Guide to the Human Genome
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Name: TMEM144 Sequence: fasta or formatted (345aa) NCBI GI: 40254921
Description:

transmembrane protein 144

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         30           2
 C cysteine            3.5         12           2
 D aspartate           3.2         11           1
 E glutamate           1.7          6           2
 F phenylalanine       7.8         27           1
 G glycine             8.4         29           2
 H histidine           2.0          7           2
 I isoleucine         10.4         36           2
 K lysine              3.8         13           2
 L leucine            11.0         38           2
 M methionine          2.3          8           1
 N asparagine          4.3         15           2
 P proline             4.1         14           1
 Q glutamine           1.2          4           1
 R arginine            0.9          3           1
 S serine              7.8         27           2
 T threonine           5.5         19           2
 V valine              7.0         24           2
 W tryptophan          3.2         11           1
 Y tyrosine            3.2         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 144 
KIAA1919              0.015   sodium-dependent glucose transporter 1 
DUOXA1                0.012   Numb-interacting protein 
LOC100132369          0.009   PREDICTED: hypothetical protein 
LOC100132369          0.009   PREDICTED: hypothetical protein 
LOC100132369          0.009   PREDICTED: hypothetical protein 
MUC13                 0.007   mucin 13, epithelial transmembrane 
TAAR9                 0.007   trace amine associated receptor 9 
TACR1                 0.006   tachykinin receptor 1 isoform short 
TACR1                 0.006   tachykinin receptor 1 isoform long 
SIDT1                 0.004   SID1 transmembrane family, member 1 
ASXL3                 0.004   additional sex combs like 3 
SLC45A4               0.004   solute carrier family 45, member 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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