Guide to the Human Genome
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Name: CXorf36 Sequence: fasta or formatted (182aa) NCBI GI: 193804856
Description:

hypothetical protein LOC79742 isoform 2

Not currently referenced in the text

Other entries for this name:
alt prot {433aa} hypothetical protein LOC79742 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         13           3
 C cysteine            4.4          8           1
 D aspartate           4.4          8           2
 E glutamate           4.9          9           2
 F phenylalanine       4.4          8           2
 G glycine             3.8          7           1
 H histidine           1.1          2           1
 I isoleucine          4.4          8           1
 K lysine              6.0         11           2
 L leucine            13.7         25           3
 M methionine          1.1          2           1
 N asparagine          2.7          5           1
 P proline             6.0         11           2
 Q glutamine           4.4          8           1
 R arginine            7.7         14           2
 S serine             11.5         21           2
 T threonine           3.3          6           1
 V valine              3.8          7           1
 W tryptophan          2.7          5           1
 Y tyrosine            2.2          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC79742 isoform 2 
CXorf36               0.900   hypothetical protein LOC79742 isoform 1 
C3orf58               0.063   hypothetical protein LOC205428 isoform a 
HOXC10                0.011   homeobox C10 
FHAD1                 0.011   forkhead-associated (FHA) phosphopeptide binding do...
RPS4Y1                0.009   ribosomal protein S4, Y-linked 1 Y isoform 
RPS4X                 0.009   ribosomal protein S4, X-linked X isoform 
NIPBL                 0.009   delangin isoform B 
NIPBL                 0.009   delangin isoform A 
SMN2                  0.009   survival of motor neuron 2, centromeric isoform b [H...
SMN2                  0.009   survival of motor neuron 2, centromeric isoform c [H...
SMN2                  0.009   survival of motor neuron 2, centromeric isoform d [H...
SMN2                  0.009   survival of motor neuron 2, centromeric isoform a [H...
SMN1                  0.009   survival of motor neuron 1, telomeric isoform d [Homo...
SMN1                  0.009   survival of motor neuron 1, telomeric isoform b [Hom...
ZNF202                0.009   zinc finger protein 202 
EDEM3                 0.009   ER degradation enhancer, mannosidase alpha-like 3 [...
PRDM16                0.006   PR domain containing 16 isoform 2 
PRDM16                0.006   PR domain containing 16 isoform 1 
RPS4Y2                0.006   ribosomal protein S4, Y-linked 2 
C1orf172              0.006   hypothetical protein LOC126695 
TMEM144               0.006   transmembrane protein 144 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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