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Search of human proteins with 19718751
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|19718751 uracil-DNA glycosylase isoform UNG2 [Homo sapiens]
(313 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|19718751 uracil-DNA glycosylase isoform UNG2 [Homo sapiens] 654 0.0
gi|6224979 uracil-DNA glycosylase isoform UNG1 precursor [Homo s... 566 e-161
gi|155029548 phosphofurin acidic cluster sorting protein 2 isofo... 35 0.066
gi|155029546 phosphofurin acidic cluster sorting protein 2 isofo... 35 0.066
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 35 0.066
gi|56549129 transmembrane anchor protein 1 isoform 3 [Homo sapiens] 35 0.066
gi|56549133 transmembrane anchor protein 1 isoform 2 [Homo sapiens] 35 0.066
gi|56549131 transmembrane anchor protein 1 isoform 1 [Homo sapiens] 35 0.066
gi|30795231 brain abundant, membrane attached signal protein 1 [... 34 0.19
gi|239741896 PREDICTED: hypothetical protein XP_002342335 [Homo ... 34 0.19
gi|82546824 forkhead box K1 [Homo sapiens] 33 0.33
gi|145309320 forkhead box Q1 [Homo sapiens] 33 0.43
gi|24307909 ral guanine nucleotide dissociation stimulator isofo... 33 0.43
gi|108796058 ral guanine nucleotide dissociation stimulator isof... 33 0.43
gi|38787970 tensin like C1 domain containing phosphatase isoform... 33 0.43
gi|38787957 tensin like C1 domain containing phosphatase isoform... 33 0.43
gi|38787941 tensin like C1 domain containing phosphatase isoform... 33 0.43
gi|42475941 zinc finger protein 261 [Homo sapiens] 33 0.43
gi|4827067 zinc finger protein 261 [Homo sapiens] 33 0.43
gi|128485756 hexaribonucleotide binding protein 3 [Homo sapiens] 33 0.43
gi|210032580 SET domain containing 1B [Homo sapiens] 33 0.43
gi|145312251 EPH receptor A6 isoform a [Homo sapiens] 33 0.43
gi|134288906 tripartite motif-containing 67 [Homo sapiens] 33 0.43
gi|18079216 CASK interacting protein 1 [Homo sapiens] 32 0.56
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 32 0.56
gi|83921602 solute carrier family 38, member 10 isoform a [Homo ... 32 0.56
gi|71043876 undifferentiated embryonic cell transcription factor... 32 0.56
gi|164698460 mannosidase, endo-alpha-like isoform 3 [Homo sapiens] 32 0.56
gi|72534766 mannosidase, endo-alpha-like isoform 1 [Homo sapiens] 32 0.56
gi|169164209 PREDICTED: hypothetical protein [Homo sapiens] 32 0.73
>gi|19718751 uracil-DNA glycosylase isoform UNG2 [Homo sapiens]
Length = 313
Score = 654 bits (1687), Expect = 0.0
Identities = 313/313 (100%), Positives = 313/313 (100%)
Query: 1 MIGQKTLYSFFSPSPARKRHAPSPEPAVQGTGVAGVPEESGDAAAIPAKKAPAGQEEPGT 60
MIGQKTLYSFFSPSPARKRHAPSPEPAVQGTGVAGVPEESGDAAAIPAKKAPAGQEEPGT
Sbjct: 1 MIGQKTLYSFFSPSPARKRHAPSPEPAVQGTGVAGVPEESGDAAAIPAKKAPAGQEEPGT 60
Query: 61 PPSSPLSAEQLDRIQRNKAAALLRLAARNVPVGFGESWKKHLSGEFGKPYFIKLMGFVAE 120
PPSSPLSAEQLDRIQRNKAAALLRLAARNVPVGFGESWKKHLSGEFGKPYFIKLMGFVAE
Sbjct: 61 PPSSPLSAEQLDRIQRNKAAALLRLAARNVPVGFGESWKKHLSGEFGKPYFIKLMGFVAE 120
Query: 121 ERKHYTVYPPPHQVFTWTQMCDIKDVKVVILGQDPYHGPNQAHGLCFSVQRPVPPPPSLE 180
ERKHYTVYPPPHQVFTWTQMCDIKDVKVVILGQDPYHGPNQAHGLCFSVQRPVPPPPSLE
Sbjct: 121 ERKHYTVYPPPHQVFTWTQMCDIKDVKVVILGQDPYHGPNQAHGLCFSVQRPVPPPPSLE 180
Query: 181 NIYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVS 240
NIYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVS
Sbjct: 181 NIYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVS 240
Query: 241 WLNQNSNGLVFLLWGSYAQKKGSAIDRKRHHVLQTAHPSPLSVYRGFFGCRHFSKTNELL 300
WLNQNSNGLVFLLWGSYAQKKGSAIDRKRHHVLQTAHPSPLSVYRGFFGCRHFSKTNELL
Sbjct: 241 WLNQNSNGLVFLLWGSYAQKKGSAIDRKRHHVLQTAHPSPLSVYRGFFGCRHFSKTNELL 300
Query: 301 QKSGKKPIDWKEL 313
QKSGKKPIDWKEL
Sbjct: 301 QKSGKKPIDWKEL 313
>gi|6224979 uracil-DNA glycosylase isoform UNG1 precursor [Homo
sapiens]
Length = 304
Score = 566 bits (1458), Expect = e-161
Identities = 269/269 (100%), Positives = 269/269 (100%)
Query: 45 AIPAKKAPAGQEEPGTPPSSPLSAEQLDRIQRNKAAALLRLAARNVPVGFGESWKKHLSG 104
AIPAKKAPAGQEEPGTPPSSPLSAEQLDRIQRNKAAALLRLAARNVPVGFGESWKKHLSG
Sbjct: 36 AIPAKKAPAGQEEPGTPPSSPLSAEQLDRIQRNKAAALLRLAARNVPVGFGESWKKHLSG 95
Query: 105 EFGKPYFIKLMGFVAEERKHYTVYPPPHQVFTWTQMCDIKDVKVVILGQDPYHGPNQAHG 164
EFGKPYFIKLMGFVAEERKHYTVYPPPHQVFTWTQMCDIKDVKVVILGQDPYHGPNQAHG
Sbjct: 96 EFGKPYFIKLMGFVAEERKHYTVYPPPHQVFTWTQMCDIKDVKVVILGQDPYHGPNQAHG 155
Query: 165 LCFSVQRPVPPPPSLENIYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQAN 224
LCFSVQRPVPPPPSLENIYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQAN
Sbjct: 156 LCFSVQRPVPPPPSLENIYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQAN 215
Query: 225 SHKERGWEQFTDAVVSWLNQNSNGLVFLLWGSYAQKKGSAIDRKRHHVLQTAHPSPLSVY 284
SHKERGWEQFTDAVVSWLNQNSNGLVFLLWGSYAQKKGSAIDRKRHHVLQTAHPSPLSVY
Sbjct: 216 SHKERGWEQFTDAVVSWLNQNSNGLVFLLWGSYAQKKGSAIDRKRHHVLQTAHPSPLSVY 275
Query: 285 RGFFGCRHFSKTNELLQKSGKKPIDWKEL 313
RGFFGCRHFSKTNELLQKSGKKPIDWKEL
Sbjct: 276 RGFFGCRHFSKTNELLQKSGKKPIDWKEL 304
>gi|155029548 phosphofurin acidic cluster sorting protein 2 isoform
1 [Homo sapiens]
Length = 893
Score = 35.4 bits (80), Expect = 0.066
Identities = 20/62 (32%), Positives = 27/62 (43%)
Query: 24 PEPAVQGTGVAGVPEESGDAAAIPAKKAPAGQEEPGTPPSSPLSAEQLDRIQRNKAAALL 83
P A G P SG ++ P +PA +E TPPSSP + L + A L+
Sbjct: 690 PSSATSGDSDDAAPSGSGTLSSTPPSASPAAKEASPTPPSSPSVSGGLSSPSQGVGAELM 749
Query: 84 RL 85
L
Sbjct: 750 GL 751
>gi|155029546 phosphofurin acidic cluster sorting protein 2 isoform
2 [Homo sapiens]
Length = 889
Score = 35.4 bits (80), Expect = 0.066
Identities = 20/62 (32%), Positives = 27/62 (43%)
Query: 24 PEPAVQGTGVAGVPEESGDAAAIPAKKAPAGQEEPGTPPSSPLSAEQLDRIQRNKAAALL 83
P A G P SG ++ P +PA +E TPPSSP + L + A L+
Sbjct: 686 PSSATSGDSDDAAPSGSGTLSSTPPSASPAAKEASPTPPSSPSVSGGLSSPSQGVGAELM 745
Query: 84 RL 85
L
Sbjct: 746 GL 747
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 35.4 bits (80), Expect = 0.066
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 13 PSPARKRHAPSPEPAVQGTGVAGVPEESGDAAAIPAKKAPAGQEEPGTPPSSPLSA 68
P PAR R AP P P+ T P S + A+P P + P PP+ P SA
Sbjct: 301 PPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVP--PPPPNRMYPPPPPALPSSA 354
Score = 28.5 bits (62), Expect = 8.0
Identities = 21/76 (27%), Positives = 27/76 (35%), Gaps = 6/76 (7%)
Query: 13 PSPARKRHAPSPEPAVQGTGVAGVPEESGDAAAI-----PAKKAPAGQEEPGTPPSSPLS 67
P P R P P PA+ + +G P + P P P PP P
Sbjct: 335 PPPPPNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPPPGLPSD 394
Query: 68 AE-QLDRIQRNKAAAL 82
+ Q+ NKAA L
Sbjct: 395 GDHQVPTTAGNKAALL 410
>gi|56549129 transmembrane anchor protein 1 isoform 3 [Homo
sapiens]
Length = 170
Score = 35.4 bits (80), Expect = 0.066
Identities = 23/50 (46%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Query: 12 SPSPARKRHAPSPEPAVQGTGVAGVPEESGDAAAIPAKKAPAGQEEPGTP 61
SP PAR P P P + T G P S A PA +PAG EEPG P
Sbjct: 34 SPEPARA--PPEPAPPAEAT---GAPAPSRPCAPEPA-ASPAGPEEPGEP 77
Score = 35.4 bits (80), Expect = 0.066
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 11/65 (16%)
Query: 13 PSPARKRHAPS----PEPAVQGTGVAGVPEESGDAAAIPAKKAPAGQEE---PGTPPSSP 65
P+ A APS PEPA G PEE G+ A + PAG E PG P ++P
Sbjct: 47 PAEATGAPAPSRPCAPEPAASPAG----PEEPGEPAGLGELGEPAGPGEPEGPGDPAAAP 102
Query: 66 LSAEQ 70
AE+
Sbjct: 103 AEAEE 107
>gi|56549133 transmembrane anchor protein 1 isoform 2 [Homo
sapiens]
Length = 177
Score = 35.4 bits (80), Expect = 0.066
Identities = 23/50 (46%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Query: 12 SPSPARKRHAPSPEPAVQGTGVAGVPEESGDAAAIPAKKAPAGQEEPGTP 61
SP PAR P P P + T G P S A PA +PAG EEPG P
Sbjct: 34 SPEPARA--PPEPAPPAEAT---GAPAPSRPCAPEPA-ASPAGPEEPGEP 77
Score = 35.4 bits (80), Expect = 0.066
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 11/65 (16%)
Query: 13 PSPARKRHAPS----PEPAVQGTGVAGVPEESGDAAAIPAKKAPAGQEE---PGTPPSSP 65
P+ A APS PEPA G PEE G+ A + PAG E PG P ++P
Sbjct: 47 PAEATGAPAPSRPCAPEPAASPAG----PEEPGEPAGLGELGEPAGPGEPEGPGDPAAAP 102
Query: 66 LSAEQ 70
AE+
Sbjct: 103 AEAEE 107
>gi|56549131 transmembrane anchor protein 1 isoform 1 [Homo
sapiens]
Length = 204
Score = 35.4 bits (80), Expect = 0.066
Identities = 23/50 (46%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Query: 12 SPSPARKRHAPSPEPAVQGTGVAGVPEESGDAAAIPAKKAPAGQEEPGTP 61
SP PAR P P P + T G P S A PA +PAG EEPG P
Sbjct: 34 SPEPARA--PPEPAPPAEAT---GAPAPSRPCAPEPA-ASPAGPEEPGEP 77
Score = 35.4 bits (80), Expect = 0.066
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 11/65 (16%)
Query: 13 PSPARKRHAPS----PEPAVQGTGVAGVPEESGDAAAIPAKKAPAGQEE---PGTPPSSP 65
P+ A APS PEPA G PEE G+ A + PAG E PG P ++P
Sbjct: 47 PAEATGAPAPSRPCAPEPAASPAG----PEEPGEPAGLGELGEPAGPGEPEGPGDPAAAP 102
Query: 66 LSAEQ 70
AE+
Sbjct: 103 AEAEE 107
>gi|30795231 brain abundant, membrane attached signal protein 1
[Homo sapiens]
Length = 227
Score = 33.9 bits (76), Expect = 0.19
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 21 APSPEPAVQGTGVAGVPEESGDAAAIPAKK-APAGQEEPGTPPSSPLSAE 69
AP E A G G ++ +AAA PA+ APA EEP P E
Sbjct: 103 APEQEQAAPGPAAGGEAPKAAEAAAAPAESAAPAAGEEPSKEEGEPKKTE 152
>gi|239741896 PREDICTED: hypothetical protein XP_002342335 [Homo
sapiens]
Length = 347
Score = 33.9 bits (76), Expect = 0.19
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 6/53 (11%)
Query: 18 KRHAPSPEPAVQGTGVAG--VPEESGDAAAIPAKKAPA----GQEEPGTPPSS 64
+R P P P + +G +G +P + +AA PA++ PA G++ P PPSS
Sbjct: 190 ERVGPKPLPEQERSGASGRCLPAPAAFSAAAPARRPPACLPEGEDAPVAPPSS 242
>gi|82546824 forkhead box K1 [Homo sapiens]
Length = 733
Score = 33.1 bits (74), Expect = 0.33
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 21/119 (17%)
Query: 13 PSPARKRHAPSPEP---------AVQG-------TGVAGVPEESGDAAAIPAKKAPAGQE 56
P+PA+ + P P P A+ G +GV+G +G A A+ A A + ++
Sbjct: 41 PAPAQPQPPPGPPPPPPPPLPPGAIAGAGSSGGSSGVSGDSAVAGAAPALVAAAAASVRQ 100
Query: 57 EPGTPPSSPLSAEQLDRIQRNKAAALLRLAAR-NVPVGFGES---WKKHLSGEFGKPYF 111
PG P + L + + + R + + R +++ +V + G S ++HL F +P+F
Sbjct: 101 SPG-PALARLEGREFEFLMRQPSVTIGRNSSQGSVDLSMGLSSFISRRHLQLSFQEPHF 158
>gi|145309320 forkhead box Q1 [Homo sapiens]
Length = 403
Score = 32.7 bits (73), Expect = 0.43
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Query: 1 MIGQKTLYSFFSPSPARKR-----HAPSPEPAVQGTGVAGVPEESGDAAAIPAK---KAP 52
M+ + Y+F R+R AP P P ++ G+P A A PA ++P
Sbjct: 195 MLNPNSEYTFADGVFRRRRKRLSHRAPVPAPGLRPEEAPGLPAAPPPAPAAPASPRMRSP 254
Query: 53 AGQEEPGTPPSSPLSAEQLDRIQR 76
A QEE +P S+ +D I R
Sbjct: 255 ARQEERASPAGKFSSSFAIDSILR 278
>gi|24307909 ral guanine nucleotide dissociation stimulator isoform
1 [Homo sapiens]
Length = 914
Score = 32.7 bits (73), Expect = 0.43
Identities = 42/150 (28%), Positives = 57/150 (38%), Gaps = 26/150 (17%)
Query: 12 SPSPARKRHAPSPEPAVQGTGVAGVPEESGDAAAIPAKKAPAGQEEPGTP-PSSPLSAEQ 70
+PSP AP+PEP T G E A A ++AP EP S+P A +
Sbjct: 282 APSPVP---APAPEPEPAPTPAPGSELEVAPAPAPELQQAP----EPAVGLESAPAPALE 334
Query: 71 LDRIQRNKAAALLRLAARNVPV---GFGESWKKHLSGEFGKPYFIKLMGFVAEERKHYTV 127
L+ A L P SW + E G ++EE+ H V
Sbjct: 335 LEPAPEQDPAPSQTLELEPAPAPVPSLQPSWPSPVVAENG----------LSEEKPHLLV 384
Query: 128 YPPPHQVFTWTQMCDIKDVKVVILGQDPYH 157
+PP +T M D + K V+ PYH
Sbjct: 385 FPPDLVAEQFTLM-DAELFKKVV----PYH 409
>gi|108796058 ral guanine nucleotide dissociation stimulator isoform
2 [Homo sapiens]
Length = 859
Score = 32.7 bits (73), Expect = 0.43
Identities = 42/150 (28%), Positives = 57/150 (38%), Gaps = 26/150 (17%)
Query: 12 SPSPARKRHAPSPEPAVQGTGVAGVPEESGDAAAIPAKKAPAGQEEPGTP-PSSPLSAEQ 70
+PSP AP+PEP T G E A A ++AP EP S+P A +
Sbjct: 227 APSPVP---APAPEPEPAPTPAPGSELEVAPAPAPELQQAP----EPAVGLESAPAPALE 279
Query: 71 LDRIQRNKAAALLRLAARNVPV---GFGESWKKHLSGEFGKPYFIKLMGFVAEERKHYTV 127
L+ A L P SW + E G ++EE+ H V
Sbjct: 280 LEPAPEQDPAPSQTLELEPAPAPVPSLQPSWPSPVVAENG----------LSEEKPHLLV 329
Query: 128 YPPPHQVFTWTQMCDIKDVKVVILGQDPYH 157
+PP +T M D + K V+ PYH
Sbjct: 330 FPPDLVAEQFTLM-DAELFKKVV----PYH 354
>gi|38787970 tensin like C1 domain containing phosphatase isoform 3
[Homo sapiens]
Length = 1285
Score = 32.7 bits (73), Expect = 0.43
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Query: 8 YSFFSPSPARKRHAPSPEPAVQGTGVAGVPEESGDAAAIPAKKAPAGQEEPGTPPSSPLS 67
Y+ P + APSPEP + V +SG ++ + + A E PG PP +
Sbjct: 359 YAQVQRPPRQTPPAPSPEPPPPP--MLSVSSDSGHSSTLTTEPAA---ESPGRPPPTAAE 413
Query: 68 AEQLDRI 74
++LDR+
Sbjct: 414 RQELDRL 420
>gi|38787957 tensin like C1 domain containing phosphatase isoform 2
[Homo sapiens]
Length = 1409
Score = 32.7 bits (73), Expect = 0.43
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Query: 8 YSFFSPSPARKRHAPSPEPAVQGTGVAGVPEESGDAAAIPAKKAPAGQEEPGTPPSSPLS 67
Y+ P + APSPEP + V +SG ++ + + A E PG PP +
Sbjct: 483 YAQVQRPPRQTPPAPSPEPPPPP--MLSVSSDSGHSSTLTTEPAA---ESPGRPPPTAAE 537
Query: 68 AEQLDRI 74
++LDR+
Sbjct: 538 RQELDRL 544
>gi|38787941 tensin like C1 domain containing phosphatase isoform 1
[Homo sapiens]
Length = 1419
Score = 32.7 bits (73), Expect = 0.43
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Query: 8 YSFFSPSPARKRHAPSPEPAVQGTGVAGVPEESGDAAAIPAKKAPAGQEEPGTPPSSPLS 67
Y+ P + APSPEP + V +SG ++ + + A E PG PP +
Sbjct: 493 YAQVQRPPRQTPPAPSPEPPPPP--MLSVSSDSGHSSTLTTEPAA---ESPGRPPPTAAE 547
Query: 68 AEQLDRI 74
++LDR+
Sbjct: 548 RQELDRL 554
>gi|42475941 zinc finger protein 261 [Homo sapiens]
Length = 1370
Score = 32.7 bits (73), Expect = 0.43
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 7/69 (10%)
Query: 12 SPSPARKRHAPSPEPAVQGTGVAGVPEESGDAAAIPAKKAPAGQEEPGTPPSSPLSAEQL 71
S SP K PS + V+ + PEE+G+ IP K A PP P +
Sbjct: 772 SQSPESKPQTPS-QTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPPPPPPPATP--- 827
Query: 72 DRIQRNKAA 80
++NKAA
Sbjct: 828 ---RKNKAA 833
>gi|4827067 zinc finger protein 261 [Homo sapiens]
Length = 1370
Score = 32.7 bits (73), Expect = 0.43
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 7/69 (10%)
Query: 12 SPSPARKRHAPSPEPAVQGTGVAGVPEESGDAAAIPAKKAPAGQEEPGTPPSSPLSAEQL 71
S SP K PS + V+ + PEE+G+ IP K A PP P +
Sbjct: 772 SQSPESKPQTPS-QTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPPPPPPPATP--- 827
Query: 72 DRIQRNKAA 80
++NKAA
Sbjct: 828 ---RKNKAA 833
>gi|128485756 hexaribonucleotide binding protein 3 [Homo sapiens]
Length = 312
Score = 32.7 bits (73), Expect = 0.43
Identities = 26/100 (26%), Positives = 37/100 (37%), Gaps = 13/100 (13%)
Query: 22 PSPEPAVQGTGVAGVPEESGDAAAIPAKKAP--AGQEEPGTPPSSPLSAEQLDRIQRNKA 79
P P P +G VP E G PA+ P G E P + + Q D + +
Sbjct: 25 PPPHPTQDYSGQTPVPTEHGMTLYTPAQTHPEQPGSEASTQPIAGTQTVPQTDEAAQTDS 84
Query: 80 AAL-----------LRLAARNVPVGFGESWKKHLSGEFGK 108
L RL N+P F + + + G+FGK
Sbjct: 85 QPLHPSDPTEKQQPKRLHVSNIPFRFRDPDLRQMFGQFGK 124
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 32.7 bits (73), Expect = 0.43
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 6/62 (9%)
Query: 9 SFFSPSPARKRHAPSPEPAVQGTGVAGVPEESGDAAAIPAKKA-----PAGQEEPGTPPS 63
S FSP H P P T G +SG+ PA P +E+PGTPP
Sbjct: 395 SAFSPYQTPVAHFPPPPEEPTATAAFGA-RDSGEFRRAPAPPPLPPAEPLAKEKPGTPPG 453
Query: 64 SP 65
P
Sbjct: 454 PP 455
>gi|145312251 EPH receptor A6 isoform a [Homo sapiens]
Length = 1130
Score = 32.7 bits (73), Expect = 0.43
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 13 PSPARKRHAPSPEPAVQGTGVAGVPEESGDAAAIPAKKAPAGQEEPGTPPSSPLSAEQ 70
PSP R +P+P+ A A + G + +P + + PGTPP+ + E+
Sbjct: 4 PSPPAARSSPAPQAASSSEAAAPATGQPGPSCPVP---GTSRRGRPGTPPAGRVEEEE 58
>gi|134288906 tripartite motif-containing 67 [Homo sapiens]
Length = 783
Score = 32.7 bits (73), Expect = 0.43
Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 3/51 (5%)
Query: 130 PPHQVFTWTQMCDIKDVKVVILGQDPYHGPNQAHGLCFSVQRPVPPPPSLE 180
PP T + CD+ L P GP H L VQ P PPPP E
Sbjct: 215 PPEPAATLCEQCDVLYCSACQLKCHPSRGPFAKHRL---VQPPPPPPPPAE 262
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 32.3 bits (72), Expect = 0.56
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 12 SPSPARKRHAPSPEPAVQGTGVAGVPEESG--DAAAIPAKKAPAG-QEEPGTPPS 63
+P P + P P VAG+P S A PA++ PA + PGTPPS
Sbjct: 1266 TPPPVSPKPPPPPTAPKPVKAVAGLPSGSAGPSPAPSPARQPPAALAKPPGTPPS 1320
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 32.3 bits (72), Expect = 0.56
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Query: 13 PSPARKRHAPSPEPAVQGTGVAGVPEESGDAAAIPAKKAPAGQEEPGTPPSS 64
PSP P+P PA +G+ E D A + AP Q EPG P S
Sbjct: 1095 PSPMGDLSCPAPSPAPALDDFSGLGE---DTAPLDGIDAPGSQPEPGQTPGS 1143
Score = 32.0 bits (71), Expect = 0.73
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 7/67 (10%)
Query: 9 SFFSPSPARKRHAPSPEPAVQGTGVAGVPEE------SGDAAAIPAKKAPAGQEEPGTPP 62
S SP + +P PE + G PEE G+ + P PA EPG PP
Sbjct: 849 SHLSPELEKPPLSPRPEKPPEEPGQCPAPEELPLFPPPGEPSLSPLLGEPA-LSEPGEPP 907
Query: 63 SSPLSAE 69
SPL E
Sbjct: 908 LSPLPEE 914
>gi|83921602 solute carrier family 38, member 10 isoform a [Homo
sapiens]
Length = 1119
Score = 32.3 bits (72), Expect = 0.56
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Query: 17 RKRHAPSPEPAVQGTGVAGVPEESGDAAAIPAKKAPAGQEEPGTPPSSPLSAEQLDRIQR 76
+ + P P A TG + G +PA+K G PG PP P ++R
Sbjct: 625 KAKGGPPPGNAAGDTGQPAEDSDHGGKPPLPAEKPAPG---PGLPP-EPREQRDVERAGG 680
Query: 77 NKAAALLRLAAR 88
N+AA+ L A R
Sbjct: 681 NQAASQLEEAGR 692
Score = 28.5 bits (62), Expect = 8.0
Identities = 31/107 (28%), Positives = 43/107 (40%), Gaps = 15/107 (14%)
Query: 13 PSPARKRHAPSPEPAVQGT--GVAGVPEESGDAAAIPAKKAPAGQEEPGTPPSSPLSAEQ 70
P P +R PE G G A EE+GD P +K P +P P+ E
Sbjct: 541 PLPDSEREKQEPEQGEVGKRPGQAQALEEAGDLPEDP-QKVPEADGQPAVQPAK----ED 595
Query: 71 L---DRIQRNKAAALLRLAARNVPVGFGESWK-----KHLSGEFGKP 109
L DR + A+L + VG GE K + +G+ G+P
Sbjct: 596 LGPGDRGLHPRPQAVLSEQQNGLAVGGGEKAKGGPPPGNAAGDTGQP 642
>gi|71043876 undifferentiated embryonic cell transcription factor 1
[Homo sapiens]
Length = 341
Score = 32.3 bits (72), Expect = 0.56
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Query: 11 FSPSPARKRHA---PSPEPAVQGTGVAG-VPEESGDAAAIPAKKAPAGQEEPGTPPSSP 65
FSPSP + A P PA T +A +PE+ + P +E+P +PP P
Sbjct: 204 FSPSPPKSADASPAPGSPPAPAPTALATCIPEDRAPVRGPGSPPPPPAREDPDSPPGRP 262
>gi|164698460 mannosidase, endo-alpha-like isoform 3 [Homo
sapiens]
Length = 457
Score = 32.3 bits (72), Expect = 0.56
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 7 LYSFFSPSPARKRHAPSPEPAVQGTGVAGVP-EESGDAAAIPAKKAPAGQEEPGTPPSSP 65
L++F + R AP PA+ G G+ P E + A PA +APA P PP P
Sbjct: 17 LFAFGTLMGLRTLKAPDGLPAL-GPGLELAPFERRPEGAPAPAARAPAAPAAPPPPPPPP 75
Query: 66 LSAE 69
+A+
Sbjct: 76 RTAD 79
>gi|72534766 mannosidase, endo-alpha-like isoform 1 [Homo sapiens]
Length = 250
Score = 32.3 bits (72), Expect = 0.56
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 7 LYSFFSPSPARKRHAPSPEPAVQGTGVAGVP-EESGDAAAIPAKKAPAGQEEPGTPPSSP 65
L++F + R AP PA+ G G+ P E + A PA +APA P PP P
Sbjct: 17 LFAFGTLMGLRTLKAPDGLPAL-GPGLELAPFERRPEGAPAPAARAPAAPAAPPPPPPPP 75
Query: 66 LSAE 69
+A+
Sbjct: 76 RTAD 79
>gi|169164209 PREDICTED: hypothetical protein [Homo sapiens]
Length = 179
Score = 32.0 bits (71), Expect = 0.73
Identities = 32/106 (30%), Positives = 45/106 (42%), Gaps = 14/106 (13%)
Query: 13 PSPARKRHAPSPEPAVQGTGVAGVPEESGDAAAIPAKKAPAGQEEPGTPP---SSPLSAE 69
PSPAR + SP P+ + G P + ++ P + A + EP PP S P +A
Sbjct: 36 PSPARPAPSASPSPS-RAAGPFLPPSHASTSSRSPPPR--ARRTEPAVPPSCGSGPGAAG 92
Query: 70 Q----LDRIQRNKAAALLRLAARNVPVGFG----ESWKKHLSGEFG 107
L R QR A+ R A V G + + HL G+ G
Sbjct: 93 ALRMGLGRTQRAARVAVSRALAGTVAAAAGLGARRARRLHLRGQIG 138
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,519,545
Number of Sequences: 37866
Number of extensions: 858585
Number of successful extensions: 4707
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 133
Number of HSP's that attempted gapping in prelim test: 4437
Number of HSP's gapped (non-prelim): 396
length of query: 313
length of database: 18,247,518
effective HSP length: 102
effective length of query: 211
effective length of database: 14,385,186
effective search space: 3035274246
effective search space used: 3035274246
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.