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Search of human proteins with 194394158
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|194394158 nicotinate phosphoribosyltransferase domain
containing 1 [Homo sapiens]
(538 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|194394158 nicotinate phosphoribosyltransferase domain contain... 1058 0.0
gi|9506687 RTP801 [Homo sapiens] 34 0.39
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ... 33 0.66
gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 ... 33 0.66
gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [... 33 0.66
gi|50658061 TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member... 31 2.5
gi|13876384 cell division cycle associated 3 [Homo sapiens] 31 3.3
gi|239745299 PREDICTED: hypothetical protein [Homo sapiens] 30 4.3
gi|61966923 forkhead box B2 [Homo sapiens] 30 4.3
gi|239747300 PREDICTED: hypothetical protein XP_002346414 [Homo ... 30 5.6
gi|239741124 PREDICTED: hypothetical protein XP_002342114 [Homo ... 30 5.6
gi|18860918 xylulokinase [Homo sapiens] 30 5.6
gi|191252785 centrobin, centrosomal BRCA2 interacting protein is... 30 5.6
gi|80861396 centrobin, centrosomal BRCA2 interacting protein iso... 30 5.6
gi|239745060 PREDICTED: similar to breast cancer anti-estrogen r... 30 7.3
gi|205277425 immunoglobulin superfamily, member 9 isoform a [Hom... 29 9.5
gi|205277423 immunoglobulin superfamily, member 9 isoform b [Hom... 29 9.5
gi|30794216 tripartite motif-containing 56 [Homo sapiens] 29 9.5
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] 29 9.5
>gi|194394158 nicotinate phosphoribosyltransferase domain containing
1 [Homo sapiens]
Length = 538
Score = 1058 bits (2735), Expect = 0.0
Identities = 538/538 (100%), Positives = 538/538 (100%)
Query: 1 MAAEQDPEARAAARPLLTDLYQATMALGYWRAGRARDAAEFELFFRRCPFGGAFALAAGL 60
MAAEQDPEARAAARPLLTDLYQATMALGYWRAGRARDAAEFELFFRRCPFGGAFALAAGL
Sbjct: 1 MAAEQDPEARAAARPLLTDLYQATMALGYWRAGRARDAAEFELFFRRCPFGGAFALAAGL 60
Query: 61 RDCVRFLRAFRLRDADVQFLASVLPPDTDPAFFEHLRALDCSEVTVRALPEGSLAFPGVP 120
RDCVRFLRAFRLRDADVQFLASVLPPDTDPAFFEHLRALDCSEVTVRALPEGSLAFPGVP
Sbjct: 61 RDCVRFLRAFRLRDADVQFLASVLPPDTDPAFFEHLRALDCSEVTVRALPEGSLAFPGVP 120
Query: 121 LLQVSGPLLVVQLLETPLLCLVSYASLVATNAARLRLIAGPEKRLLEMGLRRAQGPDGGL 180
LLQVSGPLLVVQLLETPLLCLVSYASLVATNAARLRLIAGPEKRLLEMGLRRAQGPDGGL
Sbjct: 121 LLQVSGPLLVVQLLETPLLCLVSYASLVATNAARLRLIAGPEKRLLEMGLRRAQGPDGGL 180
Query: 181 TASTYSYLGGFDSSSNVLAGQLRGVPVAGTLAHSFVTSFSGSEVPPDPMLAPAAGEGPGV 240
TASTYSYLGGFDSSSNVLAGQLRGVPVAGTLAHSFVTSFSGSEVPPDPMLAPAAGEGPGV
Sbjct: 181 TASTYSYLGGFDSSSNVLAGQLRGVPVAGTLAHSFVTSFSGSEVPPDPMLAPAAGEGPGV 240
Query: 241 DLAAKAQVWLEQVCAHLGLGVQEPHPGERAAFVAYALAFPRAFQGLLDTYSVWRSGLPNF 300
DLAAKAQVWLEQVCAHLGLGVQEPHPGERAAFVAYALAFPRAFQGLLDTYSVWRSGLPNF
Sbjct: 241 DLAAKAQVWLEQVCAHLGLGVQEPHPGERAAFVAYALAFPRAFQGLLDTYSVWRSGLPNF 300
Query: 301 LAVALALGELGYRAVGVRLDSGDLLQQAQEIRKVFRAAAAQFQVPWLESVLIVVSNNIDE 360
LAVALALGELGYRAVGVRLDSGDLLQQAQEIRKVFRAAAAQFQVPWLESVLIVVSNNIDE
Sbjct: 301 LAVALALGELGYRAVGVRLDSGDLLQQAQEIRKVFRAAAAQFQVPWLESVLIVVSNNIDE 360
Query: 361 EALARLAQEGSEVNVIGIGTSVVTCPQQPSLGGVYKLVAVGGQPRMKLTEDPEKQTLPGS 420
EALARLAQEGSEVNVIGIGTSVVTCPQQPSLGGVYKLVAVGGQPRMKLTEDPEKQTLPGS
Sbjct: 361 EALARLAQEGSEVNVIGIGTSVVTCPQQPSLGGVYKLVAVGGQPRMKLTEDPEKQTLPGS 420
Query: 421 KAAFRLLGSDGSPLMDMLQLAEEPVPQAGQELRVWPPGAQEPCTVRPAQVEPLLRLCLQQ 480
KAAFRLLGSDGSPLMDMLQLAEEPVPQAGQELRVWPPGAQEPCTVRPAQVEPLLRLCLQQ
Sbjct: 421 KAAFRLLGSDGSPLMDMLQLAEEPVPQAGQELRVWPPGAQEPCTVRPAQVEPLLRLCLQQ 480
Query: 481 GQLCEPLPSLAESRALAQLSLSRLSPEHRRLRSPAQYQVVLSERLQALVNSLCAGQSP 538
GQLCEPLPSLAESRALAQLSLSRLSPEHRRLRSPAQYQVVLSERLQALVNSLCAGQSP
Sbjct: 481 GQLCEPLPSLAESRALAQLSLSRLSPEHRRLRSPAQYQVVLSERLQALVNSLCAGQSP 538
>gi|9506687 RTP801 [Homo sapiens]
Length = 232
Score = 33.9 bits (76), Expect = 0.39
Identities = 43/128 (33%), Positives = 57/128 (44%), Gaps = 26/128 (20%)
Query: 404 PRMKLTEDPEK--------QTLPGSKAAFRLLGSDGSPLMDMLQLAEEPVPQAGQELRVW 455
P +L DPE Q L S A RL GS L + + V Q G+EL
Sbjct: 79 PDFELLSDPEDEHLCANLMQLLQESLAQARL----GSRRPARLLMPSQLVSQVGKELLRL 134
Query: 456 PPGAQEPCTVRPAQVEPLLRLCLQQGQLCEPLPSLAESRALA---QLSL-----SRLSPE 507
EPC +R A LL +C++QG+ C + LA +L QL+L SRL P+
Sbjct: 135 --AYSEPCGLRGA----LLDVCVEQGKSCHSVGQLALDPSLVPTFQLTLVLRLDSRLWPK 188
Query: 508 HRRLRSPA 515
+ L S A
Sbjct: 189 IQGLFSSA 196
>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3
[Homo sapiens]
Length = 1125
Score = 33.1 bits (74), Expect = 0.66
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 12/116 (10%)
Query: 403 QPRMK-LTEDPEKQTLP----GSKAAFRLLGSDGSPLMDMLQLAEEPVPQAGQELRVWPP 457
QPRM + +DP +P G F LL + P M Q P P Q +
Sbjct: 342 QPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTP--PFPPMAQPVIPPTPPVQQPFQASFQ 399
Query: 458 GAQEPCTVRPAQVEPLLRLCLQQGQLCEPLPSLAESRALAQLSLSRLSPEHRRLRS 513
EP T +P Q E + ++Q + E ++++R S SR SP+ RR RS
Sbjct: 400 AQNEPLTQKPHQQE----MEVEQPCIQEVKRHMSDNRKSRSRSASR-SPKRRRSRS 450
>gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2
[Homo sapiens]
Length = 1132
Score = 33.1 bits (74), Expect = 0.66
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 12/116 (10%)
Query: 403 QPRMK-LTEDPEKQTLP----GSKAAFRLLGSDGSPLMDMLQLAEEPVPQAGQELRVWPP 457
QPRM + +DP +P G F LL + P M Q P P Q +
Sbjct: 327 QPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTP--PFPPMAQPVIPPTPPVQQPFQASFQ 384
Query: 458 GAQEPCTVRPAQVEPLLRLCLQQGQLCEPLPSLAESRALAQLSLSRLSPEHRRLRS 513
EP T +P Q E + ++Q + E ++++R S SR SP+ RR RS
Sbjct: 385 AQNEPLTQKPHQQE----MEVEQPCIQEVKRHMSDNRKSRSRSASR-SPKRRRSRS 435
>gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1
[Homo sapiens]
Length = 1147
Score = 33.1 bits (74), Expect = 0.66
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 12/116 (10%)
Query: 403 QPRMK-LTEDPEKQTLP----GSKAAFRLLGSDGSPLMDMLQLAEEPVPQAGQELRVWPP 457
QPRM + +DP +P G F LL + P M Q P P Q +
Sbjct: 342 QPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTP--PFPPMAQPVIPPTPPVQQPFQASFQ 399
Query: 458 GAQEPCTVRPAQVEPLLRLCLQQGQLCEPLPSLAESRALAQLSLSRLSPEHRRLRS 513
EP T +P Q E + ++Q + E ++++R S SR SP+ RR RS
Sbjct: 400 AQNEPLTQKPHQQE----MEVEQPCIQEVKRHMSDNRKSRSRSASR-SPKRRRSRS 450
>gi|50658061 TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1
[Homo sapiens]
Length = 1168
Score = 31.2 bits (69), Expect = 2.5
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 11/69 (15%)
Query: 413 EKQTLPGSKAAFRLLGSDGSPLMDM-LQLAEEPVPQAGQE--------LRVWPPGAQEPC 463
EK+ LP S+++F+LLGS D L EEP P + Q+ L +P QEP
Sbjct: 549 EKEALPISESSFKLLGSSEDLSSDSESHLPEEPAPLSPQQAFRRRANTLSHFPIECQEP- 607
Query: 464 TVRPAQVEP 472
+PA+ P
Sbjct: 608 -PQPARGSP 615
>gi|13876384 cell division cycle associated 3 [Homo sapiens]
Length = 268
Score = 30.8 bits (68), Expect = 3.3
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 206 PVAGTLAHSFVTSFSGSEVPPDPMLAPAAGEGPGVDLAAKAQVWLEQ 252
P+ L+ F T S S +PP+P+L P A +DL Q+ +E+
Sbjct: 88 PLVKQLSEVFETEDSKSNLPPEPVLPPEAPLSSELDLPLGTQLSVEE 134
>gi|239745299 PREDICTED: hypothetical protein [Homo sapiens]
Length = 523
Score = 30.4 bits (67), Expect = 4.3
Identities = 19/59 (32%), Positives = 24/59 (40%)
Query: 475 RLCLQQGQLCEPLPSLAESRALAQLSLSRLSPEHRRLRSPAQYQVVLSERLQALVNSLC 533
RLC Q+ +LCE L E RL + RLR + ERL+ LC
Sbjct: 256 RLCEQEERLCEQEERLREQEERLHEQEERLCEQEERLREQEERLCEQEERLREQEERLC 314
>gi|61966923 forkhead box B2 [Homo sapiens]
Length = 432
Score = 30.4 bits (67), Expect = 4.3
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 13/86 (15%)
Query: 175 GPDGGLTASTYSYLGGFDS-SSNVLAGQLRGVPVAG----------TLAHSFVTSFSGSE 223
G G + +S + ++G DS ++ A GVPV +L HS S
Sbjct: 304 GQLGNVVSSVWPHVGVMDSVAAAAAAAAAAGVPVGPEYGAFGVPVKSLCHSASQSLPAMP 363
Query: 224 VP--PDPMLAPAAGEGPGVDLAAKAQ 247
VP P P L P + PG+ + A +Q
Sbjct: 364 VPIKPTPALPPVSALQPGLTVPAASQ 389
>gi|239747300 PREDICTED: hypothetical protein XP_002346414 [Homo
sapiens]
Length = 470
Score = 30.0 bits (66), Expect = 5.6
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 226 PDPMLAPAAGEGPGVDLAAKAQVWLEQVCAHLGLGVQEPHPGER 269
P PML+P + PGV+L A+A CA G G P G R
Sbjct: 196 PPPMLSPGLAQSPGVELHARAHS-RAHTCAGGGEGDPGPIVGGR 238
>gi|239741124 PREDICTED: hypothetical protein XP_002342114 [Homo
sapiens]
Length = 470
Score = 30.0 bits (66), Expect = 5.6
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 226 PDPMLAPAAGEGPGVDLAAKAQVWLEQVCAHLGLGVQEPHPGER 269
P PML+P + PGV+L A+A CA G G P G R
Sbjct: 196 PPPMLSPGLAQSPGVELHARAHS-RAHTCAGGGEGDPGPIVGGR 238
>gi|18860918 xylulokinase [Homo sapiens]
Length = 536
Score = 30.0 bits (66), Expect = 5.6
Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 17/117 (14%)
Query: 210 TLAHSFVTS-FSGSEVPPDPMLAPAAGEGPGVDLAA-KAQVWLEQVCAHLGLGVQEPHPG 267
+L SF S F GS P D +G G++L + +VW Q C LG PH
Sbjct: 194 SLVSSFAASLFLGSYSPID------YSDGSGMNLLQIQDKVW-SQAC----LGACAPHLE 242
Query: 268 ERAAFVAYALAFPRAFQGLLDTYSVWRSGLPNFLAVALALGELGYRAVGVRLDSGDL 324
E+ + + + G + +Y V R G P V G+ G+RL+ GD+
Sbjct: 243 EKLSPPVPSCSVV----GAISSYYVQRYGFPPGCKVVAFTGDNPASLAGMRLEEGDI 295
>gi|191252785 centrobin, centrosomal BRCA2 interacting protein
isoform alpha [Homo sapiens]
Length = 903
Score = 30.0 bits (66), Expect = 5.6
Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 435 MDMLQLAEEPVPQAGQELRVWPPGAQEPCTVRPAQVEPLLRLCLQQG---QLCEPLPSLA 491
M + +A +PV Q +E R PGA + + LL Q Q EP P L
Sbjct: 602 MPPMAVALKPVLQQSREARDELPGAPPVLCSSSSDLSLLLGPSFQSQHSFQPLEPKPDLT 661
Query: 492 ESRALAQLSLSRLSPEHRRLR 512
S A A +L P+HR R
Sbjct: 662 SSTAGAFSALGAFHPDHRAER 682
>gi|80861396 centrobin, centrosomal BRCA2 interacting protein
isoform beta [Homo sapiens]
Length = 925
Score = 30.0 bits (66), Expect = 5.6
Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 435 MDMLQLAEEPVPQAGQELRVWPPGAQEPCTVRPAQVEPLLRLCLQQG---QLCEPLPSLA 491
M + +A +PV Q +E R PGA + + LL Q Q EP P L
Sbjct: 602 MPPMAVALKPVLQQSREARDELPGAPPVLCSSSSDLSLLLGPSFQSQHSFQPLEPKPDLT 661
Query: 492 ESRALAQLSLSRLSPEHRRLR 512
S A A +L P+HR R
Sbjct: 662 SSTAGAFSALGAFHPDHRAER 682
>gi|239745060 PREDICTED: similar to breast cancer anti-estrogen
resistance 1 [Homo sapiens]
Length = 353
Score = 29.6 bits (65), Expect = 7.3
Identities = 23/78 (29%), Positives = 30/78 (38%), Gaps = 2/78 (2%)
Query: 404 PRMKLTEDPEKQTLPGSKAAFRLLGSDGSPLMDMLQLAEEPVPQAGQELRVWPPGAQEPC 463
P++ P T PG +A F L S G L ++ P+A +R G
Sbjct: 260 PQVTEQVQPSLSTAPGDRAVFPQLCSSGRTLRIHVEKEAVTTPEASSPVR--SRGTPRSS 317
Query: 464 TVRPAQVEPLLRLCLQQG 481
A EP LC QQG
Sbjct: 318 RHSKAAHEPCDWLCSQQG 335
>gi|205277425 immunoglobulin superfamily, member 9 isoform a [Homo
sapiens]
Length = 1179
Score = 29.3 bits (64), Expect = 9.5
Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Query: 405 RMKLTEDPEKQTLP-GSKAAFRLLGSDGSPLMDMLQLAEEPVPQAGQELRVW--PPGAQE 461
R +L +DP P G AA LGS + L+L PVP Q L +W P G
Sbjct: 770 RKRLRQDPPLIFSPTGKSAAPSALGSGSPDSVAKLKLQGSPVPSLRQSL-LWGDPAGTPS 828
Query: 462 PCTVRPAQVEPL 473
P P+ PL
Sbjct: 829 PHPDPPSSRGPL 840
>gi|205277423 immunoglobulin superfamily, member 9 isoform b [Homo
sapiens]
Length = 1163
Score = 29.3 bits (64), Expect = 9.5
Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Query: 405 RMKLTEDPEKQTLP-GSKAAFRLLGSDGSPLMDMLQLAEEPVPQAGQELRVW--PPGAQE 461
R +L +DP P G AA LGS + L+L PVP Q L +W P G
Sbjct: 754 RKRLRQDPPLIFSPTGKSAAPSALGSGSPDSVAKLKLQGSPVPSLRQSL-LWGDPAGTPS 812
Query: 462 PCTVRPAQVEPL 473
P P+ PL
Sbjct: 813 PHPDPPSSRGPL 824
>gi|30794216 tripartite motif-containing 56 [Homo sapiens]
Length = 755
Score = 29.3 bits (64), Expect = 9.5
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 27/171 (15%)
Query: 337 AAAAQFQVPWLESVLIVVSNN---------IDEEALARL----AQEGSEVNVIGIGTSVV 383
A A + + P LE +L V NN +++EALARL A+ G++V G
Sbjct: 206 AEAVRARRPGLEGLLAGVDNNLVELEAARRVEKEALARLREQAARVGTQVEEAAEGVLRA 265
Query: 384 TCPQQPSLGGVYK--LVAVGGQPRMKLTEDPEKQTLPGSKAAFRLLGSDGSPLMDMLQLA 441
Q+ + G + + A R +L E ++ + + AAF ++L L
Sbjct: 266 LLAQKQEVLGQLRAHVEAAEEAARERLAELEGREQVARAAAAFARRVLSLGREAEILSL- 324
Query: 442 EEPVPQAGQELR--VWPPGAQEPCTVRPAQVEP--------LLRLCLQQGQ 482
E + Q ++L+ W PG PC + ++ P LLRL ++ Q
Sbjct: 325 EGAIAQRLRQLQGCPWAPG-PAPCLLPQLELHPGLLDKNCHLLRLSFEEQQ 374
>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
Length = 1003
Score = 29.3 bits (64), Expect = 9.5
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 176 PDGGLTASTYSYLGGFDSSSNVLAGQLRGVPVAGTLAHSF--VTSFSGSEVPPDPMLAPA 233
P+ GL S + G + L+ L P + L HS V + G + PP+P+L P
Sbjct: 523 PEQGLALSGAGFPGMLGALPLPLS--LGQPPPSPLLNHSLFGVLTGGGGQPPPEPLLPPP 580
Query: 234 AGEGP 238
G GP
Sbjct: 581 GGPGP 585
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.136 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,623,061
Number of Sequences: 37866
Number of extensions: 1078872
Number of successful extensions: 2919
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 2907
Number of HSP's gapped (non-prelim): 28
length of query: 538
length of database: 18,247,518
effective HSP length: 107
effective length of query: 431
effective length of database: 14,195,856
effective search space: 6118413936
effective search space used: 6118413936
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.