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Search of human proteins with 194018431
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|194018431 KIAA1841 protein isoform b [Homo sapiens]
(707 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|194018431 KIAA1841 protein isoform b [Homo sapiens] 1458 0.0
gi|194018433 KIAA1841 protein isoform a [Homo sapiens] 1399 0.0
gi|7661936 scaffold attachment factor B2 [Homo sapiens] 42 0.003
gi|221219020 NYD-SP11 protein [Homo sapiens] 41 0.004
gi|40255052 IQ motif containing with AAA domain 1 [Homo sapiens] 40 0.007
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 40 0.010
gi|104526627 triadin [Homo sapiens] 39 0.013
gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo sa... 38 0.028
gi|55741709 RNA binding motif protein 25 [Homo sapiens] 38 0.028
gi|239757964 PREDICTED: hypothetical protein [Homo sapiens] 38 0.028
gi|148746195 trichohyalin [Homo sapiens] 38 0.028
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 38 0.037
gi|239750213 PREDICTED: hypothetical protein [Homo sapiens] 37 0.063
gi|239745079 PREDICTED: Putative golgin subfamily A member 6-lik... 37 0.063
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ... 37 0.063
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [... 37 0.063
gi|33391150 nucleoplasmin 2 [Homo sapiens] 37 0.063
gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo sa... 37 0.082
gi|119943102 CREB binding protein isoform b [Homo sapiens] 37 0.082
gi|119943104 CREB binding protein isoform a [Homo sapiens] 37 0.082
gi|197927454 DEK oncogene isoform 2 [Homo sapiens] 37 0.082
gi|4503249 DEK oncogene isoform 1 [Homo sapiens] 37 0.082
gi|118421089 chromodomain helicase DNA binding protein 2 isoform... 37 0.082
gi|110611184 chromodomain helicase DNA binding protein 2 isoform... 37 0.082
gi|118600967 shroom family member 4 [Homo sapiens] 36 0.11
gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo sap... 36 0.14
gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo sap... 36 0.14
gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo sap... 36 0.14
gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo sapi... 36 0.14
gi|21396500 HIRA interacting protein 3 [Homo sapiens] 36 0.14
>gi|194018431 KIAA1841 protein isoform b [Homo sapiens]
Length = 707
Score = 1458 bits (3774), Expect = 0.0
Identities = 707/707 (100%), Positives = 707/707 (100%)
Query: 1 MSRGYSENNNFLNNNNQMVLDMILYPLIGIPQTINWETIARLVPGLTPKECAKRFDELKS 60
MSRGYSENNNFLNNNNQMVLDMILYPLIGIPQTINWETIARLVPGLTPKECAKRFDELKS
Sbjct: 1 MSRGYSENNNFLNNNNQMVLDMILYPLIGIPQTINWETIARLVPGLTPKECAKRFDELKS 60
Query: 61 SGSSPVDNQYNSLMAAGESPVETLATYIKSSLLDIHGEFQETPVGHDAVSKTGRHSIAST 120
SGSSPVDNQYNSLMAAGESPVETLATYIKSSLLDIHGEFQETPVGHDAVSKTGRHSIAST
Sbjct: 61 SGSSPVDNQYNSLMAAGESPVETLATYIKSSLLDIHGEFQETPVGHDAVSKTGRHSIAST 120
Query: 121 RNCSSESENCTTHNGGEMTEESEGPNMVIHVCDEAKNLKEDFTCPRDLLISEMKYFAEYL 180
RNCSSESENCTTHNGGEMTEESEGPNMVIHVCDEAKNLKEDFTCPRDLLISEMKYFAEYL
Sbjct: 121 RNCSSESENCTTHNGGEMTEESEGPNMVIHVCDEAKNLKEDFTCPRDLLISEMKYFAEYL 180
Query: 181 SMDAQRWEEVDISVHCDVHIFNWLIKYIKRNTKENKDCEMPTLEPGNVISILISSEFLKM 240
SMDAQRWEEVDISVHCDVHIFNWLIKYIKRNTKENKDCEMPTLEPGNVISILISSEFLKM
Sbjct: 181 SMDAQRWEEVDISVHCDVHIFNWLIKYIKRNTKENKDCEMPTLEPGNVISILISSEFLKM 240
Query: 241 DSLVEQCIQYCHKNMNAIVATPCNMNCINANLLTRIADLFSHNEVDDLKDKKDKFKSKLF 300
DSLVEQCIQYCHKNMNAIVATPCNMNCINANLLTRIADLFSHNEVDDLKDKKDKFKSKLF
Sbjct: 241 DSLVEQCIQYCHKNMNAIVATPCNMNCINANLLTRIADLFSHNEVDDLKDKKDKFKSKLF 300
Query: 301 CKKIERLFDPEYLNPDSRSNAATLYRCCLCKKLLTKETERRIPCIPGKINVDRRGNIVYI 360
CKKIERLFDPEYLNPDSRSNAATLYRCCLCKKLLTKETERRIPCIPGKINVDRRGNIVYI
Sbjct: 301 CKKIERLFDPEYLNPDSRSNAATLYRCCLCKKLLTKETERRIPCIPGKINVDRRGNIVYI 360
Query: 361 HIRDKTWDVHEYLNSLFEELKSWRDVYWRLWGTINWLTCSRCYQAFLCIEFSHCQYHSET 420
HIRDKTWDVHEYLNSLFEELKSWRDVYWRLWGTINWLTCSRCYQAFLCIEFSHCQYHSET
Sbjct: 361 HIRDKTWDVHEYLNSLFEELKSWRDVYWRLWGTINWLTCSRCYQAFLCIEFSHCQYHSET 420
Query: 421 VVYPTAASSLNTVGTGIYPCCNQKVLRFDPTQLTKGCKVRDHMVTLRDQGEGGDLPSCPT 480
VVYPTAASSLNTVGTGIYPCCNQKVLRFDPTQLTKGCKVRDHMVTLRDQGEGGDLPSCPT
Sbjct: 421 VVYPTAASSLNTVGTGIYPCCNQKVLRFDPTQLTKGCKVRDHMVTLRDQGEGGDLPSCPT 480
Query: 481 ARMLDDLHKYRDVIVVPFSKDTVSDVGVGLCDEKGIECDVLLEPNTPWGPKTGELNAFLS 540
ARMLDDLHKYRDVIVVPFSKDTVSDVGVGLCDEKGIECDVLLEPNTPWGPKTGELNAFLS
Sbjct: 481 ARMLDDLHKYRDVIVVPFSKDTVSDVGVGLCDEKGIECDVLLEPNTPWGPKTGELNAFLS 540
Query: 541 LKNWTLQLKQQSLFSEEEEYTTGSEVTEDEVGDEEEVSKKQRKKEKPKKFTRQPKKQVSS 600
LKNWTLQLKQQSLFSEEEEYTTGSEVTEDEVGDEEEVSKKQRKKEKPKKFTRQPKKQVSS
Sbjct: 541 LKNWTLQLKQQSLFSEEEEYTTGSEVTEDEVGDEEEVSKKQRKKEKPKKFTRQPKKQVSS 600
Query: 601 PCAQRKEKALEKSASRDVSPFVMSMQKNKWDATRSLRFNQDAQREDDQRRMTEITGHLIK 660
PCAQRKEKALEKSASRDVSPFVMSMQKNKWDATRSLRFNQDAQREDDQRRMTEITGHLIK
Sbjct: 601 PCAQRKEKALEKSASRDVSPFVMSMQKNKWDATRSLRFNQDAQREDDQRRMTEITGHLIK 660
Query: 661 MRLGDLDRVKSKEAKETDKLRPRDGTVSKSNRKSGLSSVLLMTVLLC 707
MRLGDLDRVKSKEAKETDKLRPRDGTVSKSNRKSGLSSVLLMTVLLC
Sbjct: 661 MRLGDLDRVKSKEAKETDKLRPRDGTVSKSNRKSGLSSVLLMTVLLC 707
>gi|194018433 KIAA1841 protein isoform a [Homo sapiens]
Length = 718
Score = 1399 bits (3622), Expect = 0.0
Identities = 676/676 (100%), Positives = 676/676 (100%)
Query: 1 MSRGYSENNNFLNNNNQMVLDMILYPLIGIPQTINWETIARLVPGLTPKECAKRFDELKS 60
MSRGYSENNNFLNNNNQMVLDMILYPLIGIPQTINWETIARLVPGLTPKECAKRFDELKS
Sbjct: 1 MSRGYSENNNFLNNNNQMVLDMILYPLIGIPQTINWETIARLVPGLTPKECAKRFDELKS 60
Query: 61 SGSSPVDNQYNSLMAAGESPVETLATYIKSSLLDIHGEFQETPVGHDAVSKTGRHSIAST 120
SGSSPVDNQYNSLMAAGESPVETLATYIKSSLLDIHGEFQETPVGHDAVSKTGRHSIAST
Sbjct: 61 SGSSPVDNQYNSLMAAGESPVETLATYIKSSLLDIHGEFQETPVGHDAVSKTGRHSIAST 120
Query: 121 RNCSSESENCTTHNGGEMTEESEGPNMVIHVCDEAKNLKEDFTCPRDLLISEMKYFAEYL 180
RNCSSESENCTTHNGGEMTEESEGPNMVIHVCDEAKNLKEDFTCPRDLLISEMKYFAEYL
Sbjct: 121 RNCSSESENCTTHNGGEMTEESEGPNMVIHVCDEAKNLKEDFTCPRDLLISEMKYFAEYL 180
Query: 181 SMDAQRWEEVDISVHCDVHIFNWLIKYIKRNTKENKDCEMPTLEPGNVISILISSEFLKM 240
SMDAQRWEEVDISVHCDVHIFNWLIKYIKRNTKENKDCEMPTLEPGNVISILISSEFLKM
Sbjct: 181 SMDAQRWEEVDISVHCDVHIFNWLIKYIKRNTKENKDCEMPTLEPGNVISILISSEFLKM 240
Query: 241 DSLVEQCIQYCHKNMNAIVATPCNMNCINANLLTRIADLFSHNEVDDLKDKKDKFKSKLF 300
DSLVEQCIQYCHKNMNAIVATPCNMNCINANLLTRIADLFSHNEVDDLKDKKDKFKSKLF
Sbjct: 241 DSLVEQCIQYCHKNMNAIVATPCNMNCINANLLTRIADLFSHNEVDDLKDKKDKFKSKLF 300
Query: 301 CKKIERLFDPEYLNPDSRSNAATLYRCCLCKKLLTKETERRIPCIPGKINVDRRGNIVYI 360
CKKIERLFDPEYLNPDSRSNAATLYRCCLCKKLLTKETERRIPCIPGKINVDRRGNIVYI
Sbjct: 301 CKKIERLFDPEYLNPDSRSNAATLYRCCLCKKLLTKETERRIPCIPGKINVDRRGNIVYI 360
Query: 361 HIRDKTWDVHEYLNSLFEELKSWRDVYWRLWGTINWLTCSRCYQAFLCIEFSHCQYHSET 420
HIRDKTWDVHEYLNSLFEELKSWRDVYWRLWGTINWLTCSRCYQAFLCIEFSHCQYHSET
Sbjct: 361 HIRDKTWDVHEYLNSLFEELKSWRDVYWRLWGTINWLTCSRCYQAFLCIEFSHCQYHSET 420
Query: 421 VVYPTAASSLNTVGTGIYPCCNQKVLRFDPTQLTKGCKVRDHMVTLRDQGEGGDLPSCPT 480
VVYPTAASSLNTVGTGIYPCCNQKVLRFDPTQLTKGCKVRDHMVTLRDQGEGGDLPSCPT
Sbjct: 421 VVYPTAASSLNTVGTGIYPCCNQKVLRFDPTQLTKGCKVRDHMVTLRDQGEGGDLPSCPT 480
Query: 481 ARMLDDLHKYRDVIVVPFSKDTVSDVGVGLCDEKGIECDVLLEPNTPWGPKTGELNAFLS 540
ARMLDDLHKYRDVIVVPFSKDTVSDVGVGLCDEKGIECDVLLEPNTPWGPKTGELNAFLS
Sbjct: 481 ARMLDDLHKYRDVIVVPFSKDTVSDVGVGLCDEKGIECDVLLEPNTPWGPKTGELNAFLS 540
Query: 541 LKNWTLQLKQQSLFSEEEEYTTGSEVTEDEVGDEEEVSKKQRKKEKPKKFTRQPKKQVSS 600
LKNWTLQLKQQSLFSEEEEYTTGSEVTEDEVGDEEEVSKKQRKKEKPKKFTRQPKKQVSS
Sbjct: 541 LKNWTLQLKQQSLFSEEEEYTTGSEVTEDEVGDEEEVSKKQRKKEKPKKFTRQPKKQVSS 600
Query: 601 PCAQRKEKALEKSASRDVSPFVMSMQKNKWDATRSLRFNQDAQREDDQRRMTEITGHLIK 660
PCAQRKEKALEKSASRDVSPFVMSMQKNKWDATRSLRFNQDAQREDDQRRMTEITGHLIK
Sbjct: 601 PCAQRKEKALEKSASRDVSPFVMSMQKNKWDATRSLRFNQDAQREDDQRRMTEITGHLIK 660
Query: 661 MRLGDLDRVKSKEAKE 676
MRLGDLDRVKSKEAKE
Sbjct: 661 MRLGDLDRVKSKEAKE 676
>gi|7661936 scaffold attachment factor B2 [Homo sapiens]
Length = 953
Score = 41.6 bits (96), Expect = 0.003
Identities = 32/148 (21%), Positives = 69/148 (46%), Gaps = 13/148 (8%)
Query: 547 QLKQQSLFSEEEEYTTGSEVTEDEVGDEEEVSKKQRKKEKPKKFTRQPKKQVSSPCAQRK 606
++K++ L S + ++ ++ + + EE++ KK+ K KP+ ++ K Q
Sbjct: 499 EVKKEKLSSVDRHHSVEIKIEKTVIKKEEKIEKKEEK--KPEDIKKEEKDQDELKPGPTN 556
Query: 607 EKALEKSASRDVSPFVMSMQKNKWDATRSLRF----------NQDAQREDDQRRMTEITG 656
+ KS SR + V+ M K+K + S++ +QD + E ++R
Sbjct: 557 RSRVTKSGSRGMERTVV-MDKSKGEPVISVKTTSRSKERSSKSQDRKSESKEKRDILSFD 615
Query: 657 HLIKMRLGDLDRVKSKEAKETDKLRPRD 684
+ + R + R + +E +ET++ R R+
Sbjct: 616 KIKEQRERERQRQREREIRETERRRERE 643
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 40.8 bits (94), Expect = 0.004
Identities = 23/81 (28%), Positives = 44/81 (54%)
Query: 549 KQQSLFSEEEEYTTGSEVTEDEVGDEEEVSKKQRKKEKPKKFTRQPKKQVSSPCAQRKEK 608
KQ+SL SEEEE E E+E EEE +K+ ++ + K+ ++ +++ ++KE+
Sbjct: 2239 KQESLSSEEEEEREEEEEREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEE 2298
Query: 609 ALEKSASRDVSPFVMSMQKNK 629
EK + +MS ++ +
Sbjct: 2299 VQEKEEVFEEKEEIMSEEETE 2319
Score = 32.7 bits (73), Expect = 1.2
Identities = 33/163 (20%), Positives = 70/163 (42%), Gaps = 14/163 (8%)
Query: 542 KNWTLQLKQQSLFSEEEEYTTGSEVTEDEVGDEEEVSKKQRKKEKPKKFTRQPKKQVSSP 601
+N ++ + +EEE T EV+ + E++V+++QR ++ K+ R +K+
Sbjct: 1526 ENMLSSKSKEQQYKDEEEVTLEEEVSREGEEKEQQVTEEQRHIQEEHKWARIHRKRAR-- 1583
Query: 602 CAQRKEKALEKSASRDVSPFVMS----MQKNKWDATRSLRFNQD----AQREDDQRRMTE 653
A++K E+ +++ Q+ + A ++ QD AQ E + E
Sbjct: 1584 -AEKKRAQEERKLAQEEEKLAQEERQLAQEERKLAQAYVKITQDDREMAQAEGKFAQKEE 1642
Query: 654 I---TGHLIKMRLGDLDRVKSKEAKETDKLRPRDGTVSKSNRK 693
G + L + + K AK+ +K+ + ++K K
Sbjct: 1643 TLAQRGEKLSQEAEKLAQKRKKLAKKWEKVAREEEKLAKKGGK 1685
Score = 30.8 bits (68), Expect = 4.5
Identities = 22/88 (25%), Positives = 40/88 (45%)
Query: 512 DEKGIECDVLLEPNTPWGPKTGELNAFLSLKNWTLQLKQQSLFSEEEEYTTGSEVTEDEV 571
+E+G E V E K + + K + K++ + EE E + E E+
Sbjct: 2272 EEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETESLSDEEEEEESC 2331
Query: 572 GDEEEVSKKQRKKEKPKKFTRQPKKQVS 599
EEEV +++ +K K+F Q +++ S
Sbjct: 2332 SLEEEVDREKEILKKEKQFKLQEQRRKS 2359
>gi|40255052 IQ motif containing with AAA domain 1 [Homo sapiens]
Length = 822
Score = 40.0 bits (92), Expect = 0.007
Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 14/144 (9%)
Query: 562 TGSEVTEDEVGDEEEVSKKQRKKEKPKKFTRQPKKQVSSPCAQRKEKALEKSASRDVSP- 620
T +V ED + ++EE K ++KK+K +K ++ KKQ KEK E+ +SP
Sbjct: 334 TIQQVIEDIIANQEEEEKNKKKKKKKEKQPKKAKKQKKG----TKEKNKEEDEKWKMSPS 389
Query: 621 -FVMSMQ------KNKW-DATRSLRFNQDAQREDDQRRMTEITGHLIKMRLGDLDRVKSK 672
F+ +M+ K W S F+QD E + + I++++ +L R + K
Sbjct: 390 LFLPAMKEGCNAYKEIWMKKDESWNFSQDYDPELIKEEKRKELQSEIRIQVDELMRQELK 449
Query: 673 EAK-ETDKLRPRDGTVSKSNRKSG 695
K D+ R R K K G
Sbjct: 450 NLKLAVDRERERPVKAGKKKDKKG 473
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 39.7 bits (91), Expect = 0.010
Identities = 32/140 (22%), Positives = 65/140 (46%), Gaps = 18/140 (12%)
Query: 555 SEEEEYTTGSEVTEDEVGDEEEVSKKQRKKEKPKKFTRQPKKQVSSPCAQRKEKALEKSA 614
+ EE+ T + +D GD+++ KK++K EK +K ++ KK S + ++AL K
Sbjct: 294 ASEEKAETPTAAEDDNEGDKKKKDKKKKKGEKEEK-EKEKKKGPSKATVKAMQEALAKLK 352
Query: 615 SRDVSPFVMSMQKNKWDATRSLRFNQDAQREDDQRRMTEITGHLIKMRLGDLDRVKSKEA 674
+ QK + + +A+R++++R E +R K KE
Sbjct: 353 EEE------ERQKREEEERIKRLEELEAKRKEEERLEQE-----------KRERKKQKEK 395
Query: 675 KETDKLRPRDGTVSKSNRKS 694
+ ++L+ ++KS R++
Sbjct: 396 ERKERLKKEGKLLTKSQREA 415
Score = 31.6 bits (70), Expect = 2.6
Identities = 39/162 (24%), Positives = 63/162 (38%), Gaps = 35/162 (21%)
Query: 556 EEEEYTTGSEVTEDEVGD------EEEVSKKQRKKEKPKKFTRQPKKQVSSPCAQRKEKA 609
EEEE SE E+E G+ +EE K +K+ K ++P K++SS
Sbjct: 539 EEEEEDEESEEEEEEEGESEGSEGDEEDEKVSDEKDSGKTLDKKPSKEMSSD-------- 590
Query: 610 LEKSASRDVSPFVMSMQKNKWDATRSLRFNQDAQREDDQRRM-------TEITGHLIKMR 662
S + D T+ R A+R ++RR+ TE I
Sbjct: 591 --------------SEYDSDDDRTKEERAYDKAKRRIEKRRLEHSKNVNTEKLRAPIICV 636
Query: 663 LGDLDRVKSKEAKETDKLRPRDGTVSKSNRKSGLSSVLLMTV 704
LG +D K+K + +DG ++ G ++V L +
Sbjct: 637 LGHVDTGKTKILDKLRHTHVQDGEAGGITQQIGATNVPLEAI 678
>gi|104526627 triadin [Homo sapiens]
Length = 729
Score = 39.3 bits (90), Expect = 0.013
Identities = 33/153 (21%), Positives = 68/153 (44%), Gaps = 10/153 (6%)
Query: 542 KNWTLQLKQQSLFSEEEEYTTGSEVTEDEVGDEEEVSKKQRKKEKPKKFTRQPKKQVSSP 601
K T+++ Q+ ++++E S+ T+ E+ KKQ KKEK + + PKK+ S P
Sbjct: 359 KQGTVKIAAQAA-AKKDEKKEDSKKTKKPAEVEQPKGKKQEKKEKHVEPAKSPKKEHSVP 417
Query: 602 CAQRKEKALEKSASRDVSPFVMSMQKNKWDATRSLRFNQDAQREDDQRRMTEITGHLIKM 661
++ + E++ + + K + + Q+ ++E + T ++K
Sbjct: 418 SDKQVKAKTERAKEEIGAVSIKKAVPGKKEEKTTKTVEQEIRKEKSGK-----TSSILK- 471
Query: 662 RLGDLDRVKSKEAKETDKLRPRDGTVSKSNRKS 694
D + +K KE K L+ ++ K + S
Sbjct: 472 ---DKEPIKGKEEKVPASLKEKEPETKKDEKMS 501
Score = 38.9 bits (89), Expect = 0.017
Identities = 34/150 (22%), Positives = 65/150 (43%), Gaps = 12/150 (8%)
Query: 555 SEEEEYTTGSEVTEDEVGDEEEVSKKQRKKEKPKKFTRQPKKQVSSPCAQR-----KEKA 609
SE+EE G E T+ DE + KK+ K+K +K +P++++ + + KEK
Sbjct: 116 SEDEEDDDGDEDTDKGEIDEPPLRKKEIHKDKTEK-QEKPERKIQTKVTHKEKEKGKEKV 174
Query: 610 LEKSASRDVSPFVMSMQKNKWDATRSLRFNQDAQR---EDDQRRMTEITG---HLIKMRL 663
EK + ++K + T++L Q + + +++ E+ G +K
Sbjct: 175 REKEKPEKKATHKEKIEKKEKPETKTLAKEQKKAKTAEKSEEKTKKEVKGGKQEKVKQTA 234
Query: 664 GDLDRVKSKEAKETDKLRPRDGTVSKSNRK 693
+ V+ +K +K VSK +K
Sbjct: 235 AKVKEVQKTPSKPKEKEDKEKAAVSKHEQK 264
>gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 750
Score = 38.1 bits (87), Expect = 0.028
Identities = 25/146 (17%), Positives = 68/146 (46%), Gaps = 9/146 (6%)
Query: 549 KQQSLFSEEEEYTTGSEVTEDEVGDEEEVSKKQRKKEKPKKFTRQPKKQVSSPCAQRKEK 608
+Q+ + E+EE E+++ ++E++ +++ K+++ +K Q K+Q R+E+
Sbjct: 381 RQEEMMWEKEEKI---RELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEE 437
Query: 609 ALEKSASRDVSPFVMSMQKNKWDATRSLRFNQDAQREDDQRRMTEITGHLIKM-RLGDLD 667
+ + + + +K W + + + E+ ++ E+ K+ ++
Sbjct: 438 KIREQEEK-----IREQEKKMWRQEEKIHEQEKIREEEKRQEQEEMWRQEEKIHEQEEIW 492
Query: 668 RVKSKEAKETDKLRPRDGTVSKSNRK 693
R K K ++ +K+R ++ V + K
Sbjct: 493 RQKEKMHEQEEKIRKQEEKVWRQEEK 518
Score = 31.6 bits (70), Expect = 2.6
Identities = 25/151 (16%), Positives = 66/151 (43%), Gaps = 18/151 (11%)
Query: 549 KQQSLFSEEEEYTTGSEVT----EDEVGDEEEVSKKQRKKEKPKKFTRQPKKQVSSPCAQ 604
+Q+ E+EE E E+++ ++EE+ +++ K + +K + K+Q
Sbjct: 514 RQEEKIREQEEKIREQEEKMWRQEEKIREQEEMWREEEKMHEQEKIWEEEKRQEQEDKMW 573
Query: 605 RKEKALEKSASRDVSPFVMSMQKNKWDATRSLRFNQDAQREDDQRRMTEITGHLIKMRLG 664
R+E+ + + ++ W +R Q+ +R++ + +M + I+ +
Sbjct: 574 RQEEKIRE------------QEEKVWRQEEKIR-EQEEKRQEQEEKMWK-QEEKIREQEE 619
Query: 665 DLDRVKSKEAKETDKLRPRDGTVSKSNRKSG 695
+ + K ++ +K+R ++ + K G
Sbjct: 620 KIQEQEEKIREQEEKIREQEEMTQEQEEKMG 650
>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
Length = 843
Score = 38.1 bits (87), Expect = 0.028
Identities = 31/137 (22%), Positives = 64/137 (46%), Gaps = 3/137 (2%)
Query: 549 KQQSLFSEEEEYTTGSEVTEDEVGDEEEVSKKQRKKEKPKKFTRQPKKQVSSPCAQRKEK 608
K++ +E E E + E +++R++EK K+ R+ ++ + +++
Sbjct: 300 KERQEIEKERRERERERERERERREREREREREREREKEKERERERERDRDRDRTKERDR 359
Query: 609 ALEKSASRDVSPFVMSMQKNKWDATRSLRFNQDAQREDDQRRMTEITGHLIKMRLGDLDR 668
++ RD S +NK D +RS ++D +RE ++ R E + R + +R
Sbjct: 360 DRDRERDRD-RDRERSSDRNK-DRSRSREKSRDRERERERERERERERERERERERERER 417
Query: 669 VKSKE-AKETDKLRPRD 684
+ +E +E DK R R+
Sbjct: 418 EREREREREKDKKRDRE 434
Score = 32.3 bits (72), Expect = 1.6
Identities = 31/148 (20%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 557 EEEYTTGSEVTEDEVGDEEEVSKKQRKKEKPKKFTRQPKKQVSSPCAQRKEKALEKSASR 616
E E E + + E +++R++EK KK R+ ++ + + + K EK A+
Sbjct: 398 EREREREREREREREREREREREREREREKDKKRDREEDEEDAYERRKLERKLREKEAAY 457
Query: 617 DVSPFVMSMQKNKWDATRSLRFNQDAQREDDQRRMTEITGHLIKMRLGDL---------- 666
+++ K ++ + ++A+RE+++RR +K L D
Sbjct: 458 QERLKNWEIRERK----KTREYEKEAEREEERRREMAKEAKRLKEFLEDYDDDRDDPKYY 513
Query: 667 ----------DRVKSKEAKETDKLRPRD 684
DR K EA E D+ R ++
Sbjct: 514 RGSALQKRLRDREKEMEADERDRKREKE 541
>gi|239757964 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 38.1 bits (87), Expect = 0.028
Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 15/174 (8%)
Query: 522 LEPNTPWGPKTGELNAFLSLKNWTLQLKQQSLFSEEE--EYTTGSEVTEDEVGDEEEVSK 579
+E P G L + S ++W L + ++ E E TE E + + +
Sbjct: 41 VEVTIPLDFSRGRLGSQESPRSWGLGQAHKDADGDDRQRERDRVREKTEKERDRDRKRDR 100
Query: 580 KQRKKEKPKKFTRQPKKQVSSPCAQRKEKALEKSASRDVSPFVMSMQKNKWDATRSLRFN 639
++R+KEK R +KQ + +EK + RD ++ + D R
Sbjct: 101 ERRRKEKETNRNRDREKQTEIERDREREKQKGRERERDRG------RERERDRDREKERE 154
Query: 640 QDAQREDDQRRMTEITGHLIKMRLGDLDRVKSKEAKETDKLRPRDGTVSKSNRK 693
+ +++ D +R TE R D +R K KE +ET++ R R K +
Sbjct: 155 RQTEKDRDGQRETETE------RERDREREKQKE-RETERDRDRQRDTEKERER 201
Score = 33.1 bits (74), Expect = 0.91
Identities = 32/137 (23%), Positives = 57/137 (41%), Gaps = 11/137 (8%)
Query: 557 EEEYTTGSEVTEDEVGDEEEVSKKQRKKEKPKKFTRQPKKQVSSPCAQRKEKALEKSASR 616
E+E +E D + E ++ R++EK K+ R+ ++ KE+ + R
Sbjct: 150 EKERERQTEKDRDGQRETETERERDREREKQKE--RETERDRDRQRDTEKERERQTDRER 207
Query: 617 DVSPFVMSMQKNKWDATRSLRFNQDAQREDDQRRMTEITGHLIKMRLGDLDRVKSKEAKE 676
D ++ K R +++ +RE D+RR + K R + DR K + KE
Sbjct: 208 D--------RQRKTQTERQRETDREGERETDRRRERQRDRDRGKERDRERDR-KEERKKE 258
Query: 677 TDKLRPRDGTVSKSNRK 693
K R ++ K K
Sbjct: 259 RKKERKKERKEKKKEEK 275
Score = 31.2 bits (69), Expect = 3.5
Identities = 25/121 (20%), Positives = 49/121 (40%), Gaps = 1/121 (0%)
Query: 573 DEEEVSKKQRKKEKPKKFTRQPKKQVSSPCAQRKEKALEKSASRDVSPFVMSMQKNKWDA 632
D + +++R+ EK + R+ + + + K+K E RD ++ + D
Sbjct: 146 DRDREKERERQTEKDRDGQRETETERERDREREKQKERETERDRDRQRDTEKERERQTDR 205
Query: 633 TRSLRFNQDAQREDDQRRMTEITGHLIKMRLGDLDRVKSKEAKETDKLRPRDGTVSKSNR 692
R + +R+ + R E + R D DR K ++ +E D+ R K +
Sbjct: 206 ERDRQRKTQTERQRETDREGERETDRRRERQRDRDRGKERD-RERDRKEERKKERKKERK 264
Query: 693 K 693
K
Sbjct: 265 K 265
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 38.1 bits (87), Expect = 0.028
Identities = 34/155 (21%), Positives = 70/155 (45%), Gaps = 11/155 (7%)
Query: 546 LQLKQQSLFSEEEEYTTGSEVTEDEVGDEEEVSKKQRK-------KEKPKKFTRQPKKQV 598
LQ +++ L EE+E + E + +EEE+ +++RK + K+ +P+K+
Sbjct: 1176 LQQEEEQLLREEQEKRR--QERERQYREEEELQRQKRKQRYRDEDQRSDLKWQWEPEKEN 1233
Query: 599 SSPCAQRKEKALEKSASRDVSPFVMSMQKNKWDATRSLRFNQDAQREDDQRRMTEITGHL 658
+ + K E R + + ++++ D L Q+ RE ++RR + H
Sbjct: 1234 AVRDNKVYCKGRENEQFRQLEDSQLRDRQSQQDLQHLLGEQQERDREQERRRWQQRDRHF 1293
Query: 659 IKMRLGDLDRVKSKEAKETDKLRPRDGTVSKSNRK 693
+ L+R + KEAK D+ + + + R+
Sbjct: 1294 PEEE--QLEREEQKEAKRRDRKSQEEKQLLREERE 1326
Score = 33.9 bits (76), Expect = 0.53
Identities = 26/140 (18%), Positives = 63/140 (45%), Gaps = 7/140 (5%)
Query: 549 KQQSLFSEEEEYTTGSEVT----EDEVGDEEEVSKKQRKKEKPKKFTRQPKKQVSSPCAQ 604
+Q +F EEEE T E+E EEE +++ +E+ ++ + ++++ +
Sbjct: 233 RQDRVFQEEEEKEWRKRETVLRKEEEKLQEEEPQRQRELQEEEEQLRKLERQELRR---E 289
Query: 605 RKEKALEKSASRDVSPFVMSMQKNKWDATRSLRFNQDAQREDDQRRMTEITGHLIKMRLG 664
R+E+ ++ R ++ + + R Q+ + + ++RR ++ + R
Sbjct: 290 RQEEEQQQQRLRREQQLRRKQEEERREQQEERREQQERREQQEERREQQLRREQEERREQ 349
Query: 665 DLDRVKSKEAKETDKLRPRD 684
L R + +E +E R ++
Sbjct: 350 QLRREQEEERREQQLRREQE 369
Score = 30.8 bits (68), Expect = 4.5
Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 18/113 (15%)
Query: 542 KNWTLQLKQQSLFSEEEEYTTGSEVT-----EDEVGDEEE-VSKKQRKKEKPKKFTRQPK 595
K+ LQ K++ L EE E E E+E+ EEE + +++R+K + +++ RQ +
Sbjct: 962 KDKKLQQKEEQLLGEEPEKRRRQEREKKYREEEELQQEEEQLLREEREKRRRQEWERQYR 1021
Query: 596 KQVSSPCAQRKEKALEKSASRDVSPFVMSMQKNKWDATRSLRFNQDAQREDDQ 648
K+ Q +E+ L + + + + R R ++ Q+E++Q
Sbjct: 1022 KK--DELQQEEEQLLREEREK----------RRLQERERQYREEEELQQEEEQ 1062
Score = 30.0 bits (66), Expect = 7.7
Identities = 27/120 (22%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Query: 542 KNWTLQLKQQSLFSEEEEYTTGSEVT-----EDEVGDEEE-VSKKQRKKEKPKKFTRQ-- 593
K LQ +++ L EE E E E+E+ EEE + +++R+K + ++ RQ
Sbjct: 1082 KEEELQQEEEQLLREEPEKRRRQERERQCREEEELQQEEEQLLREEREKRRRQELERQYR 1141
Query: 594 PKKQVSSPCAQRKEKALEKSASRDVSPFVMSMQKNKWDATRSLRFNQDAQREDDQRRMTE 653
+++V Q + EK +++ ++ + + + LR Q+ +R++ +R+ E
Sbjct: 1142 EEEEVQQEEEQLLREEPEKRRRQELERQYREEEELQQEEEQLLREEQEKRRQERERQYRE 1201
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 37.7 bits (86), Expect = 0.037
Identities = 27/131 (20%), Positives = 62/131 (47%), Gaps = 12/131 (9%)
Query: 549 KQQSLFSEEEEYTTGSEVTEDEVGDEEEVSKKQRKKEKPKKFTRQPKKQVSSPCAQRKEK 608
K++ +EE E T +E E++ G +E K++RK+++ KK T++ +K+ ++K K
Sbjct: 4 KKKKKETEETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRK 63
Query: 609 ALEKSASRDVSPFVMSMQKNKWDATRSLRFNQDAQREDDQRRMTEITGHLIKMRLGDLDR 668
K + ++ + + ++ ++E+ +RR + + R + +
Sbjct: 64 RKRKKKKEE--------EEREEEEEEEEEEKEEEEKEEGRRRKKKKK----RRRKEEEEE 111
Query: 669 VKSKEAKETDK 679
K K ++T K
Sbjct: 112 KKKKRRRKTKK 122
Score = 34.3 bits (77), Expect = 0.41
Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 18/141 (12%)
Query: 549 KQQSLFSEEEEYTTGSEVTEDEVGDEEEVSKKQRKKEKPKKFTRQPKKQVSSPCAQRKEK 608
K++ +E E T +E TE+E E + +K+++K K K+ KK+ + +RKEK
Sbjct: 1 KKKKKKKKETEETEETEETEEEEEKEGKRKEKRKEKRKEKE-----KKKKTKETEKRKEK 55
Query: 609 ALEKSASRDVSPFVMSMQKNKWDATRSLRFNQDAQREDDQRRMTEITGHLIKMRLGDLDR 668
E+ + +K K R ++ + E+++ + G K + +
Sbjct: 56 EEEEKKRK---------RKRKKKKEEEEREEEEEEEEEEKEEEEKEEGRRRKKK----KK 102
Query: 669 VKSKEAKETDKLRPRDGTVSK 689
+ KE +E K + R T K
Sbjct: 103 RRRKEEEEEKKKKRRRKTKKK 123
>gi|239750213 PREDICTED: hypothetical protein [Homo sapiens]
Length = 248
Score = 37.0 bits (84), Expect = 0.063
Identities = 25/119 (21%), Positives = 55/119 (46%), Gaps = 3/119 (2%)
Query: 542 KNWTLQLKQQSLFSEEEEYTTGSEVTEDEVGDEEEVSKKQRKKEKPKKFTRQPKKQVSSP 601
K T + K+++ +++ TT E +++ ++E+ +K+++KEK KK ++ KK+
Sbjct: 52 KKTTTKTKKRTTTTKKTTTTTTKEKEKEKEKEKEKEKEKEKEKEKEKKKKKKKKKKKKKK 111
Query: 602 CAQRKEKALEKSASRDVSPFVMSMQKNKWDATRSLRF---NQDAQREDDQRRMTEITGH 657
K LE ++ +++ + + ++ N R D + T TGH
Sbjct: 112 KLNAKVCGLEIASWSEMTTAAAGEGEEQGSMVQAAGVSISNSSPSRSDGKEGWTRFTGH 170
>gi|239745079 PREDICTED: Putative golgin subfamily A member 6-like
protein 6 [Homo sapiens]
Length = 724
Score = 37.0 bits (84), Expect = 0.063
Identities = 24/146 (16%), Positives = 69/146 (47%), Gaps = 9/146 (6%)
Query: 549 KQQSLFSEEEEYTTGSEVTEDEVGDEEEVSKKQRKKEKPKKFTRQPKKQVSSPCAQRKEK 608
+Q+ + E+EE E+++ ++E++ +++ K+++ +K Q K+Q R+E+
Sbjct: 428 RQEEMMWEKEEKI---RELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEE 484
Query: 609 ALEKSASRDVSPFVMSMQKNKWDATRSLRFNQDAQREDDQRRMTEITGHLIKMR-LGDLD 667
+ + + + ++ W + + + E+ ++ E+ K+R ++
Sbjct: 485 KIREQEEK-----IREQEEKMWRQEEKIHEQEKIREEEKRQEQEEMWRQEEKIREQEEIW 539
Query: 668 RVKSKEAKETDKLRPRDGTVSKSNRK 693
R K K ++ +K+R ++ + + K
Sbjct: 540 RQKEKIHEQEEKIRKQEEKMWRQEEK 565
Score = 32.3 bits (72), Expect = 1.6
Identities = 25/121 (20%), Positives = 54/121 (44%), Gaps = 9/121 (7%)
Query: 547 QLKQQSLFSEEEEYTTGSEVT-----EDEVGDEEEVSKKQRKK--EKPKKFTRQPKK--Q 597
++++Q ++E+E G + E+++ ++EE ++Q +K E+ KK Q +K +
Sbjct: 600 KIREQEEMTQEQEEKMGEQEEKMCEQEEKMQEQEEKMRRQEEKIREQEKKIREQEEKIRE 659
Query: 598 VSSPCAQRKEKALEKSASRDVSPFVMSMQKNKWDATRSLRFNQDAQREDDQRRMTEITGH 657
+++EK E+ M Q+ K + Q+ + + +M E H
Sbjct: 660 QEEMMQEQEEKMWEQEEKMCEQEEKMQEQEEKMRRQEEKMWEQEVRLRQQEEKMQEHQEH 719
Query: 658 L 658
L
Sbjct: 720 L 720
Score = 30.8 bits (68), Expect = 4.5
Identities = 20/106 (18%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 549 KQQSLFSEEEEYTTGSEVT---EDEVGDEEEVSKKQRKK--EKPKKFTRQPKKQVSSPCA 603
+++ + +EE+ E+T E+++G++EE +Q +K E+ +K RQ +K
Sbjct: 590 QEEKIREQEEKIREQEEMTQEQEEKMGEQEEKMCEQEEKMQEQEEKMRRQEEKIRE---- 645
Query: 604 QRKEKALEKSASRDVSPFVMSMQKNKWDATRSLRFNQDAQREDDQR 649
Q K+ ++ R+ + ++ W+ + ++ +E +++
Sbjct: 646 QEKKIREQEEKIREQEEMMQEQEEKMWEQEEKMCEQEEKMQEQEEK 691
>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a
[Homo sapiens]
Length = 624
Score = 37.0 bits (84), Expect = 0.063
Identities = 27/128 (21%), Positives = 60/128 (46%), Gaps = 14/128 (10%)
Query: 567 TEDEVGDEEEVSKKQRKKEKPKKFTRQPKKQVSSPCAQRKEKALEKSASRDVSPFVMSMQ 626
T +++ ++E V +K R+KE+ ++ R+ +K+ + KE+ ++ ++ +
Sbjct: 380 TREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREK 439
Query: 627 KNKWDATRSLRFNQDAQREDDQRRMTEITGHLIKMRLGDLDRVKSKEAKETDKLRPRDGT 686
+++ D + QD ++E ++ R EI D R K K+++ PR
Sbjct: 440 EHEKDRDKEKEKEQDKEKEREKDRSKEI----------DEKRKKDKKSRTP----PRSYN 485
Query: 687 VSKSNRKS 694
S+ +R S
Sbjct: 486 ASRRSRSS 493
Score = 31.2 bits (69), Expect = 3.5
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 12/115 (10%)
Query: 580 KQRKKEKPKKFTRQPKKQVSSPCAQRKEKALEKSASRDVSPFVMSMQKNKWDATRSLRFN 639
+ R ++K ++ ++ P K+ S +RK ++ +S SRD K K R +
Sbjct: 340 RSRSRQKDRRRSKSPHKKRSKSRERRKSRS--RSHSRDKRKDTREKIKEK---ERVKEKD 394
Query: 640 QDAQREDDQRRMTEITGHLIKMRLGDLDRVKSKEA-KETDKLRPRDGTVSKSNRK 693
++ +RE ++ R E K R + DR K +E +E DK + R+ K + K
Sbjct: 395 REKEREREKEREKE------KERGKNKDRDKEREKDREKDKEKDREREREKEHEK 443
>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b
[Homo sapiens]
Length = 508
Score = 37.0 bits (84), Expect = 0.063
Identities = 27/128 (21%), Positives = 60/128 (46%), Gaps = 14/128 (10%)
Query: 567 TEDEVGDEEEVSKKQRKKEKPKKFTRQPKKQVSSPCAQRKEKALEKSASRDVSPFVMSMQ 626
T +++ ++E V +K R+KE+ ++ R+ +K+ + KE+ ++ ++ +
Sbjct: 264 TREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREK 323
Query: 627 KNKWDATRSLRFNQDAQREDDQRRMTEITGHLIKMRLGDLDRVKSKEAKETDKLRPRDGT 686
+++ D + QD ++E ++ R EI D R K K+++ PR
Sbjct: 324 EHEKDRDKEKEKEQDKEKEREKDRSKEI----------DEKRKKDKKSRTP----PRSYN 369
Query: 687 VSKSNRKS 694
S+ +R S
Sbjct: 370 ASRRSRSS 377
Score = 31.2 bits (69), Expect = 3.5
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 12/115 (10%)
Query: 580 KQRKKEKPKKFTRQPKKQVSSPCAQRKEKALEKSASRDVSPFVMSMQKNKWDATRSLRFN 639
+ R ++K ++ ++ P K+ S +RK ++ +S SRD K K R +
Sbjct: 224 RSRSRQKDRRRSKSPHKKRSKSRERRKSRS--RSHSRDKRKDTREKIKEK---ERVKEKD 278
Query: 640 QDAQREDDQRRMTEITGHLIKMRLGDLDRVKSKEA-KETDKLRPRDGTVSKSNRK 693
++ +RE ++ R E K R + DR K +E +E DK + R+ K + K
Sbjct: 279 REKEREREKEREKE------KERGKNKDRDKEREKDREKDKEKDREREREKEHEK 327
>gi|33391150 nucleoplasmin 2 [Homo sapiens]
Length = 214
Score = 37.0 bits (84), Expect = 0.063
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 7/105 (6%)
Query: 520 VLLEPNTPWGPKTGELNAFLSLKNWTLQLKQQSLFSEEEEYTTGSEVTEDEVGDEEEVSK 579
V L P + + G FLS + + + L EEEE G E E+E DE+E +
Sbjct: 96 VQLSPPVTFQLRAGSGPVFLSGQE---RYEASDLTWEEEEEEEGEEEEEEEEDDEDEDAD 152
Query: 580 KQRKKEKPKKFTRQ--PKKQVSSPCAQRKEKALE--KSASRDVSP 620
+++ P K ++ P+KQ S ++ EK E +++ RD SP
Sbjct: 153 ISLEEQSPVKQVKRLVPQKQASVAKKKKLEKEEEEIRASVRDKSP 197
>gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 668
Score = 36.6 bits (83), Expect = 0.082
Identities = 20/126 (15%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 568 EDEVGDEEEVSKKQRKKEKPKKFTRQPKKQVSSPCAQRKEKALEKSASRDVSPFVMSMQK 627
E+++ ++E++ +++ K+++ +K Q K+Q R+E+ + + + + +K
Sbjct: 383 EEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEK-----IREQEK 437
Query: 628 NKWDATRSLRFNQDAQREDDQRRMTEITGHLIKMRLGDLDRVKSKEAKETDKLRPRDGTV 687
W + + + E+ ++ E+ K+R + + ++ E +K+R ++ V
Sbjct: 438 KMWRQEEKIHEQEKIREEEKRQEQEEMWRQEEKIREQEEIWRQKEKMHEQEKIRKQEEKV 497
Query: 688 SKSNRK 693
+ K
Sbjct: 498 WRQEEK 503
Score = 32.7 bits (73), Expect = 1.2
Identities = 24/149 (16%), Positives = 72/149 (48%), Gaps = 8/149 (5%)
Query: 549 KQQSLFSEEEEYTTGSEVTEDEVGDE-EEVSKKQRKKEKPKKFTRQPKKQVSSPCAQRKE 607
+++ ++ +EE+ ++ E+E E EE+ +++ K + ++ RQ +K +++E
Sbjct: 435 QEKKMWRQEEKIHEQEKIREEEKRQEQEEMWRQEEKIREQEEIWRQKEKMHEQEKIRKQE 494
Query: 608 KAL--EKSASRDVSPFVMSMQKNKWDATRSLRFNQDAQREDDQR-RMTEITGHLIKMRLG 664
+ + ++ D + ++ W +R ++ RE +++ R E + ++G
Sbjct: 495 EKVWRQEEKMHDQEEKIREQEEKMWRQEEKIREQEEKIREQEEKIREQEEMMQEQEEKMG 554
Query: 665 DLDRVKSKEAKETDKLRPRDGTVSKSNRK 693
+ + ++ +E +K+R ++ + + K
Sbjct: 555 E----QEEKMQEQEKMRRQEEKIREQEEK 579
>gi|119943102 CREB binding protein isoform b [Homo sapiens]
Length = 2404
Score = 36.6 bits (83), Expect = 0.082
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 547 QLKQQSLFSEEEEYTTGSEVTEDEVGDEEEVSKKQRKKEKPKK--FTRQPKKQVSSP 601
+L+Q+ ++EE T SE TE GD + KK KK K +R KK+ S P
Sbjct: 1517 ELEQEEEERKKEESTAASETTEGSQGDSKNAKKKNNKKTNKNKSSISRANKKKPSMP 1573
>gi|119943104 CREB binding protein isoform a [Homo sapiens]
Length = 2442
Score = 36.6 bits (83), Expect = 0.082
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 547 QLKQQSLFSEEEEYTTGSEVTEDEVGDEEEVSKKQRKKEKPKK--FTRQPKKQVSSP 601
+L+Q+ ++EE T SE TE GD + KK KK K +R KK+ S P
Sbjct: 1555 ELEQEEEERKKEESTAASETTEGSQGDSKNAKKKNNKKTNKNKSSISRANKKKPSMP 1611
>gi|197927454 DEK oncogene isoform 2 [Homo sapiens]
Length = 341
Score = 36.6 bits (83), Expect = 0.082
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 14/91 (15%)
Query: 555 SEEEEYTTGSEVTEDEVGD-EEEVSKKQRKKEKPK-KFTRQPKKQVSSPCAQR------- 605
S+E+E E ++DE + EEE KK K+EKPK K T + KK V S ++
Sbjct: 198 SDEDEKKNKEESSDDEDKESEEEPPKKTAKREKPKQKATSKSKKSVKSANVKKADSSTTK 257
Query: 606 -----KEKALEKSASRDVSPFVMSMQKNKWD 631
+K E S D P + ++K D
Sbjct: 258 KNQNSSKKESESEDSSDDEPLIKKLKKPPTD 288
>gi|4503249 DEK oncogene isoform 1 [Homo sapiens]
Length = 375
Score = 36.6 bits (83), Expect = 0.082
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 14/91 (15%)
Query: 555 SEEEEYTTGSEVTEDEVGD-EEEVSKKQRKKEKPK-KFTRQPKKQVSSPCAQR------- 605
S+E+E E ++DE + EEE KK K+EKPK K T + KK V S ++
Sbjct: 232 SDEDEKKNKEESSDDEDKESEEEPPKKTAKREKPKQKATSKSKKSVKSANVKKADSSTTK 291
Query: 606 -----KEKALEKSASRDVSPFVMSMQKNKWD 631
+K E S D P + ++K D
Sbjct: 292 KNQNSSKKESESEDSSDDEPLIKKLKKPPTD 322
>gi|118421089 chromodomain helicase DNA binding protein 2 isoform 1
[Homo sapiens]
Length = 1828
Score = 36.6 bits (83), Expect = 0.082
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Query: 549 KQQSLFSEEEEYTTGSEVTEDEVGDEEEVSKKQRKKEKPKKFTRQPKKQVSSPCAQRKEK 608
++ S F+ +EE ++GSE + + ++ K+++ K++P + ++ S Q+K K
Sbjct: 117 QEPSRFNIKEEASSGSESGSPKRRGQRQLKKQEKWKQEPSEDEQEQGTSAESEPEQKKVK 176
Query: 609 ALEKSASRDV-SPFVMSMQKNKWDATRSLRFNQDAQREDD 647
A R V P V K + R R QD+ EDD
Sbjct: 177 ARRPVPRRTVPKPRVKKQPKTQ----RGKRKKQDSSDEDD 212
Score = 34.3 bits (77), Expect = 0.41
Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 5/111 (4%)
Query: 547 QLKQQSLFSEEEEYTTGSEVTEDEVGDEEEVSKKQRKKEKPKKFTRQPKKQV-SSPCAQR 605
QLK+Q + +E + E E E +K+ K +P PK +V P QR
Sbjct: 144 QLKKQEKWKQE----PSEDEQEQGTSAESEPEQKKVKARRPVPRRTVPKPRVKKQPKTQR 199
Query: 606 KEKALEKSASRDVSPFVMSMQKNKWDATRSLRFNQDAQREDDQRRMTEITG 656
++ + S+ D ++ + A +++ + +D E D + E+TG
Sbjct: 200 GKRKKQDSSDEDDDDDEAPKRQTRRRAAKNVSYKEDDDFETDSDDLIEMTG 250
>gi|110611184 chromodomain helicase DNA binding protein 2 isoform 2
[Homo sapiens]
Length = 501
Score = 36.6 bits (83), Expect = 0.082
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Query: 549 KQQSLFSEEEEYTTGSEVTEDEVGDEEEVSKKQRKKEKPKKFTRQPKKQVSSPCAQRKEK 608
++ S F+ +EE ++GSE + + ++ K+++ K++P + ++ S Q+K K
Sbjct: 117 QEPSRFNIKEEASSGSESGSPKRRGQRQLKKQEKWKQEPSEDEQEQGTSAESEPEQKKVK 176
Query: 609 ALEKSASRDV-SPFVMSMQKNKWDATRSLRFNQDAQREDD 647
A R V P V K + R R QD+ EDD
Sbjct: 177 ARRPVPRRTVPKPRVKKQPKTQ----RGKRKKQDSSDEDD 212
Score = 34.3 bits (77), Expect = 0.41
Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 5/111 (4%)
Query: 547 QLKQQSLFSEEEEYTTGSEVTEDEVGDEEEVSKKQRKKEKPKKFTRQPKKQV-SSPCAQR 605
QLK+Q + +E + E E E +K+ K +P PK +V P QR
Sbjct: 144 QLKKQEKWKQE----PSEDEQEQGTSAESEPEQKKVKARRPVPRRTVPKPRVKKQPKTQR 199
Query: 606 KEKALEKSASRDVSPFVMSMQKNKWDATRSLRFNQDAQREDDQRRMTEITG 656
++ + S+ D ++ + A +++ + +D E D + E+TG
Sbjct: 200 GKRKKQDSSDEDDDDDEAPKRQTRRRAAKNVSYKEDDDFETDSDDLIEMTG 250
>gi|118600967 shroom family member 4 [Homo sapiens]
Length = 1493
Score = 36.2 bits (82), Expect = 0.11
Identities = 39/166 (23%), Positives = 64/166 (38%), Gaps = 22/166 (13%)
Query: 524 PNTPWGPKTGELNAFLSLKNWTLQLKQQSLFSEEEEYTTGSEVTEDEVGDEEEVSKKQRK 583
P P P + F + + Q +QQ EEEE E E+E +EEE ++ +
Sbjct: 1101 PPRPPPPNWEKYRLFRAAQQQKQQQQQQKQQEEEEE----EEEEEEEEEEEEEEEAEEEE 1156
Query: 584 KEKPKKFTRQPKKQVSSPCAQRKEKALEKSASRDVSPFVMSMQKNKWDATRSLRFNQDAQ 643
+E P ++ + S CA E+ LE+ P + ++S+ Q++
Sbjct: 1157 EELPPQYF---SSETSGSCALNPEEVLEQP-----QPLSFGHLEGSRQGSQSVPAEQESF 1208
Query: 644 REDDQRRMTEITGHL----------IKMRLGDLDRVKSKEAKETDK 679
+ I GHL +G L R +EA E+ K
Sbjct: 1209 ALHSSDFLPPIRGHLGSQPEQAQPPCYYGIGGLWRTSGQEATESAK 1254
>gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo
sapiens]
Length = 1293
Score = 35.8 bits (81), Expect = 0.14
Identities = 28/141 (19%), Positives = 66/141 (46%), Gaps = 8/141 (5%)
Query: 513 EKGIECDVLLEPNTPWGPKTGELNAFLSLKNWTLQLKQQSLFSEEEEYTTGSEVTEDEVG 572
E G D+ L+ TP GP +L K L+ E E ++ E+E
Sbjct: 699 EGGSVWDLPLDTTTP-GPALEQLQQLEKAKAAKLE-------QERREAEMRAKREEEERK 750
Query: 573 DEEEVSKKQRKKEKPKKFTRQPKKQVSSPCAQRKEKALEKSASRDVSPFVMSMQKNKWDA 632
+EE+ ++Q + + ++ + +++ +++E+AL + ++++ ++ +
Sbjct: 751 RQEELRRQQEEILRRQQEEERKRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQ 810
Query: 633 TRSLRFNQDAQREDDQRRMTE 653
+LR ++ +RE+++RR E
Sbjct: 811 EEALRRLEERRREEEERRKQE 831
>gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo
sapiens]
Length = 1320
Score = 35.8 bits (81), Expect = 0.14
Identities = 28/141 (19%), Positives = 66/141 (46%), Gaps = 8/141 (5%)
Query: 513 EKGIECDVLLEPNTPWGPKTGELNAFLSLKNWTLQLKQQSLFSEEEEYTTGSEVTEDEVG 572
E G D+ L+ TP GP +L K L+ E E ++ E+E
Sbjct: 726 EGGSVWDLPLDTTTP-GPALEQLQQLEKAKAAKLE-------QERREAEMRAKREEEERK 777
Query: 573 DEEEVSKKQRKKEKPKKFTRQPKKQVSSPCAQRKEKALEKSASRDVSPFVMSMQKNKWDA 632
+EE+ ++Q + + ++ + +++ +++E+AL + ++++ ++ +
Sbjct: 778 RQEELRRQQEEILRRQQEEERKRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQ 837
Query: 633 TRSLRFNQDAQREDDQRRMTE 653
+LR ++ +RE+++RR E
Sbjct: 838 EEALRRLEERRREEEERRKQE 858
>gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo
sapiens]
Length = 1299
Score = 35.8 bits (81), Expect = 0.14
Identities = 28/141 (19%), Positives = 66/141 (46%), Gaps = 8/141 (5%)
Query: 513 EKGIECDVLLEPNTPWGPKTGELNAFLSLKNWTLQLKQQSLFSEEEEYTTGSEVTEDEVG 572
E G D+ L+ TP GP +L K L+ E E ++ E+E
Sbjct: 705 EGGSVWDLPLDTTTP-GPALEQLQQLEKAKAAKLE-------QERREAEMRAKREEEERK 756
Query: 573 DEEEVSKKQRKKEKPKKFTRQPKKQVSSPCAQRKEKALEKSASRDVSPFVMSMQKNKWDA 632
+EE+ ++Q + + ++ + +++ +++E+AL + ++++ ++ +
Sbjct: 757 RQEELRRQQEEILRRQQEEERKRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQ 816
Query: 633 TRSLRFNQDAQREDDQRRMTE 653
+LR ++ +RE+++RR E
Sbjct: 817 EEALRRLEERRREEEERRKQE 837
>gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo
sapiens]
Length = 1299
Score = 35.8 bits (81), Expect = 0.14
Identities = 28/141 (19%), Positives = 66/141 (46%), Gaps = 8/141 (5%)
Query: 513 EKGIECDVLLEPNTPWGPKTGELNAFLSLKNWTLQLKQQSLFSEEEEYTTGSEVTEDEVG 572
E G D+ L+ TP GP +L K L+ E E ++ E+E
Sbjct: 705 EGGSVWDLPLDTTTP-GPALEQLQQLEKAKAAKLE-------QERREAEMRAKREEEERK 756
Query: 573 DEEEVSKKQRKKEKPKKFTRQPKKQVSSPCAQRKEKALEKSASRDVSPFVMSMQKNKWDA 632
+EE+ ++Q + + ++ + +++ +++E+AL + ++++ ++ +
Sbjct: 757 RQEELRRQQEEILRRQQEEERKRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQ 816
Query: 633 TRSLRFNQDAQREDDQRRMTE 653
+LR ++ +RE+++RR E
Sbjct: 817 EEALRRLEERRREEEERRKQE 837
>gi|21396500 HIRA interacting protein 3 [Homo sapiens]
Length = 556
Score = 35.8 bits (81), Expect = 0.14
Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 15/141 (10%)
Query: 555 SEEEEYTTGSEVTEDEVGDEEEVSKKQRKKEKPKKFTRQPKKQVSSPCAQRKEKALEKSA 614
S+EE +E +EEE K + ++KP KKQ + +++A E+S
Sbjct: 143 SDEERQRDLPAQRGEESSEEEEKGYKGKTRKKP-----VVKKQAPGKASVSRKQAREESE 197
Query: 615 SRDVSPFVMSMQKNKWD-ATRSLRFNQDAQREDDQRRMTEITGHLIKMRLGDLDRVKSKE 673
+ P + +K + + T+SL +E +Q EI + R +++ + +E
Sbjct: 198 ESEAEPVQRTAKKVEGNKGTKSL-------KESEQESEEEILAQKKEQREEEVEEEEKEE 250
Query: 674 AKETDKLRPRDGTVSKSNRKS 694
+E +PR T S RKS
Sbjct: 251 DEEKGDWKPR--TRSNGRRKS 269
Score = 32.0 bits (71), Expect = 2.0
Identities = 42/177 (23%), Positives = 71/177 (40%), Gaps = 28/177 (15%)
Query: 545 TLQLKQQSLFSEEEEYTTGSEVTEDEVGDEEEVS----------------KKQRKKEKPK 588
T LK+ SEEE E E+EV +EE+ +K ++E+
Sbjct: 217 TKSLKESEQESEEEILAQKKEQREEEVEEEEKEEDEEKGDWKPRTRSNGRRKSAREERSC 276
Query: 589 KFTRQPKKQVSSPCAQRKEKALEKS---ASRDVSPFVMSMQKNKWDATRSLRFNQDAQRE 645
K Q K+ + ++ ++K S + RD P V +++ R + ++ E
Sbjct: 277 KQKSQAKRLLGDSDSEEEQKEAASSGDDSGRDREPPVQRKSEDRTQLKGGKRLSGSSEDE 336
Query: 646 DDQRRMTEITGHLIKM-RLG-------DLDR-VKSKEAKETDKLRPRDGTVSKSNRK 693
+D + KM RLG DL+R V EA + ++ + KS+RK
Sbjct: 337 EDSGKGEPTAKGSRKMARLGSTSGEESDLEREVSDSEAGGGPQGERKNRSSKKSSRK 393
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,334,118
Number of Sequences: 37866
Number of extensions: 1271485
Number of successful extensions: 7385
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 137
Number of HSP's that attempted gapping in prelim test: 6250
Number of HSP's gapped (non-prelim): 816
length of query: 707
length of database: 18,247,518
effective HSP length: 109
effective length of query: 598
effective length of database: 14,120,124
effective search space: 8443834152
effective search space used: 8443834152
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.