Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 197927203

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|197927203 ADP-ribosylation factor related protein 1 isoform
b [Homo sapiens]
         (173 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|197927203 ADP-ribosylation factor related protein 1 isoform b...   351   2e-97
gi|4507449 ADP-ribosylation factor related protein 1 isoform a [...   351   2e-97
gi|6912244 ADP-ribosylation factor-like 5A isoform 1 [Homo sapiens]   112   2e-25
gi|148612885 ADP-ribosylation factor-like 2 [Homo sapiens]            108   3e-24
gi|13376574 ADP-ribosylation factor-like 14 [Homo sapiens]            106   9e-24
gi|4757774 ADP-ribosylation factor-like 3 [Homo sapiens]              105   3e-23
gi|30520350 ADP-ribosylation factor-like 8 [Homo sapiens]             104   4e-23
gi|33598956 ADP-ribosylation factor-like 2-like 1 isoform 1 [Hom...   103   1e-22
gi|66879664 ADP-ribosylation factor 1 [Homo sapiens]                   99   2e-21
gi|66879662 ADP-ribosylation factor 1 [Homo sapiens]                   99   2e-21
gi|66879660 ADP-ribosylation factor 1 [Homo sapiens]                   99   2e-21
gi|4502201 ADP-ribosylation factor 1 [Homo sapiens]                    99   2e-21
gi|4502209 ADP-ribosylation factor 5 [Homo sapiens]                    97   9e-21
gi|4502203 ADP-ribosylation factor 3 [Homo sapiens]                    95   3e-20
gi|4502205 ADP-ribosylation factor 4 [Homo sapiens]                    95   3e-20
gi|81295813 ADP-ribosylation factor-like 4A [Homo sapiens]             94   4e-20
gi|47078227 ADP-ribosylation factor-like 4A [Homo sapiens]             94   4e-20
gi|5031603 ADP-ribosylation factor-like 4A [Homo sapiens]              94   4e-20
gi|4502211 ADP-ribosylation factor 6 [Homo sapiens]                    93   1e-19
gi|19923979 ADP-ribosylation factor-like 11 [Homo sapiens]             93   1e-19
gi|82546836 ADP-ribosylation factor-like 5A isoform 2 [Homo sapi...    92   3e-19
gi|82546838 ADP-ribosylation factor-like 5A isoform 2 [Homo sapi...    92   3e-19
gi|4502197 ADP-ribosylation factor domain protein 1 isoform alph...    91   5e-19
gi|20270343 ADP-ribosylation factor-like 8A [Homo sapiens]             91   6e-19
gi|221219071 ADP-ribosylation factor-like 5C [Homo sapiens]            90   8e-19
gi|8922601 ADP-ribosylation factor-like 10C [Homo sapiens]             90   8e-19
gi|4502227 ADP-ribosylation factor-like 1 [Homo sapiens]               89   1e-18
gi|15208643 ADP-ribosylation factor domain protein 1 isoform gam...    89   1e-18
gi|15208641 ADP-ribosylation factor domain protein 1 isoform bet...    89   1e-18
gi|6552296 ADP-ribosylation factor-like 4C [Homo sapiens]              88   3e-18

>gi|197927203 ADP-ribosylation factor related protein 1 isoform b
           [Homo sapiens]
          Length = 173

 Score =  351 bits (901), Expect = 2e-97
 Identities = 173/173 (100%), Positives = 173/173 (100%)

Query: 1   MYTLLSGLYKYMFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLN 60
           MYTLLSGLYKYMFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLN
Sbjct: 1   MYTLLSGLYKYMFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLN 60

Query: 61  IGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVT 120
           IGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVT
Sbjct: 61  IGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVT 120

Query: 121 SEALCGVPVLVLANKQDVETCLSIPDIKTAFSDCTSKIGRRDCLTQACSALTG 173
           SEALCGVPVLVLANKQDVETCLSIPDIKTAFSDCTSKIGRRDCLTQACSALTG
Sbjct: 121 SEALCGVPVLVLANKQDVETCLSIPDIKTAFSDCTSKIGRRDCLTQACSALTG 173


>gi|4507449 ADP-ribosylation factor related protein 1 isoform a
           [Homo sapiens]
          Length = 201

 Score =  351 bits (901), Expect = 2e-97
 Identities = 173/173 (100%), Positives = 173/173 (100%)

Query: 1   MYTLLSGLYKYMFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLN 60
           MYTLLSGLYKYMFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLN
Sbjct: 1   MYTLLSGLYKYMFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLN 60

Query: 61  IGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVT 120
           IGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVT
Sbjct: 61  IGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVT 120

Query: 121 SEALCGVPVLVLANKQDVETCLSIPDIKTAFSDCTSKIGRRDCLTQACSALTG 173
           SEALCGVPVLVLANKQDVETCLSIPDIKTAFSDCTSKIGRRDCLTQACSALTG
Sbjct: 121 SEALCGVPVLVLANKQDVETCLSIPDIKTAFSDCTSKIGRRDCLTQACSALTG 173


>gi|6912244 ADP-ribosylation factor-like 5A isoform 1 [Homo sapiens]
          Length = 179

 Score =  112 bits (280), Expect = 2e-25
 Identities = 63/162 (38%), Positives = 95/162 (58%), Gaps = 10/162 (6%)

Query: 12  MFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLNIGTVDVGKARL 71
           +F   E+ ++I+GLDNAGKTT L Q    F+ N     +   + T+G N+  + +   R 
Sbjct: 11  LFNHQEHKVIIVGLDNAGKTTILYQ----FSMN----EVVHTSPTIGSNVEEIVINNTRF 62

Query: 72  MFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVTSEALCGVPVLV 131
           + WD+GGQE L+S W+ YY     VI V+DSTD ER++ +++   K++  E L    +L+
Sbjct: 63  LMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLI 122

Query: 132 LANKQDVETCLSIPDIKTAFSDCTSKIGRRDCLTQACSALTG 173
            ANKQDV+ C+++ +I + F   TS I       QAC ALTG
Sbjct: 123 FANKQDVKECMTVAEI-SQFLKLTS-IKDHQWHIQACCALTG 162


>gi|148612885 ADP-ribosylation factor-like 2 [Homo sapiens]
          Length = 184

 Score =  108 bits (269), Expect = 3e-24
 Identities = 61/170 (35%), Positives = 93/170 (54%), Gaps = 10/170 (5%)

Query: 4   LLSGLYKYMFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLNIGT 63
           LL+ L K   ++ E  +L+LGLDNAGKTT L        K + G  +  I+ T+G NI T
Sbjct: 3   LLTILKKMKQKERELRLLMLGLDNAGKTTIL--------KKFNGEDIDTISPTLGFNIKT 54

Query: 64  VDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVTSEA 123
           ++    +L  WD+GGQ+ L+S W  Y+    G+I+V+DS D +R+ + ++  + ++  E 
Sbjct: 55  LEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEER 114

Query: 124 LCGVPVLVLANKQDVETCLSIPDIKTAFSDCTSKIGRRDCLTQACSALTG 173
           L G  +L+ ANKQD+   LS   I+         I       Q CSA+TG
Sbjct: 115 LAGATLLIFANKQDLPGALSSNAIREVLE--LDSIRSHHWCIQGCSAVTG 162


>gi|13376574 ADP-ribosylation factor-like 14 [Homo sapiens]
          Length = 192

 Score =  106 bits (265), Expect = 9e-24
 Identities = 61/157 (38%), Positives = 93/157 (59%), Gaps = 14/157 (8%)

Query: 20  ILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITT--TVGLNIGTVDVGK-ARLMFWDL 76
           +L+LGLD+AGK+T L          YK      ITT  T+G N+  +++ +   L  WD+
Sbjct: 16  VLLLGLDSAGKSTLL----------YKLKLAKDITTIPTIGFNVEMIELERNLSLTVWDV 65

Query: 77  GGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVTSEALCGVPVLVLANKQ 136
           GGQE+++++W  Y     G++YV+DSTD++RL ES++ FE ++ +E +  VPV++LANKQ
Sbjct: 66  GGQEKMRTVWGCYCENTDGLVYVVDSTDKQRLEESQRQFEHILKNEHIKNVPVVLLANKQ 125

Query: 137 DVETCLSIPDIKTAFSDCTSKIGRRDCLTQACSALTG 173
           D+   L+  DI   F         R+   Q C ALTG
Sbjct: 126 DMPGALTAEDITRMFK-VKKLCSDRNWYVQPCCALTG 161


>gi|4757774 ADP-ribosylation factor-like 3 [Homo sapiens]
          Length = 182

 Score =  105 bits (261), Expect = 3e-23
 Identities = 70/171 (40%), Positives = 92/171 (53%), Gaps = 11/171 (6%)

Query: 4   LLSGLYKYMFQKD-EYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLNIG 62
           LLS L K     D E  IL+LGLDNAGKTT L+Q  +          +S IT T G NI 
Sbjct: 3   LLSILRKLKSAPDQEVRILLLGLDNAGKTTLLKQLASE--------DISHITPTQGFNIK 54

Query: 63  TVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVTSE 122
           +V     +L  WD+GGQ +++  W  Y+     +IYVIDS D +R  E+ Q   +++  E
Sbjct: 55  SVQSQGFKLNVWDIGGQRKIRPYWKNYFENTDILIYVIDSADRKRFEETGQELAELLEEE 114

Query: 123 ALCGVPVLVLANKQDVETCLSIPDIKTAFSDCTSKIGRRDCLTQACSALTG 173
            L  VPVL+ ANKQD+ T     +I    +  T  I  R    Q+CSALTG
Sbjct: 115 KLSCVPVLIFANKQDLLTAAPASEIAEGLNLHT--IRDRVWQIQSCSALTG 163


>gi|30520350 ADP-ribosylation factor-like 8 [Homo sapiens]
          Length = 179

 Score =  104 bits (259), Expect = 4e-23
 Identities = 60/162 (37%), Positives = 90/162 (55%), Gaps = 10/162 (6%)

Query: 12  MFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLNIGTVDVGKARL 71
           +F   E+ ++I+GLDNAGKTT L Q    F  N     +   + T+G N+  + V     
Sbjct: 11  LFCNQEHKVIIVGLDNAGKTTILYQ----FLMN----EVVHTSPTIGSNVEEIVVKNTHF 62

Query: 72  MFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVTSEALCGVPVLV 131
           + WD+GGQE L+S W+ YY+    +I V+DS D ERLA +K+   +++  E L    VL+
Sbjct: 63  LMWDIGGQESLRSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAAVLI 122

Query: 132 LANKQDVETCLSIPDIKTAFSDCTSKIGRRDCLTQACSALTG 173
            ANKQD++ C++  +I    +   S I       Q+C ALTG
Sbjct: 123 FANKQDMKGCMTAAEISKYLT--LSSIKDHPWHIQSCCALTG 162


>gi|33598956 ADP-ribosylation factor-like 2-like 1 isoform 1 [Homo
           sapiens]
          Length = 428

 Score =  103 bits (256), Expect = 1e-22
 Identities = 59/156 (37%), Positives = 87/156 (55%), Gaps = 11/156 (7%)

Query: 20  ILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLNIGTVDVGKARLMFWDLGGQ 79
           +L++GLDNAGKT           K  +G     +  TVG +   +  GK  +  +DLGG 
Sbjct: 24  LLMVGLDNAGKTATA--------KGIQGEYPEDVAPTVGFSKINLRQGKFEVTIFDLGGG 75

Query: 80  EELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVTSEALCGVPVLVLANKQDVE 139
             ++ +W  YYAE +GVI+V+DS+DEER+ E+K+A  +++    + G P+LVLANKQD E
Sbjct: 76  IRIRGIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRHPRISGKPILVLANKQDKE 135

Query: 140 TCLSIPDIKTAFSDCTSKIGRRDCLTQ--ACSALTG 173
             L   D+    S     +    CL Q   CSA++G
Sbjct: 136 GALGEADVIECLS-LEKLVNEHKCLCQIEPCSAISG 170


>gi|66879664 ADP-ribosylation factor 1 [Homo sapiens]
          Length = 181

 Score = 99.0 bits (245), Expect = 2e-21
 Identities = 61/181 (33%), Positives = 97/181 (53%), Gaps = 26/181 (14%)

Query: 1   MYTLLSGLYKYMFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTV--- 57
           M  + + L+K +F K E  IL++GLD AGKTT L          YK + L +I TT+   
Sbjct: 1   MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTIL----------YK-LKLGEIVTTIPTI 49

Query: 58  GLNIGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEK 117
           G N+ TV+        WD+GGQ++++ LW  Y+    G+I+V+DS D ER+ E+++   +
Sbjct: 50  GFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMR 109

Query: 118 VVTSEALCGVPVLVLANKQDVETCLSIPDIKTAFSDCTSKIG-----RRDCLTQACSALT 172
           ++  + L    +LV ANKQD+   ++  +I       T K+G      R+   QA  A +
Sbjct: 110 MLAEDELRDAVLLVFANKQDLPNAMNAAEI-------TDKLGLHSLRHRNWYIQATCATS 162

Query: 173 G 173
           G
Sbjct: 163 G 163


>gi|66879662 ADP-ribosylation factor 1 [Homo sapiens]
          Length = 181

 Score = 99.0 bits (245), Expect = 2e-21
 Identities = 61/181 (33%), Positives = 97/181 (53%), Gaps = 26/181 (14%)

Query: 1   MYTLLSGLYKYMFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTV--- 57
           M  + + L+K +F K E  IL++GLD AGKTT L          YK + L +I TT+   
Sbjct: 1   MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTIL----------YK-LKLGEIVTTIPTI 49

Query: 58  GLNIGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEK 117
           G N+ TV+        WD+GGQ++++ LW  Y+    G+I+V+DS D ER+ E+++   +
Sbjct: 50  GFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMR 109

Query: 118 VVTSEALCGVPVLVLANKQDVETCLSIPDIKTAFSDCTSKIG-----RRDCLTQACSALT 172
           ++  + L    +LV ANKQD+   ++  +I       T K+G      R+   QA  A +
Sbjct: 110 MLAEDELRDAVLLVFANKQDLPNAMNAAEI-------TDKLGLHSLRHRNWYIQATCATS 162

Query: 173 G 173
           G
Sbjct: 163 G 163


>gi|66879660 ADP-ribosylation factor 1 [Homo sapiens]
          Length = 181

 Score = 99.0 bits (245), Expect = 2e-21
 Identities = 61/181 (33%), Positives = 97/181 (53%), Gaps = 26/181 (14%)

Query: 1   MYTLLSGLYKYMFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTV--- 57
           M  + + L+K +F K E  IL++GLD AGKTT L          YK + L +I TT+   
Sbjct: 1   MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTIL----------YK-LKLGEIVTTIPTI 49

Query: 58  GLNIGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEK 117
           G N+ TV+        WD+GGQ++++ LW  Y+    G+I+V+DS D ER+ E+++   +
Sbjct: 50  GFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMR 109

Query: 118 VVTSEALCGVPVLVLANKQDVETCLSIPDIKTAFSDCTSKIG-----RRDCLTQACSALT 172
           ++  + L    +LV ANKQD+   ++  +I       T K+G      R+   QA  A +
Sbjct: 110 MLAEDELRDAVLLVFANKQDLPNAMNAAEI-------TDKLGLHSLRHRNWYIQATCATS 162

Query: 173 G 173
           G
Sbjct: 163 G 163


>gi|4502201 ADP-ribosylation factor 1 [Homo sapiens]
          Length = 181

 Score = 99.0 bits (245), Expect = 2e-21
 Identities = 61/181 (33%), Positives = 97/181 (53%), Gaps = 26/181 (14%)

Query: 1   MYTLLSGLYKYMFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTV--- 57
           M  + + L+K +F K E  IL++GLD AGKTT L          YK + L +I TT+   
Sbjct: 1   MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTIL----------YK-LKLGEIVTTIPTI 49

Query: 58  GLNIGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEK 117
           G N+ TV+        WD+GGQ++++ LW  Y+    G+I+V+DS D ER+ E+++   +
Sbjct: 50  GFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMR 109

Query: 118 VVTSEALCGVPVLVLANKQDVETCLSIPDIKTAFSDCTSKIG-----RRDCLTQACSALT 172
           ++  + L    +LV ANKQD+   ++  +I       T K+G      R+   QA  A +
Sbjct: 110 MLAEDELRDAVLLVFANKQDLPNAMNAAEI-------TDKLGLHSLRHRNWYIQATCATS 162

Query: 173 G 173
           G
Sbjct: 163 G 163


>gi|4502209 ADP-ribosylation factor 5 [Homo sapiens]
          Length = 180

 Score = 96.7 bits (239), Expect = 9e-21
 Identities = 56/158 (35%), Positives = 87/158 (55%), Gaps = 21/158 (13%)

Query: 5   LSGLYKYMFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTV---GLNI 61
           +S L+  +F K +  IL++GLD AGKTT L          YK + L +I TT+   G N+
Sbjct: 5   VSALFSRIFGKKQMRILMVGLDAAGKTTIL----------YK-LKLGEIVTTIPTIGFNV 53

Query: 62  GTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVTS 121
            TV+        WD+GGQ++++ LW  Y+    G+I+V+DS D ER+ ES    +K++  
Sbjct: 54  ETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQE 113

Query: 122 EALCGVPVLVLANKQDVETCLSIPDIKTAFSDCTSKIG 159
           + L    +LV ANKQD+   + +       S+ T K+G
Sbjct: 114 DELRDAVLLVFANKQDMPNAMPV-------SELTDKLG 144


>gi|4502203 ADP-ribosylation factor 3 [Homo sapiens]
          Length = 181

 Score = 95.1 bits (235), Expect = 3e-20
 Identities = 60/181 (33%), Positives = 94/181 (51%), Gaps = 26/181 (14%)

Query: 1   MYTLLSGLYKYMFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTV--- 57
           M  +   L K +  K E  IL++GLD AGKTT L          YK + L +I TT+   
Sbjct: 1   MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTIL----------YK-LKLGEIVTTIPTI 49

Query: 58  GLNIGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEK 117
           G N+ TV+        WD+GGQ++++ LW  Y+    G+I+V+DS D ER+ E+++   +
Sbjct: 50  GFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMR 109

Query: 118 VVTSEALCGVPVLVLANKQDVETCLSIPDIKTAFSDCTSKIG-----RRDCLTQACSALT 172
           ++  + L    +LV ANKQD+   ++  +I       T K+G      R+   QA  A +
Sbjct: 110 MLAEDELRDAVLLVFANKQDLPNAMNAAEI-------TDKLGLHSLRHRNWYIQATCATS 162

Query: 173 G 173
           G
Sbjct: 163 G 163


>gi|4502205 ADP-ribosylation factor 4 [Homo sapiens]
          Length = 180

 Score = 94.7 bits (234), Expect = 3e-20
 Identities = 55/158 (34%), Positives = 86/158 (54%), Gaps = 21/158 (13%)

Query: 5   LSGLYKYMFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTV---GLNI 61
           +S L+  +F K +  IL++GLD AGKTT L          YK + L +I TT+   G N+
Sbjct: 5   ISSLFSRLFGKKQMRILMVGLDAAGKTTIL----------YK-LKLGEIVTTIPTIGFNV 53

Query: 62  GTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVTS 121
            TV+        WD+GGQ+ ++ LW  Y+    G+I+V+DS D ER+ E     +K++  
Sbjct: 54  ETVEYKNICFTVWDVGGQDRIRPLWKHYFQNTQGLIFVVDSNDRERIQEVADELQKMLLV 113

Query: 122 EALCGVPVLVLANKQDVETCLSIPDIKTAFSDCTSKIG 159
           + L    +L+ ANKQD+   ++I       S+ T K+G
Sbjct: 114 DELRDAVLLLFANKQDLPNAMAI-------SEMTDKLG 144


>gi|81295813 ADP-ribosylation factor-like 4A [Homo sapiens]
          Length = 200

 Score = 94.4 bits (233), Expect = 4e-20
 Identities = 57/134 (42%), Positives = 79/134 (58%), Gaps = 13/134 (9%)

Query: 20  ILILGLDNAGKTTFLEQSKTRFNKNY-----KGMSLSKITTTVGLNIGTVDVGKARLMFW 74
           I+ILGLD AGKTT L   + +FN+       KG +  KI  T+G N  TV        FW
Sbjct: 23  IVILGLDCAGKTTVLY--RLQFNEFVNTVPTKGFNTEKIKVTLG-NSKTVT-----FHFW 74

Query: 75  DLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVTSEALCGVPVLVLAN 134
           D+GGQE+L+ LW  Y     G+++V+DS D ER+ E+K    K+       GVPVL++AN
Sbjct: 75  DVGGQEKLRPLWKSYTRCTDGIVFVVDSVDVERMEEAKTELHKITRISENQGVPVLIVAN 134

Query: 135 KQDVETCLSIPDIK 148
           KQD+   LS+ +I+
Sbjct: 135 KQDLRNSLSLSEIE 148


>gi|47078227 ADP-ribosylation factor-like 4A [Homo sapiens]
          Length = 200

 Score = 94.4 bits (233), Expect = 4e-20
 Identities = 57/134 (42%), Positives = 79/134 (58%), Gaps = 13/134 (9%)

Query: 20  ILILGLDNAGKTTFLEQSKTRFNKNY-----KGMSLSKITTTVGLNIGTVDVGKARLMFW 74
           I+ILGLD AGKTT L   + +FN+       KG +  KI  T+G N  TV        FW
Sbjct: 23  IVILGLDCAGKTTVLY--RLQFNEFVNTVPTKGFNTEKIKVTLG-NSKTVT-----FHFW 74

Query: 75  DLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVTSEALCGVPVLVLAN 134
           D+GGQE+L+ LW  Y     G+++V+DS D ER+ E+K    K+       GVPVL++AN
Sbjct: 75  DVGGQEKLRPLWKSYTRCTDGIVFVVDSVDVERMEEAKTELHKITRISENQGVPVLIVAN 134

Query: 135 KQDVETCLSIPDIK 148
           KQD+   LS+ +I+
Sbjct: 135 KQDLRNSLSLSEIE 148


>gi|5031603 ADP-ribosylation factor-like 4A [Homo sapiens]
          Length = 200

 Score = 94.4 bits (233), Expect = 4e-20
 Identities = 57/134 (42%), Positives = 79/134 (58%), Gaps = 13/134 (9%)

Query: 20  ILILGLDNAGKTTFLEQSKTRFNKNY-----KGMSLSKITTTVGLNIGTVDVGKARLMFW 74
           I+ILGLD AGKTT L   + +FN+       KG +  KI  T+G N  TV        FW
Sbjct: 23  IVILGLDCAGKTTVLY--RLQFNEFVNTVPTKGFNTEKIKVTLG-NSKTVT-----FHFW 74

Query: 75  DLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVTSEALCGVPVLVLAN 134
           D+GGQE+L+ LW  Y     G+++V+DS D ER+ E+K    K+       GVPVL++AN
Sbjct: 75  DVGGQEKLRPLWKSYTRCTDGIVFVVDSVDVERMEEAKTELHKITRISENQGVPVLIVAN 134

Query: 135 KQDVETCLSIPDIK 148
           KQD+   LS+ +I+
Sbjct: 135 KQDLRNSLSLSEIE 148


>gi|4502211 ADP-ribosylation factor 6 [Homo sapiens]
          Length = 175

 Score = 92.8 bits (229), Expect = 1e-19
 Identities = 53/162 (32%), Positives = 86/162 (53%), Gaps = 10/162 (6%)

Query: 12  MFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLNIGTVDVGKARL 71
           +F   E  IL+LGLD AGKTT L + K        G S++ I T VG N+ TV     + 
Sbjct: 8   IFGNKEMRILMLGLDAAGKTTILYKLKL-------GQSVTTIPT-VGFNVETVTYKNVKF 59

Query: 72  MFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVTSEALCGVPVLV 131
             WD+GGQ++++ LW  YY    G+I+V+D  D +R+ E++Q   +++    +    +L+
Sbjct: 60  NVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILI 119

Query: 132 LANKQDVETCLSIPDIKTAFSDCTSKIGRRDCLTQACSALTG 173
            ANKQD+   +   +I+       ++I  R+   Q   A +G
Sbjct: 120 FANKQDLPDAMKPHEIQEKLG--LTRIRDRNWYVQPSCATSG 159


>gi|19923979 ADP-ribosylation factor-like 11 [Homo sapiens]
          Length = 196

 Score = 92.8 bits (229), Expect = 1e-19
 Identities = 59/160 (36%), Positives = 82/160 (51%), Gaps = 11/160 (6%)

Query: 15  KDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLNIGTVDV-GKARLMF 73
           K E  ++++GLD+AGKTT L +         KG  L +   TVG N+  +   G   L  
Sbjct: 10  KAEAQVVMMGLDSAGKTTLLYK--------LKGHQLVETLPTVGFNVEPLKAPGHVSLTL 61

Query: 74  WDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVTSEALCGVPVLVLA 133
           WD+GGQ  L++ W  Y      ++YV+DSTDE RL ES     +V+    + GVP LVLA
Sbjct: 62  WDVGGQAPLRASWKDYLEGTDILVYVLDSTDEARLPESAAELTEVLNDPNMAGVPFLVLA 121

Query: 134 NKQDVETCLSIPDIKTAFSDCTSKIGRRDCLTQACSALTG 173
           NKQ+    L +  I+   S    +        + CSALTG
Sbjct: 122 NKQEAPDALPLLKIRNRLS--LERFQDHCWELRGCSALTG 159


>gi|82546836 ADP-ribosylation factor-like 5A isoform 2 [Homo
           sapiens]
          Length = 142

 Score = 91.7 bits (226), Expect = 3e-19
 Identities = 47/118 (39%), Positives = 71/118 (60%), Gaps = 2/118 (1%)

Query: 56  TVGLNIGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAF 115
           T+G N+  + +   R + WD+GGQE L+S W+ YY     VI V+DSTD ER++ +++  
Sbjct: 10  TIGSNVEEIVINNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREEL 69

Query: 116 EKVVTSEALCGVPVLVLANKQDVETCLSIPDIKTAFSDCTSKIGRRDCLTQACSALTG 173
            K++  E L    +L+ ANKQDV+ C+++ +I + F   TS I       QAC ALTG
Sbjct: 70  YKMLAHEDLRKAGLLIFANKQDVKECMTVAEI-SQFLKLTS-IKDHQWHIQACCALTG 125


>gi|82546838 ADP-ribosylation factor-like 5A isoform 2 [Homo
           sapiens]
          Length = 142

 Score = 91.7 bits (226), Expect = 3e-19
 Identities = 47/118 (39%), Positives = 71/118 (60%), Gaps = 2/118 (1%)

Query: 56  TVGLNIGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAF 115
           T+G N+  + +   R + WD+GGQE L+S W+ YY     VI V+DSTD ER++ +++  
Sbjct: 10  TIGSNVEEIVINNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREEL 69

Query: 116 EKVVTSEALCGVPVLVLANKQDVETCLSIPDIKTAFSDCTSKIGRRDCLTQACSALTG 173
            K++  E L    +L+ ANKQDV+ C+++ +I + F   TS I       QAC ALTG
Sbjct: 70  YKMLAHEDLRKAGLLIFANKQDVKECMTVAEI-SQFLKLTS-IKDHQWHIQACCALTG 125


>gi|4502197 ADP-ribosylation factor domain protein 1 isoform alpha
           [Homo sapiens]
          Length = 574

 Score = 90.9 bits (224), Expect = 5e-19
 Identities = 53/159 (33%), Positives = 81/159 (50%), Gaps = 9/159 (5%)

Query: 15  KDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLNIGTVDVGKARLMFW 74
           K E  ++ LGLD AGKTT L + K             +   T+G N+ TV+    +   W
Sbjct: 402 KMEIRVVTLGLDGAGKTTILFKLKQD--------EFMQPIPTIGFNVETVEYKNLKFTIW 453

Query: 75  DLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVTSEALCGVPVLVLAN 134
           D+GG+ +L+ LW  YY     V++V+DS+  +R++E+     K++T + L    +L+ AN
Sbjct: 454 DVGGKHKLRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAKLLTEKELRDALLLIFAN 513

Query: 135 KQDVETCLSIPDIKTAFSDCTSKIGRRDCLTQACSALTG 173
           KQDV   LS+ +I    S      G R    Q C A +G
Sbjct: 514 KQDVAGALSVEEITELLSLHKLCCG-RSWYIQGCDARSG 551


>gi|20270343 ADP-ribosylation factor-like 8A [Homo sapiens]
          Length = 186

 Score = 90.5 bits (223), Expect = 6e-19
 Identities = 44/143 (30%), Positives = 80/143 (55%), Gaps = 9/143 (6%)

Query: 1   MYTLLSGLYKYMFQKDEYCILILGLDNAGKTTFLEQ-SKTRFNKNYKGMSLSKITTTVGL 59
           ++  L   +K +F K+E  + ++GL  +GKTTF+   +  +FN++        +  TVG 
Sbjct: 4   LFNKLLDWFKALFWKEEMELTLVGLQYSGKTTFVNVIASGQFNED--------MIPTVGF 55

Query: 60  NIGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVV 119
           N+  +  G   +  WD+GGQ   +S+W++Y      ++Y++D+ D+E++  SK     ++
Sbjct: 56  NMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLL 115

Query: 120 TSEALCGVPVLVLANKQDVETCL 142
               L G+PVLVL NK+D+   L
Sbjct: 116 DKPQLQGIPVLVLGNKRDLPGAL 138


>gi|221219071 ADP-ribosylation factor-like 5C [Homo sapiens]
          Length = 179

 Score = 90.1 bits (222), Expect = 8e-19
 Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 10/161 (6%)

Query: 12  MFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLNIGTVDVGKARL 71
           +F   E+ ++I+GLDN GKTT L +  T          +  +  T+G N+  + + K   
Sbjct: 11  IFGNQEHTVIIVGLDNEGKTTILYRFLTN--------EVVHMCPTIGSNVEEIILPKTHF 62

Query: 72  MFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVTSEALCGVPVLV 131
             WD+   E L  +W+ YY+    +I VIDSTD +RL  +++   K++  EAL    VL+
Sbjct: 63  FMWDIVRPEALSFIWNTYYSNTEFIILVIDSTDRDRLLTTREELYKMLAHEALQDASVLI 122

Query: 132 LANKQDVETCLSIPDIKTAFSDCTSKIGRRDCLTQACSALT 172
            ANKQDV+  + + +I    +   S I       Q C ALT
Sbjct: 123 FANKQDVKDSMRMVEISHFLT--LSTIKDHSWHIQGCCALT 161


>gi|8922601 ADP-ribosylation factor-like 10C [Homo sapiens]
          Length = 186

 Score = 90.1 bits (222), Expect = 8e-19
 Identities = 47/145 (32%), Positives = 78/145 (53%), Gaps = 10/145 (6%)

Query: 1   MYTLLSGL---YKYMFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTV 57
           M  L+S L   ++ +F K+E  + ++GL  +GKTTF+       N    G     +  TV
Sbjct: 1   MLALISRLLDWFRSLFWKEEMELTLVGLQYSGKTTFV-------NVIASGQFSEDMIPTV 53

Query: 58  GLNIGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEK 117
           G N+  V  G   +  WD+GGQ   +S+W++Y    + ++Y+ID+ D E++  S+     
Sbjct: 54  GFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHN 113

Query: 118 VVTSEALCGVPVLVLANKQDVETCL 142
           ++    L G+PVLVL NK+D+   L
Sbjct: 114 LLDKPQLQGIPVLVLGNKRDLPNAL 138


>gi|4502227 ADP-ribosylation factor-like 1 [Homo sapiens]
          Length = 181

 Score = 89.4 bits (220), Expect = 1e-18
 Identities = 52/140 (37%), Positives = 73/140 (52%), Gaps = 12/140 (8%)

Query: 6   SGLYKYMFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITT--TVGLNIGT 63
           S ++  +F   E  ILILGLD AGKTT L          Y+      +TT  T+G N+ T
Sbjct: 6   SSIFSSLFGTREMRILILGLDGAGKTTIL----------YRLQVGEVVTTIPTIGFNVET 55

Query: 64  VDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVTSEA 123
           V     +   WDLGGQ  ++  W  YY+    VIYV+DS D +R+  SK     ++  E 
Sbjct: 56  VTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEE 115

Query: 124 LCGVPVLVLANKQDVETCLS 143
           L    ++V ANKQD+E  ++
Sbjct: 116 LRKAILVVFANKQDMEQAMT 135


>gi|15208643 ADP-ribosylation factor domain protein 1 isoform gamma
           [Homo sapiens]
          Length = 546

 Score = 89.4 bits (220), Expect = 1e-18
 Identities = 47/138 (34%), Positives = 74/138 (53%), Gaps = 8/138 (5%)

Query: 15  KDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLNIGTVDVGKARLMFW 74
           K E  ++ LGLD AGKTT L + K             +   T+G N+ TV+    +   W
Sbjct: 402 KMEIRVVTLGLDGAGKTTILFKLKQD--------EFMQPIPTIGFNVETVEYKNLKFTIW 453

Query: 75  DLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVTSEALCGVPVLVLAN 134
           D+GG+ +L+ LW  YY     V++V+DS+  +R++E+     K++T + L    +L+ AN
Sbjct: 454 DVGGKHKLRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAKLLTEKELRDALLLIFAN 513

Query: 135 KQDVETCLSIPDIKTAFS 152
           KQDV   LS+ +I    S
Sbjct: 514 KQDVAGALSVEEITELLS 531


>gi|15208641 ADP-ribosylation factor domain protein 1 isoform beta
           [Homo sapiens]
          Length = 569

 Score = 89.4 bits (220), Expect = 1e-18
 Identities = 47/138 (34%), Positives = 74/138 (53%), Gaps = 8/138 (5%)

Query: 15  KDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLNIGTVDVGKARLMFW 74
           K E  ++ LGLD AGKTT L + K             +   T+G N+ TV+    +   W
Sbjct: 402 KMEIRVVTLGLDGAGKTTILFKLKQD--------EFMQPIPTIGFNVETVEYKNLKFTIW 453

Query: 75  DLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVTSEALCGVPVLVLAN 134
           D+GG+ +L+ LW  YY     V++V+DS+  +R++E+     K++T + L    +L+ AN
Sbjct: 454 DVGGKHKLRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAKLLTEKELRDALLLIFAN 513

Query: 135 KQDVETCLSIPDIKTAFS 152
           KQDV   LS+ +I    S
Sbjct: 514 KQDVAGALSVEEITELLS 531


>gi|6552296 ADP-ribosylation factor-like 4C [Homo sapiens]
          Length = 192

 Score = 88.2 bits (217), Expect = 3e-18
 Identities = 52/134 (38%), Positives = 73/134 (54%), Gaps = 13/134 (9%)

Query: 20  ILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLNIGTVDVGKARLM-----FW 74
           I++LGLD+AGKTT L + K  FN+            T+G N   + +           FW
Sbjct: 16  IVMLGLDSAGKTTVLYRLK--FNE------FVNTVPTIGFNTEKIKLSNGTAKGISCHFW 67

Query: 75  DLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVTSEALCGVPVLVLAN 134
           D+GGQE+L+ LW  Y     G+IYV+DS D +RL E+K    KV       G P+LV+AN
Sbjct: 68  DVGGQEKLRPLWKSYSRCTDGIIYVVDSVDVDRLEEAKTELHKVTKFAENQGTPLLVIAN 127

Query: 135 KQDVETCLSIPDIK 148
           KQD+   L + +I+
Sbjct: 128 KQDLPKSLPVAEIE 141


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.135    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,742,846
Number of Sequences: 37866
Number of extensions: 211699
Number of successful extensions: 811
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 559
Number of HSP's gapped (non-prelim): 223
length of query: 173
length of database: 18,247,518
effective HSP length: 95
effective length of query: 78
effective length of database: 14,650,248
effective search space: 1142719344
effective search space used: 1142719344
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press