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Search of human proteins with 19311006
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|19311006 protein phosphatase 1, regulatory (inhibitor)
subunit 14C [Homo sapiens]
(165 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|19311006 protein phosphatase 1, regulatory (inhibitor) subuni... 325 1e-89
gi|239755567 PREDICTED: similar to protein phosphatase 1 regulat... 166 8e-42
gi|20162550 protein phosphatase 1 regulatory subunit 14B [Homo s... 166 8e-42
gi|73390140 LIM domain kinase 2 isoform 1 [Homo sapiens] 137 3e-33
gi|15147250 protein phosphatase 1, regulatory (inhibitor) subuni... 93 1e-19
gi|8923226 protein phosphatase 1, regulatory subunit 14D isoform... 77 5e-15
gi|226958575 RAS protein activator like 2 isoform 2 [Homo sapiens] 37 0.006
gi|4758808 RAS protein activator like 2 isoform 1 [Homo sapiens] 37 0.006
gi|24586686 voltage-dependent calcium channel gamma-8 subunit [H... 37 0.010
gi|24497460 Shaw-related voltage-gated potassium channel protein... 35 0.030
gi|148746195 trichohyalin [Homo sapiens] 35 0.030
gi|109255251 loricrin [Homo sapiens] 35 0.039
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 35 0.039
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 35 0.039
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 35 0.039
gi|226442791 runt-related transcription factor 2 isoform b [Homo... 34 0.050
gi|226442783 runt-related transcription factor 2 isoform a [Homo... 34 0.050
gi|197333809 joined to JAZF1 [Homo sapiens] 34 0.050
gi|54792740 transmembrane and coiled-coil domain family 2 [Homo ... 34 0.050
gi|57222568 myeloid/lymphoid or mixed-lineage leukemia (trithora... 34 0.050
gi|22748877 basic helix-loop-helix domain containing, class B, 5... 34 0.050
gi|34452713 Ca2+-dependent secretion activator isoform 2 [Homo s... 34 0.050
gi|34452715 Ca2+-dependent secretion activator isoform 1 [Homo s... 34 0.050
gi|34452711 Ca2+-dependent secretion activator isoform 3 [Homo s... 34 0.050
gi|194306647 protein phosphatase 1, regulatory subunit 14D isofo... 34 0.050
gi|33620755 YEATS domain containing 2 [Homo sapiens] 34 0.050
gi|8051631 RNA binding protein (autoantigenic, hnRNP-associated ... 34 0.050
gi|21396480 RNA binding protein (autoantigenic, hnRNP-associated... 34 0.050
gi|55956899 keratin 9 [Homo sapiens] 34 0.066
gi|239754474 PREDICTED: similar to mucin [Homo sapiens] 34 0.066
>gi|19311006 protein phosphatase 1, regulatory (inhibitor) subunit
14C [Homo sapiens]
Length = 165
Score = 325 bits (832), Expect = 1e-89
Identities = 165/165 (100%), Positives = 165/165 (100%)
Query: 1 MSVATGSSETAGGASGGGARVFFQSPRGGAGGSPGSSSGSGSSREDSAPVATAAAAGQVQ 60
MSVATGSSETAGGASGGGARVFFQSPRGGAGGSPGSSSGSGSSREDSAPVATAAAAGQVQ
Sbjct: 1 MSVATGSSETAGGASGGGARVFFQSPRGGAGGSPGSSSGSGSSREDSAPVATAAAAGQVQ 60
Query: 61 QQQQRRHQQGKVTVKYDRKELRKRLVLEEWIVEQLGQLYGCEEEEMPEVEIDIDDLLDAD 120
QQQQRRHQQGKVTVKYDRKELRKRLVLEEWIVEQLGQLYGCEEEEMPEVEIDIDDLLDAD
Sbjct: 61 QQQQRRHQQGKVTVKYDRKELRKRLVLEEWIVEQLGQLYGCEEEEMPEVEIDIDDLLDAD 120
Query: 121 SDEERASKLQEALVDCYKPTEEFIKELLSRIRGMRKLSPPQKKSV 165
SDEERASKLQEALVDCYKPTEEFIKELLSRIRGMRKLSPPQKKSV
Sbjct: 121 SDEERASKLQEALVDCYKPTEEFIKELLSRIRGMRKLSPPQKKSV 165
>gi|239755567 PREDICTED: similar to protein phosphatase 1 regulatory
subunit 14B [Homo sapiens]
Length = 147
Score = 166 bits (420), Expect = 8e-42
Identities = 86/151 (56%), Positives = 106/151 (70%), Gaps = 23/151 (15%)
Query: 13 GASGGGARVFFQSPRGGAGGSPGSSSGSGSSREDSAPVATAAAAGQVQQQQQRRHQQGKV 72
G+ G G RV+FQSP G AG PG + +D PV +QGKV
Sbjct: 20 GSGGPGPRVYFQSPPGAAGEGPGGA-------DDEGPV----------------RRQGKV 56
Query: 73 TVKYDRKELRKRLVLEEWIVEQLGQLYGCEEEEMPEVEIDIDDLLDADSDEERASKLQEA 132
TVKYDRKELRKRL LEEWI+EQL +LY C+EEE+PE+EID+D+LLD +SD+ RA++++E
Sbjct: 57 TVKYDRKELRKRLNLEEWILEQLTRLYDCQEEEIPELEIDVDELLDMESDDARAARVKEL 116
Query: 133 LVDCYKPTEEFIKELLSRIRGMRKLSPPQKK 163
LVDCYKPTE FI LL +IRGM+KLS PQKK
Sbjct: 117 LVDCYKPTEAFISGLLDKIRGMQKLSTPQKK 147
>gi|20162550 protein phosphatase 1 regulatory subunit 14B [Homo
sapiens]
Length = 147
Score = 166 bits (420), Expect = 8e-42
Identities = 86/151 (56%), Positives = 106/151 (70%), Gaps = 23/151 (15%)
Query: 13 GASGGGARVFFQSPRGGAGGSPGSSSGSGSSREDSAPVATAAAAGQVQQQQQRRHQQGKV 72
G+ G G RV+FQSP G AG PG + +D PV +QGKV
Sbjct: 20 GSGGPGPRVYFQSPPGAAGEGPGGA-------DDEGPV----------------RRQGKV 56
Query: 73 TVKYDRKELRKRLVLEEWIVEQLGQLYGCEEEEMPEVEIDIDDLLDADSDEERASKLQEA 132
TVKYDRKELRKRL LEEWI+EQL +LY C+EEE+PE+EID+D+LLD +SD+ RA++++E
Sbjct: 57 TVKYDRKELRKRLNLEEWILEQLTRLYDCQEEEIPELEIDVDELLDMESDDARAARVKEL 116
Query: 133 LVDCYKPTEEFIKELLSRIRGMRKLSPPQKK 163
LVDCYKPTE FI LL +IRGM+KLS PQKK
Sbjct: 117 LVDCYKPTEAFISGLLDKIRGMQKLSTPQKK 147
>gi|73390140 LIM domain kinase 2 isoform 1 [Homo sapiens]
Length = 686
Score = 137 bits (346), Expect = 3e-33
Identities = 73/140 (52%), Positives = 93/140 (66%), Gaps = 23/140 (16%)
Query: 24 QSPRGGAGGSPGSSSGSGSSREDSAPVATAAAAGQVQQQQQRRHQQGKVTVKYDRKELRK 83
++P G AG PG + +D PV +QGKVT+KYD KELRK
Sbjct: 570 RAPPGAAGEGPGCA-------DDEGPV----------------RRQGKVTIKYDPKELRK 606
Query: 84 RLVLEEWIVEQLGQLYGCEEEEMPEVEIDIDDLLDADSDEERASKLQEALVDCYKPTEEF 143
L LEEWI+EQL +LY C+EEE+ E+EID+D+LLD +SD+ AS+++E LVDCYKPTE F
Sbjct: 607 HLNLEEWILEQLTRLYDCQEEEISELEIDVDELLDMESDDAWASRVKELLVDCYKPTEAF 666
Query: 144 IKELLSRIRGMRKLSPPQKK 163
I LL +IR M+KLS PQKK
Sbjct: 667 ISGLLDKIRAMQKLSTPQKK 686
>gi|15147250 protein phosphatase 1, regulatory (inhibitor) subunit
14A [Homo sapiens]
Length = 147
Score = 92.8 bits (229), Expect = 1e-19
Identities = 46/93 (49%), Positives = 72/93 (77%), Gaps = 3/93 (3%)
Query: 64 QRRHQQGKVTVKYDRKELRKRLVLEEWIVEQLGQLYGCEEEEMPEVEIDIDDLLDADSDE 123
Q+RH +VTVKYDR+EL++RL +E+WI +L +LY E +MP+ EI+ID+LL+ +S+E
Sbjct: 31 QKRH--ARVTVKYDRRELQRRLDVEKWIDGRLEELYRGMEADMPD-EINIDELLELESEE 87
Query: 124 ERASKLQEALVDCYKPTEEFIKELLSRIRGMRK 156
ER+ K+Q L C KP E+FI+ELL++++G+ +
Sbjct: 88 ERSRKIQGLLKSCGKPVEDFIQELLAKLQGLHR 120
>gi|8923226 protein phosphatase 1, regulatory subunit 14D isoform 1
[Homo sapiens]
Length = 145
Score = 77.4 bits (189), Expect = 5e-15
Identities = 41/99 (41%), Positives = 70/99 (70%), Gaps = 4/99 (4%)
Query: 65 RRHQQGKVTVKYDRKELRKRLVLEEWIVEQLGQLYGCEEEEMP-EVEIDIDDLLDADSDE 123
R + ++TVKYDR +L++ L +E+W+ Q+ +L+ +++ P E EID++ L+D S E
Sbjct: 50 RSRRPSRLTVKYDRGQLQRWLEMEQWVDAQVQELF--QDQATPSEPEIDLEALMDL-STE 106
Query: 124 ERASKLQEALVDCYKPTEEFIKELLSRIRGMRKLSPPQK 162
E+ ++L+ L +C +PTE FI ELLS+++ +R+LS PQK
Sbjct: 107 EQKTQLEAILGNCPRPTEAFISELLSQLKKLRRLSRPQK 145
>gi|226958575 RAS protein activator like 2 isoform 2 [Homo sapiens]
Length = 1280
Score = 37.4 bits (85), Expect = 0.006
Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 15/122 (12%)
Query: 36 SSSGSGSSREDSAPVATAAAAGQVQQQQQRRHQQGKVTVKYDRKELRKRLVLEEWIVEQL 95
S S SSRE P A Q QQ Q D + W++
Sbjct: 1059 SRQQSSSSRESPVPKVRAIQRQQTQQVQS----------PVDSATMSPVERTAAWVLNN- 1107
Query: 96 GQLYGCEEEEMPEVEIDIDDLLDADSDEERASKLQEALVDCYKPTEEFIKELLSRIRGMR 155
G EE++ E E ++D+ A+ E+ +KL+E L + EE+ + LL + + M+
Sbjct: 1108 ----GQYEEDVEETEQNLDEAKHAEKYEQEITKLKERLRVSSRRLEEYERRLLVQEQQMQ 1163
Query: 156 KL 157
KL
Sbjct: 1164 KL 1165
>gi|4758808 RAS protein activator like 2 isoform 1 [Homo sapiens]
Length = 1139
Score = 37.4 bits (85), Expect = 0.006
Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 15/122 (12%)
Query: 36 SSSGSGSSREDSAPVATAAAAGQVQQQQQRRHQQGKVTVKYDRKELRKRLVLEEWIVEQL 95
S S SSRE P A Q QQ Q D + W++
Sbjct: 918 SRQQSSSSRESPVPKVRAIQRQQTQQVQS----------PVDSATMSPVERTAAWVLNN- 966
Query: 96 GQLYGCEEEEMPEVEIDIDDLLDADSDEERASKLQEALVDCYKPTEEFIKELLSRIRGMR 155
G EE++ E E ++D+ A+ E+ +KL+E L + EE+ + LL + + M+
Sbjct: 967 ----GQYEEDVEETEQNLDEAKHAEKYEQEITKLKERLRVSSRRLEEYERRLLVQEQQMQ 1022
Query: 156 KL 157
KL
Sbjct: 1023 KL 1024
>gi|24586686 voltage-dependent calcium channel gamma-8 subunit [Homo
sapiens]
Length = 425
Score = 36.6 bits (83), Expect = 0.010
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 2 SVATGSSETAGGASGGGARVFFQSPRGGAGGSPGSSSGSGSSRE 45
SVA G + GG GGGA F GGAGG G G+G+ R+
Sbjct: 317 SVAAGLAGAGGG--GGGAVGAFGGAAGGAGGGGGGGGGAGAERD 358
Score = 26.9 bits (58), Expect = 8.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 6 GSSETAGGASGGGARVFFQSPRGGAGG 32
G++ AGG GGG + RGGA G
Sbjct: 338 GAAGGAGGGGGGGGGAGAERDRGGASG 364
>gi|24497460 Shaw-related voltage-gated potassium channel protein 3
[Homo sapiens]
Length = 757
Score = 35.0 bits (79), Expect = 0.030
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 8/46 (17%)
Query: 6 GSSETAGGASGGGA--------RVFFQSPRGGAGGSPGSSSGSGSS 43
G + GA GGG R+ FQ GGAGG PG + G+G +
Sbjct: 222 GGLDDEAGAGGGGLDGAGGELKRLCFQDAGGGAGGPPGGAGGAGGT 267
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 35.0 bits (79), Expect = 0.030
Identities = 27/107 (25%), Positives = 55/107 (51%), Gaps = 13/107 (12%)
Query: 57 GQVQQQQQRRHQQGKVTVKYDRKELRKRLVLEEWIVEQLGQLYGCEEEEMPEVEIDIDDL 116
G+ ++QQQRR +Q +V + + KE RKR + E+L +EE P+ + ++ +
Sbjct: 222 GREEKQQQRRERQDRVFQEEEEKEWRKRETVLRKEEEKL-------QEEEPQRQRELQE- 273
Query: 117 LDADSDEERASKLQEALVDCYKPTEEFIKELLSRIRGMRKLSPPQKK 163
+EE+ KL+ + + EE ++ L R + +R+ +++
Sbjct: 274 -----EEEQLRKLERQELRRERQEEEQQQQRLRREQQLRRKQEEERR 315
Score = 27.7 bits (60), Expect = 4.7
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 60 QQQQQRRHQQGKVTVKYDRKELRKRLVLEEWIVEQL---GQLYGCEEEEMPEVE 110
+ Q+QRR Q+ + ++ +RK R L + + EQL QL EEEE+ E
Sbjct: 864 RSQEQRRDQKWRWQLEEERKRRRHTLYAKPALQEQLRKEQQLLQEEEEELQREE 917
>gi|109255251 loricrin [Homo sapiens]
Length = 312
Score = 34.7 bits (78), Expect = 0.039
Identities = 20/39 (51%), Positives = 20/39 (51%), Gaps = 5/39 (12%)
Query: 3 VATGSSETAGGASGGGARVFFQSPRGGAGGSPGSSSGSG 41
V T GG SGGG FF G GGS G SSGSG
Sbjct: 17 VKTSGGGGGGGGSGGGGCGFF-----GGGGSGGGSSGSG 50
Score = 33.1 bits (74), Expect = 0.11
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 9/58 (15%)
Query: 10 TAGGASGGGARVFFQSPRGGA------GGSP---GSSSGSGSSREDSAPVATAAAAGQ 58
++GG+SGGG+ F GG+ GGS GSS GSGS S V + A Q
Sbjct: 165 SSGGSSGGGSGCFSSGGGGGSVCGYSGGGSGCGGGSSGGSGSGYVSSQQVTQTSCAPQ 222
Score = 30.8 bits (68), Expect = 0.56
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 8 SETAGGASGGGARVFFQSPRGGAGGSPG--SSSGSGSS 43
S GG+SGGG+ F G +GG G SS G G S
Sbjct: 115 SSGGGGSSGGGSGCFSSGGGGSSGGGSGCFSSGGGGFS 152
Score = 30.8 bits (68), Expect = 0.56
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 10 TAGGASGGGARVFFQSPRGGAGGSPGSSSGSGS 42
++GG GG+ F GG+ G G SSG GS
Sbjct: 229 SSGGGGSGGSGCFSSGGGGGSSGCGGGSSGIGS 261
Score = 30.4 bits (67), Expect = 0.73
Identities = 16/32 (50%), Positives = 18/32 (56%)
Query: 12 GGASGGGARVFFQSPRGGAGGSPGSSSGSGSS 43
GG+SGGG GG+GGS S G GSS
Sbjct: 66 GGSSGGGGGGGIGGCGGGSGGSVKYSGGGGSS 97
Score = 30.0 bits (66), Expect = 0.95
Identities = 19/58 (32%), Positives = 22/58 (37%)
Query: 6 GSSETAGGASGGGARVFFQSPRGGAGGSPGSSSGSGSSREDSAPVATAAAAGQVQQQQ 63
GSS GG+SG G+ GG G GSS S Q QQ+Q
Sbjct: 248 GSSGCGGGSSGIGSGCIISGGGSVCGGGSSGGGGGGSSVGGSGSGKGVPICHQTQQKQ 305
Score = 29.3 bits (64), Expect = 1.6
Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Query: 5 TGSSETAGGASGGGARVFFQSPRGGAGGSPGSSSGSGSS 43
+G + GG S GG F S G GGS G SG SS
Sbjct: 111 SGCFSSGGGGSSGGGSGCFSS---GGGGSSGGGSGCFSS 146
Score = 28.9 bits (63), Expect = 2.1
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 5/39 (12%)
Query: 5 TGSSETAGGASGGGARVFFQSPRGGAGGSPGSSSGSGSS 43
+G +GG GGG+ S GG GG G GSG S
Sbjct: 54 SGGGGYSGGGCGGGS-----SGGGGGGGIGGCGGGSGGS 87
Score = 28.5 bits (62), Expect = 2.8
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 10/69 (14%)
Query: 5 TGSSETAGGASG------GGARVFFQSPRGGAGGSPG--SSSGSGSSREDSAPVATAAA- 55
+G ++GG SG GG+ F G +GG G SS G GSS S ++
Sbjct: 91 SGGGGSSGGGSGCFSSGGGGSGCFSSGGGGSSGGGSGCFSSGGGGSSGGGSGCFSSGGGG 150
Query: 56 -AGQVQQQQ 63
+GQ Q Q
Sbjct: 151 FSGQAVQCQ 159
Score = 26.9 bits (58), Expect = 8.0
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
Query: 6 GSSETA--GGASGGGARVFFQSPRGGAGGSPGSSSGSGSS 43
GS + + GG+SGGG+ F GG G SS G GSS
Sbjct: 86 GSVKYSGGGGSSGGGSGCF---SSGGGGSGCFSSGGGGSS 122
Score = 26.9 bits (58), Expect = 8.0
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 7/58 (12%)
Query: 8 SETAGGASGGGARVFFQSPRGGAGG------SPGSSSGSGSSREDSAPVATAAAAGQV 59
S GG+SGGG+ F S GG G S G S GSS S ++ G V
Sbjct: 130 SSGGGGSSGGGSGC-FSSGGGGFSGQAVQCQSYGGVSSGGSSGGGSGCFSSGGGGGSV 186
Score = 26.9 bits (58), Expect = 8.0
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 9/39 (23%)
Query: 3 VATGSSETAGGASGGGARVFFQSPRGGAGGSPGSSSGSG 41
++ G S GG+SGGG GG GS SG G
Sbjct: 265 ISGGGSVCGGGSSGGG---------GGGSSVGGSGSGKG 294
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 34.7 bits (78), Expect = 0.039
Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 11 AGGASGGGARVFFQSPRGGAGGSPGSSSGSGSSREDSAPVATAAAAG 57
AGG GGG S GG GG G + G+G+ +A A AAAAG
Sbjct: 248 AGGGGGGGGGGGGGSGGGGGGGGAG-AGGAGAGAVAAAAAAAAAAAG 293
Score = 28.5 bits (62), Expect = 2.8
Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 7/75 (9%)
Query: 2 SVATGSSETAGGASGGG------ARVFFQSPRGGAGGSPGSSSGSGSSREDSAPVATAAA 55
+ A ++ AGG GGG SPR GG G G++ A A +AA
Sbjct: 283 AAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKA-AAGSAA 341
Query: 56 AGQVQQQQQRRHQQG 70
G + Q +H G
Sbjct: 342 GGFQRFAGQNQHPSG 356
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 34.7 bits (78), Expect = 0.039
Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 11 AGGASGGGARVFFQSPRGGAGGSPGSSSGSGSSREDSAPVATAAAAG 57
AGG GGG S GG GG G + G+G+ +A A AAAAG
Sbjct: 248 AGGGGGGGGGGGGGSGGGGGGGGAG-AGGAGAGAVAAAAAAAAAAAG 293
Score = 28.5 bits (62), Expect = 2.8
Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 7/75 (9%)
Query: 2 SVATGSSETAGGASGGG------ARVFFQSPRGGAGGSPGSSSGSGSSREDSAPVATAAA 55
+ A ++ AGG GGG SPR GG G G++ A A +AA
Sbjct: 283 AAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKA-AAGSAA 341
Query: 56 AGQVQQQQQRRHQQG 70
G + Q +H G
Sbjct: 342 GGFQRFAGQNQHPSG 356
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 34.7 bits (78), Expect = 0.039
Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 11 AGGASGGGARVFFQSPRGGAGGSPGSSSGSGSSREDSAPVATAAAAG 57
AGG GGG S GG GG G + G+G+ +A A AAAAG
Sbjct: 248 AGGGGGGGGGGGGGSGGGGGGGGAG-AGGAGAGAVAAAAAAAAAAAG 293
Score = 28.5 bits (62), Expect = 2.8
Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 7/75 (9%)
Query: 2 SVATGSSETAGGASGGG------ARVFFQSPRGGAGGSPGSSSGSGSSREDSAPVATAAA 55
+ A ++ AGG GGG SPR GG G G++ A A +AA
Sbjct: 283 AAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKA-AAGSAA 341
Query: 56 AGQVQQQQQRRHQQG 70
G + Q +H G
Sbjct: 342 GGFQRFAGQNQHPSG 356
>gi|226442791 runt-related transcription factor 2 isoform b [Homo
sapiens]
Length = 499
Score = 34.3 bits (77), Expect = 0.050
Identities = 20/48 (41%), Positives = 23/48 (47%)
Query: 22 FFQSPRGGAGGSPGSSSGSGSSREDSAPVATAAAAGQVQQQQQRRHQQ 69
FF P SP SSS D +PV A Q QQQQQ++ QQ
Sbjct: 17 FFWDPSTSRRFSPPSSSLQPGKMSDVSPVVAAQQQQQQQQQQQQQQQQ 64
>gi|226442783 runt-related transcription factor 2 isoform a [Homo
sapiens]
Length = 521
Score = 34.3 bits (77), Expect = 0.050
Identities = 20/48 (41%), Positives = 23/48 (47%)
Query: 22 FFQSPRGGAGGSPGSSSGSGSSREDSAPVATAAAAGQVQQQQQRRHQQ 69
FF P SP SSS D +PV A Q QQQQQ++ QQ
Sbjct: 17 FFWDPSTSRRFSPPSSSLQPGKMSDVSPVVAAQQQQQQQQQQQQQQQQ 64
>gi|197333809 joined to JAZF1 [Homo sapiens]
Length = 739
Score = 34.3 bits (77), Expect = 0.050
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 7 SSETAGGASGGGARVFFQSPRGGAGGSPGSSSGSGSSREDSAPVATAAAAG 57
S+ + GG GG A V + GG G G S G G S S+ + AAAAG
Sbjct: 17 SAGSGGGGFGGSAAVAAATASGGKSG--GGSCGGGGSYSASSSSSAAAAAG 65
Score = 28.9 bits (63), Expect = 2.1
Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 24 QSPRGGAGGSPGSSSGSGSSR-EDSAPVATAAAAG 57
Q GG GG G S+GSG SA VA A A+G
Sbjct: 4 QKHGGGGGGGSGPSAGSGGGGFGGSAAVAAATASG 38
Score = 27.3 bits (59), Expect = 6.2
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 8/49 (16%)
Query: 2 SVATGSSETAGGASGGGARVFFQSPRGGAGGSPGSSSGSGSSREDSAPV 50
S A ++ +GG SGGG+ G GGS +SS S ++ A V
Sbjct: 28 SAAVAAATASGGKSGGGS--------CGGGGSYSASSSSSAAAAAGAAV 68
>gi|54792740 transmembrane and coiled-coil domain family 2 [Homo
sapiens]
Length = 709
Score = 34.3 bits (77), Expect = 0.050
Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 14/141 (9%)
Query: 2 SVATGSSETAGGASGGGARVFFQSPRGGAGGSPGSSSGSGSSREDSAPVATAAAAGQVQQ 61
S A+ SS AG SG G GGA GSP S++ G+ A + + Q
Sbjct: 480 SSASASSAGAGSNSGAGP--------GGALGSPKSNALYGAPGNLDALLEELREIKEGQS 531
Query: 62 QQQRRHQQGKVTVKYDRKELRKRLVLE----EWIVEQLGQLYGCEEEEMPEVEIDIDDLL 117
+ + K ++ D + + L E E + EQL L + EM ++ ++ +
Sbjct: 532 HLEDSMEDLKTQLQRDYTYMTQCLQEERYRYERLEEQLNDLTELHQNEMTNLKQELASME 591
Query: 118 D--ADSDEERASKLQEALVDC 136
+ A ERA +QEA+ C
Sbjct: 592 EKVAYQSYERARDIQEAVESC 612
>gi|57222568 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 6 [Homo sapiens]
Length = 1093
Score = 34.3 bits (77), Expect = 0.050
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 9 ETAGGASGGGARVFFQSPRGGAGGSPGSSSGSGSSREDSAPVATAAAAGQVQQQQQRRHQ 68
+T+ +SGGG GG G G S G G S S + +A+ Q++ H+
Sbjct: 185 KTSRHSSGGG---------GGGAGGGGGSMGGGGSGFISGRRSRSASPSTQQEKHPTHHE 235
Query: 69 QGKVTVKYDRKELRKR 84
+G+ + D++ L+++
Sbjct: 236 RGQKKSRKDKERLKQK 251
>gi|22748877 basic helix-loop-helix domain containing, class B, 5
[Homo sapiens]
Length = 381
Score = 34.3 bits (77), Expect = 0.050
Identities = 18/43 (41%), Positives = 20/43 (46%)
Query: 6 GSSETAGGASGGGARVFFQSPRGGAGGSPGSSSGSGSSREDSA 48
G+S GG GGG GG GGS S GS SS S+
Sbjct: 192 GASVPPGGLGGGGGGGSSSGSSGGGGGSGSGSGGSSSSSSSSS 234
Score = 29.6 bits (65), Expect = 1.2
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 14/70 (20%)
Query: 6 GSSETAGGASG----GGARVFFQSPRGGAGG------SPGSSSGSGSSREDSAPVATAAA 55
G ++ A G S GGA V P GG GG S GSS G G S S +++++
Sbjct: 176 GGAKAAEGCSNAHLHGGASV----PPGGLGGGGGGGSSSGSSGGGGGSGSGSGGSSSSSS 231
Query: 56 AGQVQQQQQR 65
+ + ++Q+
Sbjct: 232 SSSKKSKEQK 241
Score = 28.5 bits (62), Expect = 2.8
Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Query: 4 ATGSSETAG---GASGGGARVFFQSPRGGAGGSPGSSSGSG 41
A+ SS G A GA + P GG GGS GS G G
Sbjct: 55 ASSSSSPLGCFEPADPEGAGLLLPPPGGGGGGSAGSGGGGG 95
>gi|34452713 Ca2+-dependent secretion activator isoform 2 [Homo
sapiens]
Length = 1314
Score = 34.3 bits (77), Expect = 0.050
Identities = 22/100 (22%), Positives = 43/100 (43%), Gaps = 4/100 (4%)
Query: 4 ATGSSETAGGASGGGARVFFQSPRGGAGGSPGSSSGSGSSREDSAPVATAAAAGQVQQQQ 63
+ GS+ GG +G GA V GG GGS SS G + S+ +
Sbjct: 42 SAGSAGLGGGGAGAGAGV----GAGGGGGSGASSGGGAGGLQPSSRAGGGRPSSPSPSVV 97
Query: 64 QRRHQQGKVTVKYDRKELRKRLVLEEWIVEQLGQLYGCEE 103
+ ++ ++ + +E +KRL L +++ + + ++
Sbjct: 98 SEKEKEELERLQKEEEERKKRLQLYVFVMRCIAYPFNAKQ 137
Score = 28.9 bits (63), Expect = 2.1
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Query: 3 VATGSSETAGGASGGGARVFFQSPRGGAGGSPGSSSGSGSSREDSAPVATAAAAGQVQQQ 62
V G +G +SGGGA S R G GG P S S S S ++ + ++Q++
Sbjct: 59 VGAGGGGGSGASSGGGAGGLQPSSRAG-GGRPSSPSPSVVSEKEKEELE------RLQKE 111
Query: 63 QQRRHQQ 69
++ R ++
Sbjct: 112 EEERKKR 118
>gi|34452715 Ca2+-dependent secretion activator isoform 1 [Homo
sapiens]
Length = 1353
Score = 34.3 bits (77), Expect = 0.050
Identities = 22/100 (22%), Positives = 43/100 (43%), Gaps = 4/100 (4%)
Query: 4 ATGSSETAGGASGGGARVFFQSPRGGAGGSPGSSSGSGSSREDSAPVATAAAAGQVQQQQ 63
+ GS+ GG +G GA V GG GGS SS G + S+ +
Sbjct: 42 SAGSAGLGGGGAGAGAGV----GAGGGGGSGASSGGGAGGLQPSSRAGGGRPSSPSPSVV 97
Query: 64 QRRHQQGKVTVKYDRKELRKRLVLEEWIVEQLGQLYGCEE 103
+ ++ ++ + +E +KRL L +++ + + ++
Sbjct: 98 SEKEKEELERLQKEEEERKKRLQLYVFVMRCIAYPFNAKQ 137
Score = 28.9 bits (63), Expect = 2.1
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Query: 3 VATGSSETAGGASGGGARVFFQSPRGGAGGSPGSSSGSGSSREDSAPVATAAAAGQVQQQ 62
V G +G +SGGGA S R G GG P S S S S ++ + ++Q++
Sbjct: 59 VGAGGGGGSGASSGGGAGGLQPSSRAG-GGRPSSPSPSVVSEKEKEELE------RLQKE 111
Query: 63 QQRRHQQ 69
++ R ++
Sbjct: 112 EEERKKR 118
>gi|34452711 Ca2+-dependent secretion activator isoform 3 [Homo
sapiens]
Length = 1274
Score = 34.3 bits (77), Expect = 0.050
Identities = 22/100 (22%), Positives = 43/100 (43%), Gaps = 4/100 (4%)
Query: 4 ATGSSETAGGASGGGARVFFQSPRGGAGGSPGSSSGSGSSREDSAPVATAAAAGQVQQQQ 63
+ GS+ GG +G GA V GG GGS SS G + S+ +
Sbjct: 42 SAGSAGLGGGGAGAGAGV----GAGGGGGSGASSGGGAGGLQPSSRAGGGRPSSPSPSVV 97
Query: 64 QRRHQQGKVTVKYDRKELRKRLVLEEWIVEQLGQLYGCEE 103
+ ++ ++ + +E +KRL L +++ + + ++
Sbjct: 98 SEKEKEELERLQKEEEERKKRLQLYVFVMRCIAYPFNAKQ 137
Score = 28.9 bits (63), Expect = 2.1
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Query: 3 VATGSSETAGGASGGGARVFFQSPRGGAGGSPGSSSGSGSSREDSAPVATAAAAGQVQQQ 62
V G +G +SGGGA S R G GG P S S S S ++ + ++Q++
Sbjct: 59 VGAGGGGGSGASSGGGAGGLQPSSRAG-GGRPSSPSPSVVSEKEKEELE------RLQKE 111
Query: 63 QQRRHQQ 69
++ R ++
Sbjct: 112 EEERKKR 118
>gi|194306647 protein phosphatase 1, regulatory subunit 14D
isoform 2 [Homo sapiens]
Length = 200
Score = 34.3 bits (77), Expect = 0.050
Identities = 13/35 (37%), Positives = 25/35 (71%)
Query: 65 RRHQQGKVTVKYDRKELRKRLVLEEWIVEQLGQLY 99
R + ++TVKYDR +L++ L +E+W+ Q+ +L+
Sbjct: 50 RSRRPSRLTVKYDRGQLQRWLEMEQWVDAQVQELF 84
>gi|33620755 YEATS domain containing 2 [Homo sapiens]
Length = 1422
Score = 34.3 bits (77), Expect = 0.050
Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 8/56 (14%)
Query: 2 SVATGSSETAGGASGGGARVFFQSPRGGAGGSPGSSSGSGSSREDSAPVATAAAAG 57
S A+G S GG GGG GG+G G S+G G +TA G
Sbjct: 795 SAASGGSGAGGGGGGGGG--------GGSGSGGGGSTGGGGGTAGGGTQSTAGPGG 842
Score = 28.5 bits (62), Expect = 2.8
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 9/52 (17%)
Query: 7 SSETAGGASGGGARVFFQSPRGGAGGSPGSSSGSGSSREDSAPVATAAAAGQ 58
S A G SG G GG GG G SGSG TA Q
Sbjct: 793 SGSAASGGSGAG---------GGGGGGGGGGSGSGGGGSTGGGGGTAGGGTQ 835
>gi|8051631 RNA binding protein (autoantigenic, hnRNP-associated
with lethal yellow) long isoform [Homo sapiens]
Length = 306
Score = 34.3 bits (77), Expect = 0.050
Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 9/61 (14%)
Query: 6 GSSETAGGASGGGARVFFQSPRGGAGGSPGSSSGSGSSREDSAPVATAAAAGQVQQQQQR 65
G AGG GGG G GG G G GSSR + T + AG Q + +
Sbjct: 225 GDGGGAGGGGGGG---------GSGGGGSGGGGGGGSSRPPAPQENTTSEAGLPQGEART 275
Query: 66 R 66
R
Sbjct: 276 R 276
Score = 31.6 bits (70), Expect = 0.33
Identities = 18/59 (30%), Positives = 22/59 (37%), Gaps = 7/59 (11%)
Query: 12 GGASGGGARVFFQSPRGGAGGSPGSSSGSGSSREDSAPVATAAAAGQVQQQQQRRHQQG 70
GGA GGG GG+GG G G S AP + + Q + R G
Sbjct: 228 GGAGGGGGG-------GGSGGGGSGGGGGGGSSRPPAPQENTTSEAGLPQGEARTRDDG 279
>gi|21396480 RNA binding protein (autoantigenic, hnRNP-associated
with lethal yellow) short isoform [Homo sapiens]
Length = 290
Score = 34.3 bits (77), Expect = 0.050
Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 9/61 (14%)
Query: 6 GSSETAGGASGGGARVFFQSPRGGAGGSPGSSSGSGSSREDSAPVATAAAAGQVQQQQQR 65
G AGG GGG G GG G G GSSR + T + AG Q + +
Sbjct: 209 GDGGGAGGGGGGG---------GSGGGGSGGGGGGGSSRPPAPQENTTSEAGLPQGEART 259
Query: 66 R 66
R
Sbjct: 260 R 260
Score = 31.6 bits (70), Expect = 0.33
Identities = 18/59 (30%), Positives = 22/59 (37%), Gaps = 7/59 (11%)
Query: 12 GGASGGGARVFFQSPRGGAGGSPGSSSGSGSSREDSAPVATAAAAGQVQQQQQRRHQQG 70
GGA GGG GG+GG G G S AP + + Q + R G
Sbjct: 212 GGAGGGGGG-------GGSGGGGSGGGGGGGSSRPPAPQENTTSEAGLPQGEARTRDDG 263
>gi|55956899 keratin 9 [Homo sapiens]
Length = 623
Score = 33.9 bits (76), Expect = 0.066
Identities = 17/36 (47%), Positives = 19/36 (52%)
Query: 6 GSSETAGGASGGGARVFFQSPRGGAGGSPGSSSGSG 41
GS + GG GG RGG+GGS G SGSG
Sbjct: 492 GSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSG 527
Score = 32.3 bits (72), Expect = 0.19
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 5/37 (13%)
Query: 5 TGSSETAGGASGGGARVFFQSPRGGAGGSPGSSSGSG 41
+GS +GG GGG+ RGG+GGS G SG G
Sbjct: 562 SGSGGGSGGGYGGGS-----GSRGGSGGSHGGGSGFG 593
Score = 31.2 bits (69), Expect = 0.43
Identities = 18/36 (50%), Positives = 18/36 (50%), Gaps = 5/36 (13%)
Query: 6 GSSETAGGASGGGARVFFQSPRGGAGGSPGSSSGSG 41
G S GGASGGG S GG GG G SG G
Sbjct: 92 GGSRGFGGASGGG-----YSSSGGFGGGFGGGSGGG 122
Score = 30.4 bits (67), Expect = 0.73
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 6/42 (14%)
Query: 2 SVATGSSETAGGASGGGARVFFQSPRGGAGGSPGSSSGSGSS 43
S GS +GG+ GGG GG GG GS GSG S
Sbjct: 484 SYGRGSRGGSGGSYGGGGS------GGGYGGGSGSRGGSGGS 519
Score = 29.6 bits (65), Expect = 1.2
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
Query: 5 TGSSETAGGASGGGARVFFQSPRGGAGGSPGSSSGSGSS 43
+GS +GG+ GGG+ GG+GG G SG G S
Sbjct: 510 SGSRGGSGGSYGGGS-----GSGGGSGGGYGGGSGGGHS 543
Score = 29.6 bits (65), Expect = 1.2
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 5/38 (13%)
Query: 6 GSSETAGGASGGGARVFFQSPRGGAGGSPGSSSGSGSS 43
GS GG SG G GG GG GS GSG S
Sbjct: 553 GSGGNYGGGSGSGG-----GSGGGYGGGSGSRGGSGGS 585
Score = 28.1 bits (61), Expect = 3.6
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 4 ATGSSETAGGASGGGARVFFQSPRGGAGGSPGSSSGSG 41
++G+ + G GG + + RGG+GGS G G
Sbjct: 467 SSGAGKIGLGGRGGSGGSYGRGSRGGSGGSYGGGGSGG 504
Score = 27.7 bits (60), Expect = 4.7
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 6 GSSETAGGASGGGARVFFQSPRGGAGGSPGSSSGSGSSREDS 47
G S +GG GG+ + G GGS G G SR S
Sbjct: 541 GHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSRGGS 582
Score = 27.3 bits (59), Expect = 6.2
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 7/38 (18%)
Query: 6 GSSETAGGASGGGARVFFQSPRGGAGGSPGSSSGSGSS 43
G +GG SGGG GG+GG SG G S
Sbjct: 521 GGGSGSGGGSGGGYG-------GGSGGGHSGGSGGGHS 551
Score = 27.3 bits (59), Expect = 6.2
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 5 TGSSETAGGASGGGARVFFQSPRGGAGGSPGSSSGSG 41
+GS +GG+ GGG+ +S GG S SG G
Sbjct: 576 SGSRGGSGGSHGGGSGFGGESGGSYGGGEEASGSGGG 612
Score = 26.9 bits (58), Expect = 8.0
Identities = 14/40 (35%), Positives = 18/40 (45%)
Query: 3 VATGSSETAGGASGGGARVFFQSPRGGAGGSPGSSSGSGS 42
+ G +GG+ G G+R GG G G GSGS
Sbjct: 473 IGLGGRGGSGGSYGRGSRGGSGGSYGGGGSGGGYGGGSGS 512
Score = 26.9 bits (58), Expect = 8.0
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 2 SVATGSSETAGGASGGGARVFFQSPRGGAGGSPGSSSG 39
S +G + G SGGG+ + G GGS GS G
Sbjct: 551 SGGSGGNYGGGSGSGGGSGGGYGGGSGSRGGSGGSHGG 588
>gi|239754474 PREDICTED: similar to mucin [Homo sapiens]
Length = 417
Score = 33.9 bits (76), Expect = 0.066
Identities = 20/62 (32%), Positives = 28/62 (45%)
Query: 27 RGGAGGSPGSSSGSGSSREDSAPVATAAAAGQVQQQQQRRHQQGKVTVKYDRKELRKRLV 86
R G+G SP + RE+ A A AA + Q +++ T R E RKRL
Sbjct: 50 RRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPVPTSSGHRTEKRKRLQ 109
Query: 87 LE 88
L+
Sbjct: 110 LQ 111
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.128 0.351
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,083,683
Number of Sequences: 37866
Number of extensions: 359894
Number of successful extensions: 5442
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 223
Number of HSP's that attempted gapping in prelim test: 3690
Number of HSP's gapped (non-prelim): 1465
length of query: 165
length of database: 18,247,518
effective HSP length: 94
effective length of query: 71
effective length of database: 14,688,114
effective search space: 1042856094
effective search space used: 1042856094
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.