BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|193788726 CSAG family, member 3 isoform b [Homo sapiens] (110 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|157738682 CSAG family, member 2 isoform 2 [Homo sapiens] 237 2e-63 gi|193788726 CSAG family, member 3 isoform b [Homo sapiens] 237 2e-63 gi|169216494 PREDICTED: similar to CSAG family, member 2 [Homo s... 229 3e-61 gi|169216728 PREDICTED: similar to CSAG family, member 2 [Homo s... 229 3e-61 gi|239757940 PREDICTED: similar to CSAG family, member 2 [Homo s... 227 1e-60 gi|157502216 CSAG family, member 2 isoform 1 [Homo sapiens] 226 3e-60 gi|193788718 CSAG family, member 3 isoform a [Homo sapiens] 226 3e-60 gi|24234760 chondrosarcoma associated gene 1 [Homo sapiens] 140 2e-34 gi|156547151 chondrosarcoma associated gene 1 [Homo sapiens] 140 2e-34 gi|208022661 hypothetical protein LOC57701 [Homo sapiens] 29 0.93 gi|148536825 alpha 1 type IV collagen preproprotein [Homo sapiens] 28 1.2 gi|62739186 complement factor H isoform a precursor [Homo sapiens] 28 1.6 gi|5729929 matrix metalloproteinase 24 preproprotein [Homo sapiens] 28 1.6 gi|150170670 piccolo isoform 2 [Homo sapiens] 28 1.6 gi|150378539 piccolo isoform 1 [Homo sapiens] 28 1.6 gi|57863314 vacuolar protein sorting 37C [Homo sapiens] 28 1.6 gi|7657693 zinc finger protein 324 [Homo sapiens] 28 1.6 gi|40068059 CBF1 interacting corepressor [Homo sapiens] 28 2.1 gi|224586851 sorbin and SH3 domain containing 2 isoform 6 [Homo ... 28 2.1 gi|224586846 sorbin and SH3 domain containing 2 isoform 4 [Homo ... 28 2.1 gi|170784838 secreted frizzled-related protein 4 [Homo sapiens] 28 2.1 gi|239748051 PREDICTED: hypothetical protein XP_002346521 [Homo ... 28 2.1 gi|239741944 PREDICTED: hypothetical protein XP_002342359 [Homo ... 28 2.1 gi|194018495 zinc finger protein 324B [Homo sapiens] 28 2.1 gi|34915994 transducin-like enhancer protein 4 [Homo sapiens] 28 2.1 gi|169217599 PREDICTED: hypothetical protein [Homo sapiens] 27 2.7 gi|239757444 PREDICTED: similar to hCG2019076 [Homo sapiens] 27 2.7 gi|239754026 PREDICTED: hypothetical protein [Homo sapiens] 27 2.7 gi|169216125 PREDICTED: hypothetical protein [Homo sapiens] 27 2.7 gi|239751963 PREDICTED: similar to hCG2019076 [Homo sapiens] 27 2.7 >gi|157738682 CSAG family, member 2 isoform 2 [Homo sapiens] Length = 110 Score = 237 bits (604), Expect = 2e-63 Identities = 110/110 (100%), Positives = 110/110 (100%) Query: 1 MWMGLIQLVEGVKRKDQGFLEKEFYHKTNIKMRCEFLACWPAFTVLGEAWRDQVDWSRLL 60 MWMGLIQLVEGVKRKDQGFLEKEFYHKTNIKMRCEFLACWPAFTVLGEAWRDQVDWSRLL Sbjct: 1 MWMGLIQLVEGVKRKDQGFLEKEFYHKTNIKMRCEFLACWPAFTVLGEAWRDQVDWSRLL 60 Query: 61 RDAGLVKMSRKPRASSPLSNNHPPTPKRFPRQPGREKGPIKEVPGTKGSP 110 RDAGLVKMSRKPRASSPLSNNHPPTPKRFPRQPGREKGPIKEVPGTKGSP Sbjct: 61 RDAGLVKMSRKPRASSPLSNNHPPTPKRFPRQPGREKGPIKEVPGTKGSP 110 >gi|193788726 CSAG family, member 3 isoform b [Homo sapiens] Length = 110 Score = 237 bits (604), Expect = 2e-63 Identities = 110/110 (100%), Positives = 110/110 (100%) Query: 1 MWMGLIQLVEGVKRKDQGFLEKEFYHKTNIKMRCEFLACWPAFTVLGEAWRDQVDWSRLL 60 MWMGLIQLVEGVKRKDQGFLEKEFYHKTNIKMRCEFLACWPAFTVLGEAWRDQVDWSRLL Sbjct: 1 MWMGLIQLVEGVKRKDQGFLEKEFYHKTNIKMRCEFLACWPAFTVLGEAWRDQVDWSRLL 60 Query: 61 RDAGLVKMSRKPRASSPLSNNHPPTPKRFPRQPGREKGPIKEVPGTKGSP 110 RDAGLVKMSRKPRASSPLSNNHPPTPKRFPRQPGREKGPIKEVPGTKGSP Sbjct: 61 RDAGLVKMSRKPRASSPLSNNHPPTPKRFPRQPGREKGPIKEVPGTKGSP 110 >gi|169216494 PREDICTED: similar to CSAG family, member 2 [Homo sapiens] Length = 110 Score = 229 bits (585), Expect = 3e-61 Identities = 105/110 (95%), Positives = 108/110 (98%) Query: 1 MWMGLIQLVEGVKRKDQGFLEKEFYHKTNIKMRCEFLACWPAFTVLGEAWRDQVDWSRLL 60 MW+GLIQLVEGVKRKDQGFLEKEFYHKTNIKMRCEFLACWPAFTVLGEAWRDQVDWSRLL Sbjct: 1 MWIGLIQLVEGVKRKDQGFLEKEFYHKTNIKMRCEFLACWPAFTVLGEAWRDQVDWSRLL 60 Query: 61 RDAGLVKMSRKPRASSPLSNNHPPTPKRFPRQPGREKGPIKEVPGTKGSP 110 RD GLVKMSRKPRASSPLSNNHPPTPKR PRQPGRE+GP+KEVPGTKGSP Sbjct: 61 RDTGLVKMSRKPRASSPLSNNHPPTPKRLPRQPGREQGPVKEVPGTKGSP 110 >gi|169216728 PREDICTED: similar to CSAG family, member 2 [Homo sapiens] Length = 110 Score = 229 bits (585), Expect = 3e-61 Identities = 105/110 (95%), Positives = 108/110 (98%) Query: 1 MWMGLIQLVEGVKRKDQGFLEKEFYHKTNIKMRCEFLACWPAFTVLGEAWRDQVDWSRLL 60 MW+GLIQLVEGVKRKDQGFLEKEFYHKTNIKMRCEFLACWPAFTVLGEAWRDQVDWSRLL Sbjct: 1 MWIGLIQLVEGVKRKDQGFLEKEFYHKTNIKMRCEFLACWPAFTVLGEAWRDQVDWSRLL 60 Query: 61 RDAGLVKMSRKPRASSPLSNNHPPTPKRFPRQPGREKGPIKEVPGTKGSP 110 RD GLVKMSRKPRASSPLSNNHPPTPKR PRQPGRE+GP+KEVPGTKGSP Sbjct: 61 RDTGLVKMSRKPRASSPLSNNHPPTPKRLPRQPGREQGPVKEVPGTKGSP 110 >gi|239757940 PREDICTED: similar to CSAG family, member 2 [Homo sapiens] Length = 110 Score = 227 bits (579), Expect = 1e-60 Identities = 104/110 (94%), Positives = 107/110 (97%) Query: 1 MWMGLIQLVEGVKRKDQGFLEKEFYHKTNIKMRCEFLACWPAFTVLGEAWRDQVDWSRLL 60 MW+GLIQLVEGVKRKDQGFLEKEFYHKTNIKMRCEFLACWPAFTVLGEAWRDQVDWSRLL Sbjct: 1 MWIGLIQLVEGVKRKDQGFLEKEFYHKTNIKMRCEFLACWPAFTVLGEAWRDQVDWSRLL 60 Query: 61 RDAGLVKMSRKPRASSPLSNNHPPTPKRFPRQPGREKGPIKEVPGTKGSP 110 RD GLVKMSRKPRASSPLSNNHPPTPKR PRQPG E+GP+KEVPGTKGSP Sbjct: 61 RDTGLVKMSRKPRASSPLSNNHPPTPKRLPRQPGXEQGPVKEVPGTKGSP 110 >gi|157502216 CSAG family, member 2 isoform 1 [Homo sapiens] Length = 127 Score = 226 bits (576), Expect = 3e-60 Identities = 110/127 (86%), Positives = 110/127 (86%), Gaps = 17/127 (13%) Query: 1 MWMGLIQLVEGVKRKDQGFLEKEFYHKTNIKMRCEFLACWPAFTVLGEAWRDQVDWSRLL 60 MWMGLIQLVEGVKRKDQGFLEKEFYHKTNIKMRCEFLACWPAFTVLGEAWRDQVDWSRLL Sbjct: 1 MWMGLIQLVEGVKRKDQGFLEKEFYHKTNIKMRCEFLACWPAFTVLGEAWRDQVDWSRLL 60 Query: 61 RDAGLVKMSRKPRASSPLSNNHPPTPKR-----------------FPRQPGREKGPIKEV 103 RDAGLVKMSRKPRASSPLSNNHPPTPKR FPRQPGREKGPIKEV Sbjct: 61 RDAGLVKMSRKPRASSPLSNNHPPTPKRRGSGRHPLNPGPEALSKFPRQPGREKGPIKEV 120 Query: 104 PGTKGSP 110 PGTKGSP Sbjct: 121 PGTKGSP 127 >gi|193788718 CSAG family, member 3 isoform a [Homo sapiens] Length = 127 Score = 226 bits (576), Expect = 3e-60 Identities = 110/127 (86%), Positives = 110/127 (86%), Gaps = 17/127 (13%) Query: 1 MWMGLIQLVEGVKRKDQGFLEKEFYHKTNIKMRCEFLACWPAFTVLGEAWRDQVDWSRLL 60 MWMGLIQLVEGVKRKDQGFLEKEFYHKTNIKMRCEFLACWPAFTVLGEAWRDQVDWSRLL Sbjct: 1 MWMGLIQLVEGVKRKDQGFLEKEFYHKTNIKMRCEFLACWPAFTVLGEAWRDQVDWSRLL 60 Query: 61 RDAGLVKMSRKPRASSPLSNNHPPTPKR-----------------FPRQPGREKGPIKEV 103 RDAGLVKMSRKPRASSPLSNNHPPTPKR FPRQPGREKGPIKEV Sbjct: 61 RDAGLVKMSRKPRASSPLSNNHPPTPKRRGSGRHPLNPGPEALSKFPRQPGREKGPIKEV 120 Query: 104 PGTKGSP 110 PGTKGSP Sbjct: 121 PGTKGSP 127 >gi|24234760 chondrosarcoma associated gene 1 [Homo sapiens] Length = 78 Score = 140 bits (353), Expect = 2e-34 Identities = 65/73 (89%), Positives = 66/73 (90%) Query: 38 ACWPAFTVLGEAWRDQVDWSRLLRDAGLVKMSRKPRASSPLSNNHPPTPKRFPRQPGREK 97 ACWPAFTVLGEA DQVDWSRL RD GLVKMSRKPRASSP SNNHP TPKRFPRQP REK Sbjct: 6 ACWPAFTVLGEARGDQVDWSRLYRDTGLVKMSRKPRASSPFSNNHPSTPKRFPRQPKREK 65 Query: 98 GPIKEVPGTKGSP 110 GP+KEVPGTKGSP Sbjct: 66 GPVKEVPGTKGSP 78 >gi|156547151 chondrosarcoma associated gene 1 [Homo sapiens] Length = 78 Score = 140 bits (353), Expect = 2e-34 Identities = 65/73 (89%), Positives = 66/73 (90%) Query: 38 ACWPAFTVLGEAWRDQVDWSRLLRDAGLVKMSRKPRASSPLSNNHPPTPKRFPRQPGREK 97 ACWPAFTVLGEA DQVDWSRL RD GLVKMSRKPRASSP SNNHP TPKRFPRQP REK Sbjct: 6 ACWPAFTVLGEARGDQVDWSRLYRDTGLVKMSRKPRASSPFSNNHPSTPKRFPRQPKREK 65 Query: 98 GPIKEVPGTKGSP 110 GP+KEVPGTKGSP Sbjct: 66 GPVKEVPGTKGSP 78 >gi|208022661 hypothetical protein LOC57701 [Homo sapiens] Length = 1334 Score = 28.9 bits (63), Expect = 0.93 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 5/67 (7%) Query: 44 TVLGEAWRDQVDWSRLLRDAGLVKMSRKPRASSPLSNNHP-----PTPKRFPRQPGREKG 98 T+LG R Q++ +LL D + A+ PL+ +HP +P + P Q + KG Sbjct: 316 TLLGALARRQLNLGQLLEDTESYLQAFLAGAAGPLNGDHPGPGQSSSPDQAPPQLSKSKG 375 Query: 99 PIKEVPG 105 K G Sbjct: 376 LPKSAWG 382 >gi|148536825 alpha 1 type IV collagen preproprotein [Homo sapiens] Length = 1669 Score = 28.5 bits (62), Expect = 1.2 Identities = 13/27 (48%), Positives = 15/27 (55%) Query: 84 PTPKRFPRQPGREKGPIKEVPGTKGSP 110 P PK FP PG+ P VPG G+P Sbjct: 358 PGPKGFPGLPGQPGPPGLPVPGQAGAP 384 >gi|62739186 complement factor H isoform a precursor [Homo sapiens] Length = 1231 Score = 28.1 bits (61), Expect = 1.6 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 6/53 (11%) Query: 5 LIQLVEGVKRKDQGFLEKEFYHKTNIKMRCEFLACWPAFTVLGEAWRDQVDWS 57 LI L E +K K KEF H +NI+ RC W + W +V+ S Sbjct: 758 LIILEEHLKNK------KEFDHNSNIRYRCRGKEGWIHTVCINGRWDPEVNCS 804 >gi|5729929 matrix metalloproteinase 24 preproprotein [Homo sapiens] Length = 645 Score = 28.1 bits (61), Expect = 1.6 Identities = 11/39 (28%), Positives = 21/39 (53%) Query: 71 KPRASSPLSNNHPPTPKRFPRQPGREKGPIKEVPGTKGS 109 +P + P+ H P+ ++ RQP + P+ + P T G+ Sbjct: 337 RPLPTLPVRRIHSPSERKHERQPRPPRPPLGDRPSTPGT 375 >gi|150170670 piccolo isoform 2 [Homo sapiens] Length = 4935 Score = 28.1 bits (61), Expect = 1.6 Identities = 14/40 (35%), Positives = 17/40 (42%) Query: 71 KPRASSPLSNNHPPTPKRFPRQPGREKGPIKEVPGTKGSP 110 KP A P P P + P QP P+ + PGT P Sbjct: 313 KPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPP 352 Score = 25.8 bits (55), Expect = 7.8 Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 4/45 (8%) Query: 69 SRKPRASSPLSNNHPPTP----KRFPRQPGREKGPIKEVPGTKGS 109 S KP + P S PP K P+QPG K P ++ K S Sbjct: 496 SAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPS 540 >gi|150378539 piccolo isoform 1 [Homo sapiens] Length = 5142 Score = 28.1 bits (61), Expect = 1.6 Identities = 14/40 (35%), Positives = 17/40 (42%) Query: 71 KPRASSPLSNNHPPTPKRFPRQPGREKGPIKEVPGTKGSP 110 KP A P P P + P QP P+ + PGT P Sbjct: 313 KPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPP 352 Score = 25.8 bits (55), Expect = 7.8 Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 4/45 (8%) Query: 69 SRKPRASSPLSNNHPPTP----KRFPRQPGREKGPIKEVPGTKGS 109 S KP + P S PP K P+QPG K P ++ K S Sbjct: 496 SAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPS 540 >gi|57863314 vacuolar protein sorting 37C [Homo sapiens] Length = 355 Score = 28.1 bits (61), Expect = 1.6 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 11/53 (20%) Query: 58 RLLRDAGLVKMSRKPRASSPLSNNHPPTPKRFPRQPGREKGPIKEVPGTKGSP 110 R +R L ++ RKPRAS L+ + PP PR P P++ VP +G+P Sbjct: 146 RRVRVEKLQEVVRKPRASQELAGDAPP-----PRPP----PPVRPVP--QGTP 187 >gi|7657693 zinc finger protein 324 [Homo sapiens] Length = 553 Score = 28.1 bits (61), Expect = 1.6 Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 17/64 (26%) Query: 56 WSRLLRDAGLVKMSRKPRASSPLSNNHPPTPKRF--------------PRQPGREKGPIK 101 W RLL +G + S R +SPL PP R PR P R+K + Sbjct: 144 WERLLLGSGSGQASVSLRLTSPL---RPPEGVRLREKTLTEHALLGRQPRTPERQKPCAQ 200 Query: 102 EVPG 105 EVPG Sbjct: 201 EVPG 204 >gi|40068059 CBF1 interacting corepressor [Homo sapiens] Length = 450 Score = 27.7 bits (60), Expect = 2.1 Identities = 15/37 (40%), Positives = 19/37 (51%) Query: 61 RDAGLVKMSRKPRASSPLSNNHPPTPKRFPRQPGREK 97 R G + SR+ R+ SP S T KR R PG E+ Sbjct: 379 RSHGREERSRRSRSRSPGSYKQRETRKRAQRNPGEEQ 415 >gi|224586851 sorbin and SH3 domain containing 2 isoform 6 [Homo sapiens] Length = 824 Score = 27.7 bits (60), Expect = 2.1 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 4/44 (9%) Query: 71 KPRASSPLSNNHPP----TPKRFPRQPGREKGPIKEVPGTKGSP 110 +P SS L + PP TP PR+PGR+ + GSP Sbjct: 395 EPGKSSILQHERPPPLPTTPTPVPREPGRKPLSSSRLGEVTGSP 438 >gi|224586846 sorbin and SH3 domain containing 2 isoform 4 [Homo sapiens] Length = 731 Score = 27.7 bits (60), Expect = 2.1 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 4/44 (9%) Query: 71 KPRASSPLSNNHPP----TPKRFPRQPGREKGPIKEVPGTKGSP 110 +P SS L + PP TP PR+PGR+ + GSP Sbjct: 302 EPGKSSILQHERPPPLPTTPTPVPREPGRKPLSSSRLGEVTGSP 345 >gi|170784838 secreted frizzled-related protein 4 [Homo sapiens] Length = 346 Score = 27.7 bits (60), Expect = 2.1 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 6/53 (11%) Query: 46 LGEAWRDQ-----VDWSRLLRDAGLVKMSRKPRASSPLSNNHPPTPKRFPRQP 93 L E WRDQ + W L++ +K A S ++PP PK P P Sbjct: 272 LVEKWRDQLSKRSIQWEERLQEQRRTVQDKKKTAGRT-SRSNPPKPKGKPPAP 323 >gi|239748051 PREDICTED: hypothetical protein XP_002346521 [Homo sapiens] Length = 213 Score = 27.7 bits (60), Expect = 2.1 Identities = 18/59 (30%), Positives = 22/59 (37%), Gaps = 13/59 (22%) Query: 64 GLVKMSRKPRASSPLSNNHPPTPKRFP-------------RQPGREKGPIKEVPGTKGS 109 GL PR S + +HPP P FP R P R+ P G +GS Sbjct: 3 GLRASGASPRPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREGS 61 >gi|239741944 PREDICTED: hypothetical protein XP_002342359 [Homo sapiens] Length = 213 Score = 27.7 bits (60), Expect = 2.1 Identities = 18/59 (30%), Positives = 22/59 (37%), Gaps = 13/59 (22%) Query: 64 GLVKMSRKPRASSPLSNNHPPTPKRFP-------------RQPGREKGPIKEVPGTKGS 109 GL PR S + +HPP P FP R P R+ P G +GS Sbjct: 3 GLRASGASPRPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREGS 61 >gi|194018495 zinc finger protein 324B [Homo sapiens] Length = 544 Score = 27.7 bits (60), Expect = 2.1 Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 17/64 (26%) Query: 56 WSRLLRDAGLVKMSRKPRASSPLSNNHPP--------------TPKRFPRQPGREKGPIK 101 W RLL + + S R +SPL PP P R PR P R+K + Sbjct: 144 WERLLLGSRSDQASISLRLTSPL---RPPKSSRPREKTFTEYRVPGRQPRTPERQKPCAQ 200 Query: 102 EVPG 105 EVPG Sbjct: 201 EVPG 204 >gi|34915994 transducin-like enhancer protein 4 [Homo sapiens] Length = 773 Score = 27.7 bits (60), Expect = 2.1 Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Query: 67 KMSRKPRASSPLSNNHPPTPKRFPRQPGREKGP-IKEVPG 105 ++S ++++P+S ++ PTP+ PG P ++ VPG Sbjct: 309 ELSLNEKSTTPVSKSNTPTPRTDAPTPGSNSTPGLRPVPG 348 >gi|169217599 PREDICTED: hypothetical protein [Homo sapiens] Length = 322 Score = 27.3 bits (59), Expect = 2.7 Identities = 12/26 (46%), Positives = 13/26 (50%) Query: 83 PPTPKRFPRQPGREKGPIKEVPGTKG 108 PP P R PR GR P PG +G Sbjct: 195 PPPPPRAPRHAGRSGLPTAHRPGRQG 220 >gi|239757444 PREDICTED: similar to hCG2019076 [Homo sapiens] Length = 231 Score = 27.3 bits (59), Expect = 2.7 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%) Query: 76 SPLSNNHPPTPKRFPRQPGREKGPIKEVPGTKG 108 SPL + PP+P R PR P G + +VP G Sbjct: 7 SPLPD--PPSPFRSPRSPRTRSGCLPQVPSGVG 37 >gi|239754026 PREDICTED: hypothetical protein [Homo sapiens] Length = 422 Score = 27.3 bits (59), Expect = 2.7 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 5/39 (12%) Query: 64 GLVKMSRKPRASSPLSNNHPPTPKRFPRQPGREKGPIKE 102 G + ++PR SSP PP + + +PGR +GP+ + Sbjct: 153 GSLTEPKEPRRSSP-----PPRERGWECRPGRGRGPVSK 186 >gi|169216125 PREDICTED: hypothetical protein [Homo sapiens] Length = 309 Score = 27.3 bits (59), Expect = 2.7 Identities = 12/26 (46%), Positives = 13/26 (50%) Query: 83 PPTPKRFPRQPGREKGPIKEVPGTKG 108 PP P R PR GR P PG +G Sbjct: 182 PPPPPRAPRHAGRSGLPTAHRPGRQG 207 >gi|239751963 PREDICTED: similar to hCG2019076 [Homo sapiens] Length = 231 Score = 27.3 bits (59), Expect = 2.7 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%) Query: 76 SPLSNNHPPTPKRFPRQPGREKGPIKEVPGTKG 108 SPL + PP+P R PR P G + +VP G Sbjct: 7 SPLPD--PPSPFRSPRSPRTRSGCLPQVPSGVG 37 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.320 0.137 0.451 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,268,635 Number of Sequences: 37866 Number of extensions: 247748 Number of successful extensions: 1261 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 41 Number of HSP's successfully gapped in prelim test: 37 Number of HSP's that attempted gapping in prelim test: 1196 Number of HSP's gapped (non-prelim): 100 length of query: 110 length of database: 18,247,518 effective HSP length: 80 effective length of query: 30 effective length of database: 15,218,238 effective search space: 456547140 effective search space used: 456547140 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.