Guide to the Human Genome
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Name: PTER Sequence: fasta or formatted (349aa) NCBI GI: 47933341
Description:

phosphotriesterase related

Referenced in:

Kidney
Xenobiotic Pathways

Other entries for this name:
alt mRNA [349aa] phosphotriesterase related
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         20           1
 C cysteine            2.6          9           2
 D aspartate           4.6         16           2
 E glutamate           8.0         28           2
 F phenylalanine       2.0          7           1
 G glycine             7.4         26           3
 H histidine           4.0         14           1
 I isoleucine          7.7         27           2
 K lysine              6.0         21           2
 L leucine            11.7         41           2
 M methionine          2.6          9           1
 N asparagine          3.2         11           1
 P proline             4.0         14           4
 Q glutamine           4.3         15           1
 R arginine            4.6         16           2
 S serine              5.4         19           2
 T threonine           7.2         25           3
 V valine              5.2         18           2
 W tryptophan          0.9          3           1
 Y tyrosine            2.9         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphotriesterase related 
PTER                  1.000   phosphotriesterase related 
ZFP106                0.010   zinc finger protein 106 homolog 
RAD51L1               0.010   RAD51-like 1 isoform 3 
DTX2                  0.007   deltex 2 isoform b 
DTX2                  0.007   deltex 2 isoform a 
DTX2                  0.007   deltex 2 isoform a 
DTX2                  0.007   deltex 2 isoform a 
CHN1                  0.007   chimerin (chimaerin) 1 isoform a 
CHN1                  0.007   chimerin (chimaerin) 1 isoform b 
RAD51L1               0.007   RAD51-like 1 isoform 2 
RAD51L1               0.007   RAD51-like 1 isoform 1 
DMXL1                 0.006   Dmx-like 1 
KRT18                 0.006   keratin 18 
KRT18                 0.006   keratin 18 
LOC100133890          0.006   PREDICTED: similar to Shank2E 
LOC100287203          0.006   PREDICTED: hypothetical protein 
LOC100287203          0.006   PREDICTED: hypothetical protein XP_002342370 
SHANK2                0.006   SH3 and multiple ankyrin repeat domains 2 isoform 1...
AFG3L2                0.006   AFG3 ATPase family gene 3-like 2 
RNF14                 0.006   ring finger protein 14 isoform 1 
RNF14                 0.006   ring finger protein 14 isoform 1 
RNF14                 0.006   ring finger protein 14 isoform 1 
RNF14                 0.006   ring finger protein 14 isoform 2 
RNF14                 0.006   ring finger protein 14 isoform 1 
PYGL                  0.004   liver glycogen phosphorylase 
MPHOSPH6              0.004   M-phase phosphoprotein 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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