Guide to the Human Genome
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Name: CXorf36 Sequence: fasta or formatted (433aa) NCBI GI: 193804854
Description:

hypothetical protein LOC79742 isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {182aa} hypothetical protein LOC79742 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         32           3
 C cysteine            3.5         15           1
 D aspartate           6.7         29           2
 E glutamate           4.2         18           2
 F phenylalanine       5.1         22           2
 G glycine             5.3         23           1
 H histidine           1.2          5           1
 I isoleucine          4.6         20           1
 K lysine              4.4         19           2
 L leucine            13.2         57           3
 M methionine          0.7          3           1
 N asparagine          3.0         13           2
 P proline             6.5         28           2
 Q glutamine           4.8         21           1
 R arginine            7.2         31           2
 S serine              9.9         43           2
 T threonine           2.8         12           1
 V valine              5.1         22           2
 W tryptophan          1.4          6           1
 Y tyrosine            3.2         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC79742 isoform 1 
CXorf36               0.368   hypothetical protein LOC79742 isoform 2 
C3orf58               0.170   hypothetical protein LOC205428 isoform a 
C3orf58               0.053   hypothetical protein LOC205428 isoform b 
MLL3                  0.008   myeloid/lymphoid or mixed-lineage leukemia 3 
C18orf51              0.006   hypothetical protein LOC125704 
RNF112                0.006   ring finger protein 112 
HOXC10                0.005   homeobox C10 
RUSC1                 0.005   RUN and SH3 domain containing 1 isoform b 
RUSC1                 0.005   RUN and SH3 domain containing 1 isoform a 
FHAD1                 0.005   forkhead-associated (FHA) phosphopeptide binding do...
LIX1L                 0.005   Lix1 homolog (mouse) like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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