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Search of human proteins with 20143933
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|20143933 relaxin 2 isoform 1 preproprotein [Homo sapiens]
(185 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|20143933 relaxin 2 isoform 1 preproprotein [Homo sapiens] 372 e-103
gi|5902052 relaxin 1 preproprotein [Homo sapiens] 308 1e-84
gi|20143935 relaxin 2 isoform 2 [Homo sapiens] 145 2e-35
gi|38569396 insulin-like 6 precursor [Homo sapiens] 51 5e-07
gi|4504711 insulin-like 4 precursor [Homo sapiens] 44 8e-05
gi|18254464 relaxin 3 preproprotein [Homo sapiens] 37 0.010
gi|38569233 insulin-like 5 precursor [Homo sapiens] 33 0.11
gi|4557669 interleukin 4 receptor alpha chain isoform a precurso... 31 0.53
gi|38327535 insulin-like 3 precursor [Homo sapiens] 31 0.69
gi|215820635 protein phosphatase 1, regulatory subunit 13 like [... 30 0.91
gi|63003907 protein phosphatase 1, regulatory subunit 13 like [H... 30 0.91
gi|14210524 BCL2-related ovarian killer [Homo sapiens] 30 0.91
gi|166706897 olfactomedin 3 [Homo sapiens] 30 1.5
gi|160707881 formin 2 [Homo sapiens] 29 2.0
gi|157412263 cyclin M1 [Homo sapiens] 29 2.0
gi|45439327 periplakin [Homo sapiens] 29 2.6
gi|83367077 mucin 16 [Homo sapiens] 28 3.4
gi|157738615 coiled-coil alpha-helical rod protein 1 isoform 1 [... 28 3.4
gi|157738613 coiled-coil alpha-helical rod protein 1 isoform 2 [... 28 3.4
gi|157738611 coiled-coil alpha-helical rod protein 1 isoform 3 [... 28 3.4
gi|169213985 PREDICTED: similar to hCG2036794 [Homo sapiens] 28 4.5
gi|239751846 PREDICTED: similar to hCG2036794 [Homo sapiens] 28 4.5
gi|239746337 PREDICTED: similar to hCG2036794 [Homo sapiens] 28 4.5
gi|154426312 SPATS2-like protein isoform b [Homo sapiens] 28 5.9
gi|154426288 SPATS2-like protein isoform a [Homo sapiens] 28 5.9
gi|154426253 SPATS2-like protein isoform a [Homo sapiens] 28 5.9
gi|154426310 SPATS2-like protein isoform a [Homo sapiens] 28 5.9
gi|32698688 citron [Homo sapiens] 28 5.9
gi|4758440 glia maturation factor, gamma [Homo sapiens] 28 5.9
gi|35038601 spindle assembly abnormal protein 6 [Homo sapiens] 28 5.9
>gi|20143933 relaxin 2 isoform 1 preproprotein [Homo sapiens]
Length = 185
Score = 372 bits (954), Expect = e-103
Identities = 185/185 (100%), Positives = 185/185 (100%)
Query: 1 MPRLFFFHLLGVCLLLNQFSRAVADSWMEEVIKLCGRELVRAQIAICGMSTWSKRSLSQE 60
MPRLFFFHLLGVCLLLNQFSRAVADSWMEEVIKLCGRELVRAQIAICGMSTWSKRSLSQE
Sbjct: 1 MPRLFFFHLLGVCLLLNQFSRAVADSWMEEVIKLCGRELVRAQIAICGMSTWSKRSLSQE 60
Query: 61 DAPQTPRPVAEIVPSFINKDTETINMMSEFVANLPQELKLTLSEMQPALPQLQQHVPVLK 120
DAPQTPRPVAEIVPSFINKDTETINMMSEFVANLPQELKLTLSEMQPALPQLQQHVPVLK
Sbjct: 61 DAPQTPRPVAEIVPSFINKDTETINMMSEFVANLPQELKLTLSEMQPALPQLQQHVPVLK 120
Query: 121 DSSLLFEEFKKLIRNRQSEAADSSPSELKYLGLDTHSRKKRQLYSALANKCCHVGCTKRS 180
DSSLLFEEFKKLIRNRQSEAADSSPSELKYLGLDTHSRKKRQLYSALANKCCHVGCTKRS
Sbjct: 121 DSSLLFEEFKKLIRNRQSEAADSSPSELKYLGLDTHSRKKRQLYSALANKCCHVGCTKRS 180
Query: 181 LARFC 185
LARFC
Sbjct: 181 LARFC 185
>gi|5902052 relaxin 1 preproprotein [Homo sapiens]
Length = 185
Score = 308 bits (790), Expect = 1e-84
Identities = 152/185 (82%), Positives = 166/185 (89%)
Query: 1 MPRLFFFHLLGVCLLLNQFSRAVADSWMEEVIKLCGRELVRAQIAICGMSTWSKRSLSQE 60
MPRLF FHLL CLLLNQFSRAVA W ++VIKLCGRELVRAQIAICGMSTWSKRSLSQE
Sbjct: 1 MPRLFLFHLLEFCLLLNQFSRAVAAKWKDDVIKLCGRELVRAQIAICGMSTWSKRSLSQE 60
Query: 61 DAPQTPRPVAEIVPSFINKDTETINMMSEFVANLPQELKLTLSEMQPALPQLQQHVPVLK 120
DAPQTPRPVAEIVPSFINKDTETI +M EF+ANLP ELK LSE QP+LP+LQQ+VP LK
Sbjct: 61 DAPQTPRPVAEIVPSFINKDTETIIIMLEFIANLPPELKAALSERQPSLPELQQYVPALK 120
Query: 121 DSSLLFEEFKKLIRNRQSEAADSSPSELKYLGLDTHSRKKRQLYSALANKCCHVGCTKRS 180
DS+L FEEFKKLIRNRQSEAADS+PSELKYLGLDTHS+KKR+ Y AL KCC +GCTKRS
Sbjct: 121 DSNLSFEEFKKLIRNRQSEAADSNPSELKYLGLDTHSQKKRRPYVALFEKCCLIGCTKRS 180
Query: 181 LARFC 185
LA++C
Sbjct: 181 LAKYC 185
>gi|20143935 relaxin 2 isoform 2 [Homo sapiens]
Length = 117
Score = 145 bits (366), Expect = 2e-35
Identities = 70/70 (100%), Positives = 70/70 (100%)
Query: 1 MPRLFFFHLLGVCLLLNQFSRAVADSWMEEVIKLCGRELVRAQIAICGMSTWSKRSLSQE 60
MPRLFFFHLLGVCLLLNQFSRAVADSWMEEVIKLCGRELVRAQIAICGMSTWSKRSLSQE
Sbjct: 1 MPRLFFFHLLGVCLLLNQFSRAVADSWMEEVIKLCGRELVRAQIAICGMSTWSKRSLSQE 60
Query: 61 DAPQTPRPVA 70
DAPQTPRPVA
Sbjct: 61 DAPQTPRPVA 70
>gi|38569396 insulin-like 6 precursor [Homo sapiens]
Length = 213
Score = 51.2 bits (121), Expect = 5e-07
Identities = 58/212 (27%), Positives = 87/212 (41%), Gaps = 47/212 (22%)
Query: 1 MPRLFFFHLLGVCLLLNQFSRAVADSWMEEVIKLCGRELVRAQIAICGMSTWSKRSLSQE 60
MPRL LL + LLL +FSR ++D + KLCGR LV+ +CG + WS+ +E
Sbjct: 1 MPRLLRLSLLWLGLLLVRFSRELSD--ISSARKLCGRYLVKEIEKLCGHANWSQFRFEEE 58
Query: 61 DAPQTPRPVAEIVPSFINKDTETINMMSEFVANLPQ-----------------ELKLTLS 103
TP I + +E + S + PQ E +
Sbjct: 59 ----TP------FSRLIAQASEKVEAYSPYQFESPQTASPARGRGTNPVSTSWEEAVNSW 108
Query: 104 EMQ--PALPQLQQHVPVLK--------DSSLLFEEFKKLIRNRQSEAADSSPSELKYLGL 153
EMQ P + + P+ K + ++ E K + R+++ L L
Sbjct: 109 EMQSLPEYKDKKGYSPLGKTREFSSSHNINVYIHENAKFQKKRRNKI-----KTLSNLFW 163
Query: 154 DTHSRKKRQLYSALANKCCHVGCTKRSLARFC 185
H ++KR+ YS KCC GCTK L+ C
Sbjct: 164 GHHPQRKRRGYS---EKCCLTGCTKEELSIAC 192
>gi|4504711 insulin-like 4 precursor [Homo sapiens]
Length = 139
Score = 43.9 bits (102), Expect = 8e-05
Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
Query: 1 MPRLFFFHLLGVCLLLNQFSRAVADSWMEEVIKLCGRELVRAQIAICGMSTWSKRSLSQE 60
M LF +L + LLL+Q R +S E ++ CG + ++ C M + +
Sbjct: 1 MASLFRSYLPAIWLLLSQLLR---ESLAAE-LRGCGPRFGKHLLSYCPMPEKTFTTTPGG 56
Query: 61 DAPQTPRPVAEIVPSFINKDTETINMMSEFVANLPQELKLTLSEMQPALPQL 112
++ RP E+V + NKD + + SEF+ NL ELK LSE QP+L ++
Sbjct: 57 WLLESGRP-KEMVSTSNNKDGQALGTTSEFIPNLSPELKKPLSEGQPSLKKI 107
>gi|18254464 relaxin 3 preproprotein [Homo sapiens]
Length = 142
Score = 37.0 bits (84), Expect = 0.010
Identities = 42/185 (22%), Positives = 64/185 (34%), Gaps = 43/185 (23%)
Query: 1 MPRLFFFHLLGVCLLLNQFSRAVADSWMEEVIKLCGRELVRAQIAICGMSTWSKRSLSQE 60
M R LL V +L + ++LCGRE +RA I CG S W + +
Sbjct: 1 MARYMLLLLLAVWVLTGELWPGAEARAAPYGVRLCGREFIRAVIFTCGGSRWRRSDILAH 60
Query: 61 DAPQTPRPVAEIVPSFINKDTETINMMSEFVANLPQELKLTLSEMQPALPQLQQHVPVLK 120
+A P A+ + + + SE++A LT S PQ
Sbjct: 61 EAMGDTFPDADADEDSLAGELDEAMGSSEWLA-------LTKS------PQ--------- 98
Query: 121 DSSLLFEEFKKLIRNRQSEAADSSPSELKYLGLDTHSRKKRQLYSALANKCCHVGCTKRS 180
R R S + G R R + + L++ CC GC+K
Sbjct: 99 ----------AFYRGRPS-----------WQGTPGVLRGSRDVLAGLSSSCCKWGCSKSE 137
Query: 181 LARFC 185
++ C
Sbjct: 138 ISSLC 142
>gi|38569233 insulin-like 5 precursor [Homo sapiens]
Length = 135
Score = 33.5 bits (75), Expect = 0.11
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 22 AVADSWMEEVIKLCGRELVRAQIAICGMSTWSKRSLSQEDAPQ 64
A+++ +E ++LCG E +R I IC S W + QE PQ
Sbjct: 16 AISEVRSKESVRLCGLEYIRTVIYICASSRWRRH---QEGIPQ 55
>gi|4557669 interleukin 4 receptor alpha chain isoform a precursor
[Homo sapiens]
Length = 825
Score = 31.2 bits (69), Expect = 0.53
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 9 LLGVCLLLNQFSRAVADSWMEEVIKLCGRELVRAQIAICGMSTWSKRSLSQEDA--PQTP 66
+L VCLL + W +++ LV I S W KRS QE A P
Sbjct: 244 ILAVCLLCYVSITKIKKEWWDQIPNPARSRLVAIIIQDAQGSQWEKRSRGQEPAKCPHWK 303
Query: 67 RPVAEIVPSFI 77
+ +++P F+
Sbjct: 304 NCLTKLLPCFL 314
>gi|38327535 insulin-like 3 precursor [Homo sapiens]
Length = 131
Score = 30.8 bits (68), Expect = 0.69
Identities = 35/155 (22%), Positives = 47/155 (30%), Gaps = 59/155 (38%)
Query: 33 KLCGRELVRAQIAICGMSTWSKRSLSQEDAPQTPRPVAEIVPSFINKDTETINMMS--EF 90
KLCG VRA + +CG WS + RP D E + +
Sbjct: 32 KLCGHHFVRALVRVCGGPRWS---------TEARRPAT-------GGDRELLQWLERRHL 75
Query: 91 VANLPQELKLTLSEMQPALPQLQQHVPVLKDSSLLFEEFKKLIRNRQSEAADSSPSELKY 150
+ L + LTL LPQ H +R AA ++P
Sbjct: 76 LHGLVADSNLTLGPGLQPLPQTSHH-------------------HRHHRAAATNP----- 111
Query: 151 LGLDTHSRKKRQLYSALANKCCHVGCTKRSLARFC 185
A CC GCT++ L C
Sbjct: 112 -----------------ARYCCLSGCTQQDLLTLC 129
>gi|215820635 protein phosphatase 1, regulatory subunit 13 like
[Homo sapiens]
Length = 828
Score = 30.4 bits (67), Expect = 0.91
Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 66 PRPVAEIVPSFINKDTETINMMSEFVANLPQELKLTLSEMQPALPQLQQHVPVLKDSSLL 125
P+P E+ P + T + + V P L+ + +QPALP Q VP L++ + +
Sbjct: 454 PKPPTELEPEPEIEGLLTPVLEAGDVDEGPVARPLSPTRLQPALPPEAQSVPELEEVARV 513
Query: 126 FEEFKKLIRNRQSEAADSSPSELKYLGLDTHSRKKRQLYSALANK 170
E + ++ R S + +P+ TH ++ +Q+ S L ++
Sbjct: 514 LAEIPRPLKRRGS--MEQAPAVAL---PPTHKKQYQQIISRLFHR 553
>gi|63003907 protein phosphatase 1, regulatory subunit 13 like [Homo
sapiens]
Length = 828
Score = 30.4 bits (67), Expect = 0.91
Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 66 PRPVAEIVPSFINKDTETINMMSEFVANLPQELKLTLSEMQPALPQLQQHVPVLKDSSLL 125
P+P E+ P + T + + V P L+ + +QPALP Q VP L++ + +
Sbjct: 454 PKPPTELEPEPEIEGLLTPVLEAGDVDEGPVARPLSPTRLQPALPPEAQSVPELEEVARV 513
Query: 126 FEEFKKLIRNRQSEAADSSPSELKYLGLDTHSRKKRQLYSALANK 170
E + ++ R S + +P+ TH ++ +Q+ S L ++
Sbjct: 514 LAEIPRPLKRRGS--MEQAPAVAL---PPTHKKQYQQIISRLFHR 553
>gi|14210524 BCL2-related ovarian killer [Homo sapiens]
Length = 212
Score = 30.4 bits (67), Expect = 0.91
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 15 LLNQFSRAVADSWMEEVIKLCGRELVRAQIAICGMSTWSKRSLSQEDAPQTPRPVAEIVP 74
+++ F R+ D + K GRE V A++ G+S WS + E A P +AE+
Sbjct: 14 IMDAFDRSPTDKELVAQAKALGREYVHARLLRAGLS-WS----APERAAPVPGRLAEVCA 68
Query: 75 SFINKDTETINMMSEFVANLPQELKLTL 102
+ E + N+ ++L ++L
Sbjct: 69 VLLRLGDELEMIRPSVYRNVARQLHISL 96
>gi|166706897 olfactomedin 3 [Homo sapiens]
Length = 458
Score = 29.6 bits (65), Expect = 1.5
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 96 QELKLTLSEMQPALPQLQQHVPVLKDSSLLFEEFKKLIRN 135
QELK + E+ P +P L+Q+ K + L +FK+ IRN
Sbjct: 124 QELKEKMDELLPLIPVLEQY----KTDAKLITQFKEEIRN 159
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 29.3 bits (64), Expect = 2.0
Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 58 SQEDAPQTPRPVAEIVPSFINKDTETINMMSEFVANLPQELKLTLSEMQPALPQLQQHVP 117
SQ +TP+ ++ V E ++M SE A + Q+L+ T+ +++ + +L++ P
Sbjct: 645 SQSAVSETPQKRSDAVQK------EVVDMKSEGQATVIQQLEQTIEDLRTKIAELERQYP 698
Query: 118 VL 119
L
Sbjct: 699 AL 700
>gi|157412263 cyclin M1 [Homo sapiens]
Length = 951
Score = 29.3 bits (64), Expect = 2.0
Identities = 23/74 (31%), Positives = 33/74 (44%)
Query: 30 EVIKLCGRELVRAQIAICGMSTWSKRSLSQEDAPQTPRPVAEIVPSFINKDTETINMMSE 89
EV+ L EL Q + S + L+ A R ++ IN DTET S+
Sbjct: 853 EVVYLRMEELAFTQEEMTDFEEHSTQQLTLSPAAVPTRAASDSECCNINLDTETSPCSSD 912
Query: 90 FVANLPQELKLTLS 103
F N+ ++L TLS
Sbjct: 913 FEENVGKKLLRTLS 926
>gi|45439327 periplakin [Homo sapiens]
Length = 1756
Score = 28.9 bits (63), Expect = 2.6
Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 7/110 (6%)
Query: 73 VPSFINKDTETINMMSEFVAN---LPQELKLTLSEMQPALPQLQQHVPVLKDSSLLFEEF 129
+PS+ ++T++++ M + N L E+ E+Q QQ+ +KD L E+
Sbjct: 749 IPSYEPQETDSLSQMETKLKNQKNLLDEIASREQEVQKICANSQQYQQAVKDYELEAEKL 808
Query: 130 KKLIRNRQSEAADSSPSELKYLGLDTHSRKKRQLYSALANKCCHVGCTKR 179
+ L+ ++ S K L + + K ++ +ALA K V R
Sbjct: 809 RSLLDLENGRSSHVS----KRARLQSPATKVKEEEAALAAKFTEVYAINR 854
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 28.5 bits (62), Expect = 3.4
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 60 EDAPQTPRPVAEIVPSFINKDTETINMMSEFVANLPQELKLTLSEM 105
E +P PV ++ S + K T+ ++ SE V N P L T E+
Sbjct: 7992 ESISSSPLPVTSLLTSGLAKTTDMLHKSSEPVTNSPANLSSTSVEI 8037
>gi|157738615 coiled-coil alpha-helical rod protein 1 isoform 1
[Homo sapiens]
Length = 871
Score = 28.5 bits (62), Expect = 3.4
Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Query: 56 SLSQEDAPQTPRPVAEIVPSFINKDTETINMMSEFVANLPQELKLTLSEMQPALPQLQQH 115
+L +E+ + +P + P F K +N E V L +LK E ++ QL+
Sbjct: 395 ALQEEELTRKVQPSDSLEPEFTRKCQSLLNRWREKVFALMVQLKAQELEHSDSVKQLKGQ 454
Query: 116 VPVLKDS-SLLFEEFKKLIRNRQSEAADSSPSELKYLGL 153
V L++ + +E L R+ Q +AA+ + GL
Sbjct: 455 VASLQEKVTSQSQEQAILQRSLQDKAAEVEVERMGAKGL 493
>gi|157738613 coiled-coil alpha-helical rod protein 1 isoform 2
[Homo sapiens]
Length = 835
Score = 28.5 bits (62), Expect = 3.4
Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Query: 56 SLSQEDAPQTPRPVAEIVPSFINKDTETINMMSEFVANLPQELKLTLSEMQPALPQLQQH 115
+L +E+ + +P + P F K +N E V L +LK E ++ QL+
Sbjct: 359 ALQEEELTRKVQPSDSLEPEFTRKCQSLLNRWREKVFALMVQLKAQELEHSDSVKQLKGQ 418
Query: 116 VPVLKDS-SLLFEEFKKLIRNRQSEAADSSPSELKYLGL 153
V L++ + +E L R+ Q +AA+ + GL
Sbjct: 419 VASLQEKVTSQSQEQAILQRSLQDKAAEVEVERMGAKGL 457
>gi|157738611 coiled-coil alpha-helical rod protein 1 isoform 3
[Homo sapiens]
Length = 782
Score = 28.5 bits (62), Expect = 3.4
Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Query: 56 SLSQEDAPQTPRPVAEIVPSFINKDTETINMMSEFVANLPQELKLTLSEMQPALPQLQQH 115
+L +E+ + +P + P F K +N E V L +LK E ++ QL+
Sbjct: 306 ALQEEELTRKVQPSDSLEPEFTRKCQSLLNRWREKVFALMVQLKAQELEHSDSVKQLKGQ 365
Query: 116 VPVLKDS-SLLFEEFKKLIRNRQSEAADSSPSELKYLGL 153
V L++ + +E L R+ Q +AA+ + GL
Sbjct: 366 VASLQEKVTSQSQEQAILQRSLQDKAAEVEVERMGAKGL 404
>gi|169213985 PREDICTED: similar to hCG2036794 [Homo sapiens]
Length = 518
Score = 28.1 bits (61), Expect = 4.5
Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 5/106 (4%)
Query: 48 GMSTWSKRSLSQEDAPQTPRPVAEIVPSFINKDTETINMMSEFVANLPQELKLTLSEMQP 107
G S SKR + P TP P +P ++ +T + +F L +L+ T P
Sbjct: 47 GASENSKRDRLNPEFPGTPYPEPSKLPHTVSLETFPL----DFTEPLNPDLRETPHPESP 102
Query: 108 ALPQLQQHVPVLKDS-SLLFEEFKKLIRNRQSEAADSSPSELKYLG 152
P+ + +S + K+ SE P+E+ + G
Sbjct: 103 ETPKADSLTTSISESLDMPKTNLSKMAHPESSETPTPGPTEMPHPG 148
>gi|239751846 PREDICTED: similar to hCG2036794 [Homo sapiens]
Length = 518
Score = 28.1 bits (61), Expect = 4.5
Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 5/106 (4%)
Query: 48 GMSTWSKRSLSQEDAPQTPRPVAEIVPSFINKDTETINMMSEFVANLPQELKLTLSEMQP 107
G S SKR + P TP P +P ++ +T + +F L +L+ T P
Sbjct: 47 GASENSKRDRLNPEFPGTPYPEPSKLPHTVSLETFPL----DFTEPLNPDLRETPHPESP 102
Query: 108 ALPQLQQHVPVLKDS-SLLFEEFKKLIRNRQSEAADSSPSELKYLG 152
P+ + +S + K+ SE P+E+ + G
Sbjct: 103 ETPKADSLTTSISESLDMPKTNLSKMAHPESSETPTPGPTEMPHPG 148
>gi|239746337 PREDICTED: similar to hCG2036794 [Homo sapiens]
Length = 518
Score = 28.1 bits (61), Expect = 4.5
Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 5/106 (4%)
Query: 48 GMSTWSKRSLSQEDAPQTPRPVAEIVPSFINKDTETINMMSEFVANLPQELKLTLSEMQP 107
G S SKR + P TP P +P ++ +T + +F L +L+ T P
Sbjct: 47 GASENSKRDRLNPEFPGTPYPEPSKLPHTVSLETFPL----DFTEPLNPDLRETPHPESP 102
Query: 108 ALPQLQQHVPVLKDS-SLLFEEFKKLIRNRQSEAADSSPSELKYLG 152
P+ + +S + K+ SE P+E+ + G
Sbjct: 103 ETPKADSLTTSISESLDMPKTNLSKMAHPESSETPTPGPTEMPHPG 148
>gi|154426312 SPATS2-like protein isoform b [Homo sapiens]
Length = 489
Score = 27.7 bits (60), Expect = 5.9
Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 12/81 (14%)
Query: 35 CGRELVRAQIAICGMSTWSKRSLSQEDAPQTPRPVAEIVPSFINKDTETINMMSEF---- 90
C E ++AQI +CG T K + S P + ++P +N T S F
Sbjct: 270 CDIEQLKAQIMLCGEITHPKNNYSSR------TPCSSLLP-LLNAHAATSGKQSNFSRKS 322
Query: 91 -VANLPQELKLTLSEMQPALP 110
N P E K +M +LP
Sbjct: 323 STHNKPSEGKAANPKMVSSLP 343
>gi|154426288 SPATS2-like protein isoform a [Homo sapiens]
Length = 558
Score = 27.7 bits (60), Expect = 5.9
Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 12/81 (14%)
Query: 35 CGRELVRAQIAICGMSTWSKRSLSQEDAPQTPRPVAEIVPSFINKDTETINMMSEF---- 90
C E ++AQI +CG T K + S P + ++P +N T S F
Sbjct: 339 CDIEQLKAQIMLCGEITHPKNNYSSR------TPCSSLLP-LLNAHAATSGKQSNFSRKS 391
Query: 91 -VANLPQELKLTLSEMQPALP 110
N P E K +M +LP
Sbjct: 392 STHNKPSEGKAANPKMVSSLP 412
>gi|154426253 SPATS2-like protein isoform a [Homo sapiens]
Length = 558
Score = 27.7 bits (60), Expect = 5.9
Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 12/81 (14%)
Query: 35 CGRELVRAQIAICGMSTWSKRSLSQEDAPQTPRPVAEIVPSFINKDTETINMMSEF---- 90
C E ++AQI +CG T K + S P + ++P +N T S F
Sbjct: 339 CDIEQLKAQIMLCGEITHPKNNYSSR------TPCSSLLP-LLNAHAATSGKQSNFSRKS 391
Query: 91 -VANLPQELKLTLSEMQPALP 110
N P E K +M +LP
Sbjct: 392 STHNKPSEGKAANPKMVSSLP 412
>gi|154426310 SPATS2-like protein isoform a [Homo sapiens]
Length = 558
Score = 27.7 bits (60), Expect = 5.9
Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 12/81 (14%)
Query: 35 CGRELVRAQIAICGMSTWSKRSLSQEDAPQTPRPVAEIVPSFINKDTETINMMSEF---- 90
C E ++AQI +CG T K + S P + ++P +N T S F
Sbjct: 339 CDIEQLKAQIMLCGEITHPKNNYSSR------TPCSSLLP-LLNAHAATSGKQSNFSRKS 391
Query: 91 -VANLPQELKLTLSEMQPALP 110
N P E K +M +LP
Sbjct: 392 STHNKPSEGKAANPKMVSSLP 412
>gi|32698688 citron [Homo sapiens]
Length = 2027
Score = 27.7 bits (60), Expect = 5.9
Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 97 ELKLTLSEMQPALPQLQQHVPVLKDSSLLFEEFKKLIRNRQSEAADSSPSELKYLGLDTH 156
ELK L+E+Q +L + + + L+ + E + + E + E++ L H
Sbjct: 871 ELKRQLTELQLSLQERESQLTALQAARAALESQLRQAKTELEETTAEAEEEIQ--ALTAH 928
Query: 157 SRKKRQLYSALANKC 171
+ ++ + AL N C
Sbjct: 929 RDEIQRKFDALRNSC 943
>gi|4758440 glia maturation factor, gamma [Homo sapiens]
Length = 142
Score = 27.7 bits (60), Expect = 5.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 77 INKDTETINMMSEFVANLPQELKLTLSEMQP 107
++KD + + + EF P+ELK+ L E QP
Sbjct: 36 VDKDRQMVVLEEEFQNISPEELKMELPERQP 66
>gi|35038601 spindle assembly abnormal protein 6 [Homo sapiens]
Length = 657
Score = 27.7 bits (60), Expect = 5.9
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 105 MQPALPQLQQHVPVLKDSSLLFEEFKKLIRNRQS--EAADSSPSELKYLGLDTHSRKKRQ 162
+Q + QQH KD +L ++ ++NR S EAA+ +E KY G T K +
Sbjct: 222 LQAQVQYQQQHEQQKKDLEILHQQNIHQLQNRLSELEAANKDLTERKYKGDSTIRELKAK 281
Query: 163 L 163
L
Sbjct: 282 L 282
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.133 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,901,812
Number of Sequences: 37866
Number of extensions: 283289
Number of successful extensions: 1133
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1107
Number of HSP's gapped (non-prelim): 44
length of query: 185
length of database: 18,247,518
effective HSP length: 96
effective length of query: 89
effective length of database: 14,612,382
effective search space: 1300501998
effective search space used: 1300501998
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.