Guide to the Human Genome
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Name: UNG Sequence: fasta or formatted (304aa) NCBI GI: 6224979
Description:

uracil-DNA glycosylase isoform UNG1 precursor

Referenced in:

DNases, Recombination, and DNA Repair

Other entries for this name:
alt prot [313aa] uracil-DNA glycosylase isoform UNG2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         20           3
 C cysteine            1.6          5           1
 D aspartate           3.6         11           1
 E glutamate           4.6         14           2
 F phenylalanine       4.3         13           2
 G glycine             9.2         28           1
 H histidine           4.6         14           2
 I isoleucine          3.0          9           1
 K lysine              7.6         23           2
 L leucine            10.9         33           3
 M methionine          1.0          3           1
 N asparagine          3.3         10           1
 P proline             8.2         25           4
 Q glutamine           5.6         17           1
 R arginine            4.9         15           1
 S serine              6.2         19           2
 T threonine           3.3         10           1
 V valine              6.6         20           2
 W tryptophan          2.6          8           1
 Y tyrosine            2.3          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   uracil-DNA glycosylase isoform UNG1 precursor 
UNG                   0.877   uracil-DNA glycosylase isoform UNG2 
TRIM67                0.013   tripartite motif-containing 67 
SMTNL1                0.011   smoothelin-like 1 
LOC100293848          0.008   PREDICTED: hypothetical protein 
LOC100290829          0.008   PREDICTED: hypothetical protein XP_002346522 
LOC100288535          0.008   PREDICTED: hypothetical protein XP_002342360 
FBLIM1                0.008   filamin-binding LIM protein-1 isoform b 
FBLIM1                0.008   filamin-binding LIM protein-1 isoform a 
ENGASE                0.008   endo-beta-N-acetylglucosaminidase 
BAI1                  0.008   brain-specific angiogenesis inhibitor 1 precursor [...
SMARCA2               0.006   SWI/SNF-related matrix-associated actin-dependent re...
SMARCA2               0.006   SWI/SNF-related matrix-associated actin-dependent re...
ZNF185                0.006   zinc finger protein 185 
GRID2IP               0.006   glutamate receptor, ionotropic, delta 2 (Grid2) int...
TBC1D9B               0.006   TBC1 domain family, member 9B (with GRAM domain) iso...
TBC1D9B               0.006   TBC1 domain family, member 9B (with GRAM domain) iso...
SEMA4G                0.006   semaphorin 4G 
ZNF498                0.006   zinc finger and SCAN domain containing 25 
ANKRD9                0.006   ankyrin repeat domain 9 
CUL4B                 0.005   cullin 4B isoform 2 
CUL4B                 0.005   cullin 4B isoform 1 
LOC100287737          0.005   PREDICTED: hypothetical protein XP_002343203 
ADAMTS17              0.005   ADAM metallopeptidase with thrombospondin type 1 mo...
FLJ43860              0.005   hypothetical protein LOC389690 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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