEIASLKTLMESNK 228
R+ D+ E ++ E + SE +++D +K+ + NK
Sbjct: 1928 RIGDLQAAIEDEMESDENEDLINSEGDSDVDSELEDRVD----GVKSWLSKNK 1976
>gi|28416946 myosin 18A isoform a [Homo sapiens]
Length = 2054
Score = 36.2 bits (82), Expect = 0.028
Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 14/135 (10%)
Query: 109 EITVQQLMAHLDAIRKDMVILE---------KSEFANLRAENEKMKIELDQVKQQLMHET 159
E+ ++ L +D I K LE K+E N E+++ EL + + + +
Sbjct: 1710 EVEIEDLHLQIDDIAKAKTALEEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQA 1769
Query: 160 SRIRAD-NKLDINLERSRVTDMFTDQEKQLMETTTEFTKKDTQTKSIISETSNKIDAEIA 218
SR A N L LE + ++ Q +++ EF ++ KS++S +A+I
Sbjct: 1770 SRDLAQINDLQAQLEEANKEKQELQEKLQALQSQVEFLEQSMVDKSLVSRQ----EAKIR 1825
Query: 219 SLKTLMESNKLETIR 233
L+T +E + + R
Sbjct: 1826 ELETRLEFERTQVKR 1840
Score = 35.8 bits (81), Expect = 0.037
Identities = 37/180 (20%), Positives = 82/180 (45%), Gaps = 10/180 (5%)
Query: 57 RKLTFDTHALVQDLETH-GFDKTQAETIVSALTALSNVSLDTIYKEMVTQAQQEITVQQL 115
+ L A +++LET F++TQ + + S + L +++ + +E + E ++
Sbjct: 1814 KSLVSRQEAKIRELETRLEFERTQVKRLESLASRLKE-NMEKLTEERDQRIAAENREKEQ 1872
Query: 116 MAHLDAIRKDMVILEKSEFANLRAENEKMKIELDQVKQQLMHETSRIRADNKLDI----N 171
L +D E E A AE + K EL+ + L ++AD KL +
Sbjct: 1873 NKRLQRQLRDTKE-EMGELARKEAEASRKKHELEMDLESLEAANQSLQADLKLAFKRIGD 1931
Query: 172 LERSRVTDMFTDQEKQLMETTTEFTKKDTQTKSII---SETSNKIDAEIASLKTLMESNK 228
L+ + +M +D+ + L+ + + K + K+ + S+ ++++ + +K+ + NK
Sbjct: 1932 LQAAIEDEMESDENEDLINSLQDMVTKYQKRKNKLEGDSDVDSELEDRVDGVKSWLSKNK 1991
>gi|109659847 filamin A interacting protein 1-like isoform 3 [Homo
sapiens]
Length = 1133
Score = 35.8 bits (81), Expect = 0.037
Identities = 31/135 (22%), Positives = 61/135 (45%), Gaps = 6/135 (4%)
Query: 100 KEMVTQAQQEITVQQLMAHLDAIRK--DMVILEKSEFANLRAENEKMKIELDQVKQQLMH 157
+E + ++ V++L + A+ K D K E +L+ EK ++ Q+ Q+L
Sbjct: 405 RETLQSKDFKLEVEKLSKRIMALEKLEDAFNKSKQECYSLKCNLEKERMTTKQLSQELES 464
Query: 158 ETSRIRADNKLDINLERSRVTDMFTDQEKQLMETTTEFTKKDTQTKSIISETSNKIDAEI 217
RI+ ++ LE++ T + +L T F + + +T +K+ A
Sbjct: 465 LKVRIKELEAIESRLEKTEFT--LKEDLTKLKTLTVMFVDERKTMSEKLKKTEDKLQA-- 520
Query: 218 ASLKTLMESNKLETI 232
AS + +E NK+ T+
Sbjct: 521 ASSQLQVEQNKVTTV 535
Score = 29.3 bits (64), Expect = 3.5
Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 26/132 (19%)
Query: 115 LMAHLDAIRKDMVIL-----------EKSEFANLRAENEKM-----KIELDQVKQQLMHE 158
+MA ++ +RK ++ + E+ N R E E + K+E++++ +++M
Sbjct: 368 IMAEVEELRKRVLDMEGKDEELIKMEEQCRDLNKRLERETLQSKDFKLEVEKLSKRIMAL 427
Query: 159 TSRIRADNK-------LDINLERSRVTDMFTDQEKQLMETTTEFTKKDTQTKSIISETSN 211
A NK L NLE+ R+T T Q Q +E+ K+ +S + +T
Sbjct: 428 EKLEDAFNKSKQECYSLKCNLEKERMT---TKQLSQELESLKVRIKELEAIESRLEKTEF 484
Query: 212 KIDAEIASLKTL 223
+ ++ LKTL
Sbjct: 485 TLKEDLTKLKTL 496
>gi|109659849 filamin A interacting protein 1-like isoform 2 [Homo
sapiens]
Length = 893
Score = 35.8 bits (81), Expect = 0.037
Identities = 31/135 (22%), Positives = 61/135 (45%), Gaps = 6/135 (4%)
Query: 100 KEMVTQAQQEITVQQLMAHLDAIRK--DMVILEKSEFANLRAENEKMKIELDQVKQQLMH 157
+E + ++ V++L + A+ K D K E +L+ EK ++ Q+ Q+L
Sbjct: 165 RETLQSKDFKLEVEKLSKRIMALEKLEDAFNKSKQECYSLKCNLEKERMTTKQLSQELES 224
Query: 158 ETSRIRADNKLDINLERSRVTDMFTDQEKQLMETTTEFTKKDTQTKSIISETSNKIDAEI 217
RI+ ++ LE++ T + +L T F + + +T +K+ A
Sbjct: 225 LKVRIKELEAIESRLEKTEFT--LKEDLTKLKTLTVMFVDERKTMSEKLKKTEDKLQA-- 280
Query: 218 ASLKTLMESNKLETI 232
AS + +E NK+ T+
Sbjct: 281 ASSQLQVEQNKVTTV 295
Score = 29.3 bits (64), Expect = 3.5
Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 26/132 (19%)
Query: 115 LMAHLDAIRKDMVIL-----------EKSEFANLRAENEKM-----KIELDQVKQQLMHE 158
+MA ++ +RK ++ + E+ N R E E + K+E++++ +++M
Sbjct: 128 IMAEVEELRKRVLDMEGKDEELIKMEEQCRDLNKRLERETLQSKDFKLEVEKLSKRIMAL 187
Query: 159 TSRIRADNK-------LDINLERSRVTDMFTDQEKQLMETTTEFTKKDTQTKSIISETSN 211
A NK L NLE+ R+T T Q Q +E+ K+ +S + +T
Sbjct: 188 EKLEDAFNKSKQECYSLKCNLEKERMT---TKQLSQELESLKVRIKELEAIESRLEKTEF 244
Query: 212 KIDAEIASLKTL 223
+ ++ LKTL
Sbjct: 245 TLKEDLTKLKTL 256
>gi|109659845 filamin A interacting protein 1-like isoform 1 [Homo
sapiens]
Length = 1135
Score = 35.8 bits (81), Expect = 0.037
Identities = 31/135 (22%), Positives = 61/135 (45%), Gaps = 6/135 (4%)
Query: 100 KEMVTQAQQEITVQQLMAHLDAIRK--DMVILEKSEFANLRAENEKMKIELDQVKQQLMH 157
+E + ++ V++L + A+ K D K E +L+ EK ++ Q+ Q+L
Sbjct: 405 RETLQSKDFKLEVEKLSKRIMALEKLEDAFNKSKQECYSLKCNLEKERMTTKQLSQELES 464
Query: 158 ETSRIRADNKLDINLERSRVTDMFTDQEKQLMETTTEFTKKDTQTKSIISETSNKIDAEI 217
RI+ ++ LE++ T + +L T F + + +T +K+ A
Sbjct: 465 LKVRIKELEAIESRLEKTEFT--LKEDLTKLKTLTVMFVDERKTMSEKLKKTEDKLQA-- 520
Query: 218 ASLKTLMESNKLETI 232
AS + +E NK+ T+
Sbjct: 521 ASSQLQVEQNKVTTV 535
Score = 29.3 bits (64), Expect = 3.5
Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 26/132 (19%)
Query: 115 LMAHLDAIRKDMVIL-----------EKSEFANLRAENEKM-----KIELDQVKQQLMHE 158
+MA ++ +RK ++ + E+ N R E E + K+E++++ +++M
Sbjct: 368 IMAEVEELRKRVLDMEGKDEELIKMEEQCRDLNKRLERETLQSKDFKLEVEKLSKRIMAL 427
Query: 159 TSRIRADNK-------LDINLERSRVTDMFTDQEKQLMETTTEFTKKDTQTKSIISETSN 211
A NK L NLE+ R+T T Q Q +E+ K+ +S + +T
Sbjct: 428 EKLEDAFNKSKQECYSLKCNLEKERMT---TKQLSQELESLKVRIKELEAIESRLEKTEF 484
Query: 212 KIDAEIASLKTL 223
+ ++ LKTL
Sbjct: 485 TLKEDLTKLKTL 496
>gi|198442834 coiled-coil domain containing 152 [Homo sapiens]
Length = 254
Score = 35.8 bits (81), Expect = 0.037
Identities = 28/150 (18%), Positives = 68/150 (45%), Gaps = 26/150 (17%)
Query: 108 QEITVQQLMAHLDAIRKDMVILEKSEFANLRAENEKMKIELDQVKQQL------------ 155
+E+++++ A L I K + + + NL+ ENE++KI D +K++L
Sbjct: 58 KEVSIKEECATLHNIIKGLQQTIEYQ-QNLKGENEQLKISADLIKEKLKSHEQEYKNNIA 116
Query: 156 -------------MHETSRIRADNKLDINLERSRVTDMFTDQEKQLMETTTEFTKKDTQT 202
E S++ D + + L + ++ +E ++ E + ++ +
Sbjct: 117 KLVSEMKIKEEGYKKEISKLYQDMQRKVELNEEKHKELIEKKEMEISELNAKLRSQEKEK 176
Query: 203 KSIISETSNKIDAEIASLKTLMESNKLETI 232
++ I + + DA++A ++T +S + T+
Sbjct: 177 QNEIIKLQLEFDAKLARVQTKSKSYQDSTV 206
>gi|6912236 angiopoietin-like 2 precursor [Homo sapiens]
Length = 493
Score = 35.8 bits (81), Expect = 0.037
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 95 LDTIYKEMVTQAQQEITVQQLMAHLDAIRKDMVILEKSEFANLRAENEKMKIELDQVKQQ 154
L+ + E++ Q +Q T+QQL + D I+ SE LR E+ M + Q+ Q
Sbjct: 89 LELLNNELLKQKRQIETLQQL------VEVDGGIV--SEVKLLRKESRNMNSRVTQLYMQ 140
Query: 155 LMHETSRIRADNKLDINLERSRVTDMFTD 183
L+HE R R DN L+++ +R+ + D
Sbjct: 141 LLHEIIRKR-DNALELSQLENRILNQTAD 168
>gi|15431310 keratin 14 [Homo sapiens]
Length = 472
Score = 35.4 bits (80), Expect = 0.048
Identities = 26/106 (24%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 121 AIRKDMVILEKSEFANLRAENEKMKIEL-DQVKQQLMHETSRIRADNKLDINLERSRVTD 179
A ++V KSE + LR + ++IEL Q+ + E S + + L +++ +
Sbjct: 318 ATNSELVQSGKSEISELRRTMQNLEIELQSQLSMKASLENSLEETKGRYCMQL--AQIQE 375
Query: 180 MFTDQEKQLMETTTEFTKKDTQTKSIISETSNKIDAEIASLKTLME 225
M E+QL + E +++ + K I+ + +++ EIA+ + L+E
Sbjct: 376 MIGSVEEQLAQLRCEMEQQNQEYK-ILLDVKTRLEQEIATYRRLLE 420
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 35.4 bits (80), Expect = 0.048
Identities = 29/140 (20%), Positives = 64/140 (45%), Gaps = 6/140 (4%)
Query: 95 LDTIYKEMVTQAQQEITVQQLMAHLDAIRKDMVILEKSEFANLRAENEKMKIE------L 148
L ++++ + + +QE+T + + + V LEKS+ L+ EK + E L
Sbjct: 481 LQKLHEKELARKEQELTKKLQTREREFQEQMKVALEKSQSEYLKISQEKEQQESLALEEL 540
Query: 149 DQVKQQLMHETSRIRADNKLDINLERSRVTDMFTDQEKQLMETTTEFTKKDTQTKSIISE 208
+ K+ ++ E+ D + + R+R+ ++ + EK L E + ++ ++
Sbjct: 541 ELQKKAILTESENKLRDLQQEAETYRTRILELESSLEKSLQENKNQSKDLAVHLEAEKNK 600
Query: 209 TSNKIDAEIASLKTLMESNK 228
+ +I + KT +ES K
Sbjct: 601 HNKEITVMVEKHKTELESLK 620
Score = 33.9 bits (76), Expect = 0.14
Identities = 50/187 (26%), Positives = 81/187 (43%), Gaps = 32/187 (17%)
Query: 67 VQDLETHGFDKTQAETIVSALTALSNVSLDTIYKEMVTQAQQ-----EITVQQLMAHLDA 121
V LET+ K Q E++ N + K++ QA++ EI +Q+ +
Sbjct: 1018 VSRLETN--QKEQIESLTEVHRRELNDVISIWEKKLNQQAEELQEIHEIQLQEKEQEVAE 1075
Query: 122 IRKDMVIL--EKSEFAN----LRAENEKMKIEL----DQVKQQLMHETSRIRADNKLDIN 171
+++ +++ EK E L+ E K L +Q+KQ+ H S + + KL +
Sbjct: 1076 LKQKILLFGCEKEEMNKEITWLKEEGVKQDTTLNELQEQLKQKSAHVNSLAQDETKLKAH 1135
Query: 172 LERSRVTDMFTDQEKQLMETT------TEFTKKDTQTKSIISETSNKI---DAEIASLKT 222
LE+ V D K L E T E + K +SE ++K+ D E SLK+
Sbjct: 1136 LEKLEV-----DLNKSLKENTFLQEQLVELKMLAEEDKRKVSELTSKLKTTDEEFQSLKS 1190
Query: 223 LME-SNK 228
E SNK
Sbjct: 1191 SHEKSNK 1197
Score = 32.7 bits (73), Expect = 0.31
Identities = 31/127 (24%), Positives = 59/127 (46%), Gaps = 19/127 (14%)
Query: 109 EITVQQLMAHLDAIRKDMVILEKSEFANLRAENEKMKIELDQVKQQLMHETSRIRADNKL 168
EI Q+L A D+I ++ E+ E + +N++ K+E + K + M ET +
Sbjct: 925 EILTQKLSAKEDSIH---ILNEEYE---TKFKNQEKKMEKVKQKAKEMQETLK------- 971
Query: 169 DINLERSRVTDMFTDQEKQLMETTTEFTKKDTQTKSIISETSNKIDAEIASLKTLMESNK 228
++ D +K+L T E ++K+ Q + + E + A I+ + +E+N+
Sbjct: 972 ------KKLLDQEAKLKKELENTALELSQKEKQFNAKMLEMAQANSAGISDAVSRLETNQ 1025
Query: 229 LETIRYL 235
E I L
Sbjct: 1026 KEQIESL 1032
Score = 31.2 bits (69), Expect = 0.91
Identities = 36/152 (23%), Positives = 71/152 (46%), Gaps = 21/152 (13%)
Query: 99 YKEMVT--QAQQEITVQQLMAHLDAIRK--DMVILEKSEFANLRAENEKMKIELDQVK-- 152
+KE T +++E +QL L + K D+ + EK++ + + + +L+Q K
Sbjct: 305 HKEQCTLLTSEKEALQEQLDERLQELEKIKDLHMAEKTKLITQLRDAKNLIEQLEQDKGM 364
Query: 153 -----QQLMHETSRIRADNKLDINLERSRVTDMFT------DQEKQLMETTTEFTKKDTQ 201
++ MHET ++ + +I RSR+ M T +Q+++ E +K
Sbjct: 365 VIAETKRQMHETLEMKEE---EIAQLRSRIKQMTTQGEELREQKEKSERAAFEELEKALS 421
Query: 202 TKSIISETSNKIDAEI-ASLKTLMESNKLETI 232
T E K+ AE+ +KT+ ++++ E I
Sbjct: 422 TAQKTEEARRKLKAEMDEQIKTIEKTSEEERI 453
>gi|157388975 coiled-coil domain containing 99 [Homo sapiens]
Length = 605
Score = 35.4 bits (80), Expect = 0.048
Identities = 31/146 (21%), Positives = 58/146 (39%), Gaps = 18/146 (12%)
Query: 109 EITVQQLMAHLDAIRKDMVILEKSEFANLRAENEKMKIELD-------QVKQQLMHETSR 161
E QQ HL+ + + + E L+ + EK+K+ELD Q+K Q+ H+
Sbjct: 81 EAIKQQQKMHLEKLEEQLSRSHGQEVNELKTKIEKLKVELDEARLSEKQLKHQVDHQKEL 140
Query: 162 IRADNKLDINLERSRVTDMFTDQEKQLMETTTEFTKKDTQTKSIISETS----------N 211
+ ++ ++ + RV + + + L TE T K ++E
Sbjct: 141 LSCKSE-ELRVMSERVQESMSSEMLALQIELTEMESMKTTLKEEVNELQYRQEQLELLIT 199
Query: 212 KIDAEIASLKTLMESNKLETIRYLAA 237
+ ++ LK E + E + Y A
Sbjct: 200 NLMRQVDRLKEEKEEREKEAVSYYNA 225
>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
Length = 1960
Score = 35.0 bits (79), Expect = 0.063
Identities = 44/175 (25%), Positives = 85/175 (48%), Gaps = 41/175 (23%)
Query: 78 TQAETIVSALTALSNVSLDTIYKEMVTQAQQEITVQ--QLMAHLDAIRKDM--------- 126
T+ ET+ S L A + + + QA+ E+ + +L A L A ++++
Sbjct: 869 TEMETLQSQLMA------EKLQLQEQLQAETELCAEAEELRARLTAKKQELEEICHDLEA 922
Query: 127 -VILEKSEFANLRAENEKMKIELDQVKQQLMHETS--------RIRADNKLDINLERSRV 177
V E+ +L+AE +KM+ + ++++QL E S ++ + KL LE ++
Sbjct: 923 RVEEEEERCQHLQAEKKKMQQNIQELEEQLEEEESARQKLQLEKVTTEAKLK-KLEEEQI 981
Query: 178 TDMFTDQ------EKQLMET-----TTEFTKKDTQTKSIISETSNKIDAEIASLK 221
+ DQ EK+L+E TT T+++ ++KS +++ NK +A I L+
Sbjct: 982 --ILEDQNCKLAKEKKLLEDRIAEFTTNLTEEEEKSKS-LAKLKNKHEAMITDLE 1033
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.129 0.356
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,535,509
Number of Sequences: 37866
Number of extensions: 285058
Number of successful extensions: 1691
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 204
Number of HSP's that attempted gapping in prelim test: 1489
Number of HSP's gapped (non-prelim): 400
length of query: 254
length of database: 18,247,518
effective HSP length: 100
effective length of query: 154
effective length of database: 14,460,918
effective search space: 2226981372
effective search space used: 2226981372
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.