BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|19923198 runt-related transcription factor 1 isoform AML1c [Homo sapiens] (480 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|19923198 runt-related transcription factor 1 isoform AML1c [H... 979 0.0 gi|49574546 runt-related transcription factor 1 isoform AML1b [H... 911 0.0 gi|226442791 runt-related transcription factor 2 isoform b [Homo... 578 e-165 gi|226442783 runt-related transcription factor 2 isoform a [Homo... 566 e-161 gi|66934969 runt-related transcription factor 2 isoform c [Homo ... 565 e-161 gi|72534652 runt-related transcription factor 3 isoform 1 [Homo ... 492 e-139 gi|169790837 runt-related transcription factor 1 isoform AML1a [... 479 e-135 gi|4757918 runt-related transcription factor 3 isoform 2 [Homo s... 476 e-134 gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 50 3e-06 gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 50 3e-06 gi|28558973 mediator complex subunit 14 [Homo sapiens] 46 7e-05 gi|21536357 TBP-associated factor 6 isoform delta [Homo sapiens] 42 0.002 gi|5032147 TBP-associated factor 6 isoform alpha [Homo sapiens] 42 0.002 gi|21536359 TBP-associated factor 6 isoform alpha [Homo sapiens] 42 0.002 gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo sap... 41 0.003 gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo sap... 41 0.003 gi|55750053 atrophin-1 [Homo sapiens] 41 0.003 gi|55750041 atrophin-1 [Homo sapiens] 41 0.003 gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens] 40 0.004 gi|56549668 AT rich interactive domain 2 (ARID, RFX-like) [Homo ... 39 0.010 gi|22027471 neuronal PAS domain protein 2 [Homo sapiens] 39 0.014 gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 39 0.014 gi|116284392 mucin 2 precursor [Homo sapiens] 38 0.018 gi|5454064 RNA binding motif protein 14 [Homo sapiens] 38 0.018 gi|21536355 TBP-associated factor 6 isoform gamma [Homo sapiens] 37 0.030 gi|32171215 CREB regulated transcription coactivator 2 [Homo sap... 37 0.030 gi|45827755 transforming, acidic coiled-coil containing protein ... 37 0.030 gi|13376611 zinc finger protein 703 [Homo sapiens] 37 0.040 gi|193083129 MAP/microtubule affinity-regulating kinase 3 isofor... 37 0.040 gi|46852166 MAP/microtubule affinity-regulating kinase 3 isoform... 37 0.040 >gi|19923198 runt-related transcription factor 1 isoform AML1c [Homo sapiens] Length = 480 Score = 979 bits (2530), Expect = 0.0 Identities = 480/480 (100%), Positives = 480/480 (100%) Query: 1 MASDSIFESFPSYPQCFMRECILGMNPSRDVHDASTSRRFTPPSTALSPGKMSEALPLGA 60 MASDSIFESFPSYPQCFMRECILGMNPSRDVHDASTSRRFTPPSTALSPGKMSEALPLGA Sbjct: 1 MASDSIFESFPSYPQCFMRECILGMNPSRDVHDASTSRRFTPPSTALSPGKMSEALPLGA 60 Query: 61 PDAGAALAGKLRSGDRSMVEVLADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVA 120 PDAGAALAGKLRSGDRSMVEVLADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVA Sbjct: 61 PDAGAALAGKLRSGDRSMVEVLADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVA 120 Query: 121 LGDVPDGTLVTVMAGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVF 180 LGDVPDGTLVTVMAGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVF Sbjct: 121 LGDVPDGTLVTVMAGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVF 180 Query: 181 TNPPQVATYHRAIKITVDGPREPRRHRQKLDDQTKPGSLSFSERLSELEQLRRTAMRVSP 240 TNPPQVATYHRAIKITVDGPREPRRHRQKLDDQTKPGSLSFSERLSELEQLRRTAMRVSP Sbjct: 181 TNPPQVATYHRAIKITVDGPREPRRHRQKLDDQTKPGSLSFSERLSELEQLRRTAMRVSP 240 Query: 241 HHPAPTPNPRASLNHSTAFNPQPQSQMQDTRQIQPSPPWSYDQSYQYLGSIASPSVHPAT 300 HHPAPTPNPRASLNHSTAFNPQPQSQMQDTRQIQPSPPWSYDQSYQYLGSIASPSVHPAT Sbjct: 241 HHPAPTPNPRASLNHSTAFNPQPQSQMQDTRQIQPSPPWSYDQSYQYLGSIASPSVHPAT 300 Query: 301 PISPGRASGMTTLSAELSSRLSTAPDLTAFSDPRQFPALPSISDPRMHYPGAFTYSPTPV 360 PISPGRASGMTTLSAELSSRLSTAPDLTAFSDPRQFPALPSISDPRMHYPGAFTYSPTPV Sbjct: 301 PISPGRASGMTTLSAELSSRLSTAPDLTAFSDPRQFPALPSISDPRMHYPGAFTYSPTPV 360 Query: 361 TSGIGIGMSAMGSATRYHTYLPPPYPGSSQAQGGPFQASSPSYHLYYGASAGSYQFSMVG 420 TSGIGIGMSAMGSATRYHTYLPPPYPGSSQAQGGPFQASSPSYHLYYGASAGSYQFSMVG Sbjct: 361 TSGIGIGMSAMGSATRYHTYLPPPYPGSSQAQGGPFQASSPSYHLYYGASAGSYQFSMVG 420 Query: 421 GERSPPRILPPCTNASTGSALLNPSLPNQSDVVEAEGSHSNSPTNMAPSARLEEAVWRPY 480 GERSPPRILPPCTNASTGSALLNPSLPNQSDVVEAEGSHSNSPTNMAPSARLEEAVWRPY Sbjct: 421 GERSPPRILPPCTNASTGSALLNPSLPNQSDVVEAEGSHSNSPTNMAPSARLEEAVWRPY 480 >gi|49574546 runt-related transcription factor 1 isoform AML1b [Homo sapiens] Length = 453 Score = 911 bits (2354), Expect = 0.0 Identities = 448/448 (100%), Positives = 448/448 (100%) Query: 33 DASTSRRFTPPSTALSPGKMSEALPLGAPDAGAALAGKLRSGDRSMVEVLADHPGELVRT 92 DASTSRRFTPPSTALSPGKMSEALPLGAPDAGAALAGKLRSGDRSMVEVLADHPGELVRT Sbjct: 6 DASTSRRFTPPSTALSPGKMSEALPLGAPDAGAALAGKLRSGDRSMVEVLADHPGELVRT 65 Query: 93 DSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAELRNATAAMK 152 DSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAELRNATAAMK Sbjct: 66 DSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAELRNATAAMK 125 Query: 153 NQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPRRHRQKLDD 212 NQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPRRHRQKLDD Sbjct: 126 NQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPRRHRQKLDD 185 Query: 213 QTKPGSLSFSERLSELEQLRRTAMRVSPHHPAPTPNPRASLNHSTAFNPQPQSQMQDTRQ 272 QTKPGSLSFSERLSELEQLRRTAMRVSPHHPAPTPNPRASLNHSTAFNPQPQSQMQDTRQ Sbjct: 186 QTKPGSLSFSERLSELEQLRRTAMRVSPHHPAPTPNPRASLNHSTAFNPQPQSQMQDTRQ 245 Query: 273 IQPSPPWSYDQSYQYLGSIASPSVHPATPISPGRASGMTTLSAELSSRLSTAPDLTAFSD 332 IQPSPPWSYDQSYQYLGSIASPSVHPATPISPGRASGMTTLSAELSSRLSTAPDLTAFSD Sbjct: 246 IQPSPPWSYDQSYQYLGSIASPSVHPATPISPGRASGMTTLSAELSSRLSTAPDLTAFSD 305 Query: 333 PRQFPALPSISDPRMHYPGAFTYSPTPVTSGIGIGMSAMGSATRYHTYLPPPYPGSSQAQ 392 PRQFPALPSISDPRMHYPGAFTYSPTPVTSGIGIGMSAMGSATRYHTYLPPPYPGSSQAQ Sbjct: 306 PRQFPALPSISDPRMHYPGAFTYSPTPVTSGIGIGMSAMGSATRYHTYLPPPYPGSSQAQ 365 Query: 393 GGPFQASSPSYHLYYGASAGSYQFSMVGGERSPPRILPPCTNASTGSALLNPSLPNQSDV 452 GGPFQASSPSYHLYYGASAGSYQFSMVGGERSPPRILPPCTNASTGSALLNPSLPNQSDV Sbjct: 366 GGPFQASSPSYHLYYGASAGSYQFSMVGGERSPPRILPPCTNASTGSALLNPSLPNQSDV 425 Query: 453 VEAEGSHSNSPTNMAPSARLEEAVWRPY 480 VEAEGSHSNSPTNMAPSARLEEAVWRPY Sbjct: 426 VEAEGSHSNSPTNMAPSARLEEAVWRPY 453 >gi|226442791 runt-related transcription factor 2 isoform b [Homo sapiens] Length = 499 Score = 578 bits (1491), Expect = e-165 Identities = 314/525 (59%), Positives = 373/525 (71%), Gaps = 71/525 (13%) Query: 1 MASDSIFESFPSYPQCFMRECILGMNPSRDVHDASTSRRFTPPSTALSPGKMSEALPL-- 58 MAS+S+F + Q F D STSRRF+PPS++L PGKMS+ P+ Sbjct: 1 MASNSLFSTVTPCQQNFF-------------WDPSTSRRFSPPSSSLQPGKMSDVSPVVA 47 Query: 59 ---------------------------------GAPDAGAALAGKLRS--GDRSMVEVLA 83 A A AA +LR +R+MVE++A Sbjct: 48 AQQQQQQQQQQQQQQQQQQQQQQQEAAAAAAAAAAAAAAAAAVPRLRPPHDNRTMVEIIA 107 Query: 84 DHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAE 143 DHP ELVRTDSPNFLCSVLP+HWRCNKTLP+AFKVVALG+VPDGT+VTVMAGNDENYSAE Sbjct: 108 DHPAELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGEVPDGTVVTVMAGNDENYSAE 167 Query: 144 LRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREP 203 LRNA+A MKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIK+TVDGPREP Sbjct: 168 LRNASAVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKVTVDGPREP 227 Query: 204 RRHRQKLDDQTKPGSLSFSERLSELEQLRRTAMRVSPHHPAPTPNPRASLNHS-TAFNPQ 262 RRHRQKLDD +KP FS+RLS+L ++ +MRV P NPR SLN + + FNPQ Sbjct: 228 RRHRQKLDD-SKPS--LFSDRLSDLGRIPHPSMRVG----VPPQNPRPSLNSAPSPFNPQ 280 Query: 263 PQSQMQDTRQIQPSPPWSYDQSY-QYLGSIASPSVHPATPISPGRASGMTTLSAELSSRL 321 QSQ+ D RQ Q SPPWSYDQSY YL + SPS+H TP+S R +G+ ++ ++ R+ Sbjct: 281 GQSQITDPRQAQSSPPWSYDQSYPSYLSQMTSPSIHSTTPLSSTRGTGLPAIT-DVPRRI 339 Query: 322 STAPDLTAFSDPRQFPALPSI-----SDPRMHYPGAFTYSPTPVTSGIGIGMSAMGSATR 376 S A +L FSDPRQFP++ S+ S+PRMHYP FTY+P PVTSG+ +GMSA T Sbjct: 340 SGASELGPFSDPRQFPSISSLTESRFSNPRMHYPATFTYTP-PVTSGMSLGMSA---TTH 395 Query: 377 YHTYLPPPYPGSSQAQGGPFQASSPSYHLYYGASAGSYQFSMV-GGERSPPRILPPCTNA 435 YHTYLPPPYPGSSQ+Q GPFQ SS Y LYYG S+GSYQF MV GG+RSP R+LPPCT Sbjct: 396 YHTYLPPPYPGSSQSQSGPFQTSSTPY-LYYGTSSGSYQFPMVPGGDRSPSRMLPPCTTT 454 Query: 436 STGSALLNPSLPNQSDVVEAEGSHSNSPTNMAPSARLEEAVWRPY 480 S GS LLNP+LPNQ+D V+A+GSHS+SPT + S R++E+VWRPY Sbjct: 455 SNGSTLLNPNLPNQNDGVDADGSHSSSPTVLNSSGRMDESVWRPY 499 >gi|226442783 runt-related transcription factor 2 isoform a [Homo sapiens] Length = 521 Score = 566 bits (1459), Expect = e-161 Identities = 314/547 (57%), Positives = 373/547 (68%), Gaps = 93/547 (17%) Query: 1 MASDSIFESFPSYPQCFMRECILGMNPSRDVHDASTSRRFTPPSTALSPGKMSEALPL-- 58 MAS+S+F + Q F D STSRRF+PPS++L PGKMS+ P+ Sbjct: 1 MASNSLFSTVTPCQQNFF-------------WDPSTSRRFSPPSSSLQPGKMSDVSPVVA 47 Query: 59 ---------------------------------GAPDAGAALAGKLRS--GDRSMVEVLA 83 A A AA +LR +R+MVE++A Sbjct: 48 AQQQQQQQQQQQQQQQQQQQQQQQEAAAAAAAAAAAAAAAAAVPRLRPPHDNRTMVEIIA 107 Query: 84 DHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAE 143 DHP ELVRTDSPNFLCSVLP+HWRCNKTLP+AFKVVALG+VPDGT+VTVMAGNDENYSAE Sbjct: 108 DHPAELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGEVPDGTVVTVMAGNDENYSAE 167 Query: 144 LRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREP 203 LRNA+A MKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIK+TVDGPREP Sbjct: 168 LRNASAVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKVTVDGPREP 227 Query: 204 RRHRQKLDDQTKPGSLSFSERLSELEQLRRTAMRVSPHHPAPTPNPRASLNHS-TAFNPQ 262 RRHRQKLDD +KP FS+RLS+L ++ +MRV P NPR SLN + + FNPQ Sbjct: 228 RRHRQKLDD-SKPS--LFSDRLSDLGRIPHPSMRVG----VPPQNPRPSLNSAPSPFNPQ 280 Query: 263 PQSQMQDTRQIQPSPPWSYDQSY-QYLGSIASPSVHPATPISPGRASGMTTLSAELSSRL 321 QSQ+ D RQ Q SPPWSYDQSY YL + SPS+H TP+S R +G+ ++ ++ R+ Sbjct: 281 GQSQITDPRQAQSSPPWSYDQSYPSYLSQMTSPSIHSTTPLSSTRGTGLPAIT-DVPRRI 339 Query: 322 ST----------------------APDLTAFSDPRQFPALPSI-----SDPRMHYPGAFT 354 S A +L FSDPRQFP++ S+ S+PRMHYP FT Sbjct: 340 SDDDTATSDFCLWPSTLSKKSQAGASELGPFSDPRQFPSISSLTESRFSNPRMHYPATFT 399 Query: 355 YSPTPVTSGIGIGMSAMGSATRYHTYLPPPYPGSSQAQGGPFQASSPSYHLYYGASAGSY 414 Y+P PVTSG+ +GMSA T YHTYLPPPYPGSSQ+Q GPFQ SS Y LYYG S+GSY Sbjct: 400 YTP-PVTSGMSLGMSA---TTHYHTYLPPPYPGSSQSQSGPFQTSSTPY-LYYGTSSGSY 454 Query: 415 QFSMV-GGERSPPRILPPCTNASTGSALLNPSLPNQSDVVEAEGSHSNSPTNMAPSARLE 473 QF MV GG+RSP R+LPPCT S GS LLNP+LPNQ+D V+A+GSHS+SPT + S R++ Sbjct: 455 QFPMVPGGDRSPSRMLPPCTTTSNGSTLLNPNLPNQNDGVDADGSHSSSPTVLNSSGRMD 514 Query: 474 EAVWRPY 480 E+VWRPY Sbjct: 515 ESVWRPY 521 >gi|66934969 runt-related transcription factor 2 isoform c [Homo sapiens] Length = 507 Score = 565 bits (1456), Expect = e-161 Identities = 307/515 (59%), Positives = 363/515 (70%), Gaps = 80/515 (15%) Query: 33 DASTSRRFTPPSTALSPGKMSEALPL---------------------------------- 58 D STSRRF+PPS++L PGKMS+ P+ Sbjct: 6 DPSTSRRFSPPSSSLQPGKMSDVSPVVAAQQQQQQQQQQQQQQQQQQQQQQQEAAAAAAA 65 Query: 59 -GAPDAGAALAGKLRS--GDRSMVEVLADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIA 115 A A AA +LR +R+MVE++ADHP ELVRTDSPNFLCSVLP+HWRCNKTLP+A Sbjct: 66 AAAAAAAAAAVPRLRPPHDNRTMVEIIADHPAELVRTDSPNFLCSVLPSHWRCNKTLPVA 125 Query: 116 FKVVALGDVPDGTLVTVMAGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRGKSFTL 175 FKVVALG+VPDGT+VTVMAGNDENYSAELRNA+A MKNQVARFNDLRFVGRSGRGKSFTL Sbjct: 126 FKVVALGEVPDGTVVTVMAGNDENYSAELRNASAVMKNQVARFNDLRFVGRSGRGKSFTL 185 Query: 176 TITVFTNPPQVATYHRAIKITVDGPREPRRHRQKLDDQTKPGSLSFSERLSELEQLRRTA 235 TITVFTNPPQVATYHRAIK+TVDGPREPRRHRQKLDD +KP FS+RLS+L ++ + Sbjct: 186 TITVFTNPPQVATYHRAIKVTVDGPREPRRHRQKLDD-SKPS--LFSDRLSDLGRIPHPS 242 Query: 236 MRVSPHHPAPTPNPRASLNHS-TAFNPQPQSQMQDTRQIQPSPPWSYDQSY-QYLGSIAS 293 MRV P NPR SLN + + FNPQ QSQ+ D RQ Q SPPWSYDQSY YL + S Sbjct: 243 MRVG----VPPQNPRPSLNSAPSPFNPQGQSQITDPRQAQSSPPWSYDQSYPSYLSQMTS 298 Query: 294 PSVHPATPISPGRASGMTTLSAELSSRLST----------------------APDLTAFS 331 PS+H TP+S R +G+ ++ ++ R+S A +L FS Sbjct: 299 PSIHSTTPLSSTRGTGLPAIT-DVPRRISDDDTATSDFCLWPSTLSKKSQAGASELGPFS 357 Query: 332 DPRQFPALPSI-----SDPRMHYPGAFTYSPTPVTSGIGIGMSAMGSATRYHTYLPPPYP 386 DPRQFP++ S+ S+PRMHYP FTY+P PVTSG+ +GMSA T YHTYLPPPYP Sbjct: 358 DPRQFPSISSLTESRFSNPRMHYPATFTYTP-PVTSGMSLGMSA---TTHYHTYLPPPYP 413 Query: 387 GSSQAQGGPFQASSPSYHLYYGASAGSYQFSMV-GGERSPPRILPPCTNASTGSALLNPS 445 GSSQ+Q GPFQ SS Y LYYG S+GSYQF MV GG+RSP R+LPPCT S GS LLNP+ Sbjct: 414 GSSQSQSGPFQTSSTPY-LYYGTSSGSYQFPMVPGGDRSPSRMLPPCTTTSNGSTLLNPN 472 Query: 446 LPNQSDVVEAEGSHSNSPTNMAPSARLEEAVWRPY 480 LPNQ+D V+A+GSHS+SPT + S R++E+VWRPY Sbjct: 473 LPNQNDGVDADGSHSSSPTVLNSSGRMDESVWRPY 507 >gi|72534652 runt-related transcription factor 3 isoform 1 [Homo sapiens] Length = 429 Score = 492 bits (1266), Expect = e-139 Identities = 282/499 (56%), Positives = 332/499 (66%), Gaps = 89/499 (17%) Query: 1 MASDSIFESFPSYPQCFMRECILGMNPSRDVHDASTSRRFTPPSTAL----SPGKMSEAL 56 MAS+SIF+SFP+Y F+R D STSRRFTPPS A GKM E Sbjct: 1 MASNSIFDSFPTYSPTFIR-------------DPSTSRRFTPPSPAFPCGGGGGKMGENS 47 Query: 57 PLGAPDAGAALAGKLRSGDRSMVEVLADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAF 116 + A G+ R RSMV+VLADH GELVRTDSPNFLCSVLP+HWRCNKTLP+AF Sbjct: 48 GALSAQAAVGPGGRARPEVRSMVDVLADHAGELVRTDSPNFLCSVLPSHWRCNKTLPVAF 107 Query: 117 KVVALGDVPDGTLVTVMAGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLT 176 KVVALGDVPDGT+VTVMAGNDENYSAELRNA+A MKNQVARFNDLRFVGRSGRGKSFTLT Sbjct: 108 KVVALGDVPDGTVVTVMAGNDENYSAELRNASAVMKNQVARFNDLRFVGRSGRGKSFTLT 167 Query: 177 ITVFTNPPQVATYHRAIKITVDGPREPRRHRQKLDDQTKPGSLSFSERLSELEQLRRTAM 236 ITVFTNP QVATYHRAIK+TVDGPREPRRHRQKL+DQTKP F +R +LE+LR M Sbjct: 168 ITVFTNPTQVATYHRAIKVTVDGPREPRRHRQKLEDQTKP----FPDRFGDLERLR---M 220 Query: 237 RVSPHHPAPTPNPRASLNHSTAFNPQPQSQMQDTRQIQP-SPPWSYDQSYQYLGSIASPS 295 RV+P TP+PR SL+ ++ F+ QPQ+ +Q T ++ P S P +D+S+ Sbjct: 221 RVTP----STPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSF---------- 266 Query: 296 VHPATPISPGRASGMTTLSAELSSRLSTAPDLTAFSDPRQFPALPSISDPRMHYPG---- 351 T P LT +FP DPRMHYPG Sbjct: 267 --------------------------PTLPTLT----ESRFP------DPRMHYPGAMSA 290 Query: 352 AFTYSPTPV-TSGIGIGMSAMGSATRY-HTYLPPPYPGSSQAQGGPFQASSPSYHLYYGA 409 AF YS TP TS + ++ M + +R+ HTYLPPPYPG+ Q Q GPFQA+ YHLYYG Sbjct: 291 AFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQANPSPYHLYYGT 350 Query: 410 SAGSYQFSMV-----GGERSPPRILPPCTNASTGSA---LLNPSLPNQSDVVEAEGSHSN 461 S+GSYQFSMV GG+RSP R+L CT+++ A L+NPSL QSD VEA+GSHSN Sbjct: 351 SSGSYQFSMVAGSSSGGDRSPTRMLASCTSSAASVAAGNLMNPSLGGQSDGVEADGSHSN 410 Query: 462 SPTNMAPSARLEEAVWRPY 480 SPT ++ R++EAVWRPY Sbjct: 411 SPTALSTPGRMDEAVWRPY 429 >gi|169790837 runt-related transcription factor 1 isoform AML1a [Homo sapiens] Length = 250 Score = 479 bits (1232), Expect = e-135 Identities = 238/247 (96%), Positives = 241/247 (97%), Gaps = 4/247 (1%) Query: 33 DASTSRRFTPPSTALSPGKMSEALPLGAPDAGAALAGKLRSGDRSMVEVLADHPGELVRT 92 DASTSRRFTPPSTALSPGKMSEALPLGAPDAGAALAGKLRSGDRSMVEVLADHPGELVRT Sbjct: 6 DASTSRRFTPPSTALSPGKMSEALPLGAPDAGAALAGKLRSGDRSMVEVLADHPGELVRT 65 Query: 93 DSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAELRNATAAMK 152 DSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAELRNATAAMK Sbjct: 66 DSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAELRNATAAMK 125 Query: 153 NQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPRRHRQKLDD 212 NQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPRRHRQKLDD Sbjct: 126 NQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPRRHRQKLDD 185 Query: 213 QTKPGSLSFSERLSELEQLRRTAMRVSPHHPAPTPNPRASLNHSTAFNPQPQSQMQDTRQ 272 QTKPGSLSFSERLSELEQLRRTAMRVSPHHPAPTPNPRASLNHSTAFNPQPQSQMQ+ Sbjct: 186 QTKPGSLSFSERLSELEQLRRTAMRVSPHHPAPTPNPRASLNHSTAFNPQPQSQMQE--- 242 Query: 273 IQPSPPW 279 + + PW Sbjct: 243 -EDTAPW 248 >gi|4757918 runt-related transcription factor 3 isoform 2 [Homo sapiens] Length = 415 Score = 476 bits (1226), Expect = e-134 Identities = 270/467 (57%), Positives = 316/467 (67%), Gaps = 76/467 (16%) Query: 33 DASTSRRFTPPSTAL----SPGKMSEALPLGAPDAGAALAGKLRSGDRSMVEVLADHPGE 88 D STSRRFTPPS A GKM E + A G+ R RSMV+VLADH GE Sbjct: 6 DPSTSRRFTPPSPAFPCGGGGGKMGENSGALSAQAAVGPGGRARPEVRSMVDVLADHAGE 65 Query: 89 LVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAELRNAT 148 LVRTDSPNFLCSVLP+HWRCNKTLP+AFKVVALGDVPDGT+VTVMAGNDENYSAELRNA+ Sbjct: 66 LVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTVVTVMAGNDENYSAELRNAS 125 Query: 149 AAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPRRHRQ 208 A MKNQVARFNDLRFVGRSGRGKSFTLTITVFTNP QVATYHRAIK+TVDGPREPRRHRQ Sbjct: 126 AVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPTQVATYHRAIKVTVDGPREPRRHRQ 185 Query: 209 KLDDQTKPGSLSFSERLSELEQLRRTAMRVSPHHPAPTPNPRASLNHSTAFNPQPQSQMQ 268 KL+DQTKP F +R +LE+LR MRV+P TP+PR SL+ ++ F+ QPQ+ +Q Sbjct: 186 KLEDQTKP----FPDRFGDLERLR---MRVTP----STPSPRGSLSTTSHFSSQPQTPIQ 234 Query: 269 DTRQIQP-SPPWSYDQSYQYLGSIASPSVHPATPISPGRASGMTTLSAELSSRLSTAPDL 327 T ++ P S P +D+S+ T P L Sbjct: 235 GTSELNPFSDPRQFDRSF------------------------------------PTLPTL 258 Query: 328 TAFSDPRQFPALPSISDPRMHYPG----AFTYSPTPV-TSGIGIGMSAMGSATRY-HTYL 381 T +FP DPRMHYPG AF YS TP TS + ++ M + +R+ HTYL Sbjct: 259 T----ESRFP------DPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYL 308 Query: 382 PPPYPGSSQAQGGPFQASSPSYHLYYGASAGSYQFSMV-----GGERSPPRILPPCTNAS 436 PPPYPG+ Q Q GPFQA+ YHLYYG S+GSYQFSMV GG+RSP R+L CT+++ Sbjct: 309 PPPYPGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCTSSA 368 Query: 437 TGSA---LLNPSLPNQSDVVEAEGSHSNSPTNMAPSARLEEAVWRPY 480 A L+NPSL QSD VEA+GSHSNSPT ++ R++EAVWRPY Sbjct: 369 ASVAAGNLMNPSLGGQSDGVEADGSHSNSPTALSTPGRMDEAVWRPY 415 >gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] Length = 2285 Score = 50.4 bits (119), Expect = 3e-06 Identities = 64/227 (28%), Positives = 93/227 (40%), Gaps = 37/227 (16%) Query: 240 PHHPAPTPNPRASLNHSTAFNPQPQSQM-QDTRQIQPSPPWSYDQSYQYLGSIASPSVHP 298 P PAP+ +L+ A+ PQPQSQ Q T Q P + S GS AS Sbjct: 565 PQQPAPS-----TLSQQAAY-PQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQAS----- 613 Query: 299 ATPISPGRASGMTTLSAELSSRLSTAPDLTAFSDPRQFPALPSISDPRMHYPGAFTYSPT 358 + P G ++ L SR S+ PDL+ SI D M GA SP Sbjct: 614 SAPSMTSSKGGQEDMNLSLQSRPSSLPDLSG-----------SIDDLPMGTEGAL--SPG 660 Query: 359 PVTSGIGI--GMSAMGSATRYHTYLPPPYPGSSQAQGGPFQASSPSYHLYYGASAGSYQF 416 TSGI G + + + + + P PG GP + S + +G Sbjct: 661 VSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIR----GPSPSPVGSPASVAQSRSGPLSP 716 Query: 417 SMVGGERSPPRILPPCTNASTGSALLNPSLPNQSDVVEAEGSHSNSP 463 + V G + PPR PP + ++++PS+ NQS + + G +P Sbjct: 717 AAVPGNQMPPR--PP---SGQSDSIMHPSM-NQSSIAQDRGYMQRNP 757 Score = 30.4 bits (67), Expect = 3.7 Identities = 48/202 (23%), Positives = 70/202 (34%), Gaps = 20/202 (9%) Query: 259 FNPQPQSQMQDTRQIQPSPPWSYDQSYQYLGSIASPSVHPATPISPGRASGMTTLSAELS 318 F+P + R PSP S Q SP+ P + P SG + S Sbjct: 681 FSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPS 740 Query: 319 SRLSTAPDLTAFSDPRQFPALPSISDPRMHYPGAFTYSPTPVTSGIGIGMSAMGSATRYH 378 S+ + ++ P +P S P+ PG+ P I G MGS + Sbjct: 741 MNQSSIAQDRGYM--QRNPQMPQYSSPQ---PGSALSPRQPSGGQIHTG---MGSYQQNS 792 Query: 379 TYLPPPYPGSSQAQGG----PFQASSPSYHLYYGASAGSYQFSMVGGER------SPPRI 428 P G QGG P + P+ + AG GG+ P Sbjct: 793 MGSYGPQGGQYGPQGGYPRQPNYNALPNANYPSAGMAGGINPMGAGGQMHGQPGIPPYGT 852 Query: 429 LPP--CTNASTGSALLNPSLPN 448 LPP ++AS G+ P++ N Sbjct: 853 LPPGRMSHASMGNRPYGPNMAN 874 >gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] Length = 2068 Score = 50.4 bits (119), Expect = 3e-06 Identities = 64/227 (28%), Positives = 93/227 (40%), Gaps = 37/227 (16%) Query: 240 PHHPAPTPNPRASLNHSTAFNPQPQSQM-QDTRQIQPSPPWSYDQSYQYLGSIASPSVHP 298 P PAP+ +L+ A+ PQPQSQ Q T Q P + S GS AS Sbjct: 565 PQQPAPS-----TLSQQAAY-PQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQAS----- 613 Query: 299 ATPISPGRASGMTTLSAELSSRLSTAPDLTAFSDPRQFPALPSISDPRMHYPGAFTYSPT 358 + P G ++ L SR S+ PDL+ SI D M GA SP Sbjct: 614 SAPSMTSSKGGQEDMNLSLQSRPSSLPDLSG-----------SIDDLPMGTEGAL--SPG 660 Query: 359 PVTSGIGI--GMSAMGSATRYHTYLPPPYPGSSQAQGGPFQASSPSYHLYYGASAGSYQF 416 TSGI G + + + + + P PG GP + S + +G Sbjct: 661 VSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIR----GPSPSPVGSPASVAQSRSGPLSP 716 Query: 417 SMVGGERSPPRILPPCTNASTGSALLNPSLPNQSDVVEAEGSHSNSP 463 + V G + PPR PP + ++++PS+ NQS + + G +P Sbjct: 717 AAVPGNQMPPR--PP---SGQSDSIMHPSM-NQSSIAQDRGYMQRNP 757 Score = 30.4 bits (67), Expect = 3.7 Identities = 48/202 (23%), Positives = 70/202 (34%), Gaps = 20/202 (9%) Query: 259 FNPQPQSQMQDTRQIQPSPPWSYDQSYQYLGSIASPSVHPATPISPGRASGMTTLSAELS 318 F+P + R PSP S Q SP+ P + P SG + S Sbjct: 681 FSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPS 740 Query: 319 SRLSTAPDLTAFSDPRQFPALPSISDPRMHYPGAFTYSPTPVTSGIGIGMSAMGSATRYH 378 S+ + ++ P +P S P+ PG+ P I G MGS + Sbjct: 741 MNQSSIAQDRGYM--QRNPQMPQYSSPQ---PGSALSPRQPSGGQIHTG---MGSYQQNS 792 Query: 379 TYLPPPYPGSSQAQGG----PFQASSPSYHLYYGASAGSYQFSMVGGER------SPPRI 428 P G QGG P + P+ + AG GG+ P Sbjct: 793 MGSYGPQGGQYGPQGGYPRQPNYNALPNANYPSAGMAGGINPMGAGGQMHGQPGIPPYGT 852 Query: 429 LPP--CTNASTGSALLNPSLPN 448 LPP ++AS G+ P++ N Sbjct: 853 LPPGRMSHASMGNRPYGPNMAN 874 >gi|28558973 mediator complex subunit 14 [Homo sapiens] Length = 1454 Score = 46.2 bits (108), Expect = 7e-05 Identities = 57/236 (24%), Positives = 84/236 (35%), Gaps = 24/236 (10%) Query: 245 PTPNPRASLNHSTAFNPQPQSQMQDTRQIQPSPPWSYDQSYQYLGSIASPSVHPATPISP 304 P P + LN N + + + PSP D + + P P P Sbjct: 955 PAPGLKTFLNMFVDSNQDARRRSVNEDDNPPSPIGG-DMMDSLISQLQPPPQQQPFPKQP 1013 Query: 305 GRASG--MTTLSAELSSRLSTAPDLTAFSDPRQFPALPSISDP-RMHYPGAFTYSPTPVT 361 G + +T+ S ++ +P + P A S S R P +F +P P + Sbjct: 1014 GTSGAYPLTSPPTSYHSTVNQSPSMMHTQSPGNLHAASSPSGALRAPSPASFVPTPPPSS 1073 Query: 362 SGIGIGMSAMGSATRYHTYLPPPYPGSSQAQGGPFQASSPSYHLYYGASAGSYQFSMVGG 421 GI IG A S H L P P+ SPS AG++ S Sbjct: 1074 HGISIGPGA--SFASPHGTLDP---------SSPYTMVSPS------GRAGNWPGSPQVS 1116 Query: 422 ERSPPRILPPCTNASTGSALLNPSLPNQSDVVEAEGSHSNSPTNMAPSARLEEAVW 477 SP +P + A+ L+ +P+ S A S PTNM P +L + W Sbjct: 1117 GPSPAARMPGMSPANPS---LHSPVPDASHSPRAGTSSQTMPTNMPPPRKLPQRSW 1169 >gi|21536357 TBP-associated factor 6 isoform delta [Homo sapiens] Length = 667 Score = 41.6 bits (96), Expect = 0.002 Identities = 54/203 (26%), Positives = 78/203 (38%), Gaps = 30/203 (14%) Query: 227 ELEQLRRTAMRVSPHHP------APTPNPRA----SLNHSTAFNPQPQSQMQDTRQIQPS 276 + +Q+ RT + ++ P AP P PR + S A Q + QPS Sbjct: 463 QAQQVNRTTLTITQPRPTLTLSQAPQPGPRTPGLLKVPGSIALPVQTLVSARAAAPPQPS 522 Query: 277 PPWSYDQSYQYLGSIASPSVHPATPISPGR-ASGMTTLS------------AELSSRLST 323 PP + + S ++PS +S SG TT S +L S +T Sbjct: 523 PPPT--KFIVMSSSSSAPSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQPIVKLVSTATT 580 Query: 324 APDLTAFSDPRQFPALPSIS-DPRMHYPGAFTYSPTPV----TSGIGIGMSAMGSATRYH 378 AP TA S P +S P G T P+PV +S + SA+ + Sbjct: 581 APPSTAPSGPGSVQKYIVVSLPPTGEGKGGPTSHPSPVPPPASSPSPLSGSALCGGKQEA 640 Query: 379 TYLPPPYPGSSQAQGGPFQASSP 401 PPP PG+ +A G + SP Sbjct: 641 GDSPPPAPGTPKANGSQPNSGSP 663 >gi|5032147 TBP-associated factor 6 isoform alpha [Homo sapiens] Length = 677 Score = 41.6 bits (96), Expect = 0.002 Identities = 54/203 (26%), Positives = 78/203 (38%), Gaps = 30/203 (14%) Query: 227 ELEQLRRTAMRVSPHHP------APTPNPRA----SLNHSTAFNPQPQSQMQDTRQIQPS 276 + +Q+ RT + ++ P AP P PR + S A Q + QPS Sbjct: 473 QAQQVNRTTLTITQPRPTLTLSQAPQPGPRTPGLLKVPGSIALPVQTLVSARAAAPPQPS 532 Query: 277 PPWSYDQSYQYLGSIASPSVHPATPISPGR-ASGMTTLS------------AELSSRLST 323 PP + + S ++PS +S SG TT S +L S +T Sbjct: 533 PPPT--KFIVMSSSSSAPSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQPIVKLVSTATT 590 Query: 324 APDLTAFSDPRQFPALPSIS-DPRMHYPGAFTYSPTPV----TSGIGIGMSAMGSATRYH 378 AP TA S P +S P G T P+PV +S + SA+ + Sbjct: 591 APPSTAPSGPGSVQKYIVVSLPPTGEGKGGPTSHPSPVPPPASSPSPLSGSALCGGKQEA 650 Query: 379 TYLPPPYPGSSQAQGGPFQASSP 401 PPP PG+ +A G + SP Sbjct: 651 GDSPPPAPGTPKANGSQPNSGSP 673 >gi|21536359 TBP-associated factor 6 isoform alpha [Homo sapiens] Length = 677 Score = 41.6 bits (96), Expect = 0.002 Identities = 54/203 (26%), Positives = 78/203 (38%), Gaps = 30/203 (14%) Query: 227 ELEQLRRTAMRVSPHHP------APTPNPRA----SLNHSTAFNPQPQSQMQDTRQIQPS 276 + +Q+ RT + ++ P AP P PR + S A Q + QPS Sbjct: 473 QAQQVNRTTLTITQPRPTLTLSQAPQPGPRTPGLLKVPGSIALPVQTLVSARAAAPPQPS 532 Query: 277 PPWSYDQSYQYLGSIASPSVHPATPISPGR-ASGMTTLS------------AELSSRLST 323 PP + + S ++PS +S SG TT S +L S +T Sbjct: 533 PPPT--KFIVMSSSSSAPSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQPIVKLVSTATT 590 Query: 324 APDLTAFSDPRQFPALPSIS-DPRMHYPGAFTYSPTPV----TSGIGIGMSAMGSATRYH 378 AP TA S P +S P G T P+PV +S + SA+ + Sbjct: 591 APPSTAPSGPGSVQKYIVVSLPPTGEGKGGPTSHPSPVPPPASSPSPLSGSALCGGKQEA 650 Query: 379 TYLPPPYPGSSQAQGGPFQASSP 401 PPP PG+ +A G + SP Sbjct: 651 GDSPPPAPGTPKANGSQPNSGSP 673 >gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo sapiens] Length = 1038 Score = 40.8 bits (94), Expect = 0.003 Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 7/137 (5%) Query: 216 PGSLSFSERLSELEQLRRTAMRVSPHHPAPTPNPRASLNHSTAFN-PQPQSQMQDTRQIQ 274 P S +E L+Q ++ PAP+P+P P P + Q+ Sbjct: 698 PSSAQTAEIFQALQQECMRQLQAPAGSPAPSPSPGGDDKPQVPPRVPIPPRPTRPHVQLS 757 Query: 275 PSPPWSYDQSYQYLGSIASPSVHPATPISPGRASGMTTL----SAELSSRLSTAPDLTAF 330 P+PP +++ Q+ G + P V P P+SP + + L S+ L RLS++P T Sbjct: 758 PAPP-GEEETSQWPGPASPPRVPPREPLSPQGSRTPSPLVPPGSSPLPPRLSSSPGKT-M 815 Query: 331 SDPRQFPALPSISDPRM 347 + F + P + P++ Sbjct: 816 PTTQSFASDPKYATPQV 832 >gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo sapiens] Length = 1086 Score = 40.8 bits (94), Expect = 0.003 Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 7/137 (5%) Query: 216 PGSLSFSERLSELEQLRRTAMRVSPHHPAPTPNPRASLNHSTAFN-PQPQSQMQDTRQIQ 274 P S +E L+Q ++ PAP+P+P P P + Q+ Sbjct: 776 PSSAQTAEIFQALQQECMRQLQAPAGSPAPSPSPGGDDKPQVPPRVPIPPRPTRPHVQLS 835 Query: 275 PSPPWSYDQSYQYLGSIASPSVHPATPISPGRASGMTTL----SAELSSRLSTAPDLTAF 330 P+PP +++ Q+ G + P V P P+SP + + L S+ L RLS++P T Sbjct: 836 PAPP-GEEETSQWPGPASPPRVPPREPLSPQGSRTPSPLVPPGSSPLPPRLSSSPGKT-M 893 Query: 331 SDPRQFPALPSISDPRM 347 + F + P + P++ Sbjct: 894 PTTQSFASDPKYATPQV 910 >gi|55750053 atrophin-1 [Homo sapiens] Length = 1190 Score = 40.8 bits (94), Expect = 0.003 Identities = 62/239 (25%), Positives = 84/239 (35%), Gaps = 32/239 (13%) Query: 235 AMRVSPHHPAPTPNPRASLNHSTAFN---PQPQSQMQDTRQIQPSPPWSYDQSYQYLGSI 291 ++R P PA P P + +++S A P S + Q S P S+ Q G Sbjct: 538 SLRPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQ--GPQ 595 Query: 292 ASPSVHPATPISPGRASGMTTLSAELSSRLSTAPDLTAFSDPRQFPALPSISDPRMHYPG 351 +P P P +TT SA LS+ ++T A P P R PG Sbjct: 596 GAPYPFPPVPT-------VTTSSATLSTVIATVASSPAGYKTASPPGPPPYGK-RAPSPG 647 Query: 352 AFTYSPTPVTSGIGIGMSAMGSATRYHTYLPPPYPGSSQAQG-GPFQASSPSYHLYYGAS 410 A+ + P GS + T PP Y G+S G G F+ SP + Sbjct: 648 AYKTATPPGYKP--------GSPPSFRTGTPPGYRGTSPPAGPGTFKPGSP--------T 691 Query: 411 AGSYQFSMVGGERSPPRILPPCTNASTGSALLNPSLPNQSDVVEAEGSHSNSPTNMAPS 469 G G P LPP A L+ + Q E E S P +PS Sbjct: 692 VGPGPLPPAGPSGLPS--LPPPPAAPASGPPLSATQIKQEPAEEYETPESPVPPARSPS 748 Score = 34.3 bits (77), Expect = 0.26 Identities = 58/230 (25%), Positives = 83/230 (36%), Gaps = 36/230 (15%) Query: 235 AMRVSPHHPAPTPNPRA-SLNHSTAFNPQPQSQMQDTRQIQPSPPWSYDQSYQYLGSIAS 293 A + P +P P P + S+++ QP Q P PP Y + +A+ Sbjct: 401 ASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRL------LAN 454 Query: 294 PSVHPATPISPGRASGMTTLSAELSSRLSTAPDLTAFSDPRQFPALPSISDPRMHY---- 349 + HP P P + T +ST +Q + H+ Sbjct: 455 SNAHPG-PFPPSTGAQSTA-----HPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSG 508 Query: 350 ---PGAFTYSPTPVTSGIG-----IGMS-AMGSATRYH---TYLPPPYPGSSQAQGGP-F 396 PGAF P P+ G MS ++GS Y +LPPP+ S +Q GP Sbjct: 509 PPPPGAF---PHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNG 565 Query: 397 QASSPSYHLYYGASAGSYQFSMVGGERSP---PRILPPCTNASTGSALLN 443 S S + S GSY S + P P PP +T SA L+ Sbjct: 566 PPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLS 615 >gi|55750041 atrophin-1 [Homo sapiens] Length = 1190 Score = 40.8 bits (94), Expect = 0.003 Identities = 62/239 (25%), Positives = 84/239 (35%), Gaps = 32/239 (13%) Query: 235 AMRVSPHHPAPTPNPRASLNHSTAFN---PQPQSQMQDTRQIQPSPPWSYDQSYQYLGSI 291 ++R P PA P P + +++S A P S + Q S P S+ Q G Sbjct: 538 SLRPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQ--GPQ 595 Query: 292 ASPSVHPATPISPGRASGMTTLSAELSSRLSTAPDLTAFSDPRQFPALPSISDPRMHYPG 351 +P P P +TT SA LS+ ++T A P P R PG Sbjct: 596 GAPYPFPPVPT-------VTTSSATLSTVIATVASSPAGYKTASPPGPPPYGK-RAPSPG 647 Query: 352 AFTYSPTPVTSGIGIGMSAMGSATRYHTYLPPPYPGSSQAQG-GPFQASSPSYHLYYGAS 410 A+ + P GS + T PP Y G+S G G F+ SP + Sbjct: 648 AYKTATPPGYKP--------GSPPSFRTGTPPGYRGTSPPAGPGTFKPGSP--------T 691 Query: 411 AGSYQFSMVGGERSPPRILPPCTNASTGSALLNPSLPNQSDVVEAEGSHSNSPTNMAPS 469 G G P LPP A L+ + Q E E S P +PS Sbjct: 692 VGPGPLPPAGPSGLPS--LPPPPAAPASGPPLSATQIKQEPAEEYETPESPVPPARSPS 748 Score = 34.3 bits (77), Expect = 0.26 Identities = 58/230 (25%), Positives = 83/230 (36%), Gaps = 36/230 (15%) Query: 235 AMRVSPHHPAPTPNPRA-SLNHSTAFNPQPQSQMQDTRQIQPSPPWSYDQSYQYLGSIAS 293 A + P +P P P + S+++ QP Q P PP Y + +A+ Sbjct: 401 ASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRL------LAN 454 Query: 294 PSVHPATPISPGRASGMTTLSAELSSRLSTAPDLTAFSDPRQFPALPSISDPRMHY---- 349 + HP P P + T +ST +Q + H+ Sbjct: 455 SNAHPG-PFPPSTGAQSTA-----HPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSG 508 Query: 350 ---PGAFTYSPTPVTSGIG-----IGMS-AMGSATRYH---TYLPPPYPGSSQAQGGP-F 396 PGAF P P+ G MS ++GS Y +LPPP+ S +Q GP Sbjct: 509 PPPPGAF---PHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNG 565 Query: 397 QASSPSYHLYYGASAGSYQFSMVGGERSP---PRILPPCTNASTGSALLN 443 S S + S GSY S + P P PP +T SA L+ Sbjct: 566 PPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLS 615 >gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens] Length = 1970 Score = 40.4 bits (93), Expect = 0.004 Identities = 55/222 (24%), Positives = 82/222 (36%), Gaps = 25/222 (11%) Query: 234 TAMRVSPHHPAPTPNPRASLNHSTAFNPQPQSQMQDTRQIQPSPPWSYDQSYQYLGSIAS 293 T+ SP P+ +P + S +++P S + P+ P S Y S S Sbjct: 1632 TSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY--SPTS 1689 Query: 294 PSVHPATP----ISPGRASGMTTLSAELSSRLSTAPDLTAFSDPRQFPALPSISDPRMHY 349 PS P +P SP + + S S T+P + S P P PS S +Y Sbjct: 1690 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS-PSYSPTSPSYSPTSPNY 1748 Query: 350 -PGAFTYSPTPVTSGIGIGMSAMGSATRYHTYLPPPYPGSSQAQGGPFQASSPSYHLYYG 408 P + Y+PT S ++ Y P P S + +SPSY Sbjct: 1749 SPTSPNYTPT--------SPSYSPTSPSYSPTSPNYTPTSPN-----YSPTSPSY----S 1791 Query: 409 ASAGSYQFSMVGGERSPPRILPPCTNASTGSALLNPSLPNQS 450 ++ SY + S PR P + S +PS P+ S Sbjct: 1792 PTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYS 1833 Score = 38.5 bits (88), Expect = 0.014 Identities = 52/193 (26%), Positives = 74/193 (38%), Gaps = 22/193 (11%) Query: 234 TAMRVSPHHPAPTPNPRASLNHSTAFNPQPQSQMQDTRQIQPSPPWSYDQSYQYLGSI-- 291 T+ SP P TP S +++P S + PS P QS Y S Sbjct: 1765 TSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPS 1824 Query: 292 ---ASPSVHPA----TPISPGRASGMTTLSAELSSRLSTAPDLTAFSDPRQFPALPSISD 344 +SPS P TP SP + + T+P + S P+ P P+ S Sbjct: 1825 YSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTS-PKYSPTSPTYSP 1883 Query: 345 PRMHY-PGAFTYSPT-PVTSGIGIGMSAMG-----SATRYH----TYLPPPYPGSSQAQG 393 Y P + TYSPT PV + S ++ +Y TY P GS+ + Sbjct: 1884 TTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPT 1943 Query: 394 GP-FQASSPSYHL 405 P + +SP+Y L Sbjct: 1944 SPGYSPTSPTYSL 1956 Score = 31.2 bits (69), Expect = 2.2 Identities = 49/185 (26%), Positives = 66/185 (35%), Gaps = 36/185 (19%) Query: 293 SPSVHP----ATPI----SPGRASGMTTLSAELSSRLSTAPDLTAFSDPRQFPALPSISD 344 SP++ P ATP SP SGMT +A S S A D + FS P PA Sbjct: 1514 SPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSP--SAASDASGFS-PGYSPA------ 1564 Query: 345 PRMHYPGAFTYSPTPVTSGIGIGMSAMGSATRYHTYLPPPYPGSSQAQGGPFQASSPSYH 404 +SPTP + GS Y+P P S + A P Sbjct: 1565 ----------WSPTP---------GSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSP 1605 Query: 405 LYYGASAGSYQFSMVGGERSPPRILPPCTNASTGSALLNPSLPNQSDVVEAEGSHSNSPT 464 Y + SY + + P P N S S +P+ P+ S + S S + Sbjct: 1606 GGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1665 Query: 465 NMAPS 469 +PS Sbjct: 1666 PTSPS 1670 >gi|56549668 AT rich interactive domain 2 (ARID, RFX-like) [Homo sapiens] Length = 1835 Score = 38.9 bits (89), Expect = 0.010 Identities = 45/164 (27%), Positives = 66/164 (40%), Gaps = 26/164 (15%) Query: 235 AMRVSPHHPAPTPNPRASLNHSTAFNPQPQSQMQDTRQ--IQPSPPWSYDQSYQYLGSIA 292 A RV + AP P P ++ + P Q Q Q T+Q + S P Q+Y Sbjct: 888 ASRVGFQNIAPKPLPSQQVSSTVVQQPIQQPQ-QPTQQSVVIVSQPAQQGQTY------- 939 Query: 293 SPSVHPATPISPGRASGMTTLSAELSSRLSTAPDLTAFSDPRQFPALPSISDPRMHYPGA 352 +P++H +P L A + +L+ P++T S P PA + P A Sbjct: 940 APAIHQIVLANPA------ALPAGQTVQLTGQPNITPSSSPSPVPATNN------QVPTA 987 Query: 353 FTYSPTPVTSGIGIGMSAMGSATR----YHTYLPPPYPGSSQAQ 392 + S TP + G +S M S R H+ PPP Q Q Sbjct: 988 MSSSSTPQSQGPPPTVSQMLSVKRQQQQQHSPAPPPQQVQVQVQ 1031 >gi|22027471 neuronal PAS domain protein 2 [Homo sapiens] Length = 824 Score = 38.5 bits (88), Expect = 0.014 Identities = 38/118 (32%), Positives = 49/118 (41%), Gaps = 15/118 (12%) Query: 224 RLSELEQL--RRTAMRVSPHHPAPTPNPRASLNHSTAFNPQPQSQMQDTRQIQPSPPWSY 281 R S+L Q R + VSP A P SLN +T P S QD Q QPSP +S+ Sbjct: 615 RSSQLMQSSGRSGSSLVSPFSSATAALP-PSLNLTT-----PASTSQDASQCQPSPDFSH 668 Query: 282 DQSYQYLGSIASPSVHPATPISPGRASGMTTLSAELSSR-LSTAPDLTAFSDPRQFPA 338 D+ + L S P P+ PG + R + A T F +P PA Sbjct: 669 DRQLRLLLS------QPIQPMMPGSCDARQPSEVSRTGRQVKYAQSQTVFQNPDAHPA 720 >gi|4826998 splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) [Homo sapiens] Length = 707 Score = 38.5 bits (88), Expect = 0.014 Identities = 48/191 (25%), Positives = 59/191 (30%), Gaps = 16/191 (8%) Query: 240 PHHPAPTPNPRASLNHSTAFNPQPQSQMQDTRQIQPSPPWSYDQSYQYLGSIASP--SVH 297 P P P P P QP Q +Q P P + Q +Q P S Sbjct: 56 PKPPIPPPPPHQQ-------QQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSK 108 Query: 298 PATPISPGRASGMTTLSAELSSRLSTAPDLTAFSDPRQFPALPSISDPRMHYPGAFTYSP 357 P PG A G+ + SS P T+ + P P P + P Sbjct: 109 PVVAQGPGPAPGVGSAPPASSSAPPATPP-TSGAPPGSGPGPTPTPPPAVTSAPPGAPPP 167 Query: 358 TPVTSGIGIGMSAMGSATRYHTYLPPPYPGSSQ--AQGGPFQASSPSYHLYYGASAGSYQ 415 TP +SG+ G +P P PG Q GGP P G Sbjct: 168 TPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPG----GPKPGGGPG 223 Query: 416 FSMVGGERSPP 426 S GG PP Sbjct: 224 LSTPGGHPKPP 234 >gi|116284392 mucin 2 precursor [Homo sapiens] Length = 5179 Score = 38.1 bits (87), Expect = 0.018 Identities = 31/124 (25%), Positives = 47/124 (37%), Gaps = 6/124 (4%) Query: 243 PAPTPNPRASLNHSTA----FNPQPQSQMQDTRQIQPSPPWSYDQSYQYLGSIASPSVHP 298 P PT P ++ +T P P + PSPP + + + + P+ P Sbjct: 1448 PPPTTTPSPPISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTP 1507 Query: 299 ATPISPGRASGMTTLSAELSSRLSTAPDLTAFSDPRQFPALPSISDPRMHYPGAFTYSPT 358 TP + TT + ++ +T P T S P P P S + P T SP Sbjct: 1508 ITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTL--PPTTTPSPP 1565 Query: 359 PVTS 362 P T+ Sbjct: 1566 PTTT 1569 Score = 34.3 bits (77), Expect = 0.26 Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 9/123 (7%) Query: 245 PTPNPRASLNHSTAFNPQPQSQMQDTRQIQPSPPWSYDQSYQYLGSI-----ASPSVHPA 299 PT A + T NP P+S T + SP +S L ++ + + P+ Sbjct: 4198 PTHTSTAPIAELTTSNPPPESSTPQTSRSTSSP---LTESTTLLSTLPPAIEMTSTAPPS 4254 Query: 300 TPISPGRASGMTTLSAELSSRLSTAPDLTAFSDPRQFPALPSISDPRMHYPGAFTYSPTP 359 TP +P SG TLS S+ S P + P+ S + A+T +PTP Sbjct: 4255 TPTAPTTTSGGHTLSPPPSTTTS-PPGTPTRGTTTGSSSAPTPSTVQTTTTSAWTPTPTP 4313 Query: 360 VTS 362 +++ Sbjct: 4314 LST 4316 Score = 31.2 bits (69), Expect = 2.2 Identities = 51/229 (22%), Positives = 75/229 (32%), Gaps = 17/229 (7%) Query: 243 PAPTPNPRASLNHSTAFNPQPQSQMQDTRQIQPSPPWSYDQSYQYLGSIASPSVHPATPI 302 P P +L +T +P P + PSPP + S + + P P T Sbjct: 1546 PITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPP---PTTTP 1602 Query: 303 SPGRASGMTTLSAELSSRLSTAPDLTAFSDPRQFPALPSISDPRMHYPGAFTYSPTPVTS 362 SP TT + + + P T + P LP + P P T +P P T+ Sbjct: 1603 SP----PTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSP--PPTTTTTPPPTTT 1656 Query: 363 GIGIGMSAMGSATRYHTYLPPPYPGSSQAQGGPFQASSPSYHLYYGASAGSYQFSMVGGE 422 + T PP SS P SP S + S + Sbjct: 1657 PSPPTTTTPSPPITTTTTPPPTTTPSSPITTTP----SPPTTTMTTPSPTTTPSSPITTT 1712 Query: 423 RSPPRIL---PPCTNASTGSALLNPSLPNQSDVVEAEGSHSNSPTNMAP 468 +P PP T +T S PS P + + + ++SP P Sbjct: 1713 TTPSSTTTPSPPPTTMTTPSPTTTPS-PPTTTMTTLPPTTTSSPLTTTP 1760 Score = 30.8 bits (68), Expect = 2.8 Identities = 30/117 (25%), Positives = 45/117 (38%), Gaps = 15/117 (12%) Query: 246 TPNPRASLNHSTAFNPQPQSQMQDTRQIQPSPPWSYDQSYQYLGSIASPSVHPATPISPG 305 TP+P +T +P P S PSPP + + P+ P+ PI+ Sbjct: 1398 TPSPP-----TTTPSPPPTSTTTLPPTTTPSPPTTTTTT-------PPPTTTPSPPITTT 1445 Query: 306 RASGMTTLSAELSSRLSTAPDLTAFSDPRQFPALPSISDPRMHYPGAFTYSPTPVTS 362 TT + S +T P T S P P+ P+ + P T +P P T+ Sbjct: 1446 TTPPPTTTPSPPISTTTTPPPTTTPSPPTTTPSPPTTTPSP---PTTTTTTPPPTTT 1499 Score = 30.8 bits (68), Expect = 2.8 Identities = 33/133 (24%), Positives = 48/133 (36%), Gaps = 21/133 (15%) Query: 243 PAPTPNPRASLNHS----TAFNPQPQSQMQDTRQIQPSPPWSYDQSYQYLGSIASPSVHP 298 P TP+P + S T P P + PSPP + + + +SP Sbjct: 1653 PTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTT 1712 Query: 299 ATPISPGRAS---------GMTTLSAELSSRLSTAPDLTAFSDPRQFPALPSISDPRMHY 349 TP S S TT + ++ ++T P T S P PSI+ P Sbjct: 1713 TTPSSTTTPSPPPTTMTTPSPTTTPSPPTTTMTTLPPTTTSSPLTTTPLPPSITPP---- 1768 Query: 350 PGAFTYSPTPVTS 362 T+SP T+ Sbjct: 1769 ----TFSPFSTTT 1777 Score = 29.3 bits (64), Expect = 8.3 Identities = 35/146 (23%), Positives = 52/146 (35%), Gaps = 20/146 (13%) Query: 243 PAPTPNPRASLNHSTAFNPQPQSQMQDTRQIQPSPPWSYDQSYQYLGSIASPSVHPATPI 302 P+P P +L +T +P + PSPP + + P+ P+ PI Sbjct: 1406 PSPPPTSTTTLPPTTTPSPPTTTTTTPPPTTTPSPPIT-------TTTTPPPTTTPSPPI 1458 Query: 303 SPGRASGMTTLSAELSSRLSTAPDLTAFSDPRQFPALP---SISDPRMHYPGAFTYSP-T 358 S TT + +P T S P P+ P + + P P T +P T Sbjct: 1459 STTTTPPPTT---------TPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPIT 1509 Query: 359 PVTSGIGIGMSAMGSATRYHTYLPPP 384 P S + + S T PPP Sbjct: 1510 PPASTTTLPPTTTPSPPTTTTTTPPP 1535 Score = 29.3 bits (64), Expect = 8.3 Identities = 29/124 (23%), Positives = 42/124 (33%), Gaps = 2/124 (1%) Query: 240 PHHPAPTPNPRASLNHSTAFNPQPQSQMQDTRQ--IQPSPPWSYDQSYQYLGSIASPSVH 297 P TP P + + T P P + T PSPP + + + + P+ Sbjct: 1565 PPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTT 1624 Query: 298 PATPISPGRASGMTTLSAELSSRLSTAPDLTAFSDPRQFPALPSISDPRMHYPGAFTYSP 357 P TP + TT + + +T P T S P P I+ P SP Sbjct: 1625 PITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSP 1684 Query: 358 TPVT 361 T Sbjct: 1685 ITTT 1688 >gi|5454064 RNA binding motif protein 14 [Homo sapiens] Length = 669 Score = 38.1 bits (87), Expect = 0.018 Identities = 48/169 (28%), Positives = 67/169 (39%), Gaps = 22/169 (13%) Query: 249 PRASLNHSTAFNPQPQSQMQDTRQIQPSPPWSYDQSYQYLGSIASPSVHPATPISPGRAS 308 P ASL + QP + + + QPS Y G +ASPS A S G Sbjct: 253 PSASLG--VGYRTQPMTAQAASYRAQPS----VSLGAPYRGQLASPSSQSAAASSLGPYG 306 Query: 309 GMTTLSAELSS---RLSTAPDLTAFSDPRQFPALPSISDPRMHYPGAFTYSPTPVTSGIG 365 G ++ LSS + + A L ++ Q +L S + Y GA S G Sbjct: 307 GAQPSASALSSYGGQAAAASSLNSYG--AQGSSLASYGNQPSSY-GA------QAASSYG 357 Query: 366 IGMSAMGSATRYHTYLPPPYPGSSQAQGGPFQASSPSYHLYYGASAGSY 414 + +A+ Y+T GS AQ + A S + L YGA A SY Sbjct: 358 V----RAAASSYNTQGAASSLGSYGAQAASYGAQSAASSLAYGAQAASY 402 >gi|21536355 TBP-associated factor 6 isoform gamma [Homo sapiens] Length = 667 Score = 37.4 bits (85), Expect = 0.030 Identities = 50/180 (27%), Positives = 68/180 (37%), Gaps = 24/180 (13%) Query: 244 APTPNPRA----SLNHSTAFNPQPQSQMQDTRQIQPSPPWSYDQSYQYLGSIASPSVHPA 299 AP P PR + S A Q + QPSPP + + S ++PS Sbjct: 486 APQPGPRTPGLLKVPGSIALPVQTLVSARAAAPPQPSPPPT--KFIVMSSSSSAPSTQQV 543 Query: 300 TPISPGR-ASGMTTLS------------AELSSRLSTAPDLTAFSDPRQFPALPSIS-DP 345 +S SG TT S +L S +TAP TA S P +S P Sbjct: 544 LSLSTSAPGSGSTTTSPVTTTVPSVQPIVKLVSTATTAPPSTAPSGPGSVQKYIVVSLPP 603 Query: 346 RMHYPGAFTYSPTPV----TSGIGIGMSAMGSATRYHTYLPPPYPGSSQAQGGPFQASSP 401 G T P+PV +S + SA+ + PPP PG+ +A G + SP Sbjct: 604 TGEGKGGPTSHPSPVPPPASSPSPLSGSALCGGKQEAGDSPPPAPGTPKANGSQPNSGSP 663 >gi|32171215 CREB regulated transcription coactivator 2 [Homo sapiens] Length = 693 Score = 37.4 bits (85), Expect = 0.030 Identities = 62/260 (23%), Positives = 94/260 (36%), Gaps = 65/260 (25%) Query: 241 HHPAPTPNPRASLNHST--AFNPQPQSQMQDTRQIQPSPPWSYDQSYQYLGSIASPSVHP 298 H P P+ ++SL++ A PQ Q+Q + P S + S+ PS+ Sbjct: 335 HSPLSHPSLQSSLSNPNLQASLSSPQPQLQGSHSHPSLPASSLARHVLPTTSLGHPSL-- 392 Query: 299 ATPISPGRASGMTTLSAELSSRLSTAPDLTAFSDPRQFPALPS--ISDP------RMHYP 350 + P +S +T S L + A A R+ P P ++ P + P Sbjct: 393 SAPALSSSSSSSSTSSPVLGAPSYPASTPGASPHHRRVPLSPLSLLAGPADARRSQQQLP 452 Query: 351 GAF--TYSPT--PVTSGIGIGMSAMGSATRYHTYLPPPYPGSSQAQGGPFQASSPSYHLY 406 F T SPT +T G+ + S + + R PPYP SS Sbjct: 453 KQFSPTMSPTLSSITQGVPLDTSKLSTDQRL-----PPYPYSS----------------- 490 Query: 407 YGASAGSYQFSMVGGERSPPRILPPCTNASTGSALLNPSLPNQSDVVEAEG-------SH 459 P +LP T T +L P LP+QS V++ G SH Sbjct: 491 ------------------PSLVLP--TQPHTPKSLQQPGLPSQSCSVQSSGGQPPGRQSH 530 Query: 460 SNSPTNMAPSARLEEAVWRP 479 +P PS +++ RP Sbjct: 531 YGTPYPPGPSGHGQQSYHRP 550 >gi|45827755 transforming, acidic coiled-coil containing protein 2 isoform b [Homo sapiens] Length = 1094 Score = 37.4 bits (85), Expect = 0.030 Identities = 44/187 (23%), Positives = 67/187 (35%), Gaps = 29/187 (15%) Query: 246 TPNPRASLNHSTAFNPQPQSQMQDTRQIQPSPPWSYDQSYQYLGSIASPSVHPATPI--- 302 T + + +L+ T + QP Q+ ++ Q P S D +A + PA P Sbjct: 7 TSDNQRTLSAQTPRSAQPPGNSQNIKRKQQDTPGSPDHRDASSSPVADDIIQPAAPADLE 66 Query: 303 SPGRASG----------MTTLSAELSSRLSTAPDLTAFSDPRQFPALPSISDPRMHYPGA 352 SP A+ T L A+ SS A + + P + P P P + Sbjct: 67 SPTLAASSYHGDVVGQVSTDLIAQRSSDSEEAFETPESTTPVKAPPAPPPPPPEVIPEPE 126 Query: 353 FTYSPTPVTSGIGIGMSAMGSATRYHTYLPPPYPGSSQAQGGPFQASSPSYHLYYG---- 408 + P P G G T P P S +G PF+ S S+ + Sbjct: 127 VSTQPPPEEPGCG-----------SETVPVPDGPRSDSVEGSPFRPPSHSFSAVFDEDKP 175 Query: 409 -ASAGSY 414 AS+G+Y Sbjct: 176 IASSGTY 182 >gi|13376611 zinc finger protein 703 [Homo sapiens] Length = 590 Score = 37.0 bits (84), Expect = 0.040 Identities = 36/115 (31%), Positives = 44/115 (38%), Gaps = 19/115 (16%) Query: 314 SAELSSRLSTAPDLTAFSDPRQFPALPSISDPRMHYPGAFTYSPTPVTSGIGIGMSAMGS 373 S R +T+ +L S R ALP YPGA SG+G +A + Sbjct: 464 SGPCDKRFATSEEL--LSHLRTHTALPGAEKLLAAYPGA---------SGLGSAAAAAAA 512 Query: 374 ATRYHTYLPPP-YPGS--SQAQGGPFQASSPSYHLYYGASAGSYQFSMVGGERSP 425 A H +LPPP PGS S + P YH Y G S GG P Sbjct: 513 AASCHLHLPPPAAPGSPGSLSLRNPHTLGLSRYHPY-----GKSHLSTAGGLAVP 562 >gi|193083129 MAP/microtubule affinity-regulating kinase 3 isoform d [Homo sapiens] Length = 713 Score = 37.0 bits (84), Expect = 0.040 Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 22/91 (24%) Query: 244 APTPN----PRASLNHSTAFNPQPQSQMQDTRQIQPSPPWSYDQSYQYLGSIASPSV-HP 298 A TP+ PR + + ST F+ QP+ + T Y G ASPS+ H Sbjct: 531 AATPDRIRFPRGTASRST-FHGQPRERRTAT----------------YNGPPASPSLSHE 573 Query: 299 ATPISPGRASGMTTLSAELSSRLSTAPDLTA 329 ATP+S R+ G T L ++L+S+L+ + +++A Sbjct: 574 ATPLSQTRSRGSTNLFSKLTSKLTRSRNVSA 604 >gi|46852166 MAP/microtubule affinity-regulating kinase 3 isoform c [Homo sapiens] Length = 729 Score = 37.0 bits (84), Expect = 0.040 Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 22/91 (24%) Query: 244 APTPN----PRASLNHSTAFNPQPQSQMQDTRQIQPSPPWSYDQSYQYLGSIASPSV-HP 298 A TP+ PR + + ST F+ QP+ + T Y G ASPS+ H Sbjct: 547 AATPDRIRFPRGTASRST-FHGQPRERRTAT----------------YNGPPASPSLSHE 589 Query: 299 ATPISPGRASGMTTLSAELSSRLSTAPDLTA 329 ATP+S R+ G T L ++L+S+L+ + +++A Sbjct: 590 ATPLSQTRSRGSTNLFSKLTSKLTRSRNVSA 620 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.314 0.129 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 21,953,341 Number of Sequences: 37866 Number of extensions: 1187210 Number of successful extensions: 4457 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 26 Number of HSP's successfully gapped in prelim test: 233 Number of HSP's that attempted gapping in prelim test: 4129 Number of HSP's gapped (non-prelim): 513 length of query: 480 length of database: 18,247,518 effective HSP length: 106 effective length of query: 374 effective length of database: 14,233,722 effective search space: 5323412028 effective search space used: 5323412028 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.