Guide to the Human Genome
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Name: RNF212 Sequence: fasta or formatted (297aa) NCBI GI: 196259799
Description:

ring finger protein 212 isoform a

Referenced in:

Ring Finger Proteins

Other entries for this name:
alt prot [232aa] ring finger protein 212 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         17           2
 C cysteine            5.7         17           1
 D aspartate           3.0          9           1
 E glutamate           5.4         16           2
 F phenylalanine       6.1         18           2
 G glycine             4.0         12           1
 H histidine           3.0          9           1
 I isoleucine          5.1         15           1
 K lysine              6.1         18           2
 L leucine             9.8         29           4
 M methionine          2.0          6           1
 N asparagine          1.7          5           1
 P proline             7.7         23           2
 Q glutamine           4.7         14           2
 R arginine            6.4         19           1
 S serine             11.4         34           2
 T threonine           5.1         15           1
 V valine              4.7         14           2
 W tryptophan          1.0          3           1
 Y tyrosine            1.3          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ring finger protein 212 isoform a 
RNF212                0.627   ring finger protein 212 isoform b 
TRIM40                0.029   tripartite motif-containing 40 
CHFR                  0.024   checkpoint with forkhead and ring finger domains is...
CHFR                  0.024   checkpoint with forkhead and ring finger domains is...
CHFR                  0.024   checkpoint with forkhead and ring finger domains is...
CHFR                  0.024   checkpoint with forkhead and ring finger domains is...
FLJ44082              0.020   hypothetical protein LOC389762 
FLJ43859              0.020   hypothetical protein LOC389761 
CHFR                  0.019   checkpoint with forkhead and ring finger domains is...
MID1                  0.014   midline 1 
MID1                  0.014   midline 1 
MID1                  0.014   midline 1 
BCAR3                 0.014   breast cancer antiestrogen resistance 3 
FLJ46321              0.014   hypothetical protein LOC389763 
MLL2                  0.014   myeloid/lymphoid or mixed-lineage leukemia 2 
RNF14                 0.014   ring finger protein 14 isoform 1 
RNF14                 0.014   ring finger protein 14 isoform 1 
RNF14                 0.014   ring finger protein 14 isoform 1 
RNF14                 0.014   ring finger protein 14 isoform 2 
RNF14                 0.014   ring finger protein 14 isoform 1 
UBOX5                 0.012   U-box domain containing 5 isoform a 
TRIML1                0.012   tripartite motif family-like 1 
UBOX5                 0.012   U-box domain containing 5 isoform b 
MID2                  0.012   midline 2 isoform 2 
MID2                  0.012   midline 2 isoform 1 
PML                   0.012   promyelocytic leukemia protein isoform 11 
PML                   0.012   promyelocytic leukemia protein isoform 2 
PML                   0.012   promyelocytic leukemia protein isoform 9 
PML                   0.012   promyelocytic leukemia protein isoform 8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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