Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 20070186
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|20070186 phosphotriesterase related [Homo sapiens]
(349 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|47933341 phosphotriesterase related [Homo sapiens] 707 0.0
gi|20070186 phosphotriesterase related [Homo sapiens] 707 0.0
gi|11968023 zinc finger protein 106 homolog [Homo sapiens] 32 0.85
gi|46255039 RAD51-like 1 isoform 3 [Homo sapiens] 32 1.1
gi|156564386 deltex 2 isoform b [Homo sapiens] 30 3.2
gi|156564384 deltex 2 isoform a [Homo sapiens] 30 3.2
gi|156564382 deltex 2 isoform a [Homo sapiens] 30 3.2
gi|156564380 deltex 2 isoform a [Homo sapiens] 30 3.2
gi|4502813 chimerin (chimaerin) 1 isoform a [Homo sapiens] 30 3.2
gi|209364623 chimerin (chimaerin) 1 isoform b [Homo sapiens] 30 3.2
gi|19924117 RAD51-like 1 isoform 2 [Homo sapiens] 30 4.2
gi|10835029 RAD51-like 1 isoform 1 [Homo sapiens] 30 4.2
gi|148528998 Dmx-like 1 [Homo sapiens] 29 5.5
gi|40354195 keratin 18 [Homo sapiens] 29 7.2
gi|4557888 keratin 18 [Homo sapiens] 29 7.2
gi|169203021 PREDICTED: similar to Shank2E [Homo sapiens] 29 7.2
gi|239748103 PREDICTED: hypothetical protein [Homo sapiens] 29 7.2
gi|239741999 PREDICTED: hypothetical protein XP_002342370 [Homo ... 29 7.2
gi|226817313 SH3 and multiple ankyrin repeat domains 2 isoform 1... 29 7.2
gi|5802970 AFG3 ATPase family gene 3-like 2 [Homo sapiens] 29 7.2
gi|34577102 ring finger protein 14 isoform 1 [Homo sapiens] 29 7.2
gi|34577100 ring finger protein 14 isoform 1 [Homo sapiens] 29 7.2
gi|34577098 ring finger protein 14 isoform 1 [Homo sapiens] 29 7.2
gi|34577096 ring finger protein 14 isoform 2 [Homo sapiens] 29 7.2
gi|4757762 ring finger protein 14 isoform 1 [Homo sapiens] 29 7.2
gi|71037379 liver glycogen phosphorylase [Homo sapiens] 28 9.4
gi|118498352 M-phase phosphoprotein 6 [Homo sapiens] 28 9.4
>gi|47933341 phosphotriesterase related [Homo sapiens]
Length = 349
Score = 707 bits (1824), Expect = 0.0
Identities = 349/349 (100%), Positives = 349/349 (100%)
Query: 1 MSSLSGKVQTVLGLVEPSKLGRTLTHEHLAMTFDCCYCPPPPCQEAISKEPIVMKNLYWI 60
MSSLSGKVQTVLGLVEPSKLGRTLTHEHLAMTFDCCYCPPPPCQEAISKEPIVMKNLYWI
Sbjct: 1 MSSLSGKVQTVLGLVEPSKLGRTLTHEHLAMTFDCCYCPPPPCQEAISKEPIVMKNLYWI 60
Query: 61 QKNAYSHKENLQLNQETEAIKEELLYFKANGGGALVENTTTGISRDTQTLKRLAEETGVH 120
QKNAYSHKENLQLNQETEAIKEELLYFKANGGGALVENTTTGISRDTQTLKRLAEETGVH
Sbjct: 61 QKNAYSHKENLQLNQETEAIKEELLYFKANGGGALVENTTTGISRDTQTLKRLAEETGVH 120
Query: 121 IISGAGFYVDATHSSETRAMSVEQLTDVLMNEILHGADGTSIKCGIIGEIGCSWPLTESE 180
IISGAGFYVDATHSSETRAMSVEQLTDVLMNEILHGADGTSIKCGIIGEIGCSWPLTESE
Sbjct: 121 IISGAGFYVDATHSSETRAMSVEQLTDVLMNEILHGADGTSIKCGIIGEIGCSWPLTESE 180
Query: 181 RKVLQATAHAQAQLGCPVIIHPGRSSRAPFQIIRILQEAGADISKTVMSHLDRTILDKKE 240
RKVLQATAHAQAQLGCPVIIHPGRSSRAPFQIIRILQEAGADISKTVMSHLDRTILDKKE
Sbjct: 181 RKVLQATAHAQAQLGCPVIIHPGRSSRAPFQIIRILQEAGADISKTVMSHLDRTILDKKE 240
Query: 241 LLEFAQLGCYLEYDLFGTELLHYQLGPDIDMPDDNKRIRRVRLLVEEGCEDRILVAHDIH 300
LLEFAQLGCYLEYDLFGTELLHYQLGPDIDMPDDNKRIRRVRLLVEEGCEDRILVAHDIH
Sbjct: 241 LLEFAQLGCYLEYDLFGTELLHYQLGPDIDMPDDNKRIRRVRLLVEEGCEDRILVAHDIH 300
Query: 301 TKTRLMKYGGHGYSHILTNVVPKMLLRGITENVLDKILIENPKQWLTFK 349
TKTRLMKYGGHGYSHILTNVVPKMLLRGITENVLDKILIENPKQWLTFK
Sbjct: 301 TKTRLMKYGGHGYSHILTNVVPKMLLRGITENVLDKILIENPKQWLTFK 349
>gi|20070186 phosphotriesterase related [Homo sapiens]
Length = 349
Score = 707 bits (1824), Expect = 0.0
Identities = 349/349 (100%), Positives = 349/349 (100%)
Query: 1 MSSLSGKVQTVLGLVEPSKLGRTLTHEHLAMTFDCCYCPPPPCQEAISKEPIVMKNLYWI 60
MSSLSGKVQTVLGLVEPSKLGRTLTHEHLAMTFDCCYCPPPPCQEAISKEPIVMKNLYWI
Sbjct: 1 MSSLSGKVQTVLGLVEPSKLGRTLTHEHLAMTFDCCYCPPPPCQEAISKEPIVMKNLYWI 60
Query: 61 QKNAYSHKENLQLNQETEAIKEELLYFKANGGGALVENTTTGISRDTQTLKRLAEETGVH 120
QKNAYSHKENLQLNQETEAIKEELLYFKANGGGALVENTTTGISRDTQTLKRLAEETGVH
Sbjct: 61 QKNAYSHKENLQLNQETEAIKEELLYFKANGGGALVENTTTGISRDTQTLKRLAEETGVH 120
Query: 121 IISGAGFYVDATHSSETRAMSVEQLTDVLMNEILHGADGTSIKCGIIGEIGCSWPLTESE 180
IISGAGFYVDATHSSETRAMSVEQLTDVLMNEILHGADGTSIKCGIIGEIGCSWPLTESE
Sbjct: 121 IISGAGFYVDATHSSETRAMSVEQLTDVLMNEILHGADGTSIKCGIIGEIGCSWPLTESE 180
Query: 181 RKVLQATAHAQAQLGCPVIIHPGRSSRAPFQIIRILQEAGADISKTVMSHLDRTILDKKE 240
RKVLQATAHAQAQLGCPVIIHPGRSSRAPFQIIRILQEAGADISKTVMSHLDRTILDKKE
Sbjct: 181 RKVLQATAHAQAQLGCPVIIHPGRSSRAPFQIIRILQEAGADISKTVMSHLDRTILDKKE 240
Query: 241 LLEFAQLGCYLEYDLFGTELLHYQLGPDIDMPDDNKRIRRVRLLVEEGCEDRILVAHDIH 300
LLEFAQLGCYLEYDLFGTELLHYQLGPDIDMPDDNKRIRRVRLLVEEGCEDRILVAHDIH
Sbjct: 241 LLEFAQLGCYLEYDLFGTELLHYQLGPDIDMPDDNKRIRRVRLLVEEGCEDRILVAHDIH 300
Query: 301 TKTRLMKYGGHGYSHILTNVVPKMLLRGITENVLDKILIENPKQWLTFK 349
TKTRLMKYGGHGYSHILTNVVPKMLLRGITENVLDKILIENPKQWLTFK
Sbjct: 301 TKTRLMKYGGHGYSHILTNVVPKMLLRGITENVLDKILIENPKQWLTFK 349
>gi|11968023 zinc finger protein 106 homolog [Homo sapiens]
Length = 1883
Score = 32.0 bits (71), Expect = 0.85
Identities = 14/43 (32%), Positives = 26/43 (60%)
Query: 284 LVEEGCEDRILVAHDIHTKTRLMKYGGHGYSHILTNVVPKMLL 326
LV G D+ + AH+IHT + Y GH ++ + N++ K+++
Sbjct: 1712 LVFSGSSDQSVHAHNIHTGELVRIYKGHNHAVTVVNILGKVMV 1754
>gi|46255039 RAD51-like 1 isoform 3 [Homo sapiens]
Length = 384
Score = 31.6 bits (70), Expect = 1.1
Identities = 31/136 (22%), Positives = 60/136 (44%), Gaps = 13/136 (9%)
Query: 103 ISRDTQTLKRLAEETGVHIISGAGFYVDATHSSETRAMSVEQLTDVLMNEILHGADGTSI 162
++R+ +LK LAEE + +I + + ++A V D+ ++E GTS
Sbjct: 235 LAREASSLKYLAEEFSIPVILTNQITTHLSGALASQADLVSPADDLSLSE------GTSG 288
Query: 163 KCGIIGEIGCSWPLTESERKVLQATAHAQAQLGCPVIIHPGRSSRAPF-QIIRILQEAGA 221
+I +G +W + + R +LQ + Q I +S APF + ++E G
Sbjct: 289 SSCVIAALGNTWSHSVNTRLILQYLDSERRQ------ILIAKSPLAPFTSFVYTIKEEGL 342
Query: 222 DISKTVMSHLDRTILD 237
+ +T + + L+
Sbjct: 343 VLQETTFCSVTQAELN 358
>gi|156564386 deltex 2 isoform b [Homo sapiens]
Length = 575
Score = 30.0 bits (66), Expect = 3.2
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 290 EDRILVAHDIHTKTRLMK-YGGHGYS--HILTNVVPKMLLRGITENVLDK 336
E +V ++IH KT + + GHGY + L NV+ ++ +G+TE+ L++
Sbjct: 525 ETDTVVWNEIHHKTEMDRNITGHGYPDPNYLQNVLAELAAQGVTEDCLEQ 574
>gi|156564384 deltex 2 isoform a [Homo sapiens]
Length = 622
Score = 30.0 bits (66), Expect = 3.2
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 290 EDRILVAHDIHTKTRLMK-YGGHGYS--HILTNVVPKMLLRGITENVLDK 336
E +V ++IH KT + + GHGY + L NV+ ++ +G+TE+ L++
Sbjct: 572 ETDTVVWNEIHHKTEMDRNITGHGYPDPNYLQNVLAELAAQGVTEDCLEQ 621
>gi|156564382 deltex 2 isoform a [Homo sapiens]
Length = 622
Score = 30.0 bits (66), Expect = 3.2
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 290 EDRILVAHDIHTKTRLMK-YGGHGYS--HILTNVVPKMLLRGITENVLDK 336
E +V ++IH KT + + GHGY + L NV+ ++ +G+TE+ L++
Sbjct: 572 ETDTVVWNEIHHKTEMDRNITGHGYPDPNYLQNVLAELAAQGVTEDCLEQ 621
>gi|156564380 deltex 2 isoform a [Homo sapiens]
Length = 622
Score = 30.0 bits (66), Expect = 3.2
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 290 EDRILVAHDIHTKTRLMK-YGGHGYS--HILTNVVPKMLLRGITENVLDK 336
E +V ++IH KT + + GHGY + L NV+ ++ +G+TE+ L++
Sbjct: 572 ETDTVVWNEIHHKTEMDRNITGHGYPDPNYLQNVLAELAAQGVTEDCLEQ 621
>gi|4502813 chimerin (chimaerin) 1 isoform a [Homo sapiens]
Length = 459
Score = 30.0 bits (66), Expect = 3.2
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 9/89 (10%)
Query: 199 IIHPGRSSRAPFQIIRILQEAGADISKTVMSHLDRTILDKKE-LLEFAQLGCYLEYDLFG 257
I+ P + +++L A + + +M+HL R L +KE L+ LG +FG
Sbjct: 369 IMDPDEQLETLHEALKLLPPAHCETLRYLMAHLKRVTLHEKENLMNAENLGI-----VFG 423
Query: 258 TELLHYQLGPDIDMPDDNKRIRRVRLLVE 286
L+ P++D IR RL+VE
Sbjct: 424 PTLMR---SPELDAMAALNDIRYQRLVVE 449
>gi|209364623 chimerin (chimaerin) 1 isoform b [Homo sapiens]
Length = 433
Score = 30.0 bits (66), Expect = 3.2
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 9/89 (10%)
Query: 199 IIHPGRSSRAPFQIIRILQEAGADISKTVMSHLDRTILDKKE-LLEFAQLGCYLEYDLFG 257
I+ P + +++L A + + +M+HL R L +KE L+ LG +FG
Sbjct: 343 IMDPDEQLETLHEALKLLPPAHCETLRYLMAHLKRVTLHEKENLMNAENLGI-----VFG 397
Query: 258 TELLHYQLGPDIDMPDDNKRIRRVRLLVE 286
L+ P++D IR RL+VE
Sbjct: 398 PTLMR---SPELDAMAALNDIRYQRLVVE 423
>gi|19924117 RAD51-like 1 isoform 2 [Homo sapiens]
Length = 350
Score = 29.6 bits (65), Expect = 4.2
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 103 ISRDTQTLKRLAEETGVHIISGAGFYVDATHSSETRAMSVEQLTDVLMNEILHGADGTSI 162
++R+ +LK LAEE + +I + + ++A V D+ ++E GTS
Sbjct: 235 LAREASSLKYLAEEFSIPVILTNQITTHLSGALASQADLVSPADDLSLSE------GTSG 288
Query: 163 KCGIIGEIGCSWPLTESERKVLQ 185
+I +G +W + + R +LQ
Sbjct: 289 SSCVIAALGNTWSHSVNTRLILQ 311
>gi|10835029 RAD51-like 1 isoform 1 [Homo sapiens]
Length = 350
Score = 29.6 bits (65), Expect = 4.2
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 103 ISRDTQTLKRLAEETGVHIISGAGFYVDATHSSETRAMSVEQLTDVLMNEILHGADGTSI 162
++R+ +LK LAEE + +I + + ++A V D+ ++E GTS
Sbjct: 235 LAREASSLKYLAEEFSIPVILTNQITTHLSGALASQADLVSPADDLSLSE------GTSG 288
Query: 163 KCGIIGEIGCSWPLTESERKVLQ 185
+I +G +W + + R +LQ
Sbjct: 289 SSCVIAALGNTWSHSVNTRLILQ 311
>gi|148528998 Dmx-like 1 [Homo sapiens]
Length = 3027
Score = 29.3 bits (64), Expect = 5.5
Identities = 14/52 (26%), Positives = 26/52 (50%)
Query: 148 VLMNEILHGADGTSIKCGIIGEIGCSWPLTESERKVLQATAHAQAQLGCPVI 199
+L+ +D S + G+ G + + SER++ TA A + GCP++
Sbjct: 1822 LLLRRHFGSSDTFSTHMSLTGKSGLAGTINLSERRLFFTTASAHLKAGCPML 1873
>gi|40354195 keratin 18 [Homo sapiens]
Length = 430
Score = 28.9 bits (63), Expect = 7.2
Identities = 13/20 (65%), Positives = 15/20 (75%)
Query: 71 LQLNQETEAIKEELLYFKAN 90
LQL E EA+KEELL+ K N
Sbjct: 197 LQLETEIEALKEELLFMKKN 216
>gi|4557888 keratin 18 [Homo sapiens]
Length = 430
Score = 28.9 bits (63), Expect = 7.2
Identities = 13/20 (65%), Positives = 15/20 (75%)
Query: 71 LQLNQETEAIKEELLYFKAN 90
LQL E EA+KEELL+ K N
Sbjct: 197 LQLETEIEALKEELLFMKKN 216
>gi|169203021 PREDICTED: similar to Shank2E [Homo sapiens]
Length = 385
Score = 28.9 bits (63), Expect = 7.2
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 299 IHTKTRLMKYGGHGYSHILTNVVPKMLLRGITENVLDKILIENP 342
+HTKT L K H H L + KML RG+ N D E P
Sbjct: 158 LHTKTNLKKCMDH-IQHRLVEKITKMLDRGLDPNFHDPETGETP 200
>gi|239748103 PREDICTED: hypothetical protein [Homo sapiens]
Length = 366
Score = 28.9 bits (63), Expect = 7.2
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 110 LKRLAEETGVHIISGAGFYVDATHSSETRAMSVEQLTDVLMNEILHGADGTSIKCGIIGE 169
L R +E H + F V+ S E + Q VL + + G+ + C I+G
Sbjct: 177 LVRHLQEVCAHGVLFVVFVVEEASSHEDLVLLGNQADVVLGDLVGEGSTVALVGCWIVGH 236
Query: 170 IGCSWPLTESERKVLQATAHAQAQLGCP 197
S LT+ E ++LQ A AQ + P
Sbjct: 237 ---SALLTDHEDEILQEHAEAQGVIEDP 261
>gi|239741999 PREDICTED: hypothetical protein XP_002342370 [Homo
sapiens]
Length = 366
Score = 28.9 bits (63), Expect = 7.2
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 110 LKRLAEETGVHIISGAGFYVDATHSSETRAMSVEQLTDVLMNEILHGADGTSIKCGIIGE 169
L R +E H + F V+ S E + Q VL + + G+ + C I+G
Sbjct: 177 LVRHLQEVCAHGVLFVVFVVEEASSHEDLVLLGNQADVVLGDLVGEGSTVALVGCWIVGH 236
Query: 170 IGCSWPLTESERKVLQATAHAQAQLGCP 197
S LT+ E ++LQ A AQ + P
Sbjct: 237 ---SALLTDHEDEILQEHAEAQGVIEDP 261
>gi|226817313 SH3 and multiple ankyrin repeat domains 2 isoform 1
[Homo sapiens]
Length = 1849
Score = 28.9 bits (63), Expect = 7.2
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 299 IHTKTRLMKYGGHGYSHILTNVVPKMLLRGITENVLDKILIENP 342
+HTKT L K H H L + KML RG+ N D E P
Sbjct: 158 LHTKTNLKKCMDH-IQHRLVEKITKMLDRGLDPNFHDPETGETP 200
>gi|5802970 AFG3 ATPase family gene 3-like 2 [Homo sapiens]
Length = 797
Score = 28.9 bits (63), Expect = 7.2
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 213 IRILQEAGADISKTVMSHLDRTILDKKELLE------FAQLGCYLEY 253
+ +L E AD+ K + L++ +LDK +++E FA+ Y E+
Sbjct: 713 VALLTEKKADVEKVALLLLEKEVLDKNDMVELLGPRPFAEKSTYEEF 759
>gi|34577102 ring finger protein 14 isoform 1 [Homo sapiens]
Length = 474
Score = 28.9 bits (63), Expect = 7.2
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 6 GKVQTVLGLVEPSKLGRTLTHEHLAMTFDCCYCPPPPCQEAISKEP 51
G+V+ ++ ++ R L L + D YCP P CQ + +EP
Sbjct: 277 GQVKELVEAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPVMQEP 322
>gi|34577100 ring finger protein 14 isoform 1 [Homo sapiens]
Length = 474
Score = 28.9 bits (63), Expect = 7.2
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 6 GKVQTVLGLVEPSKLGRTLTHEHLAMTFDCCYCPPPPCQEAISKEP 51
G+V+ ++ ++ R L L + D YCP P CQ + +EP
Sbjct: 277 GQVKELVEAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPVMQEP 322
>gi|34577098 ring finger protein 14 isoform 1 [Homo sapiens]
Length = 474
Score = 28.9 bits (63), Expect = 7.2
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 6 GKVQTVLGLVEPSKLGRTLTHEHLAMTFDCCYCPPPPCQEAISKEP 51
G+V+ ++ ++ R L L + D YCP P CQ + +EP
Sbjct: 277 GQVKELVEAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPVMQEP 322
>gi|34577096 ring finger protein 14 isoform 2 [Homo sapiens]
Length = 348
Score = 28.9 bits (63), Expect = 7.2
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 6 GKVQTVLGLVEPSKLGRTLTHEHLAMTFDCCYCPPPPCQEAISKEP 51
G+V+ ++ ++ R L L + D YCP P CQ + +EP
Sbjct: 151 GQVKELVEAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPVMQEP 196
>gi|4757762 ring finger protein 14 isoform 1 [Homo sapiens]
Length = 474
Score = 28.9 bits (63), Expect = 7.2
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 6 GKVQTVLGLVEPSKLGRTLTHEHLAMTFDCCYCPPPPCQEAISKEP 51
G+V+ ++ ++ R L L + D YCP P CQ + +EP
Sbjct: 277 GQVKELVEAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPVMQEP 322
>gi|71037379 liver glycogen phosphorylase [Homo sapiens]
Length = 847
Score = 28.5 bits (62), Expect = 9.4
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 15/82 (18%)
Query: 272 PDDNKRIRRVRLLVEEGCEDRILVAHDIHTKTRLMKYGGH---GYSHILTNVVPKMLLRG 328
P D R+RR+ L+ EEG + RI +AH L G H G + I +++V + +
Sbjct: 420 PKDVDRLRRMSLIEEEGSK-RINMAH-------LCIVGSHAVNGVAKIHSDIVKTKVFKD 471
Query: 329 ITENVLDKILIE----NPKQWL 346
+E DK + P++WL
Sbjct: 472 FSELEPDKFQNKTNGITPRRWL 493
>gi|118498352 M-phase phosphoprotein 6 [Homo sapiens]
Length = 160
Score = 28.5 bits (62), Expect = 9.4
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 106 DTQTLKRLAEETGVHIISGAGFYVDATHSSETRAMSVEQLTDVLMNEILHG 156
D++T K+L EE IIS +Y+D E + +E+ + +L ++L+G
Sbjct: 24 DSETKKQLEEEEK-KIISEEHWYLDLPELKEKESFIIEEQSFLLCEDLLYG 73
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,267,204
Number of Sequences: 37866
Number of extensions: 554908
Number of successful extensions: 1451
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1438
Number of HSP's gapped (non-prelim): 29
length of query: 349
length of database: 18,247,518
effective HSP length: 103
effective length of query: 246
effective length of database: 14,347,320
effective search space: 3529440720
effective search space used: 3529440720
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.