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Search of human proteins with 19526475
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|19526475 outer dense fiber of sperm tails 3 [Homo sapiens]
(254 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|19526475 outer dense fiber of sperm tails 3 [Homo sapiens] 532 e-151
gi|116292180 outer dense fiber of sperm tails 3B [Homo sapiens] 232 3e-61
gi|32698984 outer dense fiber of sperm tails 3-like 2 [Homo sapi... 145 3e-35
gi|28557703 outer dense fiber of sperm tails 3-like 1 [Homo sapi... 139 2e-33
gi|42475941 zinc finger protein 261 [Homo sapiens] 35 0.082
gi|4827067 zinc finger protein 261 [Homo sapiens] 35 0.082
gi|56549125 dynamin 2 isoform 4 [Homo sapiens] 33 0.18
gi|56549123 dynamin 2 isoform 2 [Homo sapiens] 33 0.18
gi|56549121 dynamin 2 isoform 1 [Homo sapiens] 33 0.18
gi|56549119 dynamin 2 isoform 3 [Homo sapiens] 33 0.18
gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo sap... 33 0.18
gi|124248531 hypothetical protein LOC441476 [Homo sapiens] 32 0.70
gi|4885373 histone cluster 1, H1a [Homo sapiens] 31 0.91
gi|42821110 hypothetical protein LOC340602 [Homo sapiens] 31 1.2
gi|112382257 InaD-like [Homo sapiens] 30 2.0
gi|30794260 hypothetical protein LOC90529 [Homo sapiens] 30 2.0
gi|122056614 LIM domain binding 3 isoform 2 [Homo sapiens] 30 2.7
gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens] 30 2.7
gi|155969705 chloride channel Kb [Homo sapiens] 30 2.7
gi|54792090 hypothetical protein LOC23351 [Homo sapiens] 30 2.7
gi|83367077 mucin 16 [Homo sapiens] 29 4.5
gi|239753565 PREDICTED: hypothetical protein [Homo sapiens] 29 4.5
gi|239748093 PREDICTED: hypothetical protein XP_002346551 [Homo ... 29 4.5
gi|239741989 PREDICTED: hypothetical protein XP_002342387 [Homo ... 29 4.5
gi|74027251 tripartite motif-containing 33 protein isoform beta ... 29 4.5
gi|74027249 tripartite motif-containing 33 protein isoform alpha... 29 4.5
gi|197304786 IQ motif and Sec7 domain 1 isoform a [Homo sapiens] 29 4.5
gi|89886221 hypothetical protein LOC643923 [Homo sapiens] 29 4.5
gi|104487002 protein tyrosine phosphatase, receptor type, D isof... 28 5.9
gi|42544243 dynamin 3 isoform a [Homo sapiens] 28 5.9
>gi|19526475 outer dense fiber of sperm tails 3 [Homo sapiens]
Length = 254
Score = 532 bits (1371), Expect = e-151
Identities = 254/254 (100%), Positives = 254/254 (100%)
Query: 1 MTEEVWMGTWRPHRPRGPIMALYSSPGPKYLIPPTTGFMKHTPTKLRAPAYSFRGAPMLL 60
MTEEVWMGTWRPHRPRGPIMALYSSPGPKYLIPPTTGFMKHTPTKLRAPAYSFRGAPMLL
Sbjct: 1 MTEEVWMGTWRPHRPRGPIMALYSSPGPKYLIPPTTGFMKHTPTKLRAPAYSFRGAPMLL 60
Query: 61 AENCSPGPRYNVNPKILRTGKDLGPAYSILGRYQTKTMLTPGPGDYFPEKSTKYVFDSAP 120
AENCSPGPRYNVNPKILRTGKDLGPAYSILGRYQTKTMLTPGPGDYFPEKSTKYVFDSAP
Sbjct: 61 AENCSPGPRYNVNPKILRTGKDLGPAYSILGRYQTKTMLTPGPGDYFPEKSTKYVFDSAP 120
Query: 121 SHSISARTKAFRVDSTPGPAAYMLPMVMGPNTVGKASQPSFSIKGRSKLGGFSDDLHKTP 180
SHSISARTKAFRVDSTPGPAAYMLPMVMGPNTVGKASQPSFSIKGRSKLGGFSDDLHKTP
Sbjct: 121 SHSISARTKAFRVDSTPGPAAYMLPMVMGPNTVGKASQPSFSIKGRSKLGGFSDDLHKTP 180
Query: 181 GPAAYRQTDVRVTKFKAPQYTMAARVEPPGDKTLKPGPGAHSPEKVTLTKPCAPVVTFGI 240
GPAAYRQTDVRVTKFKAPQYTMAARVEPPGDKTLKPGPGAHSPEKVTLTKPCAPVVTFGI
Sbjct: 181 GPAAYRQTDVRVTKFKAPQYTMAARVEPPGDKTLKPGPGAHSPEKVTLTKPCAPVVTFGI 240
Query: 241 KHSDYMTPLLVDVE 254
KHSDYMTPLLVDVE
Sbjct: 241 KHSDYMTPLLVDVE 254
>gi|116292180 outer dense fiber of sperm tails 3B [Homo sapiens]
Length = 253
Score = 232 bits (591), Expect = 3e-61
Identities = 117/256 (45%), Positives = 157/256 (61%), Gaps = 6/256 (2%)
Query: 1 MTEEVWMGTWRPHRPRGPIMALYSSPGPKYLIPPTTGFMKHTPTKLRAPAYSFRGAPMLL 60
M + W+G WRPHRPRGPI A Y PGPKY +PP TG+ H P++ RAPA++F
Sbjct: 1 MGSDAWVGLWRPHRPRGPIAAHYGGPGPKYKLPPNTGYALHDPSRPRAPAFTFGARFPTQ 60
Query: 61 AENCSPGPRYNVNPKILRTGKDLGPAYSILGR-YQTKTMLTPGPGDYFPEKSTKYVFDSA 119
C PGP + V ++ G D PAYSI GR ++ LTPGPG YFPE++ + SA
Sbjct: 61 QTTCGPGPGHLVPARMTVRGTDGAPAYSIYGRPRRSAPFLTPGPGRYFPERAGNATYPSA 120
Query: 120 PSHSISARTKAFRVD-STPGPAAYMLPMVMGPNTVGKASQPSFSIKGRSKLGGFSDDLHK 178
P H+I+ R + + +PGPAAY +P ++GP +GK S P+ SI GR G F +DL K
Sbjct: 121 PRHTIAPRNWGVQAEQQSPGPAAYTVPSLLGPRVIGKVSAPTCSIYGRRAAGSFFEDLSK 180
Query: 179 TPGPAAYRQTDVRVTKFKAPQYTMAARVEPPGDKTLKPGPGAHSPEKVTLTKPCAPVVTF 238
TPGP AY+ V K +APQ+T+ AR P D T KPGP A++ ++ KP +F
Sbjct: 181 TPGPCAYQVVSPGVYKSRAPQFTILARTSLPQDNTRKPGPAAYNVDQ--HRKPRG--WSF 236
Query: 239 GIKHSDYMTPLLVDVE 254
GI+HSDY+ PL+ D +
Sbjct: 237 GIRHSDYLAPLVTDAD 252
>gi|32698984 outer dense fiber of sperm tails 3-like 2 [Homo
sapiens]
Length = 289
Score = 145 bits (367), Expect = 3e-35
Identities = 83/223 (37%), Positives = 119/223 (53%), Gaps = 4/223 (1%)
Query: 24 SSPGPKYLIPPTTGFMKHTPTKLRAPAYSFRGAPMLLA-ENCSPGPRYNVNPKILRTGKD 82
S PG Y++P T GF+ H T++ +PAYS P ++ SPGP Y ++PK+ R G+
Sbjct: 44 SGPG-LYVLPSTVGFINHDCTRVASPAYSLVRRPSEAPPQDTSPGPIYFLDPKVTRFGRS 102
Query: 83 LGPAYSILGRYQTK-TMLTPGPGDYFPEKSTKYVFDSAPSHSISARTKAFRVD-STPGPA 140
PAYS+ GR +++ +TPGPG Y PEK + P+ ++ R +D S P P
Sbjct: 103 CTPAYSMQGRAKSRGPEVTPGPGAYSPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAPN 162
Query: 141 AYMLPMVMGPNTVGKASQPSFSIKGRSKLGGFSDDLHKTPGPAAYRQTDVRVTKFKAPQY 200
AY +P + G K S PS+++ GR+ D + PGP Y D + + P +
Sbjct: 163 AYTMPPLWGSQIFTKPSSPSYTVVGRTPPARPPQDPAEIPGPGQYDSPDANTYRQRLPAF 222
Query: 201 TMAARVEPPGDKTLKPGPGAHSPEKVTLTKPCAPVVTFGIKHS 243
TM R P PGPGAH PE+VT+ K AP + GI+HS
Sbjct: 223 TMLGRPRAPRPLEETPGPGAHCPEQVTVNKARAPAFSMGIRHS 265
>gi|28557703 outer dense fiber of sperm tails 3-like 1 [Homo
sapiens]
Length = 274
Score = 139 bits (351), Expect = 2e-33
Identities = 82/239 (34%), Positives = 125/239 (52%), Gaps = 4/239 (1%)
Query: 19 IMALYSSPGP-KYLIPPTTGFMKHTPTKLRAPAYSF--RGAPMLLAENCSPGPRYNVNPK 75
IMA PGP KYL P TG++ H + +APAY+ R + + + SPGP Y ++PK
Sbjct: 34 IMAKIKGPGPAKYLRPSCTGYIDHDISMFKAPAYTLHSRHSEKRMVCHSSPGPCYLLDPK 93
Query: 76 ILRTGKDLGPAYSILGRYQTKTML-TPGPGDYFPEKSTKYVFDSAPSHSISARTKAFRVD 134
I R G P + R + T Y+ EK AP ++ R +D
Sbjct: 94 ITRFGMSSCPQVPMEERISNLRLNPTLASCQYYFEKIHPPGERRAPQYTFGYRRPYRVMD 153
Query: 135 STPGPAAYMLPMVMGPNTVGKASQPSFSIKGRSKLGGFSDDLHKTPGPAAYRQTDVRVTK 194
P P Y +P+++GPNT + P +S+ R K + +D+ PGP Y + + + +
Sbjct: 154 LNPAPNQYQMPLLLGPNTPVSRAAPCYSLASRDKNWFYKEDVAGGPGPTTYARPEPSIYQ 213
Query: 195 FKAPQYTMAARVEPPGDKTLKPGPGAHSPEKVTLTKPCAPVVTFGIKHSDYMTPLLVDV 253
++P Y+MA R P D T +PGPG+H ++VT+ KP P T GIKHS ++ PL++D+
Sbjct: 214 NRSPTYSMAKRFAYPLDLTPRPGPGSHEVQQVTVHKPHIPAFTMGIKHSLHLCPLVIDI 272
>gi|42475941 zinc finger protein 261 [Homo sapiens]
Length = 1370
Score = 34.7 bits (78), Expect = 0.082
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 13/103 (12%)
Query: 124 ISARTKAFRVDSTPGPAAYMLPMVMGPNTVGKASQPSFSIKGRSKLGGFSDDLHKTPGPA 183
+ ++T R + PGP+ + + G P + G ++L G L+K P P
Sbjct: 35 LESQTAPTRGWAPPGPSPSSGALDLLDTPAGLEKDPGV-LDGATELLGLGGLLYKAPSPP 93
Query: 184 AYRQTDVRVTKFKAPQYTMAARVEPPGDKTLKPGPGAHSPEKV 226
P+ T+A GD+TL+PGPG +PE V
Sbjct: 94 EVDH---------GPEGTLAWDA---GDQTLEPGPGGQTPEVV 124
>gi|4827067 zinc finger protein 261 [Homo sapiens]
Length = 1370
Score = 34.7 bits (78), Expect = 0.082
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 13/103 (12%)
Query: 124 ISARTKAFRVDSTPGPAAYMLPMVMGPNTVGKASQPSFSIKGRSKLGGFSDDLHKTPGPA 183
+ ++T R + PGP+ + + G P + G ++L G L+K P P
Sbjct: 35 LESQTAPTRGWAPPGPSPSSGALDLLDTPAGLEKDPGV-LDGATELLGLGGLLYKAPSPP 93
Query: 184 AYRQTDVRVTKFKAPQYTMAARVEPPGDKTLKPGPGAHSPEKV 226
P+ T+A GD+TL+PGPG +PE V
Sbjct: 94 EVDH---------GPEGTLAWDA---GDQTLEPGPGGQTPEVV 124
>gi|56549125 dynamin 2 isoform 4 [Homo sapiens]
Length = 866
Score = 33.5 bits (75), Expect = 0.18
Identities = 53/210 (25%), Positives = 82/210 (39%), Gaps = 32/210 (15%)
Query: 31 LIPPTTGFMKHTPTKLRAPAYSFRGAPMLLAENCSPGPRYNVNPKILRTGKDLGPAYSIL 90
+I T F+ H +L A YS L+ E+ R + +LR L A +I+
Sbjct: 679 MINNTKAFIHH---ELLAYLYSSADQSSLMEESADQAQRRD---DMLRMYHALKEALNII 732
Query: 91 GRYQTKTMLTPGPGDYFPEKSTKYVFDSAPSHSISARTKAFRVDSTPGPAAYMLPMVMGP 150
G T T+ TP P P ++ SA SHS + + + PG P V GP
Sbjct: 733 GDISTSTVSTPVP----PPVDDTWL-QSASSHSPTPQRRPVSSIHPPGRP----PAVRGP 783
Query: 151 NTVGKASQPSFSIKGRSKLGGFSDDLHKTPGP-AAYRQTDVRVTKFKAPQYTMAARVE-- 207
P + + + + PGP + + +D+ F AP + V
Sbjct: 784 T----PGPPLIPVPVGAAASFSAPPIPSRPGPQSVFANSDL----FPAPPQIPSRPVRIP 835
Query: 208 ---PPGDKTLKPGPGAHSPEKVTLTKPCAP 234
PPG + +P P A P + T+ +P P
Sbjct: 836 PGIPPGVPSRRP-PAA--PSRPTIIRPAEP 862
>gi|56549123 dynamin 2 isoform 2 [Homo sapiens]
Length = 870
Score = 33.5 bits (75), Expect = 0.18
Identities = 53/210 (25%), Positives = 82/210 (39%), Gaps = 32/210 (15%)
Query: 31 LIPPTTGFMKHTPTKLRAPAYSFRGAPMLLAENCSPGPRYNVNPKILRTGKDLGPAYSIL 90
+I T F+ H +L A YS L+ E+ R + +LR L A +I+
Sbjct: 683 MINNTKAFIHH---ELLAYLYSSADQSSLMEESADQAQRRD---DMLRMYHALKEALNII 736
Query: 91 GRYQTKTMLTPGPGDYFPEKSTKYVFDSAPSHSISARTKAFRVDSTPGPAAYMLPMVMGP 150
G T T+ TP P P ++ SA SHS + + + PG P V GP
Sbjct: 737 GDISTSTVSTPVP----PPVDDTWL-QSASSHSPTPQRRPVSSIHPPGRP----PAVRGP 787
Query: 151 NTVGKASQPSFSIKGRSKLGGFSDDLHKTPGP-AAYRQTDVRVTKFKAPQYTMAARVE-- 207
P + + + + PGP + + +D+ F AP + V
Sbjct: 788 T----PGPPLIPVPVGAAASFSAPPIPSRPGPQSVFANSDL----FPAPPQIPSRPVRIP 839
Query: 208 ---PPGDKTLKPGPGAHSPEKVTLTKPCAP 234
PPG + +P P A P + T+ +P P
Sbjct: 840 PGIPPGVPSRRP-PAA--PSRPTIIRPAEP 866
>gi|56549121 dynamin 2 isoform 1 [Homo sapiens]
Length = 870
Score = 33.5 bits (75), Expect = 0.18
Identities = 53/210 (25%), Positives = 82/210 (39%), Gaps = 32/210 (15%)
Query: 31 LIPPTTGFMKHTPTKLRAPAYSFRGAPMLLAENCSPGPRYNVNPKILRTGKDLGPAYSIL 90
+I T F+ H +L A YS L+ E+ R + +LR L A +I+
Sbjct: 683 MINNTKAFIHH---ELLAYLYSSADQSSLMEESADQAQRRD---DMLRMYHALKEALNII 736
Query: 91 GRYQTKTMLTPGPGDYFPEKSTKYVFDSAPSHSISARTKAFRVDSTPGPAAYMLPMVMGP 150
G T T+ TP P P ++ SA SHS + + + PG P V GP
Sbjct: 737 GDISTSTVSTPVP----PPVDDTWL-QSASSHSPTPQRRPVSSIHPPGRP----PAVRGP 787
Query: 151 NTVGKASQPSFSIKGRSKLGGFSDDLHKTPGP-AAYRQTDVRVTKFKAPQYTMAARVE-- 207
P + + + + PGP + + +D+ F AP + V
Sbjct: 788 T----PGPPLIPVPVGAAASFSAPPIPSRPGPQSVFANSDL----FPAPPQIPSRPVRIP 839
Query: 208 ---PPGDKTLKPGPGAHSPEKVTLTKPCAP 234
PPG + +P P A P + T+ +P P
Sbjct: 840 PGIPPGVPSRRP-PAA--PSRPTIIRPAEP 866
>gi|56549119 dynamin 2 isoform 3 [Homo sapiens]
Length = 866
Score = 33.5 bits (75), Expect = 0.18
Identities = 53/210 (25%), Positives = 82/210 (39%), Gaps = 32/210 (15%)
Query: 31 LIPPTTGFMKHTPTKLRAPAYSFRGAPMLLAENCSPGPRYNVNPKILRTGKDLGPAYSIL 90
+I T F+ H +L A YS L+ E+ R + +LR L A +I+
Sbjct: 679 MINNTKAFIHH---ELLAYLYSSADQSSLMEESADQAQRRD---DMLRMYHALKEALNII 732
Query: 91 GRYQTKTMLTPGPGDYFPEKSTKYVFDSAPSHSISARTKAFRVDSTPGPAAYMLPMVMGP 150
G T T+ TP P P ++ SA SHS + + + PG P V GP
Sbjct: 733 GDISTSTVSTPVP----PPVDDTWL-QSASSHSPTPQRRPVSSIHPPGRP----PAVRGP 783
Query: 151 NTVGKASQPSFSIKGRSKLGGFSDDLHKTPGP-AAYRQTDVRVTKFKAPQYTMAARVE-- 207
P + + + + PGP + + +D+ F AP + V
Sbjct: 784 T----PGPPLIPVPVGAAASFSAPPIPSRPGPQSVFANSDL----FPAPPQIPSRPVRIP 835
Query: 208 ---PPGDKTLKPGPGAHSPEKVTLTKPCAP 234
PPG + +P P A P + T+ +P P
Sbjct: 836 PGIPPGVPSRRP-PAA--PSRPTIIRPAEP 862
>gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo sapiens]
Length = 1747
Score = 33.5 bits (75), Expect = 0.18
Identities = 46/194 (23%), Positives = 64/194 (32%), Gaps = 27/194 (13%)
Query: 33 PPTTGFMKHTPTKLRAPAYSFRGAPMLLAENCSPGPRYNVNPKILRTGKDLGPAYSILGR 92
PP T P AP Y G P + PG Y+ + G + G
Sbjct: 832 PPQTA-----PPPPPAPYYFDSGPPPAFSPPPPPGRAYDTVRSSFKPGLEARLGAGAAGL 886
Query: 93 YQTKTMLTPGPGDYFPEKSTKYVFDSAPSHSISARTKAFRVDSTP--GPAAYMLPMVMGP 150
Y+ L P P +PE+ + AR+ DS P G A P P
Sbjct: 887 YEPGAALGPLP---YPERQKR------------ARSMIILQDSAPESGDAPRPPPAATPP 931
Query: 151 NTVGKASQPSFSIKGRSKLGGFSDDLHKTPGPAAYRQTDVRVTKFKAPQYTMAARVEPPG 210
+ +P + LG FS L P + V+ + + Q A V PG
Sbjct: 932 ERPKRRPRPPGPDSPYANLGAFSASLFAPSKPQRRKSPLVKQLQVEDAQERAALAVGSPG 991
Query: 211 DKTLKPGPGAHSPE 224
PG G+ + E
Sbjct: 992 -----PGGGSFARE 1000
>gi|124248531 hypothetical protein LOC441476 [Homo sapiens]
Length = 308
Score = 31.6 bits (70), Expect = 0.70
Identities = 28/97 (28%), Positives = 37/97 (38%), Gaps = 5/97 (5%)
Query: 49 PAYSFRGAPMLLAENCSPGPRYNVNPKILRTGKDLGPAYSILGRYQTKTMLTPGPGDYFP 108
PA+SFRG A G + P G + P + Q PGP Y
Sbjct: 180 PAFSFRGCHS--ASKTPEGHTHLGLPGARGLGLRVQPQSLLQASLQAPGKRCPGPNTYNI 237
Query: 109 EKSTKYVFDSAPSHSIS---ARTKAFRVDSTPGPAAY 142
++ +P+ S+S A T TPGPAAY
Sbjct: 238 LPGSRLQSPRSPAFSMSRSPAFTSWLSTSRTPGPAAY 274
>gi|4885373 histone cluster 1, H1a [Homo sapiens]
Length = 215
Score = 31.2 bits (69), Expect = 0.91
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Query: 166 RSKLGGFSDDLHKTPGPAAYRQTDVRVTKFKAPQYTMAARVEPPGDKTLKPGPGAHSPEK 225
++K G S L K G A +++ K K P T + P KT+KP A SP K
Sbjct: 129 KTKATGASKKLKKATG--ASKKSVKTPKKAKKPAATRKSSKNPKKPKTVKPKKVAKSPAK 186
Query: 226 VTLTKPCA 233
KP A
Sbjct: 187 AKAVKPKA 194
>gi|42821110 hypothetical protein LOC340602 [Homo sapiens]
Length = 503
Score = 30.8 bits (68), Expect = 1.2
Identities = 28/90 (31%), Positives = 36/90 (40%), Gaps = 12/90 (13%)
Query: 100 TPGPGDYFPEKST-----KYVFDSAPSHSISARTKAFRVDSTPGPAAYMLPMVMGPNTVG 154
T PG FP ++T + +SAP + R S PGPA GP G
Sbjct: 239 TAQPGPAFPHRATHLDPARLSPESAPGPARRGRA------SVPGPARRGCDSAPGPARRG 292
Query: 155 KASQPSFSIKGR-SKLGGFSDDLHKTPGPA 183
+ S P + +GR S G PGPA
Sbjct: 293 RDSAPVSAPRGRDSAPGSARRGRDSAPGPA 322
>gi|112382257 InaD-like [Homo sapiens]
Length = 1801
Score = 30.0 bits (66), Expect = 2.0
Identities = 23/75 (30%), Positives = 31/75 (41%)
Query: 100 TPGPGDYFPEKSTKYVFDSAPSHSISARTKAFRVDSTPGPAAYMLPMVMGPNTVGKASQP 159
TP P T+++ D+ PS S ART P Y VM N V ++
Sbjct: 898 TPVPSVNELHFGTQWLHDNEPSESQEARTGRTVYSQEAQPYGYCPENVMKENFVMESLPS 957
Query: 160 SFSIKGRSKLGGFSD 174
S +G S+ G F D
Sbjct: 958 VPSTEGNSQQGRFDD 972
>gi|30794260 hypothetical protein LOC90529 [Homo sapiens]
Length = 287
Score = 30.0 bits (66), Expect = 2.0
Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 20/138 (14%)
Query: 61 AENCSPGPRYNVNPKILRTGKDLGPAYSILGRYQTKT----MLT---PGPGDYFPEKSTK 113
A+ P Y++N +++ + +++ +++KT LT PGPG Y P TK
Sbjct: 137 ADKGPPPGHYDINESLVKQSPN-----TLMSCFKSKTNRGLKLTSTGPGPGYYNPSDCTK 191
Query: 114 Y----VFDSAPSHSISARTKAFRVDST-PGPAAYMLPMVMGPNTVGKASQPSFSIKGRSK 168
+F P + SA+ PGP Y + +GP K S S +
Sbjct: 192 VPKKTLFPKNPILNFSAQPSPLPPKPPFPGPGQYEIVDYLGPR---KHFISSASFVSNTS 248
Query: 169 LGGFSDDLHKTPGPAAYR 186
+ PGPA Y+
Sbjct: 249 RWTAAPPQPGLPGPATYK 266
>gi|122056614 LIM domain binding 3 isoform 2 [Homo sapiens]
Length = 617
Score = 29.6 bits (65), Expect = 2.7
Identities = 23/74 (31%), Positives = 26/74 (35%), Gaps = 5/74 (6%)
Query: 18 PIMALYSSPGPKYLIPPTTGFMKHTPTKLRAPAYSFRGAPMLL-----AENCSPGPRYNV 72
P SPG Y P T T APAY+ P A SP P YN
Sbjct: 302 PASTYSPSPGANYSPTPYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAPAYTPSPAPNYNP 361
Query: 73 NPKILRTGKDLGPA 86
P + +G PA
Sbjct: 362 APSVAYSGGPAEPA 375
>gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens]
Length = 727
Score = 29.6 bits (65), Expect = 2.7
Identities = 23/74 (31%), Positives = 26/74 (35%), Gaps = 5/74 (6%)
Query: 18 PIMALYSSPGPKYLIPPTTGFMKHTPTKLRAPAYSFRGAPMLL-----AENCSPGPRYNV 72
P SPG Y P T T APAY+ P A SP P YN
Sbjct: 412 PASTYSPSPGANYSPTPYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAPAYTPSPAPNYNP 471
Query: 73 NPKILRTGKDLGPA 86
P + +G PA
Sbjct: 472 APSVAYSGGPAEPA 485
>gi|155969705 chloride channel Kb [Homo sapiens]
Length = 687
Score = 29.6 bits (65), Expect = 2.7
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 116 FDSAPSHSISARTKAFRVDSTPGPAAYMLPMVMGPNTVGKASQPSF 161
F A +H+IS AF V A +L V+ N + ++ QPSF
Sbjct: 474 FSGAVTHTISTALLAFEVTGQIVHALPVLMAVLAANAIAQSCQPSF 519
>gi|54792090 hypothetical protein LOC23351 [Homo sapiens]
Length = 678
Score = 29.6 bits (65), Expect = 2.7
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 7/90 (7%)
Query: 102 GPGDYFPEKSTKYVFDSAPSHSISARTKAFRVDSTPGPAAYMLPMVMGPNTVGKASQPSF 161
GPGD + Y + R + PG A+ + + P +VG ++ S
Sbjct: 241 GPGDCRGARGDTYAVEKEGGKQGGPREMDWGWKELPGEEAWEREVALRPQSVGGGARESA 300
Query: 162 SIKGRS------KLGGFSDDLHKTPGPAAY 185
+KG++ LGG +H+ P P A+
Sbjct: 301 PLKGKALGKEEIALGGGGFCVHREP-PGAH 329
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 28.9 bits (63), Expect = 4.5
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 16/89 (17%)
Query: 85 PAYSILGRYQTKTMLTPGPG----------DYFPEKSTKYVFDSAPSHSIS--ARTKAFR 132
PA+S R QTK+ L+ PG EKST V S P+ + + +RT+A
Sbjct: 9270 PAFSDTSRIQTKSKLSLTPGLMETSISEETSSATEKST--VLSSVPTGATTEVSRTEAIS 9327
Query: 133 VDST--PGPAAYMLPMVMGPNTVGKASQP 159
T PGPA + T+ + S P
Sbjct: 9328 SSRTSIPGPAQSTMSSDTSMETITRISTP 9356
>gi|239753565 PREDICTED: hypothetical protein [Homo sapiens]
Length = 135
Score = 28.9 bits (63), Expect = 4.5
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 4 EVWMGTWRPHRP-RGPIMALYSSPGPKYLIPPTTG 37
++W GTW RP RGP + L GP + P G
Sbjct: 44 DLWAGTWLTLRPRRGPWLTLRPRRGPWLTLRPRRG 78
>gi|239748093 PREDICTED: hypothetical protein XP_002346551 [Homo
sapiens]
Length = 135
Score = 28.9 bits (63), Expect = 4.5
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 4 EVWMGTWRPHRP-RGPIMALYSSPGPKYLIPPTTG 37
++W GTW RP RGP + L GP + P G
Sbjct: 44 DLWAGTWLTLRPRRGPWLTLRPRRGPWLTLRPRRG 78
>gi|239741989 PREDICTED: hypothetical protein XP_002342387 [Homo
sapiens]
Length = 135
Score = 28.9 bits (63), Expect = 4.5
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 4 EVWMGTWRPHRP-RGPIMALYSSPGPKYLIPPTTG 37
++W GTW RP RGP + L GP + P G
Sbjct: 44 DLWAGTWLTLRPRRGPWLTLRPRRGPWLTLRPRRG 78
>gi|74027251 tripartite motif-containing 33 protein isoform beta
[Homo sapiens]
Length = 1110
Score = 28.9 bits (63), Expect = 4.5
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 13 HRPRGPIMALYSSPGPKYLIPPTTGFMKHTPTKLRAPAYSFRGA 56
H P P + SPGP L P ++G + ++ T +R P+ S G+
Sbjct: 708 HLPPQPTSTMNPSPGPSALSPGSSG-LSNSHTPVRPPSTSSTGS 750
>gi|74027249 tripartite motif-containing 33 protein isoform alpha
[Homo sapiens]
Length = 1127
Score = 28.9 bits (63), Expect = 4.5
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 13 HRPRGPIMALYSSPGPKYLIPPTTGFMKHTPTKLRAPAYSFRGA 56
H P P + SPGP L P ++G + ++ T +R P+ S G+
Sbjct: 708 HLPPQPTSTMNPSPGPSALSPGSSG-LSNSHTPVRPPSTSSTGS 750
>gi|197304786 IQ motif and Sec7 domain 1 isoform a [Homo sapiens]
Length = 1114
Score = 28.9 bits (63), Expect = 4.5
Identities = 15/34 (44%), Positives = 17/34 (50%)
Query: 210 GDKTLKPGPGAHSPEKVTLTKPCAPVVTFGIKHS 243
G K KP P AH P L P PVV ++HS
Sbjct: 974 GSKRGKPPPQAHLPSAPALPPPHPPVVLPHLQHS 1007
>gi|89886221 hypothetical protein LOC643923 [Homo sapiens]
Length = 127
Score = 28.9 bits (63), Expect = 4.5
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 16/101 (15%)
Query: 2 TEEVWMGTWRPHRPRGPIMALYSSP-----GPKYLIPPTTGFMKHTPTKLRAPAYSFRGA 56
T W+G P P+ AL++S G + PP G LRA ++ R A
Sbjct: 5 TRAAWLGRGAGLGPWEPL-ALWASVSREELGSRAAGPPDCGV-------LRAASWEERSA 56
Query: 57 PML--LAENCSPGPRYNVNPKILRTGK-DLGPAYSILGRYQ 94
+L + NC P +N+ + R GK P +++ YQ
Sbjct: 57 GLLSCASSNCWETPHFNIGASLSRAGKYAANPQWAVDWYYQ 97
>gi|104487002 protein tyrosine phosphatase, receptor type, D isoform
5 precursor [Homo sapiens]
Length = 1502
Score = 28.5 bits (62), Expect = 5.9
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 82 DLGPAYSILGRYQTKTMLTPGPGDYFPEKSTKYVFDSAPSHSISARTKAFRVDSTP 137
D+GP ++ R +T TML G+ PE + F + + + R K R TP
Sbjct: 129 DMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSGGTP 184
>gi|42544243 dynamin 3 isoform a [Homo sapiens]
Length = 863
Score = 28.5 bits (62), Expect = 5.9
Identities = 48/192 (25%), Positives = 67/192 (34%), Gaps = 32/192 (16%)
Query: 44 TKLRAPAYSFRGAPMLLAENCSPGPRYNVNPKILRTGKDLGPAYSILGRYQTKTMLTPGP 103
++L A YS L+ E+ R + ++LR + L A I+G T T+ TP P
Sbjct: 693 SELLAQLYSSEDQNTLMEESAEQAQRRD---EMLRMYQALKEALGIIGDISTATVSTPAP 749
Query: 104 GDYFPEKSTKYVFDSAPSHSISARTKAFRVDSTPGPAAYMLPMVMGP---NTVGKASQPS 160
V DS HS R P P P + P T G+ P+
Sbjct: 750 PP---------VDDSWIQHS--------RRSPPPSPTTQRRPTLSAPLARPTSGRGPAPA 792
Query: 161 FSIKGRSKLGGFSDDLHKTPGPAAYRQTDVRVTKFKA-PQYTMAARVEPPGDKTLKPGPG 219
G G P P +D F A PQ PP + +P P
Sbjct: 793 IPSPGPHS-GAPPVPFRPGPLPPFPSSSD----SFGAPPQVPSRPTRAPPSVPSRRPPP- 846
Query: 220 AHSPEKVTLTKP 231
SP + T+ +P
Sbjct: 847 --SPTRPTIIRP 856
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.135 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,401,710
Number of Sequences: 37866
Number of extensions: 777159
Number of successful extensions: 1920
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 1862
Number of HSP's gapped (non-prelim): 62
length of query: 254
length of database: 18,247,518
effective HSP length: 100
effective length of query: 154
effective length of database: 14,460,918
effective search space: 2226981372
effective search space used: 2226981372
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.