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Search of human proteins with 194239701
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|194239701 tubulin folding cofactor E-like [Homo sapiens]
(424 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|194239701 tubulin folding cofactor E-like [Homo sapiens] 856 0.0
gi|194239699 tubulin folding cofactor E-like [Homo sapiens] 856 0.0
gi|118442828 beta-tubulin cofactor E [Homo sapiens] 127 2e-29
gi|4507375 beta-tubulin cofactor E [Homo sapiens] 127 2e-29
gi|66472382 nischarin [Homo sapiens] 50 4e-06
gi|153791330 leucine rich repeat neuronal 1 [Homo sapiens] 45 2e-04
gi|4506013 protein phosphatase 1, regulatory subunit 7 [Homo sap... 44 2e-04
gi|164607156 axonemal dynein light chain 1 [Homo sapiens] 43 6e-04
gi|21389483 leucine-rich repeats and guanylate kinase domain con... 42 0.001
gi|42544233 leucine rich repeat neuronal 2 [Homo sapiens] 41 0.002
gi|42544231 leucine rich repeat neuronal 2 [Homo sapiens] 41 0.002
gi|21389431 leucine rich repeat containing 39 [Homo sapiens] 40 0.003
gi|156139147 leucine rich repeat transmembrane neuronal 4 isofor... 40 0.003
gi|197927168 leucine rich repeat transmembrane neuronal 4 isofor... 40 0.003
gi|4503743 flightless I homolog [Homo sapiens] 40 0.004
gi|153791507 leucine rich repeat neuronal 3 [Homo sapiens] 40 0.005
gi|153792651 leucine rich repeat neuronal 3 [Homo sapiens] 40 0.005
gi|153792227 leucine rich repeat neuronal 3 [Homo sapiens] 40 0.005
gi|31621309 leucine rich repeat containing 6 [Homo sapiens] 39 0.007
gi|50593002 small nuclear ribonucleoprotein polypeptide A' [Homo... 38 0.020
gi|20143971 toll-like receptor 6 [Homo sapiens] 37 0.026
gi|14042939 chromosome 10 open reading frame 11 [Homo sapiens] 37 0.026
gi|15487670 nuclear RNA export factor 1 isoform 1 [Homo sapiens] 37 0.034
gi|41350337 toll-like receptor 1 [Homo sapiens] 37 0.034
gi|42822866 ribonuclease/angiogenin inhibitor [Homo sapiens] 37 0.034
gi|42822864 ribonuclease/angiogenin inhibitor [Homo sapiens] 37 0.034
gi|42822868 ribonuclease/angiogenin inhibitor [Homo sapiens] 37 0.034
gi|42822870 ribonuclease/angiogenin inhibitor [Homo sapiens] 37 0.034
gi|42822874 ribonuclease/angiogenin inhibitor [Homo sapiens] 37 0.034
gi|42794608 ribonuclease/angiogenin inhibitor [Homo sapiens] 37 0.034
>gi|194239701 tubulin folding cofactor E-like [Homo sapiens]
Length = 424
Score = 856 bits (2211), Expect = 0.0
Identities = 424/424 (100%), Positives = 424/424 (100%)
Query: 1 MDQPSGRSFMQVLCEKYSPENFPYRRGPGMGVHVPATPQGSPMKDRLNLPSVLVLNSCGI 60
MDQPSGRSFMQVLCEKYSPENFPYRRGPGMGVHVPATPQGSPMKDRLNLPSVLVLNSCGI
Sbjct: 1 MDQPSGRSFMQVLCEKYSPENFPYRRGPGMGVHVPATPQGSPMKDRLNLPSVLVLNSCGI 60
Query: 61 TCAGDEKEIAAFCAHVSELDLSDNKLEDWHEVSKIVSNVPQLEFLNLSSNPLNLSVLERT 120
TCAGDEKEIAAFCAHVSELDLSDNKLEDWHEVSKIVSNVPQLEFLNLSSNPLNLSVLERT
Sbjct: 61 TCAGDEKEIAAFCAHVSELDLSDNKLEDWHEVSKIVSNVPQLEFLNLSSNPLNLSVLERT 120
Query: 121 CAGSFSGVRKLVLNNSKASWETVHMILQELPDLEELFLCLNDYETVSCPSICCHSLKLLH 180
CAGSFSGVRKLVLNNSKASWETVHMILQELPDLEELFLCLNDYETVSCPSICCHSLKLLH
Sbjct: 121 CAGSFSGVRKLVLNNSKASWETVHMILQELPDLEELFLCLNDYETVSCPSICCHSLKLLH 180
Query: 181 ITDNNLQDWTEIRKLGVMFPSLDTLVLANNHLNAIEEPDDSLARLFPNLRSISLHKSGLQ 240
ITDNNLQDWTEIRKLGVMFPSLDTLVLANNHLNAIEEPDDSLARLFPNLRSISLHKSGLQ
Sbjct: 181 ITDNNLQDWTEIRKLGVMFPSLDTLVLANNHLNAIEEPDDSLARLFPNLRSISLHKSGLQ 240
Query: 241 SWEDIDKLNSFPKLEEVRLLGIPLLQPYTTEERRKLVIARLPSVSKLNGSVVTDGEREDS 300
SWEDIDKLNSFPKLEEVRLLGIPLLQPYTTEERRKLVIARLPSVSKLNGSVVTDGEREDS
Sbjct: 241 SWEDIDKLNSFPKLEEVRLLGIPLLQPYTTEERRKLVIARLPSVSKLNGSVVTDGEREDS 300
Query: 301 ERFFIRYYVDVPQEEVPFRYHELITKYGKLEPLAEVDLRPQSSAKVEVHFNDQVEEMSIR 360
ERFFIRYYVDVPQEEVPFRYHELITKYGKLEPLAEVDLRPQSSAKVEVHFNDQVEEMSIR
Sbjct: 301 ERFFIRYYVDVPQEEVPFRYHELITKYGKLEPLAEVDLRPQSSAKVEVHFNDQVEEMSIR 360
Query: 361 LDQTVAELKKQLKTLVQLPTSNMLLYYFDHEAPFGPEEMKYSSRALHSFGIRDGDKIYVE 420
LDQTVAELKKQLKTLVQLPTSNMLLYYFDHEAPFGPEEMKYSSRALHSFGIRDGDKIYVE
Sbjct: 361 LDQTVAELKKQLKTLVQLPTSNMLLYYFDHEAPFGPEEMKYSSRALHSFGIRDGDKIYVE 420
Query: 421 SKTK 424
SKTK
Sbjct: 421 SKTK 424
>gi|194239699 tubulin folding cofactor E-like [Homo sapiens]
Length = 424
Score = 856 bits (2211), Expect = 0.0
Identities = 424/424 (100%), Positives = 424/424 (100%)
Query: 1 MDQPSGRSFMQVLCEKYSPENFPYRRGPGMGVHVPATPQGSPMKDRLNLPSVLVLNSCGI 60
MDQPSGRSFMQVLCEKYSPENFPYRRGPGMGVHVPATPQGSPMKDRLNLPSVLVLNSCGI
Sbjct: 1 MDQPSGRSFMQVLCEKYSPENFPYRRGPGMGVHVPATPQGSPMKDRLNLPSVLVLNSCGI 60
Query: 61 TCAGDEKEIAAFCAHVSELDLSDNKLEDWHEVSKIVSNVPQLEFLNLSSNPLNLSVLERT 120
TCAGDEKEIAAFCAHVSELDLSDNKLEDWHEVSKIVSNVPQLEFLNLSSNPLNLSVLERT
Sbjct: 61 TCAGDEKEIAAFCAHVSELDLSDNKLEDWHEVSKIVSNVPQLEFLNLSSNPLNLSVLERT 120
Query: 121 CAGSFSGVRKLVLNNSKASWETVHMILQELPDLEELFLCLNDYETVSCPSICCHSLKLLH 180
CAGSFSGVRKLVLNNSKASWETVHMILQELPDLEELFLCLNDYETVSCPSICCHSLKLLH
Sbjct: 121 CAGSFSGVRKLVLNNSKASWETVHMILQELPDLEELFLCLNDYETVSCPSICCHSLKLLH 180
Query: 181 ITDNNLQDWTEIRKLGVMFPSLDTLVLANNHLNAIEEPDDSLARLFPNLRSISLHKSGLQ 240
ITDNNLQDWTEIRKLGVMFPSLDTLVLANNHLNAIEEPDDSLARLFPNLRSISLHKSGLQ
Sbjct: 181 ITDNNLQDWTEIRKLGVMFPSLDTLVLANNHLNAIEEPDDSLARLFPNLRSISLHKSGLQ 240
Query: 241 SWEDIDKLNSFPKLEEVRLLGIPLLQPYTTEERRKLVIARLPSVSKLNGSVVTDGEREDS 300
SWEDIDKLNSFPKLEEVRLLGIPLLQPYTTEERRKLVIARLPSVSKLNGSVVTDGEREDS
Sbjct: 241 SWEDIDKLNSFPKLEEVRLLGIPLLQPYTTEERRKLVIARLPSVSKLNGSVVTDGEREDS 300
Query: 301 ERFFIRYYVDVPQEEVPFRYHELITKYGKLEPLAEVDLRPQSSAKVEVHFNDQVEEMSIR 360
ERFFIRYYVDVPQEEVPFRYHELITKYGKLEPLAEVDLRPQSSAKVEVHFNDQVEEMSIR
Sbjct: 301 ERFFIRYYVDVPQEEVPFRYHELITKYGKLEPLAEVDLRPQSSAKVEVHFNDQVEEMSIR 360
Query: 361 LDQTVAELKKQLKTLVQLPTSNMLLYYFDHEAPFGPEEMKYSSRALHSFGIRDGDKIYVE 420
LDQTVAELKKQLKTLVQLPTSNMLLYYFDHEAPFGPEEMKYSSRALHSFGIRDGDKIYVE
Sbjct: 361 LDQTVAELKKQLKTLVQLPTSNMLLYYFDHEAPFGPEEMKYSSRALHSFGIRDGDKIYVE 420
Query: 421 SKTK 424
SKTK
Sbjct: 421 SKTK 424
>gi|118442828 beta-tubulin cofactor E [Homo sapiens]
Length = 527
Score = 127 bits (319), Expect = 2e-29
Identities = 102/397 (25%), Positives = 184/397 (46%), Gaps = 37/397 (9%)
Query: 55 LNSCGITCAGDEKEIAAFCAHVSELDLSDNKLEDWHEVSKIVSNVPQLEFLNLSSNPLNL 114
L +C ++CAG++ +A C ++ ++DLS N L W EV I + LE LN+S N L
Sbjct: 134 LRNCAVSCAGEKGGVAEACPNIRKVDLSKNLLSSWDEVIHIADQLRHLEVLNVSENKLKF 193
Query: 115 ---SVLERTCAGSFSGVRKLVLNNSKASWETVHMILQELPDLEELFLCLNDYETVSCPSI 171
SVL G+ S ++ LVLN + +W V + P LEEL+L N+ P+
Sbjct: 194 PSGSVL----TGTLSVLKVLVLNQTGITWAEVLRCVAGCPGLEELYLESNNIFISERPTD 249
Query: 172 CCHSLKLLHITDNNLQDWTEIRKLGVMFPSLDTLVLANNHLNAIEEPDDSLA---RLFPN 228
++KLL ++ N L D ++ + + P L+ L+L++ ++++ PD + +FP+
Sbjct: 250 VLQTVKLLDLSSNQLIDENQLYLIAHL-PRLEQLILSDTGISSLHFPDAGIGCKTSMFPS 308
Query: 229 LRSISLHKSGLQSWEDIDKLNSFPKLEEVRLLGIPLL-QPYTTEERRKLVIARLPSVSKL 287
L+ + ++ + + W ++L P L + L PL + E R L+IA + + L
Sbjct: 309 LKYLVVNDNQISQWSFFNELEKLPSLRALSCLRNPLTKEDKEAETARLLIIASIGQLKTL 368
Query: 288 NGSVVTDGEREDSERFFIRYYVDV---------PQEE--------VPFRYHELITKYGKL 330
N + ER +E + + + + P++ RY L KYG
Sbjct: 369 NKCEILPEERRRAELDYRKAFGNEWKQAGGHKDPEKNRLSEEFLTAHPRYQFLCLKYGAP 428
Query: 331 E--------PLAEVDLRPQSSAKVEVHFNDQVEEMSIRLDQTVAELKKQLKTLVQLPTSN 382
E PL + K + +V E + T+ ++K L L+++P S+
Sbjct: 429 EDWELKTQQPLMLKNQLLTLKIKYPHQLDQKVLEKQLPGSMTIQKVKGLLSRLLKVPVSD 488
Query: 383 MLLYYFDHEAPFGPEEMKYSSRALHSFGIRDGDKIYV 419
+LL Y + P E++ ++L + + +GD + V
Sbjct: 489 LLLSYESPKKPGREIELENDLKSLQFYSVENGDCLLV 525
>gi|4507375 beta-tubulin cofactor E [Homo sapiens]
Length = 527
Score = 127 bits (319), Expect = 2e-29
Identities = 102/397 (25%), Positives = 184/397 (46%), Gaps = 37/397 (9%)
Query: 55 LNSCGITCAGDEKEIAAFCAHVSELDLSDNKLEDWHEVSKIVSNVPQLEFLNLSSNPLNL 114
L +C ++CAG++ +A C ++ ++DLS N L W EV I + LE LN+S N L
Sbjct: 134 LRNCAVSCAGEKGGVAEACPNIRKVDLSKNLLSSWDEVIHIADQLRHLEVLNVSENKLKF 193
Query: 115 ---SVLERTCAGSFSGVRKLVLNNSKASWETVHMILQELPDLEELFLCLNDYETVSCPSI 171
SVL G+ S ++ LVLN + +W V + P LEEL+L N+ P+
Sbjct: 194 PSGSVL----TGTLSVLKVLVLNQTGITWAEVLRCVAGCPGLEELYLESNNIFISERPTD 249
Query: 172 CCHSLKLLHITDNNLQDWTEIRKLGVMFPSLDTLVLANNHLNAIEEPDDSLA---RLFPN 228
++KLL ++ N L D ++ + + P L+ L+L++ ++++ PD + +FP+
Sbjct: 250 VLQTVKLLDLSSNQLIDENQLYLIAHL-PRLEQLILSDTGISSLHFPDAGIGCKTSMFPS 308
Query: 229 LRSISLHKSGLQSWEDIDKLNSFPKLEEVRLLGIPLL-QPYTTEERRKLVIARLPSVSKL 287
L+ + ++ + + W ++L P L + L PL + E R L+IA + + L
Sbjct: 309 LKYLVVNDNQISQWSFFNELEKLPSLRALSCLRNPLTKEDKEAETARLLIIASIGQLKTL 368
Query: 288 NGSVVTDGEREDSERFFIRYYVDV---------PQEE--------VPFRYHELITKYGKL 330
N + ER +E + + + + P++ RY L KYG
Sbjct: 369 NKCEILPEERRRAELDYRKAFGNEWKQAGGHKDPEKNRLSEEFLTAHPRYQFLCLKYGAP 428
Query: 331 E--------PLAEVDLRPQSSAKVEVHFNDQVEEMSIRLDQTVAELKKQLKTLVQLPTSN 382
E PL + K + +V E + T+ ++K L L+++P S+
Sbjct: 429 EDWELKTQQPLMLKNQLLTLKIKYPHQLDQKVLEKQLPGSMTIQKVKGLLSRLLKVPVSD 488
Query: 383 MLLYYFDHEAPFGPEEMKYSSRALHSFGIRDGDKIYV 419
+LL Y + P E++ ++L + + +GD + V
Sbjct: 489 LLLSYESPKKPGREIELENDLKSLQFYSVENGDCLLV 525
>gi|66472382 nischarin [Homo sapiens]
Length = 1504
Score = 50.1 bits (118), Expect = 4e-06
Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 33/170 (19%)
Query: 59 GITCAGDEKEIAAFCAHVSELDLSDNKLEDWHEVSKIVSNVPQLEFLNLSSNPLNLSVLE 118
G T G + ++ LDLS N + E+ + V +P++EFL+LS N L
Sbjct: 272 GTTLEGPVTAVIPTWQALTTLDLSHNSIS---EIDESVKLIPKIEFLDLSHNGL------ 322
Query: 119 RTCAGSFSGVRKLVLNNSKASWETVHMIL--QELPDLEELFLCLNDYETVSCPSICCHSL 176
LV++N + + VH+ L +L LE L L + +T++ SL
Sbjct: 323 ------------LVVDNLQHLYNLVHLDLSYNKLSSLEGLHTKLGNIKTLNLAGNLLESL 370
Query: 177 KLLH---------ITDNNLQDWTEIRKLGVMFPSLDTLVLANNHLNAIEE 217
LH + DN ++ E+R +G + P L+ + L NN L+ I +
Sbjct: 371 SGLHKLYSLVNLDLRDNRIEQMEEVRSIGSL-PCLEHVSLLNNPLSIIPD 419
>gi|153791330 leucine rich repeat neuronal 1 [Homo sapiens]
Length = 716
Score = 44.7 bits (104), Expect = 2e-04
Identities = 48/183 (26%), Positives = 78/183 (42%), Gaps = 44/183 (24%)
Query: 76 VSELDLSDNKLEDWHEVSKIVSNVPQLEFLNLSSNPLNLSVLERTCAGSFSGV---RKLV 132
+ L DNKL +++ + VP L+FL+L+ NP++ + G F + ++L
Sbjct: 241 LESLSFYDNKLVKVPQLA--LQKVPNLKFLDLNKNPIH-----KIQEGDFKNMLRLKELG 293
Query: 133 LNNSKASWETVHMILQELPDLEELFLCLNDYETVSCPSIC-CHSLKLLHITDNNLQDWTE 191
+NN L LP+L +L E + P + H L +
Sbjct: 294 INNMGELVSVDRYALDNLPELTKL-------EATNNPKLSYIHRLAFRSV---------- 336
Query: 192 IRKLGVMFPSLDTLVLANNHLNAIEEPDDSLARLFPNLRSISLHKSGLQ-----SWEDID 246
P+L++L+L NN LNAI + PNLR IS+H + L+ W + +
Sbjct: 337 --------PALESLMLNNNALNAIYQ---KTVESLPNLREISIHSNPLRCDCVIHWINSN 385
Query: 247 KLN 249
K N
Sbjct: 386 KTN 388
Score = 34.3 bits (77), Expect = 0.22
Identities = 47/188 (25%), Positives = 76/188 (40%), Gaps = 46/188 (24%)
Query: 52 VLVLNSCGITCAGDEKEIAAFCAHVSELDLSDNKLEDWHEVSKIVSNVPQLEFLNLSSNP 111
VL+L S I DE + +++ELD S N + EV ++N+ QL L+L N
Sbjct: 76 VLLLQSNNIAKTVDELQQLF---NLTELDFSQNNFTNIKEVG--LANLTQLTTLHLEENQ 130
Query: 112 LNLSVLERTCAGSFSGVRKLVLNNSKASWETVHMILQELPDLEELFLCLNDYETVSCPSI 171
+ E LQ+L +L+EL++ N T+S +
Sbjct: 131 IT---------------------------EMTDYCLQDLSNLQELYINHNQISTISAHAF 163
Query: 172 C-CHSLKLLHITDNNLQ----DWTEIRKLGVMFPSLDTLVLANNHLNAIEEPDDSLARLF 226
+L LH+ N L+ W + P+L+ L++ N + I D +
Sbjct: 164 AGLKNLLRLHLNSNKLKVIDSRWFD------STPNLEILMIGENPVIGIL---DMNFKPL 214
Query: 227 PNLRSISL 234
NLRS+ L
Sbjct: 215 ANLRSLVL 222
>gi|4506013 protein phosphatase 1, regulatory subunit 7 [Homo
sapiens]
Length = 360
Score = 44.3 bits (103), Expect = 2e-04
Identities = 58/247 (23%), Positives = 115/247 (46%), Gaps = 44/247 (17%)
Query: 78 ELDLSDNKLEDWHEVSKIVSNVPQLEFLNLSSNPL-NLSVLERTCAGSFSGVRKLVLNNS 136
ELDL DN+++ + + +LE L++S N L N+ +++ + ++KL L N+
Sbjct: 124 ELDLYDNQIKKIENLEALT----ELEILDISFNLLRNIEGVDK-----LTRLKKLFLVNN 174
Query: 137 KAS----WETVHMI---------------LQELPDLEELFLCLNDYETV----SCPSICC 173
K S +H + + L +LE LFL N + + ++
Sbjct: 175 KISKIENLSNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTNLTV 234
Query: 174 HSLKLLHITD-NNLQDWTEIRKLGVMFPSLDTL--VLANNHLNAIEEPDDSLARL----- 225
S++ +T LQ+ +R+L + ++ + + NN L ++ + + ++
Sbjct: 235 LSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISH 294
Query: 226 FPNLRSISLHKSGLQSWEDIDKLNSFPKLEEVRLLGIPLLQPYTTEERRKLVIARLPSVS 285
L+ ++ + L+SW D+D+L LE V L PL + + RRK+++A LPSV
Sbjct: 295 LTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQK--DPQYRRKVMLA-LPSVR 351
Query: 286 KLNGSVV 292
+++ + V
Sbjct: 352 QIDATFV 358
>gi|164607156 axonemal dynein light chain 1 [Homo sapiens]
Length = 190
Score = 42.7 bits (99), Expect = 6e-04
Identities = 35/160 (21%), Positives = 78/160 (48%), Gaps = 10/160 (6%)
Query: 141 ETVHMILQELPDLEELFLCLNDYETVSCPSICCHSLKLLHITDNNLQDWTEIRKLGVMFP 200
E + L L + E+L L N E ++ + +L++L + NN+++ + +G
Sbjct: 38 EKMDASLSMLANCEKLSLSTNCIEKIANLN-GLKNLRILSLGRNNIKNLNGLEAVG---D 93
Query: 201 SLDTLVLANNHLNAIEEPDDSLARLFPNLRSISLHKSGLQSWEDIDKLNSFPKLEEVRLL 260
+L+ L ++ N + ++ + L+ + + + ++ W + KL P LE++ +
Sbjct: 94 TLEELWISYNFIEKLKG-----IHIMKKLKILYMSNNLVKDWAEFVKLAELPCLEDLVFV 148
Query: 261 GIPLLQPYTTEER-RKLVIARLPSVSKLNGSVVTDGERED 299
G PL + ++ E + R+P + KL+G+ V G+ E+
Sbjct: 149 GNPLEEKHSAENNWIEEATKRVPKLKKLDGTPVIKGDEEE 188
>gi|21389483 leucine-rich repeats and guanylate kinase domain
containing [Homo sapiens]
Length = 825
Score = 41.6 bits (96), Expect = 0.001
Identities = 74/296 (25%), Positives = 127/296 (42%), Gaps = 57/296 (19%)
Query: 53 LVLNSCGITCAGDEKEIAAFCA--HVSELDLSDNKLEDWHEVSKIVSNVPQLEFLNLSSN 110
L L+ C + +++ C H+ +LDLS NK+ED VS +P L LN S N
Sbjct: 132 LTLSGCNLI------DVSILCGYVHLQKLDLSANKIED----LSCVSCMPYLLELNASQN 181
Query: 111 PLNLSVLERTCAGSFSGVRKLVLNNSKASWETVHMILQELPDLE------ELFLCLNDYE 164
L T +F + L KA + H + E+ DL +L L N+ E
Sbjct: 182 NL-------TTFFNFKPPKNL----KKADFS--HNQISEICDLSAYHALTKLILDGNEIE 228
Query: 165 TVSCPSICCHSLKLLHITDNNLQDWTEIRKLGVMFPSLDTLVLANNHLNAIEEPDDSLAR 224
+S + C++L L + +N + + KL + L L+NN + I +D A
Sbjct: 229 EISGLEM-CNNLIHLSLANNKITTINGLNKLPIKI-----LCLSNNQIEMITGLEDLKA- 281
Query: 225 LFPNLRSISLHKSGLQSWEDIDKLNSFPKLEEVRLLGIPLLQPYTTEERRKL-VIARLPS 283
L+++ L ++++S LE LL + L+ E R++ I LP
Sbjct: 282 ----LQNLDLSH---------NQISSLQGLENHDLLEVINLEDNKIAELREIEYIKNLPI 328
Query: 284 VSKLNGSVVTDGEREDSERFFIRYYVDVPQEEV---PFRYHELITKYGKLEPLAEV 336
+ LN ++ + +E SE +F ++ + E+ + E ++ K +P EV
Sbjct: 329 LRVLN--LLENPIQEKSEYWFFVIFMLLRLTELDQKKIKVEEKVSAVNKYDPPPEV 382
>gi|42544233 leucine rich repeat neuronal 2 [Homo sapiens]
Length = 713
Score = 40.8 bits (94), Expect = 0.002
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 31/160 (19%)
Query: 76 VSELDLSDNKLEDWHEVSKIVSNVPQLEFLNLSSNPLNLSVLERTCAGSFSGVRKLVLNN 135
+ L DN+L + + VP L+FL+L+ NP L+R G F+ +
Sbjct: 239 LESLSFYDNQLA--RVPRRALEQVPGLKFLDLNKNP-----LQRVGPGDFANM------- 284
Query: 136 SKASWETVHMILQELPDLEELFLCLNDYETVSCPSICCHSLKLLHITDNNLQDWTEIRKL 195
+H+ L ++EEL + ++ + V+ P L L IT+N + R
Sbjct: 285 -------LHLKELGLNNMEEL-VSIDKFALVNLP-----ELTKLDITNNPRLSFIHPRAF 331
Query: 196 GVMFPSLDTLVLANNHLNAIEEPDDSLARLFPNLRSISLH 235
+ P ++TL+L NN L+A+ + PNL+ + LH
Sbjct: 332 HHL-PQMETLMLNNNALSALHQ---QTVESLPNLQEVGLH 367
>gi|42544231 leucine rich repeat neuronal 2 [Homo sapiens]
Length = 713
Score = 40.8 bits (94), Expect = 0.002
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 31/160 (19%)
Query: 76 VSELDLSDNKLEDWHEVSKIVSNVPQLEFLNLSSNPLNLSVLERTCAGSFSGVRKLVLNN 135
+ L DN+L + + VP L+FL+L+ NP L+R G F+ +
Sbjct: 239 LESLSFYDNQLA--RVPRRALEQVPGLKFLDLNKNP-----LQRVGPGDFANM------- 284
Query: 136 SKASWETVHMILQELPDLEELFLCLNDYETVSCPSICCHSLKLLHITDNNLQDWTEIRKL 195
+H+ L ++EEL + ++ + V+ P L L IT+N + R
Sbjct: 285 -------LHLKELGLNNMEEL-VSIDKFALVNLP-----ELTKLDITNNPRLSFIHPRAF 331
Query: 196 GVMFPSLDTLVLANNHLNAIEEPDDSLARLFPNLRSISLH 235
+ P ++TL+L NN L+A+ + PNL+ + LH
Sbjct: 332 HHL-PQMETLMLNNNALSALHQ---QTVESLPNLQEVGLH 367
>gi|21389431 leucine rich repeat containing 39 [Homo sapiens]
Length = 335
Score = 40.4 bits (93), Expect = 0.003
Identities = 53/201 (26%), Positives = 87/201 (43%), Gaps = 16/201 (7%)
Query: 76 VSELDLSDNKLEDWHEVSKIVSNVPQLEFLNLSSNPLNLSVLERTCAGSFSGVRKLV-LN 134
+ EL LS NK++ V K +SN LE L L+ N + + S + KL L+
Sbjct: 131 LQELILSYNKIKT---VPKELSNCASLEKLELAVNRDICDLPQE-----LSNLLKLTHLD 182
Query: 135 NSKASWETVHMILQELPDLEELFLCLNDYETVSCPSICCHSLKLLHITDNNLQDWTEIRK 194
S + T+ + + +P LE L + N E + +L L + N + T + +
Sbjct: 183 LSMNDFTTIPLAVLNMPALEWLDMGSNKLEQLPDTIERMQNLHTLWLQRNEI---TCLPQ 239
Query: 195 LGVMFPSLDTLVLANNHLNAIEEPDDSLARLFPNLRSISLHKSGLQSWEDIDKLNSFPKL 254
+L TLVL+NN L I + +A NLR ++ + L+ + +
Sbjct: 240 TISNMKNLGTLVLSNNKLQDIPVCMEEMA----NLRFVNFRDNPLKLKVSLPPSEGTDEE 295
Query: 255 EEVRLLGIPLLQPYTTEERRK 275
EE L G+ + Y E RR+
Sbjct: 296 EERELFGLQFMHTYIQESRRR 316
Score = 29.3 bits (64), Expect = 7.1
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 43/208 (20%)
Query: 66 EKEIAAFCAHVSELDLSDNKLED--WHEVSKIVSNVPQLEFLNLSSNPLNLSVLER---- 119
EKE + E +S KL + E +++ + + E+ L S+ L L+ L+
Sbjct: 32 EKEFQHKLVRIWEERVSLTKLREKVTREDGRVILKIEKEEWKTLPSSLLKLNQLQEWQLH 91
Query: 120 --------TCAGSFSGVRKLVLNNSKASWETVHMILQELPDLEELFLCLNDYETV----- 166
G F + +VL+ S+ + + + L L+EL L N +TV
Sbjct: 92 RTGLLKIPEFIGRFQNL--IVLDLSRNTISEIPPGIGLLTRLQELILSYNKIKTVPKELS 149
Query: 167 SCPS-----------IC------CHSLKLLHITDNNLQDWTEIRKLGVMFPSLDTLVLAN 209
+C S IC + LKL H+ D ++ D+T I + P+L+ L + +
Sbjct: 150 NCASLEKLELAVNRDICDLPQELSNLLKLTHL-DLSMNDFTTIPLAVLNMPALEWLDMGS 208
Query: 210 NHLNAIEEPDDSLARLFPNLRSISLHKS 237
N L E+ D++ R+ NL ++ L ++
Sbjct: 209 NKL---EQLPDTIERM-QNLHTLWLQRN 232
>gi|156139147 leucine rich repeat transmembrane neuronal 4 isoform b
[Homo sapiens]
Length = 518
Score = 40.4 bits (93), Expect = 0.003
Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 36/211 (17%)
Query: 76 VSELDLSDNKLEDWHEVSKIVSNVPQLEFLNLSSNPLNLSVLERTCAGSFSGVRKLVLNN 135
+ EL LS NK+ H +K VP L L+LS N L E+ F G+RKL++ +
Sbjct: 111 LKELILSSNKITYLH--NKTFHPVPNLRNLDLSYNKLQTLQSEQ-----FKGLRKLIILH 163
Query: 136 SKA-SWETVHM-ILQELPDLEELFLCLNDYETVSCPSIC-CHSLKLLHITDNNLQ----- 187
++ S +TV + + Q+ +L+ L L N ++S + LK LH+ N
Sbjct: 164 LRSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFA 223
Query: 188 -------------DWTEIRKLGV----MFPSLDTLVLANNHLNAIEEPDDSLARLFPNLR 230
W IR + + SL L L+ N + IE + PNL+
Sbjct: 224 HFPRLFNLRSIYLQWNRIRSISQGLTWTWSSLHNLDLSGNDIQGIE---PGTFKCLPNLQ 280
Query: 231 SISLHKSGLQSWEDIDKLNSFPKLEEVRLLG 261
++L + L + + +N++ L + L G
Sbjct: 281 KLNLDSNKLTNISQ-ETVNAWISLISITLSG 310
>gi|197927168 leucine rich repeat transmembrane neuronal 4 isoform a
[Homo sapiens]
Length = 590
Score = 40.4 bits (93), Expect = 0.003
Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 36/211 (17%)
Query: 76 VSELDLSDNKLEDWHEVSKIVSNVPQLEFLNLSSNPLNLSVLERTCAGSFSGVRKLVLNN 135
+ EL LS NK+ H +K VP L L+LS N L E+ F G+RKL++ +
Sbjct: 111 LKELILSSNKITYLH--NKTFHPVPNLRNLDLSYNKLQTLQSEQ-----FKGLRKLIILH 163
Query: 136 SKA-SWETVHM-ILQELPDLEELFLCLNDYETVSCPSIC-CHSLKLLHITDNNLQ----- 187
++ S +TV + + Q+ +L+ L L N ++S + LK LH+ N
Sbjct: 164 LRSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFA 223
Query: 188 -------------DWTEIRKLGV----MFPSLDTLVLANNHLNAIEEPDDSLARLFPNLR 230
W IR + + SL L L+ N + IE + PNL+
Sbjct: 224 HFPRLFNLRSIYLQWNRIRSISQGLTWTWSSLHNLDLSGNDIQGIE---PGTFKCLPNLQ 280
Query: 231 SISLHKSGLQSWEDIDKLNSFPKLEEVRLLG 261
++L + L + + +N++ L + L G
Sbjct: 281 KLNLDSNKLTNISQ-ETVNAWISLISITLSG 310
>gi|4503743 flightless I homolog [Homo sapiens]
Length = 1269
Score = 40.0 bits (92), Expect = 0.004
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 8/109 (7%)
Query: 79 LDLSDNKLEDWHEVSKIVSNVPQLEFLNLSSNPLNLSVLERTCAGSFSGVRKLVLNNSKA 138
L+LS N++ E+S + +E LNLS N L S+ C S ++KL LN++K
Sbjct: 251 LNLSSNQIT---ELSLCIDQWVHVETLNLSRNQLT-SLPSAIC--KLSKLKKLYLNSNKL 304
Query: 139 SWETVHMILQELPDLEELFLCLNDYETVSCPSIC-CHSLKLLHITDNNL 186
++ + + +L +LEE N+ E V S+C C L+ L + N+L
Sbjct: 305 DFDGLPSGIGKLTNLEEFMAANNNLELVP-ESLCRCPKLRKLVLNKNHL 352
>gi|153791507 leucine rich repeat neuronal 3 [Homo sapiens]
Length = 708
Score = 39.7 bits (91), Expect = 0.005
Identities = 50/214 (23%), Positives = 89/214 (41%), Gaps = 45/214 (21%)
Query: 44 KDRLNLPSVLVLNSCGITCAGDEKEIAAFCAHVSELDLSDNKLEDWHEVSKIVSNVPQLE 103
K +NL S+++ GI ++ + DN+L V+ + V L+
Sbjct: 209 KPLINLRSLVI---AGINLTEIPDNALVGLENLESISFYDNRLIKVPHVA--LQKVVNLK 263
Query: 104 FLNLSSNPLNLSVLERTCAGSFSG---VRKLVLNNSKASWETVHMILQELPDLEELFLCL 160
FL+L+ NP+N R G FS +++L +NN + + LPDL ++
Sbjct: 264 FLDLNKNPIN-----RIRRGDFSNMLHLKELGINNMPELISIDSLAVDNLPDLRKI---- 314
Query: 161 NDYETVSCPSICCHSLKLLHITDNNLQDWTEIRKLGVMFPSLDTLVLANNHLNAIEEPDD 220
E + P +L +I N P L++L+L +N L+A+
Sbjct: 315 ---EATNNP-------RLSYIHPNAF----------FRLPKLESLMLNSNALSALYH--- 351
Query: 221 SLARLFPNLRSISLHKSGLQ-----SWEDIDKLN 249
PNL+ IS+H + ++ W +++K N
Sbjct: 352 GTIESLPNLKEISIHSNPIRCDCVIRWMNMNKTN 385
>gi|153792651 leucine rich repeat neuronal 3 [Homo sapiens]
Length = 708
Score = 39.7 bits (91), Expect = 0.005
Identities = 50/214 (23%), Positives = 89/214 (41%), Gaps = 45/214 (21%)
Query: 44 KDRLNLPSVLVLNSCGITCAGDEKEIAAFCAHVSELDLSDNKLEDWHEVSKIVSNVPQLE 103
K +NL S+++ GI ++ + DN+L V+ + V L+
Sbjct: 209 KPLINLRSLVI---AGINLTEIPDNALVGLENLESISFYDNRLIKVPHVA--LQKVVNLK 263
Query: 104 FLNLSSNPLNLSVLERTCAGSFSG---VRKLVLNNSKASWETVHMILQELPDLEELFLCL 160
FL+L+ NP+N R G FS +++L +NN + + LPDL ++
Sbjct: 264 FLDLNKNPIN-----RIRRGDFSNMLHLKELGINNMPELISIDSLAVDNLPDLRKI---- 314
Query: 161 NDYETVSCPSICCHSLKLLHITDNNLQDWTEIRKLGVMFPSLDTLVLANNHLNAIEEPDD 220
E + P +L +I N P L++L+L +N L+A+
Sbjct: 315 ---EATNNP-------RLSYIHPNAF----------FRLPKLESLMLNSNALSALYH--- 351
Query: 221 SLARLFPNLRSISLHKSGLQ-----SWEDIDKLN 249
PNL+ IS+H + ++ W +++K N
Sbjct: 352 GTIESLPNLKEISIHSNPIRCDCVIRWMNMNKTN 385
>gi|153792227 leucine rich repeat neuronal 3 [Homo sapiens]
Length = 708
Score = 39.7 bits (91), Expect = 0.005
Identities = 50/214 (23%), Positives = 89/214 (41%), Gaps = 45/214 (21%)
Query: 44 KDRLNLPSVLVLNSCGITCAGDEKEIAAFCAHVSELDLSDNKLEDWHEVSKIVSNVPQLE 103
K +NL S+++ GI ++ + DN+L V+ + V L+
Sbjct: 209 KPLINLRSLVI---AGINLTEIPDNALVGLENLESISFYDNRLIKVPHVA--LQKVVNLK 263
Query: 104 FLNLSSNPLNLSVLERTCAGSFSG---VRKLVLNNSKASWETVHMILQELPDLEELFLCL 160
FL+L+ NP+N R G FS +++L +NN + + LPDL ++
Sbjct: 264 FLDLNKNPIN-----RIRRGDFSNMLHLKELGINNMPELISIDSLAVDNLPDLRKI---- 314
Query: 161 NDYETVSCPSICCHSLKLLHITDNNLQDWTEIRKLGVMFPSLDTLVLANNHLNAIEEPDD 220
E + P +L +I N P L++L+L +N L+A+
Sbjct: 315 ---EATNNP-------RLSYIHPNAF----------FRLPKLESLMLNSNALSALYH--- 351
Query: 221 SLARLFPNLRSISLHKSGLQ-----SWEDIDKLN 249
PNL+ IS+H + ++ W +++K N
Sbjct: 352 GTIESLPNLKEISIHSNPIRCDCVIRWMNMNKTN 385
>gi|31621309 leucine rich repeat containing 6 [Homo sapiens]
Length = 466
Score = 39.3 bits (90), Expect = 0.007
Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Query: 153 LEELFLCLNDYETVSCPSICCHSLKLLHITDNNLQDWTEIRKLGVMFPSLDTLVLANNHL 212
LEEL L + E + C LK+L++ +N + + KL L+ L LA N++
Sbjct: 23 LEELSLHQQEIERLEHIDKWCRDLKILYLQNNLIGKIENVSKL----KKLEYLNLALNNI 78
Query: 213 NAIEEPDDSLARLFPNLRSISLHKSGLQSWEDIDKLNSFPKLEEVRLLGIPLLQPYTTEE 272
IE + L + L + + I L L+E+ L+G P + +
Sbjct: 79 EKIENLEGC-----EELAKLDLTVNFIGELSSIKNLQHNIHLKELFLMGNPCA---SFDH 130
Query: 273 RRKLVIARLPSVSKLNGSVVTDGER 297
R+ V+A LP + L+G + ER
Sbjct: 131 YREFVVATLPQLKWLDGKEIEPSER 155
>gi|50593002 small nuclear ribonucleoprotein polypeptide A' [Homo
sapiens]
Length = 255
Score = 37.7 bits (86), Expect = 0.020
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 8/116 (6%)
Query: 191 EIRKLG--VMFPSLDTLVLANNHLNAIEEPDDSLARLFPNLRSISLHKSGLQSWEDIDKL 248
EIRKL + L TL++ NN + I E L + P L + L + L D+D L
Sbjct: 53 EIRKLDGFPLLRRLKTLLVNNNRICRIGE---GLDQALPCLTELILTNNSLVELGDLDPL 109
Query: 249 NSFPKLEEVRLLGIPLLQPYTTEERRKLVIARLPSVSKLNGSVVTDGEREDSERFF 304
S L + +L P+ + R VI ++P V L+ V ER+++E+ F
Sbjct: 110 ASLKSLTYLSILRNPVTNK---KHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMF 162
>gi|20143971 toll-like receptor 6 [Homo sapiens]
Length = 796
Score = 37.4 bits (85), Expect = 0.026
Identities = 43/175 (24%), Positives = 80/175 (45%), Gaps = 14/175 (8%)
Query: 79 LDLSDNKLEDWHEVSKIVSNVPQLEFLNLSSNPLNLSVLERTCAGSFSGVRKLVLNNSKA 138
L L N L+D +V + ++P LE L++S N L + C + V +V+ N +
Sbjct: 382 LILQKNGLKDLFKVGLMTKDMPSLEILDVSWNSLESGRHKENC----TWVESIVVLNLSS 437
Query: 139 SWETVHMILQELPDLEELFLCLNDYETVSCPSICCHSLKLLHITDNNLQDWTEIRKLGVM 198
+ T + P ++ L L N ++V + +L+ L++ N+L T++ G
Sbjct: 438 NMLTDSVFRCLPPRIKVLDLHSNKIKSVPKQVVKLEALQELNVAFNSL---TDLPGCG-S 493
Query: 199 FPSLDTLVLANNHLNAIEEPDDSLARLFPNLRSISLHKSGLQSWEDIDKLNSFPK 253
F SL L++ + N++ P + +RSI K+G ++ +L F K
Sbjct: 494 FSSLSVLIIDH---NSVSHPSADFFQSCQKMRSI---KAGDNPFQCTCELREFVK 542
>gi|14042939 chromosome 10 open reading frame 11 [Homo sapiens]
Length = 198
Score = 37.4 bits (85), Expect = 0.026
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 17/135 (12%)
Query: 177 KLLHITDNNLQDWTEIRKLGVMFPSLDTLVLANNHLNAIEEPDDSLARLFPNLRSISLHK 236
K L ++ N+ + + L F SL+ L+L NN L DD + P L +++L+K
Sbjct: 3 KYLSLSGNHSSNKRSLEGLSA-FRSLEELILDNNQLG-----DDLVLPGLPRLHTLTLNK 56
Query: 237 SGLQSWEDI-DKLNSF-PKLEEVRLLGI-----PLLQPYTTEERRK----LVIARLPSVS 285
+ + E++ D L P LE + LLG L+ EE K V+ +LP++
Sbjct: 57 NRITDLENLLDHLAEVTPALEYLSLLGNVACPNELVSLEKDEEDYKRYRCFVLYKLPNLK 116
Query: 286 KLNGSVVTDGEREDS 300
L+ VT ERE++
Sbjct: 117 FLDAQKVTRQEREEA 131
>gi|15487670 nuclear RNA export factor 1 isoform 1 [Homo sapiens]
Length = 619
Score = 37.0 bits (84), Expect = 0.034
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 200 PSLDTLVLANNHLNAIEEPDDSLARLFPNLRSISLHKSGLQSWEDIDKLNSFPKLEEVRL 259
P L +L L+NN L +++ S+ + PNL+ ++L + L+S ++DK+ KLEE+ L
Sbjct: 265 PELLSLNLSNNRLYRLDDMS-SIVQKAPNLKILNLSGNELKSERELDKIKGL-KLEELWL 322
Query: 260 LGIPLLQPYTTEERR-KLVIARLPSVSKLNG 289
G L + + + R P + +L+G
Sbjct: 323 DGNSLCDTFRDQSTYISAIRERFPKLLRLDG 353
Score = 33.1 bits (74), Expect = 0.49
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 48 NLPSVLVLNSCGITCAGDEKEIAAFCAHVSELDLSDNKLEDWHEVSKIVSNVPQLEFLNL 107
N+ VL SC A + I + L+LS+N+L ++S IV P L+ LNL
Sbjct: 242 NIDVVLNRRSC---MAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNL 298
Query: 108 SSNPL 112
S N L
Sbjct: 299 SGNEL 303
>gi|41350337 toll-like receptor 1 [Homo sapiens]
Length = 786
Score = 37.0 bits (84), Expect = 0.034
Identities = 43/185 (23%), Positives = 91/185 (49%), Gaps = 19/185 (10%)
Query: 73 CAHVSELD---LSDNKLEDWHEVSKIVSNVPQLEFLNLSSNPLNLSVLERTCAGSFSGVR 129
C H++EL+ L N+L++ +++++ + + L+ L++S N ++ + C+ + S
Sbjct: 368 CGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKS--- 424
Query: 130 KLVLN-NSKASWETVHMILQELPDLEELFLCLNDYETVSCPSICCHSLKLLHITDNNLQD 188
L LN +S +T+ L P ++ L L N +++ + +L+ L++ N+L
Sbjct: 425 LLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIKSIPKQVVKLEALQELNVAFNSL-- 480
Query: 189 WTEIRKLGVMFPSLDTLVLANNHLNAIEEPDDSLARLFPNLRSISLHKSGLQSWEDIDKL 248
T++ G F SL L++ + N++ P + +RSI K+G ++ +L
Sbjct: 481 -TDLPGCG-SFSSLSVLIIDH---NSVSHPSADFFQSCQKMRSI---KAGDNPFQCTCEL 532
Query: 249 NSFPK 253
F K
Sbjct: 533 GEFVK 537
>gi|42822866 ribonuclease/angiogenin inhibitor [Homo sapiens]
Length = 461
Score = 37.0 bits (84), Expect = 0.034
Identities = 47/169 (27%), Positives = 69/169 (40%), Gaps = 25/169 (14%)
Query: 92 VSKIVSNVPQLEFLNLSSNPLNLSVLERTCAGSFSG---VRKLVLNN---SKASWETVHM 145
+S + +P L+ L+LS N L + L+ C G + KL L S AS E +
Sbjct: 105 LSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLAS 164
Query: 146 ILQELPDLEELFLCLNDYETVSCPSIC---------CHSLKL--LHITDNNLQDWTEIRK 194
+L+ PD +EL + ND +C +LKL +T +N +D +
Sbjct: 165 VLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRD---LCG 221
Query: 195 LGVMFPSLDTLVLANNHLNAIEEPDDSLARLFPNLRSISLHKSGLQSWE 243
+ SL L L +N L D +A L P L S L WE
Sbjct: 222 IVASKASLRELALGSNKLG-----DVGMAELCPGLLHPSSRLRTLWIWE 265
>gi|42822864 ribonuclease/angiogenin inhibitor [Homo sapiens]
Length = 461
Score = 37.0 bits (84), Expect = 0.034
Identities = 47/169 (27%), Positives = 69/169 (40%), Gaps = 25/169 (14%)
Query: 92 VSKIVSNVPQLEFLNLSSNPLNLSVLERTCAGSFSG---VRKLVLNN---SKASWETVHM 145
+S + +P L+ L+LS N L + L+ C G + KL L S AS E +
Sbjct: 105 LSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLAS 164
Query: 146 ILQELPDLEELFLCLNDYETVSCPSIC---------CHSLKL--LHITDNNLQDWTEIRK 194
+L+ PD +EL + ND +C +LKL +T +N +D +
Sbjct: 165 VLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRD---LCG 221
Query: 195 LGVMFPSLDTLVLANNHLNAIEEPDDSLARLFPNLRSISLHKSGLQSWE 243
+ SL L L +N L D +A L P L S L WE
Sbjct: 222 IVASKASLRELALGSNKLG-----DVGMAELCPGLLHPSSRLRTLWIWE 265
>gi|42822868 ribonuclease/angiogenin inhibitor [Homo sapiens]
Length = 461
Score = 37.0 bits (84), Expect = 0.034
Identities = 47/169 (27%), Positives = 69/169 (40%), Gaps = 25/169 (14%)
Query: 92 VSKIVSNVPQLEFLNLSSNPLNLSVLERTCAGSFSG---VRKLVLNN---SKASWETVHM 145
+S + +P L+ L+LS N L + L+ C G + KL L S AS E +
Sbjct: 105 LSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLAS 164
Query: 146 ILQELPDLEELFLCLNDYETVSCPSIC---------CHSLKL--LHITDNNLQDWTEIRK 194
+L+ PD +EL + ND +C +LKL +T +N +D +
Sbjct: 165 VLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRD---LCG 221
Query: 195 LGVMFPSLDTLVLANNHLNAIEEPDDSLARLFPNLRSISLHKSGLQSWE 243
+ SL L L +N L D +A L P L S L WE
Sbjct: 222 IVASKASLRELALGSNKLG-----DVGMAELCPGLLHPSSRLRTLWIWE 265
>gi|42822870 ribonuclease/angiogenin inhibitor [Homo sapiens]
Length = 461
Score = 37.0 bits (84), Expect = 0.034
Identities = 47/169 (27%), Positives = 69/169 (40%), Gaps = 25/169 (14%)
Query: 92 VSKIVSNVPQLEFLNLSSNPLNLSVLERTCAGSFSG---VRKLVLNN---SKASWETVHM 145
+S + +P L+ L+LS N L + L+ C G + KL L S AS E +
Sbjct: 105 LSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLAS 164
Query: 146 ILQELPDLEELFLCLNDYETVSCPSIC---------CHSLKL--LHITDNNLQDWTEIRK 194
+L+ PD +EL + ND +C +LKL +T +N +D +
Sbjct: 165 VLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRD---LCG 221
Query: 195 LGVMFPSLDTLVLANNHLNAIEEPDDSLARLFPNLRSISLHKSGLQSWE 243
+ SL L L +N L D +A L P L S L WE
Sbjct: 222 IVASKASLRELALGSNKLG-----DVGMAELCPGLLHPSSRLRTLWIWE 265
>gi|42822874 ribonuclease/angiogenin inhibitor [Homo sapiens]
Length = 461
Score = 37.0 bits (84), Expect = 0.034
Identities = 47/169 (27%), Positives = 69/169 (40%), Gaps = 25/169 (14%)
Query: 92 VSKIVSNVPQLEFLNLSSNPLNLSVLERTCAGSFSG---VRKLVLNN---SKASWETVHM 145
+S + +P L+ L+LS N L + L+ C G + KL L S AS E +
Sbjct: 105 LSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLAS 164
Query: 146 ILQELPDLEELFLCLNDYETVSCPSIC---------CHSLKL--LHITDNNLQDWTEIRK 194
+L+ PD +EL + ND +C +LKL +T +N +D +
Sbjct: 165 VLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRD---LCG 221
Query: 195 LGVMFPSLDTLVLANNHLNAIEEPDDSLARLFPNLRSISLHKSGLQSWE 243
+ SL L L +N L D +A L P L S L WE
Sbjct: 222 IVASKASLRELALGSNKLG-----DVGMAELCPGLLHPSSRLRTLWIWE 265
>gi|42794608 ribonuclease/angiogenin inhibitor [Homo sapiens]
Length = 461
Score = 37.0 bits (84), Expect = 0.034
Identities = 47/169 (27%), Positives = 69/169 (40%), Gaps = 25/169 (14%)
Query: 92 VSKIVSNVPQLEFLNLSSNPLNLSVLERTCAGSFSG---VRKLVLNN---SKASWETVHM 145
+S + +P L+ L+LS N L + L+ C G + KL L S AS E +
Sbjct: 105 LSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLAS 164
Query: 146 ILQELPDLEELFLCLNDYETVSCPSIC---------CHSLKL--LHITDNNLQDWTEIRK 194
+L+ PD +EL + ND +C +LKL +T +N +D +
Sbjct: 165 VLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRD---LCG 221
Query: 195 LGVMFPSLDTLVLANNHLNAIEEPDDSLARLFPNLRSISLHKSGLQSWE 243
+ SL L L +N L D +A L P L S L WE
Sbjct: 222 IVASKASLRELALGSNKLG-----DVGMAELCPGLLHPSSRLRTLWIWE 265
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.135 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,920,884
Number of Sequences: 37866
Number of extensions: 787314
Number of successful extensions: 2417
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 101
Number of HSP's that attempted gapping in prelim test: 2292
Number of HSP's gapped (non-prelim): 198
length of query: 424
length of database: 18,247,518
effective HSP length: 105
effective length of query: 319
effective length of database: 14,271,588
effective search space: 4552636572
effective search space used: 4552636572
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.