Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 19913416
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|19913416 adaptor-related protein complex 2, alpha 1 subunit
isoform 2 [Homo sapiens]
(955 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|19913416 adaptor-related protein complex 2, alpha 1 subunit i... 1885 0.0
gi|19913414 adaptor-related protein complex 2, alpha 1 subunit i... 1873 0.0
gi|27477041 adaptor-related protein complex 2, alpha 2 subunit [... 1538 0.0
gi|71772942 adaptor-related protein complex 1, gamma 1 subunit i... 278 1e-74
gi|71773010 adaptor-related protein complex 1, gamma 1 subunit i... 274 3e-73
gi|4503843 adaptor-related protein complex 1, gamma 2 subunit [H... 260 5e-69
gi|37675283 adaptor-related protein complex 4, epsilon 1 subunit... 169 1e-41
gi|117553580 adaptor-related protein complex 3, delta 1 subunit ... 137 6e-32
gi|22027651 adaptor-related protein complex 1 beta 1 subunit iso... 96 1e-19
gi|22027653 adaptor-related protein complex 1 beta 1 subunit iso... 96 1e-19
gi|4557469 adaptor-related protein complex 2, beta 1 subunit iso... 94 6e-19
gi|71773106 adaptor-related protein complex 2, beta 1 subunit is... 91 5e-18
gi|117553584 adaptor-related protein complex 3, delta 1 subunit ... 68 5e-11
gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo ... 45 4e-04
gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo ... 45 4e-04
gi|122891864 zinc finger protein, subfamily 1A, 4 [Homo sapiens] 42 0.004
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 41 0.006
gi|116292168 KRAB A domain containing 1 [Homo sapiens] 40 0.008
gi|114155127 regulator of G-protein signalling 3 isoform 6 [Homo... 39 0.018
gi|62865651 regulator of G-protein signalling 3 isoform 1 [Homo ... 39 0.018
gi|56118221 amyloid beta (A4) precursor protein-binding, family ... 39 0.018
gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens] 39 0.018
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 39 0.023
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 39 0.023
gi|22547195 sterol regulatory element binding transcription fact... 39 0.030
gi|39812378 RAN binding protein 9 [Homo sapiens] 39 0.030
gi|52630419 sterol regulatory element binding transcription fact... 38 0.040
gi|239754940 PREDICTED: hypothetical protein [Homo sapiens] 38 0.052
gi|165905613 ring finger and KH domain containing 1 [Homo sapiens] 38 0.052
gi|42544243 dynamin 3 isoform a [Homo sapiens] 37 0.067
>gi|19913416 adaptor-related protein complex 2, alpha 1 subunit
isoform 2 [Homo sapiens]
Length = 955
Score = 1885 bits (4884), Expect = 0.0
Identities = 955/955 (100%), Positives = 955/955 (100%)
Query: 1 MPAVSKGDGMRGLAVFISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVC 60
MPAVSKGDGMRGLAVFISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVC
Sbjct: 1 MPAVSKGDGMRGLAVFISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVC 60
Query: 61 KLLFIFLLGHDIDFGHMEAVNLLSSNKYTEKQIGYLFISVLVNSNSELIRLINNAIKNDL 120
KLLFIFLLGHDIDFGHMEAVNLLSSNKYTEKQIGYLFISVLVNSNSELIRLINNAIKNDL
Sbjct: 61 KLLFIFLLGHDIDFGHMEAVNLLSSNKYTEKQIGYLFISVLVNSNSELIRLINNAIKNDL 120
Query: 121 ASRNPTFMCLALHCIANVGSREMGEAFAADIPRILVAGDSMDSVKQSAALCLLRLYKASP 180
ASRNPTFMCLALHCIANVGSREMGEAFAADIPRILVAGDSMDSVKQSAALCLLRLYKASP
Sbjct: 121 ASRNPTFMCLALHCIANVGSREMGEAFAADIPRILVAGDSMDSVKQSAALCLLRLYKASP 180
Query: 181 DLVPMGEWTARVVHLLNDQHMGVVTAAVSLITCLCKKNPDDFKTCVSLAVSRLSRIVSSA 240
DLVPMGEWTARVVHLLNDQHMGVVTAAVSLITCLCKKNPDDFKTCVSLAVSRLSRIVSSA
Sbjct: 181 DLVPMGEWTARVVHLLNDQHMGVVTAAVSLITCLCKKNPDDFKTCVSLAVSRLSRIVSSA 240
Query: 241 STDLQDYTYYFVPAPWLSVKLLRLLQCYPPPEDAAVKGRLVECLETVLNKAQEPPKSKKV 300
STDLQDYTYYFVPAPWLSVKLLRLLQCYPPPEDAAVKGRLVECLETVLNKAQEPPKSKKV
Sbjct: 241 STDLQDYTYYFVPAPWLSVKLLRLLQCYPPPEDAAVKGRLVECLETVLNKAQEPPKSKKV 300
Query: 301 QHSNAKNAILFETISLIIHYDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSE 360
QHSNAKNAILFETISLIIHYDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSE
Sbjct: 301 QHSNAKNAILFETISLIIHYDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSE 360
Query: 361 FSHEAVKTHIDTVINALKTERDVSVRQRAADLLYAMCDRSNAKQIVSEMLRYLETADYAI 420
FSHEAVKTHIDTVINALKTERDVSVRQRAADLLYAMCDRSNAKQIVSEMLRYLETADYAI
Sbjct: 361 FSHEAVKTHIDTVINALKTERDVSVRQRAADLLYAMCDRSNAKQIVSEMLRYLETADYAI 420
Query: 421 REEIVLKVAILAEKYAVDYSWYVDTILNLIRIAGDYVSEEVWYRVLQIVTNRDDVQGYAA 480
REEIVLKVAILAEKYAVDYSWYVDTILNLIRIAGDYVSEEVWYRVLQIVTNRDDVQGYAA
Sbjct: 421 REEIVLKVAILAEKYAVDYSWYVDTILNLIRIAGDYVSEEVWYRVLQIVTNRDDVQGYAA 480
Query: 481 KTVFEALQAPACHENMVKVGGYILGEFGNLIAGDPRSSPPVQFSLLHSKFHLCSVATRAL 540
KTVFEALQAPACHENMVKVGGYILGEFGNLIAGDPRSSPPVQFSLLHSKFHLCSVATRAL
Sbjct: 481 KTVFEALQAPACHENMVKVGGYILGEFGNLIAGDPRSSPPVQFSLLHSKFHLCSVATRAL 540
Query: 541 LLSTYIKFINLFPETKATIQGVLRAGSQLRNADVELQQRAVEYLTLSSVASTDVLATVLE 600
LLSTYIKFINLFPETKATIQGVLRAGSQLRNADVELQQRAVEYLTLSSVASTDVLATVLE
Sbjct: 541 LLSTYIKFINLFPETKATIQGVLRAGSQLRNADVELQQRAVEYLTLSSVASTDVLATVLE 600
Query: 601 EMPPFPERESSILAKLKRKKGPGAGSALDDGRRDPSSNDINGGMEPTPSTVSTPSPSADL 660
EMPPFPERESSILAKLKRKKGPGAGSALDDGRRDPSSNDINGGMEPTPSTVSTPSPSADL
Sbjct: 601 EMPPFPERESSILAKLKRKKGPGAGSALDDGRRDPSSNDINGGMEPTPSTVSTPSPSADL 660
Query: 661 LGLRAAPPPAAPPASAGAGNLLVDVFDGPAAQPSLGPTPEEAFLSPGPEDIGPPIPEADE 720
LGLRAAPPPAAPPASAGAGNLLVDVFDGPAAQPSLGPTPEEAFLSPGPEDIGPPIPEADE
Sbjct: 661 LGLRAAPPPAAPPASAGAGNLLVDVFDGPAAQPSLGPTPEEAFLSPGPEDIGPPIPEADE 720
Query: 721 LLNKFVCKNNGVLFENQLLQIGVKSEFRQNLGRMYLFYGNKTSVQFQNFSPTVVHPGDLQ 780
LLNKFVCKNNGVLFENQLLQIGVKSEFRQNLGRMYLFYGNKTSVQFQNFSPTVVHPGDLQ
Sbjct: 721 LLNKFVCKNNGVLFENQLLQIGVKSEFRQNLGRMYLFYGNKTSVQFQNFSPTVVHPGDLQ 780
Query: 781 TQLAVQTKRVAAQVDGGAQVQQVLNIECLRDFLTPPLLSVRFRYGGAPQALTLKLPVTIN 840
TQLAVQTKRVAAQVDGGAQVQQVLNIECLRDFLTPPLLSVRFRYGGAPQALTLKLPVTIN
Sbjct: 781 TQLAVQTKRVAAQVDGGAQVQQVLNIECLRDFLTPPLLSVRFRYGGAPQALTLKLPVTIN 840
Query: 841 KFFQPTEMAAQDFFQRWKQLSLPQQEAQKIFKANHPMDAEVTKAKLLGFGSALLDNVDPN 900
KFFQPTEMAAQDFFQRWKQLSLPQQEAQKIFKANHPMDAEVTKAKLLGFGSALLDNVDPN
Sbjct: 841 KFFQPTEMAAQDFFQRWKQLSLPQQEAQKIFKANHPMDAEVTKAKLLGFGSALLDNVDPN 900
Query: 901 PENFVGAGIIQTKALQVGCLLRLEPNAQAQMYRLTLRTSKEPVSRHLCELLAQQF 955
PENFVGAGIIQTKALQVGCLLRLEPNAQAQMYRLTLRTSKEPVSRHLCELLAQQF
Sbjct: 901 PENFVGAGIIQTKALQVGCLLRLEPNAQAQMYRLTLRTSKEPVSRHLCELLAQQF 955
>gi|19913414 adaptor-related protein complex 2, alpha 1 subunit
isoform 1 [Homo sapiens]
Length = 977
Score = 1873 bits (4851), Expect = 0.0
Identities = 955/977 (97%), Positives = 955/977 (97%), Gaps = 22/977 (2%)
Query: 1 MPAVSKGDGMRGLAVFISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVC 60
MPAVSKGDGMRGLAVFISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVC
Sbjct: 1 MPAVSKGDGMRGLAVFISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVC 60
Query: 61 KLLFIFLLGHDIDFGHMEAVNLLSSNKYTEKQIGYLFISVLVNSNSELIRLINNAIKNDL 120
KLLFIFLLGHDIDFGHMEAVNLLSSNKYTEKQIGYLFISVLVNSNSELIRLINNAIKNDL
Sbjct: 61 KLLFIFLLGHDIDFGHMEAVNLLSSNKYTEKQIGYLFISVLVNSNSELIRLINNAIKNDL 120
Query: 121 ASRNPTFMCLALHCIANVGSREMGEAFAADIPRILVAGDSMDSVKQSAALCLLRLYKASP 180
ASRNPTFMCLALHCIANVGSREMGEAFAADIPRILVAGDSMDSVKQSAALCLLRLYKASP
Sbjct: 121 ASRNPTFMCLALHCIANVGSREMGEAFAADIPRILVAGDSMDSVKQSAALCLLRLYKASP 180
Query: 181 DLVPMGEWTARVVHLLNDQHMGVVTAAVSLITCLCKKNPDDFKTCVSLAVSRLSRIVSSA 240
DLVPMGEWTARVVHLLNDQHMGVVTAAVSLITCLCKKNPDDFKTCVSLAVSRLSRIVSSA
Sbjct: 181 DLVPMGEWTARVVHLLNDQHMGVVTAAVSLITCLCKKNPDDFKTCVSLAVSRLSRIVSSA 240
Query: 241 STDLQDYTYYFVPAPWLSVKLLRLLQCYPPPEDAAVKGRLVECLETVLNKAQEPPKSKKV 300
STDLQDYTYYFVPAPWLSVKLLRLLQCYPPPEDAAVKGRLVECLETVLNKAQEPPKSKKV
Sbjct: 241 STDLQDYTYYFVPAPWLSVKLLRLLQCYPPPEDAAVKGRLVECLETVLNKAQEPPKSKKV 300
Query: 301 QHSNAKNAILFETISLIIHYDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSE 360
QHSNAKNAILFETISLIIHYDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSE
Sbjct: 301 QHSNAKNAILFETISLIIHYDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSE 360
Query: 361 FSHEAVKTHIDTVINALKTERDVSVRQRAADLLYAMCDRSNAKQIVSEMLRYLETADYAI 420
FSHEAVKTHIDTVINALKTERDVSVRQRAADLLYAMCDRSNAKQIVSEMLRYLETADYAI
Sbjct: 361 FSHEAVKTHIDTVINALKTERDVSVRQRAADLLYAMCDRSNAKQIVSEMLRYLETADYAI 420
Query: 421 REEIVLKVAILAEKYAVDYSWYVDTILNLIRIAGDYVSEEVWYRVLQIVTNRDDVQGYAA 480
REEIVLKVAILAEKYAVDYSWYVDTILNLIRIAGDYVSEEVWYRVLQIVTNRDDVQGYAA
Sbjct: 421 REEIVLKVAILAEKYAVDYSWYVDTILNLIRIAGDYVSEEVWYRVLQIVTNRDDVQGYAA 480
Query: 481 KTVFEALQAPACHENMVKVGGYILGEFGNLIAGDPRSSPPVQFSLLHSKFHLCSVATRAL 540
KTVFEALQAPACHENMVKVGGYILGEFGNLIAGDPRSSPPVQFSLLHSKFHLCSVATRAL
Sbjct: 481 KTVFEALQAPACHENMVKVGGYILGEFGNLIAGDPRSSPPVQFSLLHSKFHLCSVATRAL 540
Query: 541 LLSTYIKFINLFPETKATIQGVLRAGSQLRNADVELQQRAVEYLTLSSVASTDVLATVLE 600
LLSTYIKFINLFPETKATIQGVLRAGSQLRNADVELQQRAVEYLTLSSVASTDVLATVLE
Sbjct: 541 LLSTYIKFINLFPETKATIQGVLRAGSQLRNADVELQQRAVEYLTLSSVASTDVLATVLE 600
Query: 601 EMPPFPERESSILAKLKRKKGPGAGSALDDGRRDPSSNDINGGMEPTPSTVSTPSPSADL 660
EMPPFPERESSILAKLKRKKGPGAGSALDDGRRDPSSNDINGGMEPTPSTVSTPSPSADL
Sbjct: 601 EMPPFPERESSILAKLKRKKGPGAGSALDDGRRDPSSNDINGGMEPTPSTVSTPSPSADL 660
Query: 661 LGLRAAPPPAAPPASAGAGNLLVDVFDGPAAQPSLGPTPEEAFLS--------------- 705
LGLRAAPPPAAPPASAGAGNLLVDVFDGPAAQPSLGPTPEEAFLS
Sbjct: 661 LGLRAAPPPAAPPASAGAGNLLVDVFDGPAAQPSLGPTPEEAFLSELEPPAPESPMALLA 720
Query: 706 -------PGPEDIGPPIPEADELLNKFVCKNNGVLFENQLLQIGVKSEFRQNLGRMYLFY 758
PGPEDIGPPIPEADELLNKFVCKNNGVLFENQLLQIGVKSEFRQNLGRMYLFY
Sbjct: 721 DPAPAADPGPEDIGPPIPEADELLNKFVCKNNGVLFENQLLQIGVKSEFRQNLGRMYLFY 780
Query: 759 GNKTSVQFQNFSPTVVHPGDLQTQLAVQTKRVAAQVDGGAQVQQVLNIECLRDFLTPPLL 818
GNKTSVQFQNFSPTVVHPGDLQTQLAVQTKRVAAQVDGGAQVQQVLNIECLRDFLTPPLL
Sbjct: 781 GNKTSVQFQNFSPTVVHPGDLQTQLAVQTKRVAAQVDGGAQVQQVLNIECLRDFLTPPLL 840
Query: 819 SVRFRYGGAPQALTLKLPVTINKFFQPTEMAAQDFFQRWKQLSLPQQEAQKIFKANHPMD 878
SVRFRYGGAPQALTLKLPVTINKFFQPTEMAAQDFFQRWKQLSLPQQEAQKIFKANHPMD
Sbjct: 841 SVRFRYGGAPQALTLKLPVTINKFFQPTEMAAQDFFQRWKQLSLPQQEAQKIFKANHPMD 900
Query: 879 AEVTKAKLLGFGSALLDNVDPNPENFVGAGIIQTKALQVGCLLRLEPNAQAQMYRLTLRT 938
AEVTKAKLLGFGSALLDNVDPNPENFVGAGIIQTKALQVGCLLRLEPNAQAQMYRLTLRT
Sbjct: 901 AEVTKAKLLGFGSALLDNVDPNPENFVGAGIIQTKALQVGCLLRLEPNAQAQMYRLTLRT 960
Query: 939 SKEPVSRHLCELLAQQF 955
SKEPVSRHLCELLAQQF
Sbjct: 961 SKEPVSRHLCELLAQQF 977
>gi|27477041 adaptor-related protein complex 2, alpha 2 subunit
[Homo sapiens]
Length = 939
Score = 1538 bits (3982), Expect = 0.0
Identities = 784/959 (81%), Positives = 852/959 (88%), Gaps = 24/959 (2%)
Query: 1 MPAVSKGDGMRGLAVFISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVC 60
MPAVSKGDGMRGLAVFISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVC
Sbjct: 1 MPAVSKGDGMRGLAVFISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVC 60
Query: 61 KLLFIFLLGHDIDFGHMEAVNLLSSNKYTEKQIGYLFISVLVNSNSELIRLINNAIKNDL 120
KLLFIFLLGHDIDFGHMEAVNLLSSN+YTEKQIGYLFISVLVNSNSELIRLINNAIKNDL
Sbjct: 61 KLLFIFLLGHDIDFGHMEAVNLLSSNRYTEKQIGYLFISVLVNSNSELIRLINNAIKNDL 120
Query: 121 ASRNPTFMCLALHCIANVGSREMGEAFAADIPRILVAGDSMDSVKQSAALCLLRLYKASP 180
ASRNPTFM LALHCIA+VGSREM EAFA +IP++LVAGD+MDSVKQSAALCLLRLY+ SP
Sbjct: 121 ASRNPTFMGLALHCIASVGSREMAEAFAGEIPKVLVAGDTMDSVKQSAALCLLRLYRTSP 180
Query: 181 DLVPMGEWTARVVHLLNDQHMGVVTAAVSLITCLCKKNPDDFKTCVSLAVSRLSRIVSSA 240
DLVPMG+WT+RVVHLLNDQH+GVVTAA SLIT L +KNP++FKT VSLAVSRLSRIV+SA
Sbjct: 181 DLVPMGDWTSRVVHLLNDQHLGVVTAATSLITTLAQKNPEEFKTSVSLAVSRLSRIVTSA 240
Query: 241 STDLQDYTYYFVPAPWLSVKLLRLLQCYPPPEDAAVKGRLVECLETVLNKAQEPPKSKKV 300
STDLQDYTYYFVPAPWLSVKLLRLLQCYPPP D AV+GRL ECLET+LNKAQEPPKSKKV
Sbjct: 241 STDLQDYTYYFVPAPWLSVKLLRLLQCYPPP-DPAVRGRLTECLETILNKAQEPPKSKKV 299
Query: 301 QHSNAKNAILFETISLIIHYDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSE 360
QHSNAKNA+LFE ISLIIH+DSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSE
Sbjct: 300 QHSNAKNAVLFEAISLIIHHDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSE 359
Query: 361 FSHEAVKTHIDTVINALKTERDVSVRQRAADLLYAMCDRSNAKQIVSEMLRYLETADYAI 420
FSHEAVKTHI+TVINALKTERDVSVRQRA DLLYAMCDRSNA QIV+EML YLETADY+I
Sbjct: 360 FSHEAVKTHIETVINALKTERDVSVRQRAVDLLYAMCDRSNAPQIVAEMLSYLETADYSI 419
Query: 421 REEIVLKVAILAEKYAVDYSWYVDTILNLIRIAGDYVSEEVWYRVLQIVTNRDDVQGYAA 480
REEIVLKVAILAEKYAVDY+WYVDTILNLIRIAGDYVSEEVWYRV+QIV NRDDVQGYAA
Sbjct: 420 REEIVLKVAILAEKYAVDYTWYVDTILNLIRIAGDYVSEEVWYRVIQIVINRDDVQGYAA 479
Query: 481 KTVFEALQAPACHENMVKVGGYILGEFGNLIAGDPRSSPPVQFSLLHSKFHLCSVATRAL 540
KTVFEALQAPACHEN+VKVGGYILGEFGNLIAGDPRSSP +QF LLHSKFHLCSV TRAL
Sbjct: 480 KTVFEALQAPACHENLVKVGGYILGEFGNLIAGDPRSSPLIQFHLLHSKFHLCSVPTRAL 539
Query: 541 LLSTYIKFINLFPETKATIQGVLRAGSQLRNADVELQQRAVEYLTLSSVASTDVLATVLE 600
LLSTYIKF+NLFPE K TIQ VLR+ SQLRNADVELQQRAVEYL LS+VASTD+LATVLE
Sbjct: 540 LLSTYIKFVNLFPEVKPTIQDVLRSDSQLRNADVELQQRAVEYLRLSTVASTDILATVLE 599
Query: 601 EMPPFPERESSILAKLKRKKGPGAGSALDDGRRDPSSNDINGGMEPTP---STVSTPSPS 657
EMPPFPERESSILAKLK+KKGP + L+D +RD S D+NGG EP P S VSTPSPS
Sbjct: 600 EMPPFPERESSILAKLKKKKGPSTVTDLEDTKRD-RSVDVNGGPEPAPASTSAVSTPSPS 658
Query: 658 ADLLGLRAAPP-PAAPPASAGAGNLLVDVFDGPAAQPSLGPTPEEAFLSPGPEDIGPPIP 716
ADLLGL AAPP PA PP S+G LLVDVF A+ + P P
Sbjct: 659 ADLLGLGAAPPAPAGPPPSSGGSGLLVDVFSDSASV------------------VAPLAP 700
Query: 717 EADELLNKFVCKNNGVLFENQLLQIGVKSEFRQNLGRMYLFYGNKTSVQFQNFSPTVVHP 776
+++ +FVCKNNGVLFENQLLQIG+KSEFRQNLGRM++FYGNKTS QF NF+PT++
Sbjct: 701 GSEDNFARFVCKNNGVLFENQLLQIGLKSEFRQNLGRMFIFYGNKTSTQFLNFTPTLICS 760
Query: 777 GDLQTQLAVQTKRVAAQVDGGAQVQQVLNIECLRDFLTPPLLSVRFRYGGAPQALTLKLP 836
DLQ L +QTK V V+GGAQVQQV+NIEC+ DF P+L+++FRYGG Q ++++LP
Sbjct: 761 DDLQPNLNLQTKPVDPTVEGGAQVQQVVNIECVSDFTEAPVLNIQFRYGGTFQNVSVQLP 820
Query: 837 VTINKFFQPTEMAAQDFFQRWKQLSLPQQEAQKIFKANHPMDAEVTKAKLLGFGSALLDN 896
+T+NKFFQPTEMA+QDFFQRWKQLS PQQE Q IFKA HPMD EVTKAK++GFGSALL+
Sbjct: 821 ITLNKFFQPTEMASQDFFQRWKQLSNPQQEVQNIFKAKHPMDTEVTKAKIIGFGSALLEE 880
Query: 897 VDPNPENFVGAGIIQTKALQVGCLLRLEPNAQAQMYRLTLRTSKEPVSRHLCELLAQQF 955
VDPNP NFVGAGII TK Q+GCLLRLEPN QAQMYRLTLRTSKE VS+ LCELL+ QF
Sbjct: 881 VDPNPANFVGAGIIHTKTTQIGCLLRLEPNLQAQMYRLTLRTSKEAVSQRLCELLSAQF 939
>gi|71772942 adaptor-related protein complex 1, gamma 1 subunit
isoform b [Homo sapiens]
Length = 822
Score = 278 bits (712), Expect = 1e-74
Identities = 211/714 (29%), Positives = 372/714 (52%), Gaps = 58/714 (8%)
Query: 13 LAVFISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVCKLLFIFLLGHDI 72
L I IR +++ E + I KE A IRS F+ + D + + V KLL++ +LG+
Sbjct: 7 LRELIRTIRTARTQAEEREMIQKECAAIRSSFREE---DNTYRCRNVAKLLYMHMLGYPA 63
Query: 73 DFGHMEAVNLLSSNKYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTFMCLAL 132
FG +E + L++S K+T+K+IGYL +L++ ++ L+ N IKNDL LAL
Sbjct: 64 HFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQFVQGLAL 123
Query: 133 HCIANVGSREMGEAFAADIPRILVAGDSMDSVKQSAALCLLRLYKASPDLVPMGEWTARV 192
+ +GS EM A ++ ++L +S +++ AALC + + + P+L+ M +
Sbjct: 124 CTLGCMGSSEMCRDLAGEVEKLLKTSNSY--LRKKAALCAVHVIRKVPELMEM--FLPAT 179
Query: 193 VHLLNDQHMGVVTAAVSLITCLCKKNPD---DFKTCVSLAVSRLSRIVSSASTDLQDYTY 249
+LLN+++ GV+ +V L+T +C+++PD F+ V V L ++ S + D +
Sbjct: 180 KNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSG 239
Query: 250 YFVPAPWLSVKLLRLLQCYPPPEDAAVKGRLVECLETVLNKAQEPPKSKKVQHSNAKNAI 309
+ P+L V++LRLL+ +D + E + +L + ++ K N NAI
Sbjct: 240 --ISDPFLQVRILRLLRILGRNDDDSS-----EAMNDILAQVATNTETSK----NVGNAI 288
Query: 310 LFETISLIIHYDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSEFSHEAVKTH 369
L+ET+ I+ SE L V A N LG+FL + + N+RY+AL S+ L + + H AV+ H
Sbjct: 289 LYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSL--LKTVQTDHNAVQRH 346
Query: 370 IDTVINALKTERDVSVRQRAADLLYAMCDRSNAKQIVSEMLRYLETADYAIREEIVLKVA 429
T+++ LK + DVS+++RA +L +A+ + +N + ++ E+L +L++ + + + +
Sbjct: 347 RSTIVDCLK-DLDVSIKRRAMELSFALVNGNNIRGMMKELLYFLDSCEPEFKADCASGIF 405
Query: 430 ILAEKYAVDYSWYVDTILNLIRIAGDYVSEEVWYRVLQIVTNRDDVQGYAAKTVFEALQA 489
+ AEKYA W++DTI+ ++ AG YV ++ ++Q++TN ++ Y + +++A+
Sbjct: 406 LAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILG 465
Query: 490 PACHENMVKVGGYILGEFGN-LIAGDPRSSPPVQ------FSLLHSKF--HLCSVATRAL 540
+ +V+V + +GE+G+ L++G P+Q +L S ++ + TR
Sbjct: 466 DYSQQPLVQVAAWCIGEYGDLLVSGQCEEEEPIQVTEDEVLDILESVLISNMSTSVTRGY 525
Query: 541 LLSTYIKFINLFPETKATIQGVLRA-GSQLRNADVELQQRAVEYLTLSSVASTDVLATVL 599
L+ +K F T I+ V+ GS + DVELQQRAVEY L + + +L
Sbjct: 526 ALTAIMKLSTRFTCTVNRIKKVVSIYGSSI---DVELQQRAVEYNALFK-KYDHMRSALL 581
Query: 600 EEMPPFPERESSILAKLKRKKGPGAGSALD----DGRRDPSSN-----DINGGMEPTP-- 648
E MP + ++ ++ + G + L+ P+S D+ GG + TP
Sbjct: 582 ERMPVMEKVTTNGPTEIVQTNGETEPAPLETKPPPSGPQPTSQANDLLDLLGGNDITPVI 641
Query: 649 STVSTPSPSA------DLLG---LRAAPPPAAPPASAGAGNLLVDVFDGPAAQP 693
T T PS+ DLLG L AP A PAS + + DG ++QP
Sbjct: 642 PTAPTSKPSSAGGELLDLLGDINLTGAPAAAPAPASVPQISQPPFLLDGLSSQP 695
>gi|71773010 adaptor-related protein complex 1, gamma 1 subunit
isoform a [Homo sapiens]
Length = 825
Score = 274 bits (700), Expect = 3e-73
Identities = 210/717 (29%), Positives = 371/717 (51%), Gaps = 61/717 (8%)
Query: 13 LAVFISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVCKLLFIFLLGHDI 72
L I IR +++ E + I KE A IRS F+ + D + + V KLL++ +LG+
Sbjct: 7 LRELIRTIRTARTQAEEREMIQKECAAIRSSFREE---DNTYRCRNVAKLLYMHMLGYPA 63
Query: 73 DFGHMEAVNLLSSNKYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTFMCLAL 132
FG +E + L++S K+T+K+IGYL +L++ ++ L+ N IKNDL LAL
Sbjct: 64 HFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQFVQGLAL 123
Query: 133 HCIANVGSREMGEAFAADIPRILVAGDSMDSVKQSAALCLLRLYKASPDLVPMGEWTARV 192
+ +GS EM A ++ ++L +S +++ AALC + + + P+L+ M +
Sbjct: 124 CTLGCMGSSEMCRDLAGEVEKLLKTSNSY--LRKKAALCAVHVIRKVPELMEM--FLPAT 179
Query: 193 VHLLNDQHMGVVTAAVSLITCLCKKNPDDF------KTCVSLAVSRLSRIVSSASTDLQD 246
+LLN+++ GV+ +V L+T +C+++PD + V V L ++ S + D
Sbjct: 180 KNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKNEKLVPQLVRILKNLIMSGYSPEHD 239
Query: 247 YTYYFVPAPWLSVKLLRLLQCYPPPEDAAVKGRLVECLETVLNKAQEPPKSKKVQHSNAK 306
+ + P+L V++LRLL+ +D + E + +L + ++ K N
Sbjct: 240 VSG--ISDPFLQVRILRLLRILGRNDDDSS-----EAMNDILAQVATNTETSK----NVG 288
Query: 307 NAILFETISLIIHYDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSEFSHEAV 366
NAIL+ET+ I+ SE L V A N LG+FL + + N+RY+AL S+ L + + H AV
Sbjct: 289 NAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSL--LKTVQTDHNAV 346
Query: 367 KTHIDTVINALKTERDVSVRQRAADLLYAMCDRSNAKQIVSEMLRYLETADYAIREEIVL 426
+ H T+++ LK + DVS+++RA +L +A+ + +N + ++ E+L +L++ + + +
Sbjct: 347 QRHRSTIVDCLK-DLDVSIKRRAMELSFALVNGNNIRGMMKELLYFLDSCEPEFKADCAS 405
Query: 427 KVAILAEKYAVDYSWYVDTILNLIRIAGDYVSEEVWYRVLQIVTNRDDVQGYAAKTVFEA 486
+ + AEKYA W++DTI+ ++ AG YV ++ ++Q++TN ++ Y + +++A
Sbjct: 406 GIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKA 465
Query: 487 LQAPACHENMVKVGGYILGEFGN-LIAGDPRSSPPVQ------FSLLHSKF--HLCSVAT 537
+ + +V+V + +GE+G+ L++G P+Q +L S ++ + T
Sbjct: 466 ILGDYSQQPLVQVAAWCIGEYGDLLVSGQCEEEEPIQVTEDEVLDILESVLISNMSTSVT 525
Query: 538 RALLLSTYIKFINLFPETKATIQGVLRA-GSQLRNADVELQQRAVEYLTLSSVASTDVLA 596
R L+ +K F T I+ V+ GS + DVELQQRAVEY L + +
Sbjct: 526 RGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSI---DVELQQRAVEYNALFK-KYDHMRS 581
Query: 597 TVLEEMPPFPERESSILAKLKRKKGPGAGSALD----DGRRDPSSN-----DINGGMEPT 647
+LE MP + ++ ++ + G + L+ P+S D+ GG + T
Sbjct: 582 ALLERMPVMEKVTTNGPTEIVQTNGETEPAPLETKPPPSGPQPTSQANDLLDLLGGNDIT 641
Query: 648 P--STVSTPSPSA------DLLG---LRAAPPPAAPPASAGAGNLLVDVFDGPAAQP 693
P T T PS+ DLLG L AP A PAS + + DG ++QP
Sbjct: 642 PVIPTAPTSKPSSAGGELLDLLGDINLTGAPAAAPAPASVPQISQPPFLLDGLSSQP 698
>gi|4503843 adaptor-related protein complex 1, gamma 2 subunit [Homo
sapiens]
Length = 785
Score = 260 bits (664), Expect = 5e-69
Identities = 201/697 (28%), Positives = 344/697 (49%), Gaps = 52/697 (7%)
Query: 17 ISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVCKLLFIFLLGHDIDFGH 76
I +IR K++ E + I KE A+IR+ F+ D + + + KLL++ +LG+ FG
Sbjct: 12 IEEIRGAKTQAQEREVIQKECAHIRASFRDG---DPVHRHRQLAKLLYVHMLGYPAHFGQ 68
Query: 77 MEAVNLLSSNKYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTFMCLALHCIA 136
ME + L++S+++T+K++GYL +L++ + LI N+IKNDL+ LAL ++
Sbjct: 69 MECLKLIASSRFTDKRVGYLGAMLLLDERHDAHLLITNSIKNDLSQGIQPVQGLALCTLS 128
Query: 137 NVGSREMGEAFAADIPRILVAGDSMDSVKQSAALCLLRLYKASPDLVPMGEWTARVVHLL 196
+GS EM A ++ ++L+ V++ A L + + + P+L + + LL
Sbjct: 129 TMGSAEMCRDLAPEVEKLLLQPSPY--VRKKAILTAVHMIRKVPELSSV--FLPPCAQLL 184
Query: 197 NDQHMGVVTAAVSLITCLCKKNPD---DFKTCVSLAVSRLSRIVSSASTDLQDYTYYFVP 253
+++H G++ ++LIT LC+++P F+ V V L +V+ + +++ V
Sbjct: 185 HERHHGILLGTITLITELCERSPAALRHFRKVVPQLVHILRTLVTMGYST--EHSISGVS 242
Query: 254 APWLSVKLLRLLQCYPPPEDAAVKGRLVECLETVLNKAQEPPKSKKVQHSNAKNAILFET 313
P+L V++LRLL+ + GR E +N + NA NA+LFET
Sbjct: 243 DPFLQVQILRLLR---------ILGRNHEESSETMNDLLAQVATNTDTSRNAGNAVLFET 293
Query: 314 ISLIIHYDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSEFSHEAVKTHIDTV 373
+ I+ S L V A N LG+FL + + N+RY+AL S+ L S+ H AV+ H TV
Sbjct: 294 VLTIMDIRSAAGLRVLAVNILGRFLLNSDRNIRYVALTSLLRLVQSD--HSAVQRHRPTV 351
Query: 374 INALKTERDVSVRQRAADLLYAMCDRSNAKQIVSEMLRYLETADYAIREEIVLKVAILAE 433
+ L+ E D S+ +RA +L A+ + SN + ++ E+ +LE+ +R + + + AE
Sbjct: 352 VECLR-ETDASLSRRALELSLALVNSSNVRAMMQELQAFLESCPPDLRADCASGILLAAE 410
Query: 434 KYAVDYSWYVDTILNLIRIAGDYVSEEVWYRVLQIVTNRDDVQGYAAKTVFEALQAPACH 493
++A W++DTIL+++ AG +V ++ + Q++ ++ Y+ + ++ AL
Sbjct: 411 RFAPTKRWHIDTILHVLTTAGTHVRDDAVANLTQLIGGAQELHAYSVRRLYNALAEDISQ 470
Query: 494 ENMVKVGGYILGEFGN-LIAGDPRSSPPVQ------FSLLHS--KFHLCSVATRALLLST 544
+ +V+V + +GE+G+ L+AG+ P+Q +LL + H+ ATR L+
Sbjct: 471 QPLVQVAAWCIGEYGDLLLAGNCEEIEPLQVDEEEVLALLEKVLQSHMSLPATRGYALTA 530
Query: 545 YIKF-INLFPETKATIQGVLRAGSQLRNADVELQQRAVEYLTLSSVASTDVLATVLEEMP 603
+K L + Q V GS L DVELQQRAVEY TL + A +LE+MP
Sbjct: 531 LMKLSTRLCGDNNRIRQVVSIYGSCL---DVELQQRAVEYDTLFR-KYDHMRAAILEKMP 586
Query: 604 PFPERESSILAKLKRKKGPGAGSALDDGRRDPSSNDINGGMEPTPSTVSTPSPSADLLGL 663
L + GP A + + ++ PT S DLL
Sbjct: 587 ------------LVERDGPQADEEAKESKEAAQLSE--AAPVPTEPQASQLLDLLDLLDG 632
Query: 664 RAAPPPAAPPASAGAGNLLVDVFDGPAAQPSLGPTPE 700
+ P G LV + D P P P P+
Sbjct: 633 ASGDVQHPPHLDPSPGGALVHLLDLPCVPPPPAPIPD 669
>gi|37675283 adaptor-related protein complex 4, epsilon 1 subunit
[Homo sapiens]
Length = 1137
Score = 169 bits (427), Expect = 1e-41
Identities = 135/523 (25%), Positives = 247/523 (47%), Gaps = 35/523 (6%)
Query: 2 PAVSKGDGMRGLAVFISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVCK 61
PA +K L + I SK E K I +EL+++++ K+ V +
Sbjct: 25 PAAAKASFSSRLGSLVRGITALTSKHEEEKLIQQELSSLKATVSAPTTTLKMMKECMV-R 83
Query: 62 LLFIFLLGHDIDFGHMEAVNLLSSNKYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLA 121
L++ +LG+D FG++ A+ L EK++GYL +S+ ++ + EL+ L+ N + DL
Sbjct: 84 LIYCEMLGYDASFGYIHAIKLAQQGNLLEKRVGYLAVSLFLHESHELLLLLVNTVVKDLQ 143
Query: 122 SRNPTFMCLALHCIANVGSREMGEAFAADIPRILVAGDSMDSVKQSAALCLLRLYKASPD 181
S N +C+AL ++ + EM A I L S + V++ A L L + + +P+
Sbjct: 144 STNLVEVCMALTVVSQIFPCEMIPAVLPLIEDKL--QHSKEIVRRKAVLALYKFHLIAPN 201
Query: 182 LVPMGEWTARVVHLLNDQHMGVVTAAVSLITCLCKKNPDDFKTCVSLAVSRLSRIVSSAS 241
V R L D+ +GV+ A++ + + K+N +K V+ L ++V
Sbjct: 202 QVQHIHIKFR--KALCDRDVGVMAASLHIYLRMIKENSSGYKDLTGSFVTILKQVVGGKL 259
Query: 242 TDLQDYTYYFVPAPWLSVKLLRLLQCYPPPEDAAVKGRLVECLETVLNKAQEPPKSKKVQ 301
++ Y+ VPAPWL ++LLR+L +D + + L+ L +A+
Sbjct: 260 P--VEFNYHSVPAPWLQIQLLRILGLL-GKDDQRTSELMYDVLDESLRRAE--------L 308
Query: 302 HSNAKNAILFETISLIIHYDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSEF 361
+ N AILFE + + + LL +A +G+F+ + NL+YL L+++ + +
Sbjct: 309 NHNVTYAILFECVHTVYSIYPKSELLEKAAKCIGKFVLSPKINLKYLGLKALTYVIQQD- 367
Query: 362 SHEAVKTHIDTVINALKTERDVSVRQRAADLLYAMCDRSNAKQIVSEMLRYL-ETADYAI 420
H T+I L D +++ +LLY + + N IV +ML YL ++ + +
Sbjct: 368 -PTLALQHQMTIIECL-DHPDPIIKRETLELLYRITNAQNITVIVQKMLEYLHQSKEEYV 425
Query: 421 REEIVLKVAILAEKYAVDYSWYVDTILNLIRIAGDYVSEEVWYRVLQIVTNRDD------ 474
+V K+A LAEKYA D +W++ T+ + + GD + ++ L+++ D
Sbjct: 426 IVNLVGKIAELAEKYAPDNAWFIQTMNAVFSVGGDVMHPDIPNNFLRLLAEGFDDETEDQ 485
Query: 475 ------VQGYAAKTVFEALQAPACHENMVKVGGYILGEFGNLI 511
VQ Y E + P + ++V ++LGE+ L+
Sbjct: 486 QLRLYAVQSYLTLLDMENVFYP---QRFLQVMSWVLGEYSYLL 525
>gi|117553580 adaptor-related protein complex 3, delta 1 subunit
isoform 2 [Homo sapiens]
Length = 1153
Score = 137 bits (344), Expect = 6e-32
Identities = 118/492 (23%), Positives = 235/492 (47%), Gaps = 55/492 (11%)
Query: 11 RGLAVFISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVCKLLFIFLLGH 70
+ L + IRN KE E K I++ + I+ + K D K VCKL ++ +LG+
Sbjct: 16 KNLQDLVRGIRN--HKEDEAKYISQCIDEIKQELKQDNIA---VKANAVCKLTYLQMLGY 70
Query: 71 DIDFGHMEAVNLLSSNKYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTFMCL 130
DI + + ++S++K+T K+IGYL S + +++I L N I+ DL+S + +
Sbjct: 71 DISWAAFNIIEVMSASKFTFKRIGYLAASQSFHEGTDVIMLTTNQIRKDLSSPSQYDTGV 130
Query: 131 ALHCIANVGSREMGEAFAADIPRILVAGDSMDSVKQSAALCLLRLYKASPDLVPMGEWTA 190
AL ++ + ++ A DI ++ + +++ A L + +++ P+ +
Sbjct: 131 ALTGLSCFVTPDLARDLANDIMTLM--SHTKPYIRKKAVLIMYKVFLKYPE--SLRPAFP 186
Query: 191 RVVHLLNDQHMGVVTAAVSLITCLCKKNPDDFKTCVSLAVSRLSRIVSSASTDLQDYTYY 250
R+ L D GV +AAV++I L ++NP K +SLA + SS +
Sbjct: 187 RLKEKLEDPDPGVQSAAVNVICELARRNP---KNYLSLAPLFFKLMTSSTNN-------- 235
Query: 251 FVPAPWLSVKLLRLLQCYPPPEDAAVKGRLVECLETVLNKAQEPPKSKKVQHSNAKNAIL 310
W+ +K+++L P E K +L+E L ++ HS + ++L
Sbjct: 236 -----WVLIKIIKLFGALTPLEPRLGK-KLIEPLTNLI-------------HSTSAMSLL 276
Query: 311 FETISLIIHY-----DSEPN--LLVRACNQ-LGQFLQHRETNLRYLALESMCTLASSEFS 362
+E ++ +I PN ++ C Q L ++ + NL+YL L +M + +
Sbjct: 277 YECVNTVIAVLISLSSGMPNHSASIQLCVQKLRILIEDSDQNLKYLGLLAMSKILKTH-- 334
Query: 363 HEAVKTHIDTVINALKTERDVSVRQRAADLLYAMCDRSNAKQIVSEMLRYLETAD-YAIR 421
++V++H D ++ L ++D S+R RA DLLY M + N +IV +++ +++ A+ R
Sbjct: 335 PKSVQSHKDLILQCL-DDKDESIRLRALDLLYGMVSKKNLMEIVKKLMTHVDKAEGTTYR 393
Query: 422 EEIVLKVAILAE----KYAVDYSWYVDTILNLIRIAGDYVSEEVWYRVLQIVTNRDDVQG 477
+E++ K+ + +Y ++ WY+ ++ L R+ G + ++L + ++
Sbjct: 394 DELLTKIIDICSQSNYQYITNFEWYISILVELTRLEGTRHGHLIAAQMLDVAIRVKAIRK 453
Query: 478 YAAKTVFEALQA 489
+A + L +
Sbjct: 454 FAVSQMSALLDS 465
>gi|22027651 adaptor-related protein complex 1 beta 1 subunit
isoform a [Homo sapiens]
Length = 949
Score = 96.3 bits (238), Expect = 1e-19
Identities = 147/698 (21%), Positives = 280/698 (40%), Gaps = 75/698 (10%)
Query: 36 ELANIRSKFKGDKALDGYSKKKYVCKLLFIFLLGHDIDFGHMEAVNLLSSNKYTEKQIGY 95
E+ ++++ DK KK+ V K++ +G D+ + VN + ++ K++ Y
Sbjct: 14 EIFELKAELNSDKK---EKKKEAVKKVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVY 70
Query: 96 LFISVLVNSNSELIRLINNAIKNDLASRNPTFMCLALHCIANVGSREMGEAFAADIPRIL 155
L++ S ++ + N D NP LA+ + + ++ E + + L
Sbjct: 71 LYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCL 130
Query: 156 VAGDSMDSVKQSAALCLLRLYKASPDLVPMGEWTARVVHLLNDQHMGVVTAAVSLITCLC 215
D V+++AA+C+ +L+ + LV + + L++D + VV AV+ ++ +
Sbjct: 131 --KDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDLISDSNPMVVANAVAALSEIA 188
Query: 216 KKNPDDFKTCVSLAVSRLSRIVSSASTDLQDYTYYFVPAPWLSVKLLRLLQCYPPPEDAA 275
+ +P + L +++++ T L + T W + +L L Y P +D
Sbjct: 189 ESHPS--SNLLDLNPQSINKLL----TALNECT------EWGQIFILDCLANYMPKDD-- 234
Query: 276 VKGRLVECLETVLNKAQEPPKSKKVQHSNAKNAILFETISLIIHY--------DSEPNLL 327
+AQ + + S+A +A++ + +++ + D LL
Sbjct: 235 -------------REAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYGTLL 281
Query: 328 VRACNQLGQFLQHRETNLRYLALESMCTLASSEFSHEAVKTHIDTVINALKTERDVSVRQ 387
+ L L E L+Y+AL ++ + E +K + +K + V+
Sbjct: 282 KKLAPPLVTLLS-AEPELQYVALRNINLIVQKR--PEILKHEMKVFF--VKYNDPIYVKL 336
Query: 388 RAADLLYAMCDRSNAKQIVSEMLRYLETADYAIREEIVLKVAILAEKYAVDYSWYVDTIL 447
D++ + ++N Q+++E+ Y D + V + A K V T+L
Sbjct: 337 EKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLL 396
Query: 448 NLIRIAGDYVSEEVWYRVLQIVTNRDDVQGYAAKTVFEALQAPACHENMVKVGG------ 501
+LI+ +YV +E IV +D + Y K +E++ A C EN+ +
Sbjct: 397 DLIQTKVNYVVQEA------IVVIKDIFRKYPNK--YESVIATLC-ENLDSLDEPEARAA 447
Query: 502 --YILGEFGNLIAGDPRSSPPVQFSLLHSKFHLCSVATRALLLSTYIK-FINLFPETKAT 558
+I+GE+ I ++ + S L FH S + LL+ +K F+ ET+
Sbjct: 448 MIWIVGEYAERI----DNADELLESFLEG-FHDESTQVQLQLLTAIVKLFLKKPTETQEL 502
Query: 559 IQGVLRAGSQLRNADVELQQRAVEYLTLSSVASTDVLATVLEEMPPFPERESSILAKLKR 618
+Q VL +Q + + +L+ R Y L S VL E P E I L
Sbjct: 503 VQQVLSLATQ-DSDNPDLRDRGYIYWRLLSTDPVAAKEVVLAEKPLISEETDLIEPTLLD 561
Query: 619 KKGPGAGSALDDGRRDPSSNDINGG-----MEPTPSTVSTPSPSADLLGLRAAPPPAAPP 673
+ G+ + PS+ + GG P T S+ S + APP P
Sbjct: 562 ELICYIGTLASVYHKPPSA-FVEGGRGVVHKSLPPRTASSESAESPETAPTGAPPGEQPD 620
Query: 674 ASAGAGNLLVDVFDGPAAQPSLGPTPEEAFLSPGPEDI 711
G+LL D+ + P GP + + G D+
Sbjct: 621 VIPAQGDLLGDLLNLDLGPPVSGPPLATSSVQMGAVDL 658
>gi|22027653 adaptor-related protein complex 1 beta 1 subunit
isoform b [Homo sapiens]
Length = 942
Score = 96.3 bits (238), Expect = 1e-19
Identities = 147/698 (21%), Positives = 280/698 (40%), Gaps = 75/698 (10%)
Query: 36 ELANIRSKFKGDKALDGYSKKKYVCKLLFIFLLGHDIDFGHMEAVNLLSSNKYTEKQIGY 95
E+ ++++ DK KK+ V K++ +G D+ + VN + ++ K++ Y
Sbjct: 14 EIFELKAELNSDKK---EKKKEAVKKVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVY 70
Query: 96 LFISVLVNSNSELIRLINNAIKNDLASRNPTFMCLALHCIANVGSREMGEAFAADIPRIL 155
L++ S ++ + N D NP LA+ + + ++ E + + L
Sbjct: 71 LYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCL 130
Query: 156 VAGDSMDSVKQSAALCLLRLYKASPDLVPMGEWTARVVHLLNDQHMGVVTAAVSLITCLC 215
D V+++AA+C+ +L+ + LV + + L++D + VV AV+ ++ +
Sbjct: 131 --KDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDLISDSNPMVVANAVAALSEIA 188
Query: 216 KKNPDDFKTCVSLAVSRLSRIVSSASTDLQDYTYYFVPAPWLSVKLLRLLQCYPPPEDAA 275
+ +P + L +++++ T L + T W + +L L Y P +D
Sbjct: 189 ESHPS--SNLLDLNPQSINKLL----TALNECT------EWGQIFILDCLANYMPKDD-- 234
Query: 276 VKGRLVECLETVLNKAQEPPKSKKVQHSNAKNAILFETISLIIHY--------DSEPNLL 327
+AQ + + S+A +A++ + +++ + D LL
Sbjct: 235 -------------REAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYGTLL 281
Query: 328 VRACNQLGQFLQHRETNLRYLALESMCTLASSEFSHEAVKTHIDTVINALKTERDVSVRQ 387
+ L L E L+Y+AL ++ + E +K + +K + V+
Sbjct: 282 KKLAPPLVTLLS-AEPELQYVALRNINLIVQKR--PEILKHEMKVFF--VKYNDPIYVKL 336
Query: 388 RAADLLYAMCDRSNAKQIVSEMLRYLETADYAIREEIVLKVAILAEKYAVDYSWYVDTIL 447
D++ + ++N Q+++E+ Y D + V + A K V T+L
Sbjct: 337 EKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLL 396
Query: 448 NLIRIAGDYVSEEVWYRVLQIVTNRDDVQGYAAKTVFEALQAPACHENMVKVGG------ 501
+LI+ +YV +E IV +D + Y K +E++ A C EN+ +
Sbjct: 397 DLIQTKVNYVVQEA------IVVIKDIFRKYPNK--YESVIATLC-ENLDSLDEPEARAA 447
Query: 502 --YILGEFGNLIAGDPRSSPPVQFSLLHSKFHLCSVATRALLLSTYIK-FINLFPETKAT 558
+I+GE+ I ++ + S L FH S + LL+ +K F+ ET+
Sbjct: 448 MIWIVGEYAERI----DNADELLESFLEG-FHDESTQVQLQLLTAIVKLFLKKPTETQEL 502
Query: 559 IQGVLRAGSQLRNADVELQQRAVEYLTLSSVASTDVLATVLEEMPPFPERESSILAKLKR 618
+Q VL +Q + + +L+ R Y L S VL E P E I L
Sbjct: 503 VQQVLSLATQ-DSDNPDLRDRGYIYWRLLSTDPVAAKEVVLAEKPLISEETDLIEPTLLD 561
Query: 619 KKGPGAGSALDDGRRDPSSNDINGG-----MEPTPSTVSTPSPSADLLGLRAAPPPAAPP 673
+ G+ + PS+ + GG P T S+ S + APP P
Sbjct: 562 ELICYIGTLASVYHKPPSA-FVEGGRGVVHKSLPPRTASSESAESPETAPTGAPPGEQPD 620
Query: 674 ASAGAGNLLVDVFDGPAAQPSLGPTPEEAFLSPGPEDI 711
G+LL D+ + P GP + + G D+
Sbjct: 621 VIPAQGDLLGDLLNLDLGPPVSGPPLATSSVQMGAVDL 658
>gi|4557469 adaptor-related protein complex 2, beta 1 subunit
isoform b [Homo sapiens]
Length = 937
Score = 94.0 bits (232), Expect = 6e-19
Identities = 201/994 (20%), Positives = 389/994 (39%), Gaps = 141/994 (14%)
Query: 25 SKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVCKLLFIFLLGHDIDFGHMEAVNLLS 84
+K+ EI + EL N + + +K+ V K++ +G D+ + VN +
Sbjct: 10 NKKGEIFELKAELNNEKKE----------KRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQ 59
Query: 85 SNKYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTFMCLALHCIANVGSREMG 144
++ K++ YL++ S ++ + N+ D NP LA+ + + ++
Sbjct: 60 TDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKIT 119
Query: 145 EAFAADIPRILVAGDSMDSVKQSAALCLLRLYKASPDLVPMGEWTARVVHLLNDQHMGVV 204
E + + L D V+++AA+C+ +L+ + +V + + L+ D + VV
Sbjct: 120 EYLCEPLRKCL--KDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVV 177
Query: 205 TAAVSLITCLCKKNPDDFKTCVSLAVSRLSRIVSSASTDLQDYTYYFVPAPWLSVKLLRL 264
AV+ ++ + + +P+ + L +++++ T L + T W + +L
Sbjct: 178 ANAVAALSEISESHPN--SNLLDLNPQNINKLL----TALNECT------EWGQIFILDC 225
Query: 265 LQCYPPPEDAAVKGRLVECLETVLNKAQEPPKSKKVQHSNAKNAILFETISLIIHY---- 320
L Y P +D +AQ + + S+A +A++ + +++ +
Sbjct: 226 LSNYNPKDD---------------REAQSICERVTPRLSHANSAVVLSAVKVLMKFLELL 270
Query: 321 --DSE-PNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSEFSHEAVKTHIDTVINAL 377
DS+ N+L++ L E ++Y+AL ++ + E +K I +
Sbjct: 271 PKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKR--PEILKQEIKVFF--V 326
Query: 378 KTERDVSVRQRAADLLYAMCDRSNAKQIVSEMLRYLETADYAIREEIVLKVAILAEKYAV 437
K + V+ D++ + ++N Q+++E+ Y D + V + A K
Sbjct: 327 KYNDPIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQ 386
Query: 438 DYSWYVDTILNLIRIAGDYVSEEVWYRVLQIVTNRDDVQGYAAKTVFEALQAPACHENMV 497
V T+L+LI+ +YV +E IV RD + Y K +E++ A C EN+
Sbjct: 387 SAERCVSTLLDLIQTKVNYVVQEA------IVVIRDIFRKYPNK--YESIIATLC-ENLD 437
Query: 498 KVGG--------YILGEFGNLIAGDPRSSPPVQFSLLHSKFHLCSVATRALLLSTYIK-F 548
+ +I+GE+ I ++ + S L FH S + LL+ +K F
Sbjct: 438 SLDEPDARAAMIWIVGEYAERI----DNADELLESFLEG-FHDESTQVQLTLLTAIVKLF 492
Query: 549 INLFPETKATIQGVLRAGSQLRNADVELQQRAVEYLTLSSVASTDVLATVLEEMPPFPER 608
+ ET+ +Q VL +Q + + +L+ R Y L S VL E P E
Sbjct: 493 LKKPSETQELVQQVLSLATQ-DSDNPDLRDRGYIYWRLLSTDPVTAKEVVLSEKPLISEE 551
Query: 609 ESSILAKLKRKKGPGAGSALDDGRRDPSS-----------------NDINGGMEPTPSTV 651
I L + GS + P++ + G P +T
Sbjct: 552 TDLIEPTLLDELICHIGSLASVYHKPPNAFVEGSHGIHRKHLPIHHGSTDAGDSPVGTTT 611
Query: 652 ST--------PSPS---ADLLGLRAAPPPAAPPASA---GAGNLLVDVFDG-------PA 690
+T PS DLL L PP P S+ GA +LL D P+
Sbjct: 612 ATNLEQPQVIPSQGDLLGDLLNLDLGPPVNVPQVSSMQMGAVDLLGGGLDSLVGQSFIPS 671
Query: 691 AQP-SLGPTPEEAFLSPGPEDIGPPIPEADELLNKFVCKNNGVLFENQLLQIGVKSEFRQ 749
+ P + P+P A +S G D+ +V L + + + F
Sbjct: 672 SVPATFAPSPTPAVVSSGLNDLFELSTGIGMAPGGYVAPKAVWLPAVKAKGLEISGTFTH 731
Query: 750 NLGRMY--LFYGNKT-------SVQFQNFSPTVVHPGDLQTQLAVQTKRVAAQ-VDGGAQ 799
G +Y + + NK ++QF S V+ T LA+ T + Q +D
Sbjct: 732 RQGHIYMEMNFTNKALQHMTDFAIQFNKNSFGVIP----STPLAIHTPLMPNQSIDVSLP 787
Query: 800 VQ---QVLNIECLRDFLTPPLLSVRFRYGGAPQALTLKLPVTINKFFQPTEMAAQDFFQR 856
+ V+ +E L + ++ Y + +P+ + F + +M Q F
Sbjct: 788 LNTLGPVMKMEPLNNLQVAVKNNIDVFY------FSCLIPLNV-LFVEDGKMERQVFLAT 840
Query: 857 WKQLSLPQQEAQKIFKANHPMDAEVTKAKLLGFGSALLDNVDPNPENFVGAGIIQTKALQ 916
WK + + E Q K H ++A+ +KL + + ++ + + T +
Sbjct: 841 WKDIP-NENELQFQIKECH-LNADTVSSKLQNNNVYTIAKRNVEGQDMLYQSLKLTNGIW 898
Query: 917 VGCLLRLEPNAQAQMYRLTLRTSKEPVSRHLCEL 950
+ LR++P Y L+L+ VS+++ ++
Sbjct: 899 ILAELRIQPG--NPNYTLSLKCRAPEVSQYIYQV 930
>gi|71773106 adaptor-related protein complex 2, beta 1 subunit
isoform a [Homo sapiens]
Length = 951
Score = 90.9 bits (224), Expect = 5e-18
Identities = 203/1008 (20%), Positives = 392/1008 (38%), Gaps = 155/1008 (15%)
Query: 25 SKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVCKLLFIFLLGHDIDFGHMEAVNLLS 84
+K+ EI + EL N + + +K+ V K++ +G D+ + VN +
Sbjct: 10 NKKGEIFELKAELNNEKKE----------KRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQ 59
Query: 85 SNKYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTFMCLALHCIANVGSREMG 144
++ K++ YL++ S ++ + N+ D NP LA+ + + ++
Sbjct: 60 TDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKIT 119
Query: 145 EAFAADIPRILVAGDSMDSVKQSAALCLLRLYKASPDLVPMGEWTARVVHLLNDQHMGVV 204
E + + L D V+++AA+C+ +L+ + +V + + L+ D + VV
Sbjct: 120 EYLCEPLRKCL--KDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVV 177
Query: 205 TAAVSLITCLCKKNPDDFKTCVSLAVSRLSRIVSSASTDLQDYTYYFVPAPWLSVKLLRL 264
AV+ ++ + + +P+ + L +++++ T L + T W + +L
Sbjct: 178 ANAVAALSEISESHPN--SNLLDLNPQNINKLL----TALNECT------EWGQIFILDC 225
Query: 265 LQCYPPPEDAAVKGRLVECLETVLNKAQEPPKSKKVQHSNAKNAILFETISLIIHY---- 320
L Y P +D +AQ + + S+A +A++ + +++ +
Sbjct: 226 LSNYNPKDD---------------REAQSICERVTPRLSHANSAVVLSAVKVLMKFLELL 270
Query: 321 --DSE-PNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSEFSHEAVKTHIDTVINAL 377
DS+ N+L++ L E ++Y+AL ++ + E +K I +
Sbjct: 271 PKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKR--PEILKQEIKVFF--V 326
Query: 378 KTERDVSVRQRAADLLYAMCDRSNAKQIVSEMLRYLETADYAIREEIVLKVAILAEKYAV 437
K + V+ D++ + ++N Q+++E+ Y D + V + A K
Sbjct: 327 KYNDPIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQ 386
Query: 438 DYSWYVDTILNLIRIAGDYVSEEVWYRVLQIVTNRDDVQGYAAKTVFEALQAPACHENMV 497
V T+L+LI+ +YV +E IV RD + Y K +E++ A C EN+
Sbjct: 387 SAERCVSTLLDLIQTKVNYVVQEA------IVVIRDIFRKYPNK--YESIIATLC-ENLD 437
Query: 498 KVGG--------YILGEFGNLIAGDPRSSPPVQFSLLHSKFHLCSVATRALLLSTYIK-F 548
+ +I+GE+ I ++ + S L FH S + LL+ +K F
Sbjct: 438 SLDEPDARAAMIWIVGEYAERI----DNADELLESFLEG-FHDESTQVQLTLLTAIVKLF 492
Query: 549 INLFPETKATIQGVLRAGSQLRNADVELQQRAVEYLTLSSVASTDVLATVLEEMPPFPER 608
+ ET+ +Q VL +Q + + +L+ R Y L S VL E P E
Sbjct: 493 LKKPSETQELVQQVLSLATQ-DSDNPDLRDRGYIYWRLLSTDPVTAKEVVLSEKPLISEE 551
Query: 609 ESSILAKLKRKKGPGAGSALDDGRRDPSS-----------------NDINGGMEPTPSTV 651
I L + GS + P++ + G P +T
Sbjct: 552 TDLIEPTLLDELICHIGSLASVYHKPPNAFVEGSHGIHRKHLPIHHGSTDAGDSPVGTTT 611
Query: 652 ST--------PSPS---ADLLGLRAAPPPAAPPASA---GAGNLL---------VDVFDG 688
+T PS DLL L PP P S+ GA +LL D+ G
Sbjct: 612 ATNLEQPQVIPSQGDLLGDLLNLDLGPPVNVPQVSSMQMGAVDLLGGGLDSLLGSDLGGG 671
Query: 689 PAAQPSLGPT------PEEAFLSPGPEDIGPPIPEADELLNKFVCKNNGVLFENQLLQIG 742
P++G + P SP P + + + EL G + +
Sbjct: 672 IGGSPAVGQSFIPSSVPATFAPSPTPAVVSSGLNDLFELSTGIGMAPGGYVAPKAVWLPA 731
Query: 743 VKSE-------FRQNLGRMY--LFYGNKT-------SVQFQNFSPTVVHPGDLQTQLAVQ 786
VK++ F G +Y + + NK ++QF S V+ T LA+
Sbjct: 732 VKAKGLEISGTFTHRQGHIYMEMNFTNKALQHMTDFAIQFNKNSFGVIP----STPLAIH 787
Query: 787 TKRVAAQ-VDGGAQVQ---QVLNIECLRDFLTPPLLSVRFRYGGAPQALTLKLPVTINKF 842
T + Q +D + V+ +E L + ++ Y + +P+ + F
Sbjct: 788 TPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAVKNNIDVFY------FSCLIPLNV-LF 840
Query: 843 FQPTEMAAQDFFQRWKQLSLPQQEAQKIFKANHPMDAEVTKAKLLGFGSALLDNVDPNPE 902
+ +M Q F WK + + E Q K H ++A+ +KL + + +
Sbjct: 841 VEDGKMERQVFLATWKDIP-NENELQFQIKECH-LNADTVSSKLQNNNVYTIAKRNVEGQ 898
Query: 903 NFVGAGIIQTKALQVGCLLRLEPNAQAQMYRLTLRTSKEPVSRHLCEL 950
+ + + T + + LR++P Y L+L+ VS+++ ++
Sbjct: 899 DMLYQSLKLTNGIWILAELRIQPG--NPNYTLSLKCRAPEVSQYIYQV 944
>gi|117553584 adaptor-related protein complex 3, delta 1 subunit
isoform 1 [Homo sapiens]
Length = 1112
Score = 67.8 bits (164), Expect = 5e-11
Identities = 46/201 (22%), Positives = 101/201 (50%), Gaps = 16/201 (7%)
Query: 302 HSNAKNAILFETISLIIHY-----DSEPN--LLVRACNQ-LGQFLQHRETNLRYLALESM 353
HS + ++L+E ++ +I PN ++ C Q L ++ + NL+YL L +M
Sbjct: 177 HSTSAMSLLYECVNTVIAVLISLSSGMPNHSASIQLCVQKLRILIEDSDQNLKYLGLLAM 236
Query: 354 CTLASSEFSHEAVKTHIDTVINALKTERDVSVRQRAADLLYAMCDRSNAKQIVSEMLRYL 413
+ + ++V++H D ++ L ++D S+R RA DLLY M + N +IV +++ ++
Sbjct: 237 SKILKTH--PKSVQSHKDLILQCLD-DKDESIRLRALDLLYGMVSKKNLMEIVKKLMTHV 293
Query: 414 ETAD-YAIREEIVLKVAILAE----KYAVDYSWYVDTILNLIRIAGDYVSEEVWYRVLQI 468
+ A+ R+E++ K+ + +Y ++ WY+ ++ L R+ G + ++L +
Sbjct: 294 DKAEGTTYRDELLTKIIDICSQSNYQYITNFEWYISILVELTRLEGTRHGHLIAAQMLDV 353
Query: 469 VTNRDDVQGYAAKTVFEALQA 489
++ +A + L +
Sbjct: 354 AIRVKAIRKFAVSQMSALLDS 374
Score = 64.7 bits (156), Expect = 4e-10
Identities = 58/242 (23%), Positives = 114/242 (47%), Gaps = 12/242 (4%)
Query: 11 RGLAVFISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVCKLLFIFLLGH 70
+ L + IRN KE E K I++ + I+ + K D K VCKL ++ +LG+
Sbjct: 16 KNLQDLVRGIRN--HKEDEAKYISQCIDEIKQELKQDNIA---VKANAVCKLTYLQMLGY 70
Query: 71 DIDFGHMEAVNLLSSNKYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTFMCL 130
DI + + ++S++K+T K+IGYL S + +++I L N I+ DL+S + +
Sbjct: 71 DISWAAFNIIEVMSASKFTFKRIGYLAASQSFHEGTDVIMLTTNQIRKDLSSPSQYDTGV 130
Query: 131 ALHCIANVGSREMGEAFAADIPRILVAGDSMDSVKQSAALC--LLRLYKASPDLVPMGEW 188
AL ++ + ++ A DI ++ + +++ A L L L ++ + + E
Sbjct: 131 ALTGLSCFVTPDLARDLANDIMTLM--SHTKPYIRKKAKLIEPLTNLIHSTSAMSLLYEC 188
Query: 189 TARVVHLLNDQHMGVVTAAVSLITCLCKKN---PDDFKTCVSLAVSRLSRIVSSASTDLQ 245
V+ +L G+ + S+ C+ K D + L + +S+I+ + +Q
Sbjct: 189 VNTVIAVLISLSSGMPNHSASIQLCVQKLRILIEDSDQNLKYLGLLAMSKILKTHPKSVQ 248
Query: 246 DY 247
+
Sbjct: 249 SH 250
>gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo
sapiens]
Length = 594
Score = 44.7 bits (104), Expect = 4e-04
Identities = 43/114 (37%), Positives = 48/114 (42%), Gaps = 10/114 (8%)
Query: 608 RESSILAKLKRKKGPGAGSALDDGRRDPSSNDINGG--MEPTPSTVSTPS-PSADLLGLR 664
R S + R GPGAG GRR + + GG P PS V P P+ D
Sbjct: 449 RTGSQVGSRGRGWGPGAGRVPSGGRRGVGNPERWGGEAAAPRPSRVLLPELPAVD----P 504
Query: 665 AAPPPAAPPASAGAGNLLVDVFDGPAAQPSL--GPTPEEAFLSPGPEDIGPPIP 716
A P A+A L V GP A PS GP P LSPG E GPP P
Sbjct: 505 ARDTRREPDAAAQRTELGGRVGKGPGAPPSALPGPRPRPDSLSPG-EPPGPPTP 557
>gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo
sapiens]
Length = 594
Score = 44.7 bits (104), Expect = 4e-04
Identities = 43/114 (37%), Positives = 48/114 (42%), Gaps = 10/114 (8%)
Query: 608 RESSILAKLKRKKGPGAGSALDDGRRDPSSNDINGG--MEPTPSTVSTPS-PSADLLGLR 664
R S + R GPGAG GRR + + GG P PS V P P+ D
Sbjct: 449 RTGSQVGSRGRGWGPGAGRVPSGGRRGVGNPERWGGEAAAPRPSRVLLPELPAVD----P 504
Query: 665 AAPPPAAPPASAGAGNLLVDVFDGPAAQPSL--GPTPEEAFLSPGPEDIGPPIP 716
A P A+A L V GP A PS GP P LSPG E GPP P
Sbjct: 505 ARDTRREPDAAAQRTELGGRVGKGPGAPPSALPGPRPRPDSLSPG-EPPGPPTP 557
>gi|122891864 zinc finger protein, subfamily 1A, 4 [Homo sapiens]
Length = 585
Score = 41.6 bits (96), Expect = 0.004
Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 23/160 (14%)
Query: 592 TDVLATVLEEMPPFPERESSILAKLKRKKGPGAGSALDDGR---------RDPSSNDING 642
T V+++V +M P P R + R+ G G D G DP ++ NG
Sbjct: 396 TPVISSVYTQMQPLPGR---LELPGSREAGEGPEDLADGGPLLYRPRGPLTDPGASPSNG 452
Query: 643 GMEPTPSTVSTPSPSADLLGLRAAPPPAAPPASAGAGNLLVDVFDGPAAQPSLGPTPEEA 702
+ T + + A ++ L PPP PP + V A P P+E
Sbjct: 453 CQDSTDTESNHEDRVAGVVSLPQGPPPQPPPT--------IVVGRHSPAYAKEDPKPQEG 504
Query: 703 FL--SPGP-EDIGPPIPEADELLNKFVCKNNGVLFENQLL 739
L +PGP +++ + E+ E + F C++ +LF + ++
Sbjct: 505 LLRGTPGPSKEVLRVVGESGEPVKAFKCEHCRILFLDHVM 544
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 40.8 bits (94), Expect = 0.006
Identities = 45/148 (30%), Positives = 57/148 (38%), Gaps = 29/148 (19%)
Query: 582 EYLTLSSVASTDVLATVLEEMPPFPERESSILAKLKRKKGPGAGSALDDGRRDPSSNDIN 641
E L LS L+ EE P P ESS + L+ S L P S +
Sbjct: 481 EALHLSRPLEESPLSPPPEESPLSPPPESSPFSPLEE-------SPLSPPEESPPSPALE 533
Query: 642 GGMEPTP--STVSTPSPSADLLGLRAAPPPAAPPASAGAGNLLVDVFDGPAAQPSLGPTP 699
+ P P S +S P + L +PPP P S P L P P
Sbjct: 534 TPLSPPPEASPLSPPFEESPL-----SPPPEELPTSP------------PPEASRLSPPP 576
Query: 700 EEAFLSPGPED--IGPPIPEADELLNKF 725
EE+ +SP PE+ + PP PEA L F
Sbjct: 577 EESPMSPPPEESPMSPP-PEASRLFPPF 603
Score = 35.4 bits (80), Expect = 0.26
Identities = 35/122 (28%), Positives = 49/122 (40%), Gaps = 9/122 (7%)
Query: 603 PPFPERESSILAKLKRKKGPGAGSALDDGRRDPSSNDINGGMEPTPSTVSTPSPSADLLG 662
P P S L+ + + G + L + + S +EP+ +T PSP DL
Sbjct: 1045 PALPLSVPSPLSPIGKVVGVSDEAELHEMETEKVSEPECPALEPS-ATSPLPSPMGDLSC 1103
Query: 663 LRAAPPPAAPPASA-GAGNLLVDVFDGPAAQPSLGPTP----EEAFLSP---GPEDIGPP 714
+P PA S G +D D P +QP G TP E SP PE++ P
Sbjct: 1104 PAPSPAPALDDFSGLGEDTAPLDGIDAPGSQPEPGQTPGSLASELKGSPVLLDPEELAPV 1163
Query: 715 IP 716
P
Sbjct: 1164 TP 1165
Score = 34.7 bits (78), Expect = 0.44
Identities = 48/166 (28%), Positives = 70/166 (42%), Gaps = 22/166 (13%)
Query: 564 RAGSQLRNADVELQQRAVEYLTLSSVASTDVLATVLEEMPPFPERESSILA----KLKRK 619
+AG QL + +L+ E + L L+ EE P P E+S L+ +L
Sbjct: 421 KAGVQL---EPQLEAPLNEEMPLLPPPEESPLSPPPEESPTSPPPEASRLSPPPEELPAS 477
Query: 620 KGPGA---GSALDDGRRDPSSNDINGGMEPTPSTVSTPSPSADLLGLRAAPPPAAPPASA 676
P A L++ P + + P P + SP + L +PP +PP+ A
Sbjct: 478 PLPEALHLSRPLEESPLSPPPEE--SPLSPPPES----SPFSPLEESPLSPPEESPPSPA 531
Query: 677 GAGNLLVDVFDGPAAQPSLGPTPEEAFLSPGPEDI-GPPIPEADEL 721
L + P A P L P EE+ LSP PE++ P PEA L
Sbjct: 532 ----LETPLSPPPEASP-LSPPFEESPLSPPPEELPTSPPPEASRL 572
Score = 33.5 bits (75), Expect = 0.97
Identities = 59/222 (26%), Positives = 84/222 (37%), Gaps = 58/222 (26%)
Query: 554 ETKATIQGVLRAGSQLRNADVELQQRAVEYLTLSSVASTDVLATVLEEMPPF--PERESS 611
+ +A +QGVL QLR+ + QQ+ L + + + + PP+ P ++S
Sbjct: 4196 QLRAQLQGVLAKNPQLRHLSPQQQQQLQALLMQRQLQQSQ----AVRQTPPYQEPGTQTS 4251
Query: 612 ILAKL-----------KRKKGP----GAGSALDDGRRDP------SSNDINGGMEPTPST 650
L L + GP GAG R P S+ + G + PTP
Sbjct: 4252 PLQGLLGCQPQLGGFPGPQTGPLQELGAGPRPQGPPRLPAPPGALSTGPVLGPVHPTPPP 4311
Query: 651 VS---------TPSPSADL----------------LGLRAAPPPA-APPASAGAGNLLVD 684
S PSPS+ L G PPP PA+A + L
Sbjct: 4312 SSPQEPKRPSQLPSPSSQLPTEAQLPPTHPGTPKPQGPTLEPPPGRVSPAAAQLADTLFS 4371
Query: 685 VFDGPAAQP-SLGPT--PEEAFLSPGPED--IGPPIPEADEL 721
GP P +L T PE++ L PG D G +PEA +L
Sbjct: 4372 KGLGPWDPPDNLAETQKPEQSSLVPGHLDQVNGQVVPEASQL 4413
Score = 32.7 bits (73), Expect = 1.7
Identities = 35/125 (28%), Positives = 43/125 (34%), Gaps = 12/125 (9%)
Query: 603 PPFPERESSILAKLKRKKGPGAGSALDDGRRDPSSNDINGGMEPTPSTVSTPSPSADLLG 662
PPF E S + P S L P D P S +S P + L
Sbjct: 601 PPFEESPLSPPPEESPLSPPPEASRLS-----PPPEDSPMSPPPEESPMSPPPEVSRLSP 655
Query: 663 L----RAAPPPAAPPASAGAGNLLVDVFDGPAAQPSLGPTPEEAFLSPGPEDIGPPIPEA 718
L R +PPP P S P L P PE++ SP PED P
Sbjct: 656 LPVVSRLSPPPEESPLSPPPEE---SPTSPPPEASRLSPPPEDSPTSPPPEDSPASPPPE 712
Query: 719 DELLN 723
D L++
Sbjct: 713 DSLMS 717
Score = 32.3 bits (72), Expect = 2.2
Identities = 36/122 (29%), Positives = 45/122 (36%), Gaps = 31/122 (25%)
Query: 600 EEMPPFPERESSILAKLKRKKGPGAGSALDDGRRDPSSNDINGGMEPTPSTVSTPSPSAD 659
EE P P E+S L+ +D P D P S +S P +
Sbjct: 676 EESPTSPPPEASRLSPPP-----------EDSPTSPPPEDSPASPPPEDSLMSLPLEESP 724
Query: 660 LLGLRAAPPPAAPPASAGAGNLLVDVFDGPAAQPSLGPTPEEAFLSPGPEDIGPPI-PEA 718
LL L P P S G P L P PEE LSP PE+ P + P+A
Sbjct: 725 LLPLPEEPQLC--PRSEG---------------PHLSPRPEEPHLSPRPEE--PHLSPQA 765
Query: 719 DE 720
+E
Sbjct: 766 EE 767
>gi|116292168 KRAB A domain containing 1 [Homo sapiens]
Length = 1030
Score = 40.4 bits (93), Expect = 0.008
Identities = 43/168 (25%), Positives = 62/168 (36%), Gaps = 42/168 (25%)
Query: 583 YLTLSSVASTDVLATVLEEMPPFPERESSILAKLKRKKGPGAGSALDDGRRDPSSNDING 642
Y TL SV + ++L S+ L+ + + G GS D+G+ D G
Sbjct: 5 YETLVSVGTAELLPL------------SAFLSPSEPGRAVGGGSHADEGQEPAGCGDPQG 52
Query: 643 G-------------------------MEPTPSTVSTPSPSADLLGLRAAPPPAAPPASAG 677
G ++ + + S A L G RA+P AA
Sbjct: 53 GQPRHSLHLTALVQLVKEIPEFLFGEVKGAMDSPESESRGASLDGERASPEAAAAREPCP 112
Query: 678 AGNLLVDVFDGPAAQPSLGPTPEEAFLSPGPEDIGP-----PIPEADE 720
LL + DGP +QP L TP ++ S GP G PI AD+
Sbjct: 113 LRGLLSCLPDGPTSQPHLATTPTDSSCSSGPTGDGVQGSPLPIKTADK 160
>gi|114155127 regulator of G-protein signalling 3 isoform 6 [Homo
sapiens]
Length = 1198
Score = 39.3 bits (90), Expect = 0.018
Identities = 54/192 (28%), Positives = 70/192 (36%), Gaps = 35/192 (18%)
Query: 546 IKFINLFPETKATIQGVLRAGSQLRNADVELQQRAVEYLTLSSVASTDVLATVLEEMPPF 605
+KF L+ KA L A SQ Q++ V + ++A LA + F
Sbjct: 629 LKFCVLYLAEKAECLFTLEAHSQE-------QKKRVCWCLSENIAKQQQLAASPPDSKMF 681
Query: 606 P-ERESSILAKLKRKKGPGA-----------GSALDDGRRDPSSNDINGGMEPTPSTVST 653
E + L+ KGPGA G L G+ P + D G EP PS
Sbjct: 682 ETEADEKREMALEEGKGPGAEDSPPSKEPSPGQELPPGQDLPPNKDSPSGQEPAPS--QE 739
Query: 654 PSPSADLLGLRAAPP-PAAPPASAGAGNLLVDVFDGPAAQPSLGPTPEEAFLSPGPEDIG 712
P S D +PP P APP+ V P L P + L G E
Sbjct: 740 PLSSKDSATSEGSPPGPDAPPSKD------VPPCQEPPPAQDLSPCQD---LPAGQE--- 787
Query: 713 PPIPEADELLNK 724
P+P D LL K
Sbjct: 788 -PLPHQDPLLTK 798
>gi|62865651 regulator of G-protein signalling 3 isoform 1 [Homo
sapiens]
Length = 917
Score = 39.3 bits (90), Expect = 0.018
Identities = 54/192 (28%), Positives = 70/192 (36%), Gaps = 35/192 (18%)
Query: 546 IKFINLFPETKATIQGVLRAGSQLRNADVELQQRAVEYLTLSSVASTDVLATVLEEMPPF 605
+KF L+ KA L A SQ Q++ V + ++A LA + F
Sbjct: 348 LKFCVLYLAEKAECLFTLEAHSQE-------QKKRVCWCLSENIAKQQQLAASPPDSKMF 400
Query: 606 P-ERESSILAKLKRKKGPGA-----------GSALDDGRRDPSSNDINGGMEPTPSTVST 653
E + L+ KGPGA G L G+ P + D G EP PS
Sbjct: 401 ETEADEKREMALEEGKGPGAEDSPPSKEPSPGQELPPGQDLPPNKDSPSGQEPAPS--QE 458
Query: 654 PSPSADLLGLRAAPP-PAAPPASAGAGNLLVDVFDGPAAQPSLGPTPEEAFLSPGPEDIG 712
P S D +PP P APP+ V P L P + L G E
Sbjct: 459 PLSSKDSATSEGSPPGPDAPPSKD------VPPCQEPPPAQDLSPCQD---LPAGQE--- 506
Query: 713 PPIPEADELLNK 724
P+P D LL K
Sbjct: 507 -PLPHQDPLLTK 517
>gi|56118221 amyloid beta (A4) precursor protein-binding, family B,
member 1 interacting protein [Homo sapiens]
Length = 666
Score = 39.3 bits (90), Expect = 0.018
Identities = 41/126 (32%), Positives = 46/126 (36%), Gaps = 26/126 (20%)
Query: 603 PPFPERESSIL----AKLKRKKGPGAGSA----------------LDDGRRDPSSNDING 642
PP P R SS A + KG G G LDD P D
Sbjct: 518 PPPPVRRSSDTSGSPATPLKAKGTGGGGLPAPPDDFLPPPPPPPPLDDPELPPPPPDF-- 575
Query: 643 GMEPTPSTVSTPSPS-ADLLGLRAAPPPAAPPASAGAGNLLVDVFDGPAAQPSLGPTPEE 701
MEP P V P PS A + G PPP PPA A A + D P A P P +
Sbjct: 576 -MEPPPDFVPPPPPSYAGIAGSELPPPPPPPPAPAPAP--VPDSARPPPAVAKRPPVPPK 632
Query: 702 AFLSPG 707
+PG
Sbjct: 633 RQENPG 638
>gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens]
Length = 753
Score = 39.3 bits (90), Expect = 0.018
Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 22/136 (16%)
Query: 590 ASTDVLATVLEEMPPFPERESSILAKLKRKKGPGAGSALDDGRRDPSSNDINGGMEP--- 646
+ST T +PP P ++ ++ +K+G S + S ++ P
Sbjct: 258 SSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQSPAKNGSKPVHSNQHPQSP 317
Query: 647 --TPSTVSTPSPSADLL----GLRAAPPPAAPPASAGAGNLLVDVFDGPAAQPSLGPTPE 700
P+ S P P+A L G P PAAPP++ GP A P+ P+
Sbjct: 318 AVPPTYPSGPPPAASALSTTPGNNGVPAPAAPPSAL-----------GPKASPA--PSHN 364
Query: 701 EAFLSPGPEDIGPPIP 716
+P + + PP P
Sbjct: 365 SGTPAPYAQAVAPPAP 380
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 38.9 bits (89), Expect = 0.023
Identities = 43/157 (27%), Positives = 60/157 (38%), Gaps = 20/157 (12%)
Query: 584 LTLSSVASTDVLATVLE----EMPPFPERESSILAKLK-----RKKGPGAGSALDDGRRD 634
L L S D+L V E + P P S+L +L+ + P + S+ R
Sbjct: 115 LDLRPGESEDMLELVAEVRIGDRDPIPLPVPSLLPRLRAWRTGKTVSPQSNSSRPTCARH 174
Query: 635 PSSNDINGGMEPTPSTVS-----TPSPSADLLGLRAAPPPAAPPASAGAGNLLVDVFDGP 689
+ +GG P P+ S +PSPS+ PPP APPA + D F
Sbjct: 175 LTLGTGDGGPAPPPAPSSASSSPSPSPSSSSPSPPPPPPPPAPPAPPAPRFDIYDPFHPT 234
Query: 690 AAQPSLGPTPEEAFLSPGP------EDIGPPIPEADE 720
S P PE+ + P G P PE +E
Sbjct: 235 DEAYSPPPAPEQKYDPFEPTGSNPSSSAGTPSPEEEE 271
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 38.9 bits (89), Expect = 0.023
Identities = 32/127 (25%), Positives = 44/127 (34%), Gaps = 16/127 (12%)
Query: 600 EEMPPFPERESSILAKLKRKKGPGAGSALDDGRRDPSSNDINGGMEPTPSTVSTPSPSAD 659
++ PP P+ S + PG GSA P + G P TP+P
Sbjct: 97 QQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPA 156
Query: 660 LLGLRAAPPPAAPPASAGAGNLLVDVFDGPAAQPSLG--PTPEEAFLSPGP---EDIGPP 714
+ PP PP+S P P G P P A PGP + GP
Sbjct: 157 VTSAPPGAPPPTPPSSG-----------VPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPG 205
Query: 715 IPEADEL 721
P+ ++
Sbjct: 206 GPKGGKM 212
>gi|22547195 sterol regulatory element binding transcription factor
1 isoform b [Homo sapiens]
Length = 1147
Score = 38.5 bits (88), Expect = 0.030
Identities = 42/158 (26%), Positives = 66/158 (41%), Gaps = 31/158 (19%)
Query: 572 ADVELQQRAVEYLTLSSVASTDVLATVLEEMPPFPERESSILAKLKRKKGPGAGSALDDG 631
++ L+Q E L + TD+ E+M + S L G+G+ G
Sbjct: 7 SEAALEQALGEPCDLDAALLTDI-----EDMLQLINNQDSDFPGLFDPPYAGSGA----G 57
Query: 632 RRDPSSNDIN--GGMEPTPSTVSTPSPSADLLGLRAAPPPAAPPA--------------- 674
DP+S D + G + P P+T+S+ S A L G +AAP P +PP
Sbjct: 58 GTDPASPDTSSPGSLSPPPATLSS-SLEAFLSGPQAAPSPLSPPQPAPTPLKMYPSMPAF 116
Query: 675 SAGAG----NLLVDVFDGPAAQPSLGPTPEEAFLSPGP 708
S G G ++ + + P QP G ++F +P P
Sbjct: 117 SPGPGIKEESVPLSILQTPTPQPLPGALLPQSFPAPAP 154
>gi|39812378 RAN binding protein 9 [Homo sapiens]
Length = 729
Score = 38.5 bits (88), Expect = 0.030
Identities = 28/84 (33%), Positives = 32/84 (38%), Gaps = 21/84 (25%)
Query: 646 PTPSTVSTPSPSADLLGLRAAPPPAAPPASAGAGNLLVDVFDGPAAQPSLGPTPEEAFLS 705
P P+T + P P PPP PPASA A GP A P L P A +
Sbjct: 75 PPPATAAPPPP----------PPPPPPPASAAA------PASGPPAPPGLAAGPGPAGGA 118
Query: 706 PGP-----EDIGPPIPEADELLNK 724
P P P P D LN+
Sbjct: 119 PTPALVAGSSAAAPFPHGDSALNE 142
>gi|52630419 sterol regulatory element binding transcription factor
1 isoform a [Homo sapiens]
Length = 1177
Score = 38.1 bits (87), Expect = 0.040
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 24/108 (22%)
Query: 622 PGAGSALDDGRRDPSSNDIN--GGMEPTPSTVSTPSPSADLLGLRAAPPPAAPPA----- 674
P AGS G DP+S D + G + P P+T+S+ S A L G +AAP P +PP
Sbjct: 80 PYAGSGA--GGTDPASPDTSSPGSLSPPPATLSS-SLEAFLSGPQAAPSPLSPPQPAPTP 136
Query: 675 ----------SAGAG----NLLVDVFDGPAAQPSLGPTPEEAFLSPGP 708
S G G ++ + + P QP G ++F +P P
Sbjct: 137 LKMYPSMPAFSPGPGIKEESVPLSILQTPTPQPLPGALLPQSFPAPAP 184
>gi|239754940 PREDICTED: hypothetical protein [Homo sapiens]
Length = 159
Score = 37.7 bits (86), Expect = 0.052
Identities = 37/127 (29%), Positives = 47/127 (37%), Gaps = 25/127 (19%)
Query: 620 KGPGAGSALDDGRRDPSSNDING---------GMEPTPSTVSTPSP-----SADLLGLRA 665
+G GAG + G +P + G G+ P P+ P+P +A L L A
Sbjct: 15 RGGGAGRRVRVGVGEPGGFCLPGPALVVAGLDGIRPAPAAAHPPAPRERPAAARLSALAA 74
Query: 666 APPPAAPPASAGAGNLLVDVFDGPAAQ----------PSLGPTPEEAFLSPGPEDIGPPI 715
A P P G G + PA Q PS GP P SP P PP+
Sbjct: 75 AQPRRRSPGPQGGGGGDIASPLPPALQPRGAPAVPAAPSPGPLPARP-SSPPPSPPSPPV 133
Query: 716 PEADELL 722
P A L
Sbjct: 134 PTAQSSL 140
Score = 30.4 bits (67), Expect = 8.2
Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 16/106 (15%)
Query: 604 PFPERESSILAKLKRKKGPGAGSALDDGRRDPSSNDINGGMEPTPSTVSTPSPSADLLGL 663
P R S++ A R++ PG G ++ + ++P + +PS L
Sbjct: 64 PAAARLSALAAAQPRRRSPGP----QGGGGGDIASPLPPALQPRGAPAVPAAPSPGPLPA 119
Query: 664 RAAPPPAAPPASAGAGNLLVDVFDGPAAQPSL-GPTPEEAFLSPGP 708
R + PP +PP+ P AQ SL P P + SP P
Sbjct: 120 RPSSPPPSPPSP-----------PVPTAQSSLPAPWPPQGPRSPAP 154
>gi|165905613 ring finger and KH domain containing 1 [Homo sapiens]
Length = 651
Score = 37.7 bits (86), Expect = 0.052
Identities = 35/128 (27%), Positives = 49/128 (38%), Gaps = 18/128 (14%)
Query: 603 PPFPERESSILA-KLKRKKGPGAGSALDD------GRRDPSSNDINGGMEPTPSTVSTPS 655
PP P+ ++ L L + G G A D G ++ +GG P P P
Sbjct: 49 PPEPDDAAAALRLALDQLSALGLGGAGDTDEEGAAGDGAAAAGGADGGAAPEPVPPDGPE 108
Query: 656 PSADLLGLRAAPPPAAPPASAGAGNLLVDVFDGPAAQPSLGPTPEEAF--LSPGPEDIGP 713
A PP PA A L+D P P P+P + F +P P +GP
Sbjct: 109 AGA---------PPTLAPAVAPGSLPLLDPNASPPPPPPPRPSPPDVFAGFAPHPAALGP 159
Query: 714 PIPEADEL 721
P AD++
Sbjct: 160 PTLLADQM 167
>gi|42544243 dynamin 3 isoform a [Homo sapiens]
Length = 863
Score = 37.4 bits (85), Expect = 0.067
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 11/72 (15%)
Query: 649 STVSTPSP----SADLLGLRAAPPPAAPPASAGAGNLLVDVFDGPAAQPSLGPTPEEAFL 704
+TVSTP+P + + R +PPP+ P + L P A+P+ G P A
Sbjct: 742 ATVSTPAPPPVDDSWIQHSRRSPPPS--PTTQRRPTL-----SAPLARPTSGRGPAPAIP 794
Query: 705 SPGPEDIGPPIP 716
SPGP PP+P
Sbjct: 795 SPGPHSGAPPVP 806
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,192,920
Number of Sequences: 37866
Number of extensions: 1759335
Number of successful extensions: 8258
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 263
Number of HSP's that attempted gapping in prelim test: 7455
Number of HSP's gapped (non-prelim): 899
length of query: 955
length of database: 18,247,518
effective HSP length: 112
effective length of query: 843
effective length of database: 14,006,526
effective search space: 11807501418
effective search space used: 11807501418
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.