Search of human proteins with 20149635

Search of human proteins with 20149635

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|20149635 p47 protein isoform a [Homo sapiens]
         (370 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|20149635 p47 protein isoform a [Homo sapiens]                      726   0.0  
gi|29568099 p47 protein isoform b [Homo sapiens]                      647   0.0  
gi|33286434 p47 protein isoform c [Homo sapiens]                      484   e-137
gi|117938297 UBX domain protein 2B [Homo sapiens]                     311   5e-85
gi|33457320 UBX domain containing 4 [Homo sapiens]                    147   1e-35
gi|116734689 socius isoform 3 [Homo sapiens]                           42   0.001
gi|116734681 socius isoform 1 [Homo sapiens]                           42   0.001
gi|116734679 socius isoform 2 [Homo sapiens]                           42   0.001
gi|13129078 alveolar soft part sarcoma chromosome region, candid...    41   0.002
gi|38201621 eukaryotic translation initiation factor 4 gamma, 1 ...    40   0.003
gi|38201627 eukaryotic translation initiation factor 4 gamma, 1 ...    40   0.003
gi|38201625 eukaryotic translation initiation factor 4 gamma, 1 ...    40   0.003
gi|38201623 eukaryotic translation initiation factor 4 gamma, 1 ...    40   0.003
gi|38201619 eukaryotic translation initiation factor 4 gamma, 1 ...    40   0.003
gi|118026942 zinc finger protein Cezanne [Homo sapiens]                35   0.11 
gi|20127422 Down syndrome cell adhesion molecule isoform CHD2-42...    35   0.14 
gi|149944496 UBX domain containing 7 [Homo sapiens]                    34   0.18 
gi|18702331 OTU domain containing 7A [Homo sapiens]                    34   0.18 
gi|90819237 myeloid/lymphoid or mixed-lineage leukemia (trithora...    33   0.41 
gi|90819233 myeloid/lymphoid or mixed-lineage leukemia (trithora...    33   0.41 
gi|90819231 myeloid/lymphoid or mixed-lineage leukemia (trithora...    33   0.41 
gi|24308237 phosphatidylinositol transfer protein, membrane-asso...    33   0.41 
gi|111548650 family with sequence similarity 170, member A [Homo...    33   0.41 
gi|42476272 zinc finger protein 513 [Homo sapiens]                     33   0.41 
gi|21687062 hypothetical protein LOC124402 [Homo sapiens]              33   0.41 
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom...    33   0.54 
gi|32698954 hypothetical protein LOC283991 [Homo sapiens]              33   0.54 
gi|157671951 solute carrier family 4, anion exchanger, member 3 ...    33   0.54 
gi|29725609 epidermal growth factor receptor isoform a precursor...    32   0.70 
gi|33286446 opioid growth factor receptor [Homo sapiens]               32   0.91 

>gi|20149635 p47 protein isoform a [Homo sapiens]
          Length = 370

 Score =  726 bits (1875), Expect = 0.0
 Identities = 370/370 (100%), Positives = 370/370 (100%)

Query: 1   MAAERQEALREFVAVTGAEEDRARFFLESAGWDLQIALASFYEDGGDEDIVTISQATPSS 60
           MAAERQEALREFVAVTGAEEDRARFFLESAGWDLQIALASFYEDGGDEDIVTISQATPSS
Sbjct: 1   MAAERQEALREFVAVTGAEEDRARFFLESAGWDLQIALASFYEDGGDEDIVTISQATPSS 60

Query: 61  VSRGTAPSDNRVTSFRDLIHDQDEDEEEEEGQRFYAGGSERSGQQIVGPPRKKSPNELVD 120
           VSRGTAPSDNRVTSFRDLIHDQDEDEEEEEGQRFYAGGSERSGQQIVGPPRKKSPNELVD
Sbjct: 61  VSRGTAPSDNRVTSFRDLIHDQDEDEEEEEGQRFYAGGSERSGQQIVGPPRKKSPNELVD 120

Query: 121 DLFKGAKEHGAVAVERVTKSPGETSKPRPFAGGGYRLGAAPEEESAYVAGEKRQHSSQDV 180
           DLFKGAKEHGAVAVERVTKSPGETSKPRPFAGGGYRLGAAPEEESAYVAGEKRQHSSQDV
Sbjct: 121 DLFKGAKEHGAVAVERVTKSPGETSKPRPFAGGGYRLGAAPEEESAYVAGEKRQHSSQDV 180

Query: 181 HVVLKLWKSGFSLDNGELRSYQDPSNAQFLESIRRGEVPAELRRLAHGGQVNLDMEDHRD 240
           HVVLKLWKSGFSLDNGELRSYQDPSNAQFLESIRRGEVPAELRRLAHGGQVNLDMEDHRD
Sbjct: 181 HVVLKLWKSGFSLDNGELRSYQDPSNAQFLESIRRGEVPAELRRLAHGGQVNLDMEDHRD 240

Query: 241 EDFVKPKGAFKAFTGEGQKLGSTAPQVLSTSSPAQQAENEAKASSSILIDESEPTTNIQI 300
           EDFVKPKGAFKAFTGEGQKLGSTAPQVLSTSSPAQQAENEAKASSSILIDESEPTTNIQI
Sbjct: 241 EDFVKPKGAFKAFTGEGQKLGSTAPQVLSTSSPAQQAENEAKASSSILIDESEPTTNIQI 300

Query: 301 RLADGGRLVQKFNHSHRISDIRLFIVDARPAMAATSFILMTTFPNKELADESQTLKEANL 360
           RLADGGRLVQKFNHSHRISDIRLFIVDARPAMAATSFILMTTFPNKELADESQTLKEANL
Sbjct: 301 RLADGGRLVQKFNHSHRISDIRLFIVDARPAMAATSFILMTTFPNKELADESQTLKEANL 360

Query: 361 LNAVIVQRLT 370
           LNAVIVQRLT
Sbjct: 361 LNAVIVQRLT 370


>gi|29568099 p47 protein isoform b [Homo sapiens]
          Length = 339

 Score =  647 bits (1670), Expect = 0.0
 Identities = 339/370 (91%), Positives = 339/370 (91%), Gaps = 31/370 (8%)

Query: 1   MAAERQEALREFVAVTGAEEDRARFFLESAGWDLQIALASFYEDGGDEDIVTISQATPSS 60
           MAAERQEALREFVAVTGAEEDRARFFLESAGWDLQIALASFYEDGGDEDIVTISQATPSS
Sbjct: 1   MAAERQEALREFVAVTGAEEDRARFFLESAGWDLQIALASFYEDGGDEDIVTISQATPSS 60

Query: 61  VSRGTAPSDNRVTSFRDLIHDQDEDEEEEEGQRFYAGGSERSGQQIVGPPRKKSPNELVD 120
           VSRGTAPSDNRVTSFRDLIHDQDEDEEEEEGQRFYAGGSERSGQQIVGPPRKKSPNELVD
Sbjct: 61  VSRGTAPSDNRVTSFRDLIHDQDEDEEEEEGQRFYAGGSERSGQQIVGPPRKKSPNELVD 120

Query: 121 DLFKGAKEHGAVAVERVTKSPGETSKPRPFAGGGYRLGAAPEEESAYVAGEKRQHSSQDV 180
           DLFKGAKEHGAVAVERVTKSPGETSKPR                               V
Sbjct: 121 DLFKGAKEHGAVAVERVTKSPGETSKPR-------------------------------V 149

Query: 181 HVVLKLWKSGFSLDNGELRSYQDPSNAQFLESIRRGEVPAELRRLAHGGQVNLDMEDHRD 240
           HVVLKLWKSGFSLDNGELRSYQDPSNAQFLESIRRGEVPAELRRLAHGGQVNLDMEDHRD
Sbjct: 150 HVVLKLWKSGFSLDNGELRSYQDPSNAQFLESIRRGEVPAELRRLAHGGQVNLDMEDHRD 209

Query: 241 EDFVKPKGAFKAFTGEGQKLGSTAPQVLSTSSPAQQAENEAKASSSILIDESEPTTNIQI 300
           EDFVKPKGAFKAFTGEGQKLGSTAPQVLSTSSPAQQAENEAKASSSILIDESEPTTNIQI
Sbjct: 210 EDFVKPKGAFKAFTGEGQKLGSTAPQVLSTSSPAQQAENEAKASSSILIDESEPTTNIQI 269

Query: 301 RLADGGRLVQKFNHSHRISDIRLFIVDARPAMAATSFILMTTFPNKELADESQTLKEANL 360
           RLADGGRLVQKFNHSHRISDIRLFIVDARPAMAATSFILMTTFPNKELADESQTLKEANL
Sbjct: 270 RLADGGRLVQKFNHSHRISDIRLFIVDARPAMAATSFILMTTFPNKELADESQTLKEANL 329

Query: 361 LNAVIVQRLT 370
           LNAVIVQRLT
Sbjct: 330 LNAVIVQRLT 339


>gi|33286434 p47 protein isoform c [Homo sapiens]
          Length = 259

 Score =  484 bits (1245), Expect = e-137
 Identities = 246/247 (99%), Positives = 247/247 (100%)

Query: 124 KGAKEHGAVAVERVTKSPGETSKPRPFAGGGYRLGAAPEEESAYVAGEKRQHSSQDVHVV 183
           +GAKEHGAVAVERVTKSPGETSKPRPFAGGGYRLGAAPEEESAYVAGEKRQHSSQDVHVV
Sbjct: 13  RGAKEHGAVAVERVTKSPGETSKPRPFAGGGYRLGAAPEEESAYVAGEKRQHSSQDVHVV 72

Query: 184 LKLWKSGFSLDNGELRSYQDPSNAQFLESIRRGEVPAELRRLAHGGQVNLDMEDHRDEDF 243
           LKLWKSGFSLDNGELRSYQDPSNAQFLESIRRGEVPAELRRLAHGGQVNLDMEDHRDEDF
Sbjct: 73  LKLWKSGFSLDNGELRSYQDPSNAQFLESIRRGEVPAELRRLAHGGQVNLDMEDHRDEDF 132

Query: 244 VKPKGAFKAFTGEGQKLGSTAPQVLSTSSPAQQAENEAKASSSILIDESEPTTNIQIRLA 303
           VKPKGAFKAFTGEGQKLGSTAPQVLSTSSPAQQAENEAKASSSILIDESEPTTNIQIRLA
Sbjct: 133 VKPKGAFKAFTGEGQKLGSTAPQVLSTSSPAQQAENEAKASSSILIDESEPTTNIQIRLA 192

Query: 304 DGGRLVQKFNHSHRISDIRLFIVDARPAMAATSFILMTTFPNKELADESQTLKEANLLNA 363
           DGGRLVQKFNHSHRISDIRLFIVDARPAMAATSFILMTTFPNKELADESQTLKEANLLNA
Sbjct: 193 DGGRLVQKFNHSHRISDIRLFIVDARPAMAATSFILMTTFPNKELADESQTLKEANLLNA 252

Query: 364 VIVQRLT 370
           VIVQRLT
Sbjct: 253 VIVQRLT 259


>gi|117938297 UBX domain protein 2B [Homo sapiens]
          Length = 331

 Score =  311 bits (798), Expect = 5e-85
 Identities = 171/353 (48%), Positives = 235/353 (66%), Gaps = 32/353 (9%)

Query: 17  GAEEDRARFFLESAGWDLQIALASFYEDGGDEDIVTISQATPSSVSRGTAPSDNRVTSFR 76
           G +E R+      +  DLQ+ALA  YED                 S+   P   + T F+
Sbjct: 10  GEQERRSSGPRPPSARDLQLALAELYED-----------EVKCKSSKSNRP---KATVFK 55

Query: 77  DLIHDQDEDEEEEEGQRFYAGGSERSGQQIVGPPRKKSPNELVDDLFKGAKEHGAVAVER 136
                          QRFY+   E SG  IV P    S  ++V++LFK A+EHGAV +  
Sbjct: 56  S---------PRTPPQRFYSSEHEYSGLNIVRP----STGKIVNELFKEAREHGAVPLNE 102

Query: 137 VTKSPGETSKPRPFAGGGYRLGAAPEEESAYVAGEKRQHSSQDVHVVLKLWKSGFSLDNG 196
            T++ G+  K + F GGGYRLG++  + S Y+ GE +    QDV ++LKLW +GFSLD+G
Sbjct: 103 ATRASGD-DKSKSFTGGGYRLGSSFCKRSEYIYGENQL---QDVQILLKLWSNGFSLDDG 158

Query: 197 ELRSYQDPSNAQFLESIRRGEVPAELRRLAHGGQVNLDMEDHRDEDFVKPKGAFKAFTGE 256
           ELR Y +P+NAQFLES++RGE+P EL+RL HGGQVNLDMEDH+D++++KP+  FKAF+GE
Sbjct: 159 ELRPYNEPTNAQFLESVKRGEIPLELQRLVHGGQVNLDMEDHQDQEYIKPRLRFKAFSGE 218

Query: 257 GQKLGSTAPQVLSTSSPAQQAENEAKASSSILIDESEPTTNIQIRLADGGRLVQKFNHSH 316
           GQKLGS  P+++ST S  ++ E+++  ++ +LID+S PTT IQIRLADG RL+Q+FN +H
Sbjct: 219 GQKLGSLTPEIVSTPSSPEE-EDKSILNAVVLIDDSVPTTKIQIRLADGSRLIQRFNSTH 277

Query: 317 RISDIRLFIVDARPAMAATSFILMTTFPNKELADESQTLKEANLLNAVIVQRL 369
           RI D+R FIV +RP  AA  FIL+T+FPNKEL DES TL EA++LN V++Q+L
Sbjct: 278 RILDVRNFIVQSRPEFAALDFILVTSFPNKELTDESLTLLEADILNTVLLQQL 330


>gi|33457320 UBX domain containing 4 [Homo sapiens]
          Length = 259

 Score =  147 bits (372), Expect = 1e-35
 Identities = 83/193 (43%), Positives = 129/193 (66%), Gaps = 5/193 (2%)

Query: 178 QDVHVVLKLWKSGFSLDNGELRSYQDPSNAQFLESIRRGEVPAELRRLAHGGQVNLDMED 237
           + V V +KLWK+GF++ N + RSY D ++ QFL SI++GE+P+EL+ +    +V++ +ED
Sbjct: 59  KQVDVNIKLWKNGFTV-NDDFRSYSDGASQQFLNSIKKGELPSELQGIFDKEEVDVKVED 117

Query: 238 HRDEDFVKPKGAFKAFTGEGQKLGSTAPQVLSTSSPAQQAENEAKAS-SSILIDESEPTT 296
            ++E  +  K  F+ F+G+G +LGS  P+++S    A+  E E K + S++ ++  EP T
Sbjct: 118 KKNEICLSTKPVFQPFSGQGHRLGSATPKIVSK---AKNIEVENKNNLSAVPLNNLEPIT 174

Query: 297 NIQIRLADGGRLVQKFNHSHRISDIRLFIVDARPAMAATSFILMTTFPNKELADESQTLK 356
           NIQI LA+G R+VQKFN +HR+S I+ FI   + +  +  F L T  P   L DE+ TL+
Sbjct: 175 NIQIWLANGKRIVQKFNITHRVSHIKDFIEKYQGSQRSPPFSLATALPVLRLLDETLTLE 234

Query: 357 EANLLNAVIVQRL 369
           EA+L NAVI+QRL
Sbjct: 235 EADLQNAVIIQRL 247


>gi|116734689 socius isoform 3 [Homo sapiens]
          Length = 400

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)

Query: 182 VVLKLWKSGFSLDNGELRSYQDPSNAQFLESIRRGEVPAELRRLAHGGQVNLDMEDHRDE 241
           + LKL+++G  + +G  + + DPS  + L  I  G  P+EL+RL   G V   + D R++
Sbjct: 113 IPLKLYRNGIMMFDGPFQPFYDPSTQRCLRDILDGFFPSELQRLYPNG-VPFKVSDLRNQ 171

Query: 242 DFVKPKGAFKAFTGEGQKLG 261
            ++  +     F GEG+ +G
Sbjct: 172 VYL--EDGLDPFPGEGRVVG 189


>gi|116734681 socius isoform 1 [Homo sapiens]
          Length = 487

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)

Query: 182 VVLKLWKSGFSLDNGELRSYQDPSNAQFLESIRRGEVPAELRRLAHGGQVNLDMEDHRDE 241
           + LKL+++G  + +G  + + DPS  + L  I  G  P+EL+RL   G V   + D R++
Sbjct: 200 IPLKLYRNGIMMFDGPFQPFYDPSTQRCLRDILDGFFPSELQRLYPNG-VPFKVSDLRNQ 258

Query: 242 DFVKPKGAFKAFTGEGQKLG 261
            ++  +     F GEG+ +G
Sbjct: 259 VYL--EDGLDPFPGEGRVVG 276


>gi|116734679 socius isoform 2 [Homo sapiens]
          Length = 520

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)

Query: 182 VVLKLWKSGFSLDNGELRSYQDPSNAQFLESIRRGEVPAELRRLAHGGQVNLDMEDHRDE 241
           + LKL+++G  + +G  + + DPS  + L  I  G  P+EL+RL   G V   + D R++
Sbjct: 233 IPLKLYRNGIMMFDGPFQPFYDPSTQRCLRDILDGFFPSELQRLYPNG-VPFKVSDLRNQ 291

Query: 242 DFVKPKGAFKAFTGEGQKLG 261
            ++  +     F GEG+ +G
Sbjct: 292 VYL--EDGLDPFPGEGRVVG 309


>gi|13129078 alveolar soft part sarcoma chromosome region, candidate
           1 [Homo sapiens]
          Length = 553

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 59/228 (25%), Positives = 83/228 (36%), Gaps = 21/228 (9%)

Query: 149 PFAGGGYRLGAAPEEESAYVAGEKRQHSSQDVHVVLKLWKSGFSLDNGELRSYQDPSNAQ 208
           PF+GGG RLG  P        G  R  +S    +   L   G      + +S QDP   Q
Sbjct: 244 PFSGGGQRLGGPP--------GPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQ 295

Query: 209 FLESIRRGEVPAELRRLAHGGQVNL-------DMEDHRDEDFVKPKGAFKAFTGEGQKLG 261
             E  R  +   E  R      V+        D+E+       +    F   T +  +  
Sbjct: 296 EQERERDPQQEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDDVR-- 353

Query: 262 STAPQVLSTSSPAQQAENEAKASSSILIDES---EPTTNIQIRLADGGRLVQKFNHSHRI 318
               Q+ S     ++A    KA     I E     P   +++   D   L   F  S  +
Sbjct: 354 RRLAQLKSERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETV 413

Query: 319 SDIRLFIVDARPAMAATSFILMTTFPNKELADESQTLKEANLLNAVIV 366
            D+R F V +       SF L  T P   L D +QTL +ANL  A +V
Sbjct: 414 GDLRDF-VRSHLGNPELSFYLFITPPKTVLDDHTQTLFQANLFPAALV 460


>gi|38201621 eukaryotic translation initiation factor 4 gamma, 1
           isoform 1 [Homo sapiens]
          Length = 1599

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 8/100 (8%)

Query: 51  VTISQATPS--SVSRGTAPSDNRVTSFRDLIHDQDEDEEEEEGQRFYAG--GSERSGQQI 106
           VT S A P+  S +  TAPS        ++    +E+EEEEEG+   AG   SE+ G+++
Sbjct: 428 VTASMAPPTIPSATPATAPSATSPAQEEEM----EEEEEEEEGEAGEAGEAESEKGGEEL 483

Query: 107 VGPPRKKSPNELVDDLFKGAKEHGAVAVERVTKSPGETSK 146
           + P     P  L  +L   A    AV+V +  +   E +K
Sbjct: 484 LPPESTPIPANLSQNLEAAAATQVAVSVPKRRRKIKELNK 523


>gi|38201627 eukaryotic translation initiation factor 4 gamma, 1
           isoform 2 [Homo sapiens]
          Length = 1512

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 8/100 (8%)

Query: 51  VTISQATPS--SVSRGTAPSDNRVTSFRDLIHDQDEDEEEEEGQRFYAG--GSERSGQQI 106
           VT S A P+  S +  TAPS        ++    +E+EEEEEG+   AG   SE+ G+++
Sbjct: 341 VTASMAPPTIPSATPATAPSATSPAQEEEM----EEEEEEEEGEAGEAGEAESEKGGEEL 396

Query: 107 VGPPRKKSPNELVDDLFKGAKEHGAVAVERVTKSPGETSK 146
           + P     P  L  +L   A    AV+V +  +   E +K
Sbjct: 397 LPPESTPIPANLSQNLEAAAATQVAVSVPKRRRKIKELNK 436


>gi|38201625 eukaryotic translation initiation factor 4 gamma, 1
           isoform 3 [Homo sapiens]
          Length = 1435

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 8/100 (8%)

Query: 51  VTISQATPS--SVSRGTAPSDNRVTSFRDLIHDQDEDEEEEEGQRFYAG--GSERSGQQI 106
           VT S A P+  S +  TAPS        ++    +E+EEEEEG+   AG   SE+ G+++
Sbjct: 264 VTASMAPPTIPSATPATAPSATSPAQEEEM----EEEEEEEEGEAGEAGEAESEKGGEEL 319

Query: 107 VGPPRKKSPNELVDDLFKGAKEHGAVAVERVTKSPGETSK 146
           + P     P  L  +L   A    AV+V +  +   E +K
Sbjct: 320 LPPESTPIPANLSQNLEAAAATQVAVSVPKRRRKIKELNK 359


>gi|38201623 eukaryotic translation initiation factor 4 gamma, 1
           isoform 1 [Homo sapiens]
          Length = 1599

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 8/100 (8%)

Query: 51  VTISQATPS--SVSRGTAPSDNRVTSFRDLIHDQDEDEEEEEGQRFYAG--GSERSGQQI 106
           VT S A P+  S +  TAPS        ++    +E+EEEEEG+   AG   SE+ G+++
Sbjct: 428 VTASMAPPTIPSATPATAPSATSPAQEEEM----EEEEEEEEGEAGEAGEAESEKGGEEL 483

Query: 107 VGPPRKKSPNELVDDLFKGAKEHGAVAVERVTKSPGETSK 146
           + P     P  L  +L   A    AV+V +  +   E +K
Sbjct: 484 LPPESTPIPANLSQNLEAAAATQVAVSVPKRRRKIKELNK 523


>gi|38201619 eukaryotic translation initiation factor 4 gamma, 1
           isoform 4 [Homo sapiens]
          Length = 1403

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 8/100 (8%)

Query: 51  VTISQATPS--SVSRGTAPSDNRVTSFRDLIHDQDEDEEEEEGQRFYAG--GSERSGQQI 106
           VT S A P+  S +  TAPS        ++    +E+EEEEEG+   AG   SE+ G+++
Sbjct: 232 VTASMAPPTIPSATPATAPSATSPAQEEEM----EEEEEEEEGEAGEAGEAESEKGGEEL 287

Query: 107 VGPPRKKSPNELVDDLFKGAKEHGAVAVERVTKSPGETSK 146
           + P     P  L  +L   A    AV+V +  +   E +K
Sbjct: 288 LPPESTPIPANLSQNLEAAAATQVAVSVPKRRRKIKELNK 327


>gi|118026942 zinc finger protein Cezanne [Homo sapiens]
          Length = 843

 Score = 35.0 bits (79), Expect = 0.11
 Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 7/78 (8%)

Query: 1  MAAERQEALREFVAVTGAEEDRARFFLESAGWDLQIALASFYEDGGDEDIVTISQAT-PS 59
          M  +    L +FV  TGAE   AR  LE   WD+  AL+ F      E +  +     P 
Sbjct: 1  MTLDMDAVLSDFVRSTGAEPGLARDLLEGKNWDVNAALSDF------EQLRQVHAGNLPP 54

Query: 60 SVSRGTAPSDNRVTSFRD 77
          S S G+  S      F D
Sbjct: 55 SFSEGSGGSRTPEKGFSD 72


>gi|20127422 Down syndrome cell adhesion molecule isoform CHD2-42
            precursor [Homo sapiens]
          Length = 2012

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 1/56 (1%)

Query: 47   DEDIVTISQATPSSVSRGTAPSDNRVTSFRDLIHDQDEDEEEEEGQRFYAGGSERS 102
            D+  +T+S+ T SS++    P DN  +S R  I    ED  E+ G  F    SERS
Sbjct: 1381 DQPRLTVSKTTSSSITLSWLPGDNGGSSIRGYILQYSEDNSEQWGS-FPISPSERS 1435


>gi|149944496 UBX domain containing 7 [Homo sapiens]
          Length = 489

 Score = 34.3 bits (77), Expect = 0.18
 Identities = 16/53 (30%), Positives = 31/53 (58%)

Query: 9  LREFVAVTGAEEDRARFFLESAGWDLQIALASFYEDGGDEDIVTISQATPSSV 61
          +++F  +TGA E   +  LE+   +L++A+  F + GG  +  + S A+ S+V
Sbjct: 17 IQQFTTITGASESVGKHMLEACNNNLEMAVTMFLDGGGIAEEPSTSSASVSTV 69


>gi|18702331 OTU domain containing 7A [Homo sapiens]
          Length = 926

 Score = 34.3 bits (77), Expect = 0.18
 Identities = 17/41 (41%), Positives = 21/41 (51%)

Query: 1  MAAERQEALREFVAVTGAEEDRARFFLESAGWDLQIALASF 41
          M  +    L +FV  TGAE   AR  LE   WDL  AL+ +
Sbjct: 23 MTLDMDAVLSDFVRSTGAEPGLARDLLEGKNWDLTAALSDY 63


>gi|90819237 myeloid/lymphoid or mixed-lineage leukemia (trithorax
            homolog, Drosophila); translocated to, 4 isoform 1 [Homo
            sapiens]
          Length = 1834

 Score = 33.1 bits (74), Expect = 0.41
 Identities = 37/160 (23%), Positives = 62/160 (38%), Gaps = 18/160 (11%)

Query: 45   GGDEDIVTISQATPSSVSRGTAPSDNRVTSFRDLIHDQDEDEEEEEGQRFYAGGSERSGQ 104
            GG     + + A  +SVS G   ++ +    R   +         E   F A  S    Q
Sbjct: 1183 GGKSAYASGTTAKITSVSTGNLCTEEQTPPPRPEAYPIPTQTYTREYFTFPASKS----Q 1238

Query: 105  QIVGPPRKKSPNELVDDLFKGAKEHGAVAVERVTKSPGETSKPRPFAGGGYRLGAAPEE- 163
              + PP+ + PN            H ++A++RVT+S  E  + + +    +R+ AA +  
Sbjct: 1239 DRMAPPQNQWPNYEEKPHMHTDSNHSSIAIQRVTRSQEELREDKAYQLERHRIEAAMDRK 1298

Query: 164  -------------ESAYVAGEKRQHSSQDVHVVLKLWKSG 190
                         +S+  + E   HSS+ V     L KSG
Sbjct: 1299 SDSDMWINQSSSLDSSTSSQEHLNHSSKSVTPASTLTKSG 1338


>gi|90819233 myeloid/lymphoid or mixed-lineage leukemia (trithorax
            homolog, Drosophila); translocated to, 4 isoform 2 [Homo
            sapiens]
          Length = 1651

 Score = 33.1 bits (74), Expect = 0.41
 Identities = 37/160 (23%), Positives = 62/160 (38%), Gaps = 18/160 (11%)

Query: 45   GGDEDIVTISQATPSSVSRGTAPSDNRVTSFRDLIHDQDEDEEEEEGQRFYAGGSERSGQ 104
            GG     + + A  +SVS G   ++ +    R   +         E   F A  S    Q
Sbjct: 1184 GGKSAYASGTTAKITSVSTGNLCTEEQTPPPRPEAYPIPTQTYTREYFTFPASKS----Q 1239

Query: 105  QIVGPPRKKSPNELVDDLFKGAKEHGAVAVERVTKSPGETSKPRPFAGGGYRLGAAPEE- 163
              + PP+ + PN            H ++A++RVT+S  E  + + +    +R+ AA +  
Sbjct: 1240 DRMAPPQNQWPNYEEKPHMHTDSNHSSIAIQRVTRSQEELREDKAYQLERHRIEAAMDRK 1299

Query: 164  -------------ESAYVAGEKRQHSSQDVHVVLKLWKSG 190
                         +S+  + E   HSS+ V     L KSG
Sbjct: 1300 SDSDMWINQSSSLDSSTSSQEHLNHSSKSVTPASTLTKSG 1339


>gi|90819231 myeloid/lymphoid or mixed-lineage leukemia (trithorax
            homolog, Drosophila); translocated to, 4 isoform 3 [Homo
            sapiens]
          Length = 1612

 Score = 33.1 bits (74), Expect = 0.41
 Identities = 37/160 (23%), Positives = 62/160 (38%), Gaps = 18/160 (11%)

Query: 45   GGDEDIVTISQATPSSVSRGTAPSDNRVTSFRDLIHDQDEDEEEEEGQRFYAGGSERSGQ 104
            GG     + + A  +SVS G   ++ +    R   +         E   F A  S    Q
Sbjct: 1168 GGKSAYASGTTAKITSVSTGNLCTEEQTPPPRPEAYPIPTQTYTREYFTFPASKS----Q 1223

Query: 105  QIVGPPRKKSPNELVDDLFKGAKEHGAVAVERVTKSPGETSKPRPFAGGGYRLGAAPEE- 163
              + PP+ + PN            H ++A++RVT+S  E  + + +    +R+ AA +  
Sbjct: 1224 DRMAPPQNQWPNYEEKPHMHTDSNHSSIAIQRVTRSQEELREDKAYQLERHRIEAAMDRK 1283

Query: 164  -------------ESAYVAGEKRQHSSQDVHVVLKLWKSG 190
                         +S+  + E   HSS+ V     L KSG
Sbjct: 1284 SDSDMWINQSSSLDSSTSSQEHLNHSSKSVTPASTLTKSG 1323


>gi|24308237 phosphatidylinositol transfer protein,
           membrane-associated 2 [Homo sapiens]
          Length = 1349

 Score = 33.1 bits (74), Expect = 0.41
 Identities = 48/195 (24%), Positives = 77/195 (39%), Gaps = 51/195 (26%)

Query: 54  SQATPSSVSRGTAPSDNRVTSFR--DLIHDQDEDEEEEEGQRFYAGGSERSGQQIVGPP- 110
           S  +  S  RG +PS + ++ +R   +  D DE  ++E    F+    + S  + + P  
Sbjct: 307 SSKSSRSSKRGASPSRHSISEWRMQSIARDSDESSDDE----FFDAHEDLSDTEEMFPKD 362

Query: 111 -RKKSPNELVDDLFKGAKEHGAVAVERVTKSPGETSKPRPFAGGGYRLGAAPE------- 162
             K S N+L+D +                    E+ +P     G YR G APE       
Sbjct: 363 ITKWSSNDLMDKI--------------------ESPEPEDTQDGLYRQG-APEFRVASSV 401

Query: 163 EESAYVAGEKRQHSS---QDVHVVLKLWKSGFSLDNGELRSYQDPSN--------AQFLE 211
           E+   +  E  Q  +     +HV+L +   G  LD G      DPS+        A   +
Sbjct: 402 EQLNIIEDEVSQPLAAPPSKIHVLLLVLHGGTILDTGA----GDPSSKKGDANTIANVFD 457

Query: 212 SIRRGEVPAELRRLA 226
           ++ R   P+ L RLA
Sbjct: 458 TVMRVHYPSALGRLA 472


>gi|111548650 family with sequence similarity 170, member A [Homo
           sapiens]
          Length = 329

 Score = 33.1 bits (74), Expect = 0.41
 Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 8/91 (8%)

Query: 29  SAGWDLQIALASFYEDGGDEDIVTISQATPSSVSRGTAPSDNRVTSFRDLIHDQDEDEEE 88
           +  W+ +  L S  +    E+ VT+S+     V  GT PSD    S R+L+ D +   EE
Sbjct: 140 AVSWETEETLESLEKQPRMEE-VTLSEV----VRVGTPPSD---VSTRNLLSDSEPSGEE 191

Query: 89  EEGQRFYAGGSERSGQQIVGPPRKKSPNELV 119
           +E +      S      +   PR K+P+ LV
Sbjct: 192 KEHEERTESDSLPGSPTVEDTPRAKTPDWLV 222


>gi|42476272 zinc finger protein 513 [Homo sapiens]
          Length = 541

 Score = 33.1 bits (74), Expect = 0.41
 Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 1/75 (1%)

Query: 76  RDLIHDQDEDEEEEEGQRFYAGGSERSGQQIVGPPRKKSPNELVDDLFKGAKEHGAVA-V 134
           +DL  +++E+EEE +G      G ER  +      R   P  L DD   G +   A + V
Sbjct: 42  QDLEFEEEEEEEEGDGNSDQLMGFERDSEGDSLGARPGLPYGLSDDESGGGRALSAESEV 101

Query: 135 ERVTKSPGETSKPRP 149
           E   + PGE    RP
Sbjct: 102 EEPARGPGEARGERP 116


>gi|21687062 hypothetical protein LOC124402 [Homo sapiens]
          Length = 177

 Score = 33.1 bits (74), Expect = 0.41
 Identities = 12/41 (29%), Positives = 25/41 (60%)

Query: 4  ERQEALREFVAVTGAEEDRARFFLESAGWDLQIALASFYED 44
          + Q  + +FV   G   D+A+  L++A W  + AL++F+++
Sbjct: 9  KHQVMINQFVLTAGCAADQAKQLLQAAHWQFETALSAFFQE 49


>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
            sapiens]
          Length = 1152

 Score = 32.7 bits (73), Expect = 0.54
 Identities = 36/149 (24%), Positives = 61/149 (40%), Gaps = 8/149 (5%)

Query: 83   DEDEEEEEGQRFYAGGSERSGQQIVGPPRKKSPNELVDDLFKGAKEHGAVAVERVTKSPG 142
            +E+E EEEG+    G  E  G+   G   ++   E+  ++ +G +  G    E   +   
Sbjct: 991  EEEEGEEEGEE--EGEGEEEGE---GEGEEEEEGEVEGEV-EGEEGEGEGEEEEGEEEGE 1044

Query: 143  ETSKPRPFAGGGYRLGAAPEEESAYVAGEKRQHSSQDVHVVLKLWKSGFSLDNGELRSYQ 202
            E  K               EEE  Y    + ++  QD     K+ K   S+  G+ ++YQ
Sbjct: 1045 EREKEGEGEENRRNREEEEEEEGKYQETGEEENERQDGEEYKKVSKIKGSVKYGKHKTYQ 1104

Query: 203  DPS--NAQFLESIRRGEVPAELRRLAHGG 229
              S  N Q     +R ++P + +RL   G
Sbjct: 1105 KKSVTNTQGNGKEQRSKMPVQSKRLLKNG 1133


>gi|32698954 hypothetical protein LOC283991 [Homo sapiens]
          Length = 164

 Score = 32.7 bits (73), Expect = 0.54
 Identities = 12/39 (30%), Positives = 24/39 (61%)

Query: 6  QEALREFVAVTGAEEDRARFFLESAGWDLQIALASFYED 44
          Q  + +FV   G   D+A+  L++A W  + AL++F+++
Sbjct: 11 QVMINQFVLAAGCAADQAKQLLQAAHWQFETALSTFFQE 49


>gi|157671951 solute carrier family 4, anion exchanger, member 3
           isoform 1 [Homo sapiens]
          Length = 1232

 Score = 32.7 bits (73), Expect = 0.54
 Identities = 45/189 (23%), Positives = 74/189 (39%), Gaps = 26/189 (13%)

Query: 55  QATPSSVSRGTAPSDNRVTSFRDLIHDQDEDEEEEEGQRFYAGGSERSGQQIVGPPRKKS 114
           + T +  S GT P      +  D   +++E+EEEEEG+         S  + V PP   +
Sbjct: 113 EKTSAPPSEGTPPIQEEGGAGVD---EEEEEEEEEEGE---------SEAEPVEPPPSGT 160

Query: 115 PNELVDDLFKGAKEHGAVAVERVTKSPGETSKPRPFAGGGYRLGAAPEEESAYVAGEKRQ 174
           P +    +  G+ E  +  +      PG  +  +P    G     +P+  S+  +   R 
Sbjct: 161 PQKAKFSI--GSDEDDSPGL------PGRAAVTKPLPSVGPHTDKSPQHSSS--SPSPRA 210

Query: 175 HSSQDVHVVLKLWKSGFSLDNGELRSYQDPSNAQFLESIRRGEVPAELRRLAHGGQVNL- 233
            +S+      + W    S D   LR    P +A         +VP +       G  +L 
Sbjct: 211 RASRLAGEKSRPWSPSASYD---LRERLCPGSALGNPGGPEQQVPTDEAEAQMLGSADLD 267

Query: 234 DMEDHRDED 242
           DM+ HR ED
Sbjct: 268 DMKSHRLED 276


>gi|29725609 epidermal growth factor receptor isoform a precursor
            [Homo sapiens]
          Length = 1210

 Score = 32.3 bits (72), Expect = 0.70
 Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 13/79 (16%)

Query: 201  YQDP-----SNAQFLESIRRGEVPAELRRLAHGGQ-----VNLDMEDHRDEDF---VKPK 247
            YQDP      N ++L +++   V +     AH  Q     ++LD  D++ + F    KP 
Sbjct: 1125 YQDPHSTAVGNPEYLNTVQPTCVNSTFDSPAHWAQKGSHQISLDNPDYQQDFFPKEAKPN 1184

Query: 248  GAFKAFTGEGQKLGSTAPQ 266
            G FK  T E  +    APQ
Sbjct: 1185 GIFKGSTAENAEYLRVAPQ 1203


>gi|33286446 opioid growth factor receptor [Homo sapiens]
          Length = 677

 Score = 32.0 bits (71), Expect = 0.91
 Identities = 33/125 (26%), Positives = 48/125 (38%), Gaps = 11/125 (8%)

Query: 43  EDGGDEDIVTISQATPSSVSRGTAPSDNRVTSFRDLIHDQDEDEEEEEGQRFYAGGSERS 102
           E  GD   V    A   +++   APS +         H ++  EE+ EG+     G+  S
Sbjct: 463 EGAGDSAAVASGGAQTLALAGSPAPSGHPKAG-----HSENGVEEDTEGRTGPKEGTPGS 517

Query: 103 GQQIVGP----PRKKSPNELVDDLFKGAKEHGAVAVERVTKSPGETSKPRPFAGGGYRLG 158
             +  GP    P    P E   +   G +  G  A +   +SP ET  PRP    G    
Sbjct: 518 PSETPGPSPAGPAGDEPAESPSET-PGPRPAGP-AGDEPAESPSETPGPRPAGPAGDEPA 575

Query: 159 AAPEE 163
            +P E
Sbjct: 576 ESPSE 580


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.312    0.130    0.359 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,563,104
Number of Sequences: 37866
Number of extensions: 721583
Number of successful extensions: 3001
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 2908
Number of HSP's gapped (non-prelim): 116
length of query: 370
length of database: 18,247,518
effective HSP length: 104
effective length of query: 266
effective length of database: 14,309,454
effective search space: 3806314764
effective search space used: 3806314764
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.