Guide to the Human Genome
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Name: SPATS2L Sequence: fasta or formatted (558aa) NCBI GI: 154426288
Description:

SPATS2-like protein isoform a

Referenced in:

Testes and Sperm

Other entries for this name:
alt mRNA [558aa] SPATS2-like protein isoform a
alt mRNA [558aa] SPATS2-like protein isoform a
alt prot [489aa] SPATS2-like protein isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         49           2
 C cysteine            1.6          9           1
 D aspartate           3.6         20           1
 E glutamate           7.9         44           2
 F phenylalanine       1.8         10           1
 G glycine             5.0         28           2
 H histidine           2.9         16           1
 I isoleucine          3.6         20           2
 K lysine             10.6         59           3
 L leucine             7.0         39           2
 M methionine          2.3         13           1
 N asparagine          6.8         38           2
 P proline             6.8         38           2
 Q glutamine           5.4         30           2
 R arginine            6.1         34           3
 S serine              9.1         51           3
 T threonine           4.1         23           2
 V valine              5.4         30           2
 W tryptophan          0.4          2           1
 Y tyrosine            0.9          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SPATS2-like protein isoform a 
SPATS2L               1.000   SPATS2-like protein isoform a 
SPATS2L               1.000   SPATS2-like protein isoform a 
SPATS2L               0.714   SPATS2-like protein isoform b 
SPATS2                0.273   spermatogenesis associated, serine-rich 2 
MYH15                 0.018   myosin, heavy polypeptide 15 
FILIP1                0.018   filamin A interacting protein 1 
PDCD11                0.017   programmed cell death 11 
NIPBL                 0.017   delangin isoform B 
NIPBL                 0.017   delangin isoform A 
CHD7                  0.015   chromodomain helicase DNA binding protein 7 
GOLGB1                0.014   golgi autoantigen, golgin subfamily b, macrogolgin ...
UACA                  0.013   uveal autoantigen with coiled-coil domains and ankyr...
UACA                  0.013   uveal autoantigen with coiled-coil domains and ankyr...
MYH6                  0.013   myosin heavy chain 6 
MIA3                  0.012   melanoma inhibitory activity family, member 3 [Homo...
TTN                   0.012   titin isoform N2-A 
TTN                   0.012   titin isoform novex-2 
TTN                   0.012   titin isoform novex-1 
TTN                   0.012   titin isoform N2-B 
PLEC1                 0.012   plectin 1 isoform 11 
PLEC1                 0.012   plectin 1 isoform 10 
PLEC1                 0.012   plectin 1 isoform 8 
PLEC1                 0.012   plectin 1 isoform 7 
PLEC1                 0.012   plectin 1 isoform 6 
PLEC1                 0.012   plectin 1 isoform 3 
PLEC1                 0.012   plectin 1 isoform 2 
PLEC1                 0.012   plectin 1 isoform 1 
CHAF1A                0.012   chromatin assembly factor 1, subunit A (p150) 
MYH9                  0.011   myosin, heavy polypeptide 9, non-muscle 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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