Guide to the Human Genome
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Name: NAPRT1 Sequence: fasta or formatted (538aa) NCBI GI: 194394158
Description:

nicotinate phosphoribosyltransferase domain containing 1

Referenced in:

Vitamin Pathways, Coenzymes, and 1-Carbon Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.2         71           4
 C cysteine            1.9         10           1
 D aspartate           3.7         20           1
 E glutamate           6.1         33           2
 F phenylalanine       3.9         21           2
 G glycine             8.4         45           2
 H histidine           0.9          5           1
 I isoleucine          1.1          6           1
 K lysine              1.3          7           1
 L leucine            15.1         81           2
 M methionine          1.3          7           1
 N asparagine          1.3          7           2
 P proline             7.8         42           2
 Q glutamine           6.3         34           2
 R arginine            7.2         39           2
 S serine              6.5         35           3
 T threonine           3.0         16           1
 V valine              8.2         44           2
 W tryptophan          0.9          5           1
 Y tyrosine            1.9         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nicotinate phosphoribosyltransferase domain contain... 
DDIT4                 0.009   RTP801 
SFRS15                0.008   splicing factor, arginine/serine-rich 15 isoform 3 ...
SFRS15                0.008   splicing factor, arginine/serine-rich 15 isoform 2 ...
SFRS15                0.008   splicing factor, arginine/serine-rich 15 isoform 1 [...
TBC1D1                0.006   TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member...
CDCA3                 0.006   cell division cycle associated 3 
LOC100133220          0.005   PREDICTED: hypothetical protein 
FOXB2                 0.005   forkhead box B2 
LOC100290359          0.005   PREDICTED: hypothetical protein XP_002346414 
LOC100287202          0.005   PREDICTED: hypothetical protein XP_002342114 
XYLB                  0.005   xylulokinase 
CNTROB                0.005   centrobin, centrosomal BRCA2 interacting protein is...
CNTROB                0.005   centrobin, centrosomal BRCA2 interacting protein iso...
LOC100133063          0.005   PREDICTED: similar to breast cancer anti-estrogen r...
IGSF9                 0.004   immunoglobulin superfamily, member 9 isoform a [Hom...
IGSF9                 0.004   immunoglobulin superfamily, member 9 isoform b [Hom...
TRIM56                0.004   tripartite motif-containing 56 
MBD6                  0.004   methyl-CpG binding domain protein 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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