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Search of human proteins with 189083844
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|189083844 cathepsin C isoform a preproprotein [Homo sapiens]
(463 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|189083844 cathepsin C isoform a preproprotein [Homo sapiens] 978 0.0
gi|167000671 cathepsin C isoform c precursor [Homo sapiens] 221 1e-57
gi|22538440 cathepsin C isoform b precursor [Homo sapiens] 221 1e-57
gi|23110957 cathepsin H isoform b precursor [Homo sapiens] 148 1e-35
gi|23110955 cathepsin H isoform a preproprotein [Homo sapiens] 148 1e-35
gi|22538437 cathepsin B preproprotein [Homo sapiens] 131 1e-30
gi|22538435 cathepsin B preproprotein [Homo sapiens] 131 1e-30
gi|22538433 cathepsin B preproprotein [Homo sapiens] 131 1e-30
gi|22538431 cathepsin B preproprotein [Homo sapiens] 131 1e-30
gi|4503139 cathepsin B preproprotein [Homo sapiens] 131 1e-30
gi|224586907 tubulointerstitial nephritis antigen [Homo sapiens] 127 3e-29
gi|11545918 tubulointerstitial nephritis antigen-like 1 [Homo sa... 125 6e-29
gi|23110960 cathepsin L2 preproprotein [Homo sapiens] 124 2e-28
gi|6042196 cathepsin F [Homo sapiens] 121 1e-27
gi|22538442 cathepsin Z preproprotein [Homo sapiens] 118 1e-26
gi|4503151 cathepsin K preproprotein [Homo sapiens] 117 2e-26
gi|22202619 cathepsin L1 preproprotein [Homo sapiens] 117 2e-26
gi|4503155 cathepsin L1 preproprotein [Homo sapiens] 117 2e-26
gi|23110962 cathepsin S preproprotein [Homo sapiens] 116 4e-26
gi|23110964 cathepsin W preproprotein [Homo sapiens] 107 2e-23
gi|4557501 cathepsin O preproprotein [Homo sapiens] 96 7e-20
gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transfera... 29 7.9
gi|127139033 cytochrome P450 reductase [Homo sapiens] 29 7.9
gi|38570109 CAP-binding protein complex interacting protein 1 is... 29 7.9
gi|38570107 CAP-binding protein complex interacting protein 1 is... 29 7.9
gi|21450781 hypothetical protein LOC91775 [Homo sapiens] 29 7.9
gi|197333800 hypothetical protein LOC91775 [Homo sapiens] 29 7.9
>gi|189083844 cathepsin C isoform a preproprotein [Homo sapiens]
Length = 463
Score = 978 bits (2527), Expect = 0.0
Identities = 463/463 (100%), Positives = 463/463 (100%)
Query: 1 MGAGPSLLLAALLLLLSGDGAVRCDTPANCTYLDLLGTWVFQVGSSGSQRDVNCSVMGPQ 60
MGAGPSLLLAALLLLLSGDGAVRCDTPANCTYLDLLGTWVFQVGSSGSQRDVNCSVMGPQ
Sbjct: 1 MGAGPSLLLAALLLLLSGDGAVRCDTPANCTYLDLLGTWVFQVGSSGSQRDVNCSVMGPQ 60
Query: 61 EKKVVVYLQKLDTAYDDLGNSGHFTIIYNQGFEIVLNDYKWFAFFKYKEEGSKVTTYCNE 120
EKKVVVYLQKLDTAYDDLGNSGHFTIIYNQGFEIVLNDYKWFAFFKYKEEGSKVTTYCNE
Sbjct: 61 EKKVVVYLQKLDTAYDDLGNSGHFTIIYNQGFEIVLNDYKWFAFFKYKEEGSKVTTYCNE 120
Query: 121 TMTGWVHDVLGRNWACFTGKKVGTASENVYVNTAHLKNSQEKYSNRLYKYDHNFVKAINA 180
TMTGWVHDVLGRNWACFTGKKVGTASENVYVNTAHLKNSQEKYSNRLYKYDHNFVKAINA
Sbjct: 121 TMTGWVHDVLGRNWACFTGKKVGTASENVYVNTAHLKNSQEKYSNRLYKYDHNFVKAINA 180
Query: 181 IQKSWTATTYMEYETLTLGDMIRRSGGHSRKIPRPKPAPLTAEIQQKILHLPTSWDWRNV 240
IQKSWTATTYMEYETLTLGDMIRRSGGHSRKIPRPKPAPLTAEIQQKILHLPTSWDWRNV
Sbjct: 181 IQKSWTATTYMEYETLTLGDMIRRSGGHSRKIPRPKPAPLTAEIQQKILHLPTSWDWRNV 240
Query: 241 HGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSQYAQGCEG 300
HGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSQYAQGCEG
Sbjct: 241 HGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSQYAQGCEG 300
Query: 301 GFPYLIAGKYAQDFGLVEEACFPYTGTDSPCKMKEDCFRYYSSEYHYVGGFYGGCNEALM 360
GFPYLIAGKYAQDFGLVEEACFPYTGTDSPCKMKEDCFRYYSSEYHYVGGFYGGCNEALM
Sbjct: 301 GFPYLIAGKYAQDFGLVEEACFPYTGTDSPCKMKEDCFRYYSSEYHYVGGFYGGCNEALM 360
Query: 361 KLELVHHGPMAVAFEVYDDFLHYKKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDSASGM 420
KLELVHHGPMAVAFEVYDDFLHYKKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDSASGM
Sbjct: 361 KLELVHHGPMAVAFEVYDDFLHYKKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDSASGM 420
Query: 421 DYWIVKNSWGTGWGENGYFRIRRGTDECAIESIAVAATPIPKL 463
DYWIVKNSWGTGWGENGYFRIRRGTDECAIESIAVAATPIPKL
Sbjct: 421 DYWIVKNSWGTGWGENGYFRIRRGTDECAIESIAVAATPIPKL 463
>gi|167000671 cathepsin C isoform c precursor [Homo sapiens]
Length = 141
Score = 221 bits (562), Expect = 1e-57
Identities = 106/106 (100%), Positives = 106/106 (100%)
Query: 1 MGAGPSLLLAALLLLLSGDGAVRCDTPANCTYLDLLGTWVFQVGSSGSQRDVNCSVMGPQ 60
MGAGPSLLLAALLLLLSGDGAVRCDTPANCTYLDLLGTWVFQVGSSGSQRDVNCSVMGPQ
Sbjct: 1 MGAGPSLLLAALLLLLSGDGAVRCDTPANCTYLDLLGTWVFQVGSSGSQRDVNCSVMGPQ 60
Query: 61 EKKVVVYLQKLDTAYDDLGNSGHFTIIYNQGFEIVLNDYKWFAFFK 106
EKKVVVYLQKLDTAYDDLGNSGHFTIIYNQGFEIVLNDYKWFAFFK
Sbjct: 61 EKKVVVYLQKLDTAYDDLGNSGHFTIIYNQGFEIVLNDYKWFAFFK 106
>gi|22538440 cathepsin C isoform b precursor [Homo sapiens]
Length = 137
Score = 221 bits (562), Expect = 1e-57
Identities = 106/106 (100%), Positives = 106/106 (100%)
Query: 1 MGAGPSLLLAALLLLLSGDGAVRCDTPANCTYLDLLGTWVFQVGSSGSQRDVNCSVMGPQ 60
MGAGPSLLLAALLLLLSGDGAVRCDTPANCTYLDLLGTWVFQVGSSGSQRDVNCSVMGPQ
Sbjct: 1 MGAGPSLLLAALLLLLSGDGAVRCDTPANCTYLDLLGTWVFQVGSSGSQRDVNCSVMGPQ 60
Query: 61 EKKVVVYLQKLDTAYDDLGNSGHFTIIYNQGFEIVLNDYKWFAFFK 106
EKKVVVYLQKLDTAYDDLGNSGHFTIIYNQGFEIVLNDYKWFAFFK
Sbjct: 61 EKKVVVYLQKLDTAYDDLGNSGHFTIIYNQGFEIVLNDYKWFAFFK 106
>gi|23110957 cathepsin H isoform b precursor [Homo sapiens]
Length = 323
Score = 148 bits (373), Expect = 1e-35
Identities = 91/232 (39%), Positives = 126/232 (54%), Gaps = 17/232 (7%)
Query: 232 PTSWDWRNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSC 291
P S DWR NFVSPV+NQ +CGSC++F++ G LE+ I I T + L+ Q++V C
Sbjct: 105 PPSVDWRKKG--NFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLS--LAEQQLVDC 160
Query: 292 SQ--YAQGCEGGFPYLIAGKYAQDFGLVEEACFPYTGTDSPCKMKEDCFRYYSSEYHYVG 349
+Q GC+GG P + G++ E +PY G D CK + + + +
Sbjct: 161 AQDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGYCKFQPGKAIGFVKDVANIT 220
Query: 350 GFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYKKGIYHHTGLRDPFNPFELTNHAVLL 409
+ +E M + + P++ AFEV DF+ Y+ GIY T P + NHAVL
Sbjct: 221 IY----DEEAMVEAVALYNPVSFAFEVTQDFMMYRTGIYSSTSCHK--TP-DKVNHAVLA 273
Query: 410 VGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGTDECAIESIAVAATPIP 461
VGYG +G+ YWIVKNSWG WG NGYF I RG + C + A A+ PIP
Sbjct: 274 VGYG--EKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGL--AACASYPIP 321
>gi|23110955 cathepsin H isoform a preproprotein [Homo sapiens]
Length = 335
Score = 148 bits (373), Expect = 1e-35
Identities = 91/232 (39%), Positives = 126/232 (54%), Gaps = 17/232 (7%)
Query: 232 PTSWDWRNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSC 291
P S DWR NFVSPV+NQ +CGSC++F++ G LE+ I I T + L+ Q++V C
Sbjct: 117 PPSVDWRKKG--NFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLS--LAEQQLVDC 172
Query: 292 SQ--YAQGCEGGFPYLIAGKYAQDFGLVEEACFPYTGTDSPCKMKEDCFRYYSSEYHYVG 349
+Q GC+GG P + G++ E +PY G D CK + + + +
Sbjct: 173 AQDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGYCKFQPGKAIGFVKDVANIT 232
Query: 350 GFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYKKGIYHHTGLRDPFNPFELTNHAVLL 409
+ +E M + + P++ AFEV DF+ Y+ GIY T P + NHAVL
Sbjct: 233 IY----DEEAMVEAVALYNPVSFAFEVTQDFMMYRTGIYSSTSCHK--TP-DKVNHAVLA 285
Query: 410 VGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGTDECAIESIAVAATPIP 461
VGYG +G+ YWIVKNSWG WG NGYF I RG + C + A A+ PIP
Sbjct: 286 VGYG--EKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGL--AACASYPIP 333
>gi|22538437 cathepsin B preproprotein [Homo sapiens]
Length = 339
Score = 131 bits (329), Expect = 1e-30
Identities = 95/280 (33%), Positives = 135/280 (48%), Gaps = 52/280 (18%)
Query: 217 PAPLTAEIQQKILHLPTSWDWRNVHG-INFVSPVRNQASCGSCYSFASMGMLEARIRILT 275
P P + + L LP S+D R + +R+Q SCGSC++F ++ + RI I T
Sbjct: 66 PKPPQRVMFTEDLKLPASFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHT 125
Query: 276 NNSQTPILSPQEVVSC--SQYAQGCEGGFPY----------LIAGKYAQDFGLVEE--AC 321
N + +S +++++C S GC GG+P L++G GL E C
Sbjct: 126 NAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSG------GLYESHVGC 179
Query: 322 FPYT---------GTDSPC-------KMKEDCFRYYSSEY----HYVGGFYGGCN-EALM 360
PY+ G+ PC K + C YS Y HY Y N E +
Sbjct: 180 RPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDI 239
Query: 361 KLELVHHGPMAVAFEVYDDFLHYKKGIYHH-TGLRDPFNPFELTNHAVLLVGYGTDSASG 419
E+ +GP+ AF VY DFL YK G+Y H TG + HA+ ++G+G ++ G
Sbjct: 240 MAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGEM-------MGGHAIRILGWGVEN--G 290
Query: 420 MDYWIVKNSWGTGWGENGYFRIRRGTDECAIESIAVAATP 459
YW+V NSW T WG+NG+F+I RG D C IES VA P
Sbjct: 291 TPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIP 330
>gi|22538435 cathepsin B preproprotein [Homo sapiens]
Length = 339
Score = 131 bits (329), Expect = 1e-30
Identities = 95/280 (33%), Positives = 135/280 (48%), Gaps = 52/280 (18%)
Query: 217 PAPLTAEIQQKILHLPTSWDWRNVHG-INFVSPVRNQASCGSCYSFASMGMLEARIRILT 275
P P + + L LP S+D R + +R+Q SCGSC++F ++ + RI I T
Sbjct: 66 PKPPQRVMFTEDLKLPASFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHT 125
Query: 276 NNSQTPILSPQEVVSC--SQYAQGCEGGFPY----------LIAGKYAQDFGLVEE--AC 321
N + +S +++++C S GC GG+P L++G GL E C
Sbjct: 126 NAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSG------GLYESHVGC 179
Query: 322 FPYT---------GTDSPC-------KMKEDCFRYYSSEY----HYVGGFYGGCN-EALM 360
PY+ G+ PC K + C YS Y HY Y N E +
Sbjct: 180 RPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDI 239
Query: 361 KLELVHHGPMAVAFEVYDDFLHYKKGIYHH-TGLRDPFNPFELTNHAVLLVGYGTDSASG 419
E+ +GP+ AF VY DFL YK G+Y H TG + HA+ ++G+G ++ G
Sbjct: 240 MAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGEM-------MGGHAIRILGWGVEN--G 290
Query: 420 MDYWIVKNSWGTGWGENGYFRIRRGTDECAIESIAVAATP 459
YW+V NSW T WG+NG+F+I RG D C IES VA P
Sbjct: 291 TPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIP 330
>gi|22538433 cathepsin B preproprotein [Homo sapiens]
Length = 339
Score = 131 bits (329), Expect = 1e-30
Identities = 95/280 (33%), Positives = 135/280 (48%), Gaps = 52/280 (18%)
Query: 217 PAPLTAEIQQKILHLPTSWDWRNVHG-INFVSPVRNQASCGSCYSFASMGMLEARIRILT 275
P P + + L LP S+D R + +R+Q SCGSC++F ++ + RI I T
Sbjct: 66 PKPPQRVMFTEDLKLPASFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHT 125
Query: 276 NNSQTPILSPQEVVSC--SQYAQGCEGGFPY----------LIAGKYAQDFGLVEE--AC 321
N + +S +++++C S GC GG+P L++G GL E C
Sbjct: 126 NAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSG------GLYESHVGC 179
Query: 322 FPYT---------GTDSPC-------KMKEDCFRYYSSEY----HYVGGFYGGCN-EALM 360
PY+ G+ PC K + C YS Y HY Y N E +
Sbjct: 180 RPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDI 239
Query: 361 KLELVHHGPMAVAFEVYDDFLHYKKGIYHH-TGLRDPFNPFELTNHAVLLVGYGTDSASG 419
E+ +GP+ AF VY DFL YK G+Y H TG + HA+ ++G+G ++ G
Sbjct: 240 MAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGEM-------MGGHAIRILGWGVEN--G 290
Query: 420 MDYWIVKNSWGTGWGENGYFRIRRGTDECAIESIAVAATP 459
YW+V NSW T WG+NG+F+I RG D C IES VA P
Sbjct: 291 TPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIP 330
>gi|22538431 cathepsin B preproprotein [Homo sapiens]
Length = 339
Score = 131 bits (329), Expect = 1e-30
Identities = 95/280 (33%), Positives = 135/280 (48%), Gaps = 52/280 (18%)
Query: 217 PAPLTAEIQQKILHLPTSWDWRNVHG-INFVSPVRNQASCGSCYSFASMGMLEARIRILT 275
P P + + L LP S+D R + +R+Q SCGSC++F ++ + RI I T
Sbjct: 66 PKPPQRVMFTEDLKLPASFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHT 125
Query: 276 NNSQTPILSPQEVVSC--SQYAQGCEGGFPY----------LIAGKYAQDFGLVEE--AC 321
N + +S +++++C S GC GG+P L++G GL E C
Sbjct: 126 NAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSG------GLYESHVGC 179
Query: 322 FPYT---------GTDSPC-------KMKEDCFRYYSSEY----HYVGGFYGGCN-EALM 360
PY+ G+ PC K + C YS Y HY Y N E +
Sbjct: 180 RPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDI 239
Query: 361 KLELVHHGPMAVAFEVYDDFLHYKKGIYHH-TGLRDPFNPFELTNHAVLLVGYGTDSASG 419
E+ +GP+ AF VY DFL YK G+Y H TG + HA+ ++G+G ++ G
Sbjct: 240 MAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGEM-------MGGHAIRILGWGVEN--G 290
Query: 420 MDYWIVKNSWGTGWGENGYFRIRRGTDECAIESIAVAATP 459
YW+V NSW T WG+NG+F+I RG D C IES VA P
Sbjct: 291 TPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIP 330
>gi|4503139 cathepsin B preproprotein [Homo sapiens]
Length = 339
Score = 131 bits (329), Expect = 1e-30
Identities = 95/280 (33%), Positives = 135/280 (48%), Gaps = 52/280 (18%)
Query: 217 PAPLTAEIQQKILHLPTSWDWRNVHG-INFVSPVRNQASCGSCYSFASMGMLEARIRILT 275
P P + + L LP S+D R + +R+Q SCGSC++F ++ + RI I T
Sbjct: 66 PKPPQRVMFTEDLKLPASFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHT 125
Query: 276 NNSQTPILSPQEVVSC--SQYAQGCEGGFPY----------LIAGKYAQDFGLVEE--AC 321
N + +S +++++C S GC GG+P L++G GL E C
Sbjct: 126 NAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSG------GLYESHVGC 179
Query: 322 FPYT---------GTDSPC-------KMKEDCFRYYSSEY----HYVGGFYGGCN-EALM 360
PY+ G+ PC K + C YS Y HY Y N E +
Sbjct: 180 RPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDI 239
Query: 361 KLELVHHGPMAVAFEVYDDFLHYKKGIYHH-TGLRDPFNPFELTNHAVLLVGYGTDSASG 419
E+ +GP+ AF VY DFL YK G+Y H TG + HA+ ++G+G ++ G
Sbjct: 240 MAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGEM-------MGGHAIRILGWGVEN--G 290
Query: 420 MDYWIVKNSWGTGWGENGYFRIRRGTDECAIESIAVAATP 459
YW+V NSW T WG+NG+F+I RG D C IES VA P
Sbjct: 291 TPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIP 330
>gi|224586907 tubulointerstitial nephritis antigen [Homo sapiens]
Length = 476
Score = 127 bits (318), Expect = 3e-29
Identities = 98/340 (28%), Positives = 146/340 (42%), Gaps = 45/340 (13%)
Query: 152 NTAHLKNSQEKYSNRLYKYDHNFVKAINAIQKSWTATTYMEYETLTLGDMIRRSGGHSRK 211
N+ Q K S + ++ +N WTA Y ++ +TL D G +
Sbjct: 138 NSCTCSGQQWKCSQHVCLVRSELIEQVNKGDYGWTAQNYSQFWGMTLED------GFKFR 191
Query: 212 IPRPKPAPLTAEIQQKILHLPTSWDWRNVHGINFVSP-----VRNQASCGSCYSFASMGM 266
+ P+P+ + + LP + D ++ P +Q +C + ++F++ +
Sbjct: 192 LGTLPPSPMLLSMNEMTASLPATTDLPEFFVASYKWPGWTHGPLDQKNCAASWAFSTASV 251
Query: 267 LEARIRILTNNSQTPILSPQEVVSC-SQYAQGCEGGFPYLIAGKYAQDFGLVEEACFPY- 324
RI I + T LSPQ ++SC ++ GC G A Y + GLV AC+P
Sbjct: 252 AADRIAIQSKGRYTANLSPQNLISCCAKNRHGCNSG-SIDRAWWYLRKRGLVSHACYPLF 310
Query: 325 ---TGTDSPCKMK-------------------EDCFRYYSSEYHYVGGFYGGCNEALMKL 362
T++ C M E R Y Y NE +
Sbjct: 311 KDQNATNNGCAMASRSDGRGKRHATKPCPNNVEKSNRIYQCSPPY----RVSSNETEIMK 366
Query: 363 ELVHHGPMAVAFEVYDDFLHYKKGIYHH-TGLRDPFNPF-ELTNHAVLLVGYGT-DSASG 419
E++ +GP+ +V +DF HYK GIY H T + +L HAV L G+GT A G
Sbjct: 367 EIMQNGPVQAIMQVREDFFHYKTGIYRHVTSTNKESEKYRKLQTHAVKLTGWGTLRGAQG 426
Query: 420 MD--YWIVKNSWGTGWGENGYFRIRRGTDECAIESIAVAA 457
+WI NSWG WGENGYFRI RG +E IE + +AA
Sbjct: 427 QKEKFWIAANSWGKSWGENGYFRILRGVNESDIEKLIIAA 466
>gi|11545918 tubulointerstitial nephritis antigen-like 1 [Homo
sapiens]
Length = 467
Score = 125 bits (315), Expect = 6e-29
Identities = 92/319 (28%), Positives = 147/319 (46%), Gaps = 42/319 (13%)
Query: 171 DHNFVKAINAIQKSWTATTYMEYETLTLGDMIRRSGGHSRKIPRPKPAPLTAEIQQKILH 230
D + +KAIN W A + + +TL + IR G R P + + +L+
Sbjct: 143 DPDMIKAINQGNYGWQAGNHSAFWGMTLDEGIRYRLGTIR----PSSSVMNMHEIYTVLN 198
Query: 231 ----LPTSWDWRNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQ 286
LPT+++ + N + +Q +C ++F++ + R+ I + TP+LSPQ
Sbjct: 199 PGEVLPTAFE-ASEKWPNLIHEPLDQGNCAGSWAFSTAAVASDRVSIHSLGHMTPVLSPQ 257
Query: 287 EVVSCSQYAQ-GCEGGFPYLIAGK--YAQDFGLVEEACFPYTGTDS-------PCKMKE- 335
++SC + Q GC GG + G + + G+V + C+P++G + PC M
Sbjct: 258 NLLSCDTHQQQGCRGG---RLDGAWWFLRRRGVVSDHCYPFSGRERDEAGPAPPCMMHSR 314
Query: 336 -----------DCFRYYSSE---YHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFL 381
C Y + Y + G N+ + EL+ +GP+ EV++DF
Sbjct: 315 AMGRGKRQATAHCPNSYVNNNDIYQVTPVYRLGSNDKEIMKELMENGPVQALMEVHEDFF 374
Query: 382 HYKKGIYHHT--GLRDPFNPFELTNHAVLLVGYGTDSASG---MDYWIVKNSWGTGWGEN 436
YK GIY HT L P H+V + G+G ++ + YW NSWG WGE
Sbjct: 375 LYKGGIYSHTPVSLGRPERYRRHGTHSVKITGWGEETLPDGRTLKYWTAANSWGPAWGER 434
Query: 437 GYFRIRRGTDECAIESIAV 455
G+FRI RG +EC IES +
Sbjct: 435 GHFRIVRGVNECDIESFVL 453
>gi|23110960 cathepsin L2 preproprotein [Homo sapiens]
Length = 334
Score = 124 bits (311), Expect = 2e-28
Identities = 83/232 (35%), Positives = 119/232 (51%), Gaps = 20/232 (8%)
Query: 229 LHLPTSWDWRNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEV 288
L LP S DWR +V+PV+NQ CGSC++F++ G LE ++ + LS Q +
Sbjct: 112 LDLPKSVDWRKK---GYVTPVKNQKQCGSCWAFSATGALEGQM--FRKTGKLVSLSEQNL 166
Query: 289 VSCS--QYAQGCEGGFPYLIAGKYAQDFGLVEEACFPYTGTDSPCKMKEDCFRYYSSEYH 346
V CS Q QGC GGF ++ GL E +PY D CK + + + +
Sbjct: 167 VDCSRPQGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAVDEICKYRPENSVANDTGFT 226
Query: 347 YVGGFYGGCNEALMKLELVHHGPMAVAFEV-YDDFLHYKKGIYHHTGLRDPFNPFELTNH 405
V G +ALMK + GP++VA + + F YK GIY +P + +H
Sbjct: 227 VVAP---GKEKALMKA-VATVGPISVAMDAGHSSFQFYKSGIYF-----EPDCSSKNLDH 277
Query: 406 AVLLVGYGTDSASGMD--YWIVKNSWGTGWGENGYFRIRRG-TDECAIESIA 454
VL+VGYG + A+ + YW+VKNSWG WG NGY +I + + C I + A
Sbjct: 278 GVLVVGYGFEGANSNNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAA 329
>gi|6042196 cathepsin F [Homo sapiens]
Length = 484
Score = 121 bits (304), Expect = 1e-27
Identities = 92/327 (28%), Positives = 153/327 (46%), Gaps = 37/327 (11%)
Query: 141 KVGTASENVYVNTAHLKNSQEKYSNRLYKYDHNFVKA--INAIQKS--------WTATTY 190
K+ + +N + S+E+ RL + +N V+A I A+ + ++ T
Sbjct: 182 KMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTE 241
Query: 191 MEYETLTLGDMIRRSGGHSRKIPRPKPAPLTAEIQQKILHLPTSWDWRNVHGINFVSPVR 250
E+ T+ L ++R+ G+ + K A ++ P WDWR+ V+ V+
Sbjct: 242 EEFRTIYLNTLLRKEPGN-----KMKQAKSVGDLA------PPEWDWRSKGA---VTKVK 287
Query: 251 NQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSQYAQGCEGGFPYLIAGKY 310
+Q CGSC++F+ G +E + + N LS QE++ C + + C GG P
Sbjct: 288 DQGMCGSCWAFSVTGNVEGQWFL--NQGTLLSLSEQELLDCDKMDKACMGGLPSNAYSAI 345
Query: 311 AQDFGLVEEACFPYTGTDSPCKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPM 370
GL E + Y G C + + Y ++ + NE + L GP+
Sbjct: 346 KNLGGLETEDDYSYQGHMQSCNFSAEKAKVYINDSVELSQ-----NEQKLAAWLAKRGPI 400
Query: 371 AVAFEVYDDFLHYKKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWG 430
+VA + Y+ GI LR +P+ L +HAVLLVGYG + S + +W +KNSWG
Sbjct: 401 SVAINAFG-MQFYRHGISRP--LRPLCSPW-LIDHAVLLVGYG--NRSDVPFWAIKNSWG 454
Query: 431 TGWGENGYFRIRRGTDECAIESIAVAA 457
T WGE GY+ + RG+ C + ++A +A
Sbjct: 455 TDWGEKGYYYLHRGSGACGVNTMASSA 481
>gi|22538442 cathepsin Z preproprotein [Homo sapiens]
Length = 303
Score = 118 bits (296), Expect = 1e-26
Identities = 77/228 (33%), Positives = 105/228 (46%), Gaps = 23/228 (10%)
Query: 231 LPTSWDWRNVHGINFVSPVRNQ---ASCGSCYSFASMGMLEARIRILTNNS-QTPILSPQ 286
LP SWDWRNV G+N+ S RNQ CGSC++ AS + RI I + + +LS Q
Sbjct: 62 LPKSWDWRNVDGVNYASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWPSTLLSVQ 121
Query: 287 EVVSCSQYAQGCEGGFPYLIAGKYAQDFGLVEEACFPYTGTDSPCKMKEDC-----FRYY 341
V+ C A CEGG L YA G+ +E C Y D C C F+
Sbjct: 122 NVIDCGN-AGSCEGGND-LSVWDYAHQHGIPDETCNNYQAKDQECDKFNQCGTCNEFKEC 179
Query: 342 SSEYHY----VGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYKKGIYHHTGLRDPF 397
+ +Y VG + M E+ +GP++ + +Y GIY +
Sbjct: 180 HAIRNYTLWRVGDYGSLSGREKMMAEIYANGPISCGIMATERLANYTGGIYAE------Y 233
Query: 398 NPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGT 445
NH V + G+G + G +YWIV+NSWG WGE G+ RI T
Sbjct: 234 QDTTYINHVVSVAGWGI--SDGTEYWIVRNSWGEPWGERGWLRIVTST 279
>gi|4503151 cathepsin K preproprotein [Homo sapiens]
Length = 329
Score = 117 bits (293), Expect = 2e-26
Identities = 91/304 (29%), Positives = 138/304 (45%), Gaps = 25/304 (8%)
Query: 158 NSQEKYSNRLYKYDHNFVKAINAIQKSWTATTYMEYETLTLGDMIRRSGGHSRKIPRPKP 217
N ++ S RL + +I+ ++ S TY E LGDM S +K+ K
Sbjct: 39 NKVDEISRRLIWEKNLKYISIHNLEASLGVHTY-ELAMNHLGDMT--SEEVVQKMTGLK- 94
Query: 218 APLTAEIQQKILHLPTSWDWRNVHGINF-----VSPVRNQASCGSCYSFASMGMLEARIR 272
PL+ L++P W+ R +++ V+PV+NQ CGSC++F+S+G LE +++
Sbjct: 95 VPLSHSRSNDTLYIP-EWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLK 153
Query: 273 ILTNNSQTPILSPQEVVSCSQYAQGCEGGFPYLIAGKYAQDFGLVEEACFPYTGTDSPCK 332
T LSPQ +V C GC GG+ ++ G+ E +PY G + C
Sbjct: 154 KKTGKLLN--LSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCM 211
Query: 333 MKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEV-YDDFLHYKKGIYHHT 391
Y + NE +K + GP++VA + F Y KG+Y+
Sbjct: 212 YNPTGKAAKCRGYREI----PEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDE 267
Query: 392 GLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRG-TDECAI 450
+ NHAVL VGYG G +WI+KNSWG WG GY + R + C I
Sbjct: 268 SCNS-----DNLNHAVLAVGYGIQ--KGNKHWIIKNSWGENWGNKGYILMARNKNNACGI 320
Query: 451 ESIA 454
++A
Sbjct: 321 ANLA 324
>gi|22202619 cathepsin L1 preproprotein [Homo sapiens]
Length = 333
Score = 117 bits (293), Expect = 2e-26
Identities = 86/234 (36%), Positives = 121/234 (51%), Gaps = 31/234 (13%)
Query: 232 PTSWDWRNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSC 291
P S DWR +V+PV+NQ CGSC++F++ G LE ++ + LS Q +V C
Sbjct: 115 PRSVDWREK---GYVTPVKNQGQCGSCWAFSATGALEGQM--FRKTGRLISLSEQNLVDC 169
Query: 292 S--QYAQGCEGGFPYLIAGKYAQDFG-LVEEACFPYTGTDSPCKMKEDCFRYYSSEYHYV 348
S Q +GC GG A +Y QD G L E +PY T+ CK Y+ +Y
Sbjct: 170 SGPQGNEGCNGGLMDY-AFQYVQDNGGLDSEESYPYEATEESCK--------YNPKYSVA 220
Query: 349 G--GFYG--GCNEALMKLELVHHGPMAVAFEV-YDDFLHYKKGIYHHTGLRDPFNPFELT 403
GF +ALMK + GP++VA + ++ FL YK+GIY +P E
Sbjct: 221 NDTGFVDIPKQEKALMKA-VATVGPISVAIDAGHESFLFYKEGIYF-----EPDCSSEDM 274
Query: 404 NHAVLLVGYGTDSASGMD--YWIVKNSWGTGWGENGYFRIRRG-TDECAIESIA 454
+H VL+VGYG +S + YW+VKNSWG WG GY ++ + + C I S A
Sbjct: 275 DHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAA 328
>gi|4503155 cathepsin L1 preproprotein [Homo sapiens]
Length = 333
Score = 117 bits (293), Expect = 2e-26
Identities = 86/234 (36%), Positives = 121/234 (51%), Gaps = 31/234 (13%)
Query: 232 PTSWDWRNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSC 291
P S DWR +V+PV+NQ CGSC++F++ G LE ++ + LS Q +V C
Sbjct: 115 PRSVDWREK---GYVTPVKNQGQCGSCWAFSATGALEGQM--FRKTGRLISLSEQNLVDC 169
Query: 292 S--QYAQGCEGGFPYLIAGKYAQDFG-LVEEACFPYTGTDSPCKMKEDCFRYYSSEYHYV 348
S Q +GC GG A +Y QD G L E +PY T+ CK Y+ +Y
Sbjct: 170 SGPQGNEGCNGGLMDY-AFQYVQDNGGLDSEESYPYEATEESCK--------YNPKYSVA 220
Query: 349 G--GFYG--GCNEALMKLELVHHGPMAVAFEV-YDDFLHYKKGIYHHTGLRDPFNPFELT 403
GF +ALMK + GP++VA + ++ FL YK+GIY +P E
Sbjct: 221 NDTGFVDIPKQEKALMKA-VATVGPISVAIDAGHESFLFYKEGIYF-----EPDCSSEDM 274
Query: 404 NHAVLLVGYGTDSASGMD--YWIVKNSWGTGWGENGYFRIRRG-TDECAIESIA 454
+H VL+VGYG +S + YW+VKNSWG WG GY ++ + + C I S A
Sbjct: 275 DHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAA 328
>gi|23110962 cathepsin S preproprotein [Homo sapiens]
Length = 331
Score = 116 bits (291), Expect = 4e-26
Identities = 76/227 (33%), Positives = 118/227 (51%), Gaps = 22/227 (9%)
Query: 231 LPTSWDWRNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVS 290
LP S DWR V+ V+ Q SCG+C++F+++G LEA++++ T + LS Q +V
Sbjct: 115 LPDSVDWREK---GCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVS--LSAQNLVD 169
Query: 291 CS--QYA-QGCEGGFPYLIAGKYAQDFGLVEEACFPYTGTDSPCKMKEDCFRYYSSEYHY 347
CS +Y +GC GGF + G+ +A +PY D C+ S+Y
Sbjct: 170 CSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTE 229
Query: 348 VGGFYGGCNEALMKLELVHHGPMAVAFEV-YDDFLHYKKGIYHHTGLRDPFNPFELTNHA 406
+ YG E ++K + + GP++V + + F Y+ G+Y+ + NH
Sbjct: 230 LP--YG--REDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCT------QNVNHG 279
Query: 407 VLLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGT-DECAIES 452
VL+VGYG +G +YW+VKNSWG +GE GY R+ R + C I S
Sbjct: 280 VLVVGYG--DLNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIAS 324
>gi|23110964 cathepsin W preproprotein [Homo sapiens]
Length = 376
Score = 107 bits (267), Expect = 2e-23
Identities = 92/330 (27%), Positives = 147/330 (44%), Gaps = 54/330 (16%)
Query: 159 SQEKYSNRLYKYDHNFVKAINAIQKS-----WTATTYMEYETLTLGDMI---RRSGGHSR 210
S E++++RL + HN +A ++ + T + + G + R +GG
Sbjct: 55 SPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEFGQLYGYRRAAGG--- 111
Query: 211 KIPRPKPAPLTAEIQQKILHLPTSWDWRNVHGINFVSPVRNQASCGSCYSFASMGMLEAR 270
+P + E ++ + P S DWR V G +SP+++Q +C C++ A+ G +E
Sbjct: 112 -VPSMGREIRSEEPEESV---PFSCDWRKVAGA--ISPIKDQKNCNCCWAMAAAGNIETL 165
Query: 271 IRILTNNSQTPILSPQEVVSCSQYAQGCEGGFPYLIAGKYAQDFGLVEEACFPYTGTDSP 330
RI + +S QE++ C + GC GGF + + GL E +P+ G
Sbjct: 166 WRISFWDFVD--VSVQELLDCGRCGDGCHGGFVWDAFITVLNNSGLASEKDYPFQG---- 219
Query: 331 CKMKEDCFRYYSSEYHYVGGFYGGC----NEALMKLELVHHGPMAVAFEVYDDFLHYKKG 386
K R + +Y V NE + L +GP+ V + L Y+KG
Sbjct: 220 ---KVRAHRCHPKKYQKVAWIQDFIMLQNNEHRIAQYLATYGPITVTINMKPLQL-YRKG 275
Query: 387 IYHHTGLR-DPFNPFELTNHAVLLVGYGT-DSASGM-----------------DYWIVKN 427
+ T DP +L +H+VLLVG+G+ S G+ YWI+KN
Sbjct: 276 VIKATPTTCDP----QLVDHSVLLVGFGSVKSEEGIWAETVSSQSQPQPPHPTPYWILKN 331
Query: 428 SWGTGWGENGYFRIRRGTDECAIESIAVAA 457
SWG WGE GYFR+ RG++ C I + A
Sbjct: 332 SWGAQWGEKGYFRLHRGSNTCGITKFPLTA 361
>gi|4557501 cathepsin O preproprotein [Homo sapiens]
Length = 321
Score = 95.9 bits (237), Expect = 7e-20
Identities = 72/244 (29%), Positives = 112/244 (45%), Gaps = 24/244 (9%)
Query: 214 RPKPAPL---TAEIQQKI--LHLPTSWDWRNVHGINFVSPVRNQASCGSCYSFASMGMLE 268
R KP+ +AE+ I + LP +DWR+ V+ VRNQ CG C++F+ +G +E
Sbjct: 86 RSKPSKFPRYSAEVHMSIPNVSLPLRFDWRDKQ---VVTQVRNQQMCGGCWAFSVVGAVE 142
Query: 269 ARIRILTNNSQTPILSPQEVVSCSQYAQGCEGGFPY-LIAGKYAQDFGLVEEACFPYTGT 327
+ I LS Q+V+ CS GC GG + LV+++ +P+
Sbjct: 143 SAYAI--KGKPLEDLSVQQVIDCSYNNYGCNGGSTLNALNWLNKMQVKLVKDSEYPFKAQ 200
Query: 328 DSPCKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYKKGI 387
+ C +S + + F +E M L+ GP+ V + + Y GI
Sbjct: 201 NGLCHYFSGSHSGFSIKGYSAYDFSDQEDE--MAKALLTFGPLVVIVDAVS-WQDYLGGI 257
Query: 388 Y-HHTGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGTD 446
HH + NHAVL+ G+ D YWIV+NSWG+ WG +GY ++ G++
Sbjct: 258 IQHHCSSGE-------ANHAVLITGF--DKTGSTPYWIVRNSWGSSWGVDGYAHVKMGSN 308
Query: 447 ECAI 450
C I
Sbjct: 309 VCGI 312
>gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transferase
4 [Homo sapiens]
Length = 1039
Score = 29.3 bits (64), Expect = 7.9
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Query: 204 RSGGHSRKIPRPKPAPLTAEIQQKILHLPTSWDWRNVHGINFVSPVRNQASCGSCYSFAS 263
R G + P P PA + L P WR ++F+ PV+NQA + + A
Sbjct: 785 RVGDADGESPEPAPAASVRPDGRPELCRPLRLAWRQDVMVHFIVPVKNQARWVAQF-LAD 843
Query: 264 MGMLEAR 270
M L AR
Sbjct: 844 MAALHAR 850
>gi|127139033 cytochrome P450 reductase [Homo sapiens]
Length = 680
Score = 29.3 bits (64), Expect = 7.9
Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 25/82 (30%)
Query: 101 WFAFFKYKEEGSKVTTYCNETMTGWVHDV--------LGRNWACFTGKKVGTASENVYVN 152
WF F K KEE + T +T+T V + GRN F G + GTA
Sbjct: 44 WFLFRKKKEEVPEFTKI--QTLTSSVRESSFVEKMKKTGRNIIVFYGSQTGTA------- 94
Query: 153 TAHLKNSQEKYSNRLYKYDHNF 174
E+++NRL K H +
Sbjct: 95 --------EEFANRLSKDAHRY 108
>gi|38570109 CAP-binding protein complex interacting protein 1
isoform b [Homo sapiens]
Length = 1349
Score = 29.3 bits (64), Expect = 7.9
Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 20/125 (16%)
Query: 227 KILHLPTSWDWRN----VHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPI 282
++ HL SW ++ ++F+ V N S G+ M I T N Q +
Sbjct: 852 ELTHLLNSWGVSRHDNAINYLDFLRAVENSKSTGAQPKEKEESM---PINFATLNPQEAV 908
Query: 283 LSPQEVVSCSQYAQGCEGGFPYLIAGKYAQDFGLVEEACFPYTGTDSPCKMKEDCFRYYS 342
QEVV SQ A + +D G V+ F +K+ C++
Sbjct: 909 RKIQEVVESSQLALSTA------FSALDKEDTGFVKATEFGQV-------LKDFCYKLTD 955
Query: 343 SEYHY 347
++YHY
Sbjct: 956 NQYHY 960
>gi|38570107 CAP-binding protein complex interacting protein 1 isoform
a [Homo sapiens]
Length = 1501
Score = 29.3 bits (64), Expect = 7.9
Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 20/125 (16%)
Query: 227 KILHLPTSWDWRN----VHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPI 282
++ HL SW ++ ++F+ V N S G+ M I T N Q +
Sbjct: 1004 ELTHLLNSWGVSRHDNAINYLDFLRAVENSKSTGAQPKEKEESM---PINFATLNPQEAV 1060
Query: 283 LSPQEVVSCSQYAQGCEGGFPYLIAGKYAQDFGLVEEACFPYTGTDSPCKMKEDCFRYYS 342
QEVV SQ A + +D G V+ F +K+ C++
Sbjct: 1061 RKIQEVVESSQLALSTA------FSALDKEDTGFVKATEFGQV-------LKDFCYKLTD 1107
Query: 343 SEYHY 347
++YHY
Sbjct: 1108 NQYHY 1112
>gi|21450781 hypothetical protein LOC91775 [Homo sapiens]
Length = 559
Score = 29.3 bits (64), Expect = 7.9
Identities = 29/137 (21%), Positives = 50/137 (36%), Gaps = 20/137 (14%)
Query: 115 TTYCNETMTG------WVHDVLGRNWACFTGKKVGTASENVYVNTAHLKNSQEKYSNRLY 168
TT CN + G + G W CF KK+ +S + +LK + +
Sbjct: 222 TTECNVCLPGNLPLCNFTDLYTGEPWFCFKPKKLPCSSRITHFKGGYLKGLLTAAESAFF 281
Query: 169 KYDHNFVKAINAIQKSWTATTYMEYE-----TLTLGDMIRRSGGHSRKIPRPK------- 216
+ N +N+ W + L+ G SG + + RP+
Sbjct: 282 QSGVNIKMPVNSSGPDWVTVIPRRIKETNSLELSQGSGTFPSGYYYKDQWRPRKFKMRQF 341
Query: 217 --PAPLTAEIQQKILHL 231
P +T +Q+K++HL
Sbjct: 342 NDPDNITECLQRKVVHL 358
>gi|197333800 hypothetical protein LOC91775 [Homo sapiens]
Length = 559
Score = 29.3 bits (64), Expect = 7.9
Identities = 29/137 (21%), Positives = 50/137 (36%), Gaps = 20/137 (14%)
Query: 115 TTYCNETMTG------WVHDVLGRNWACFTGKKVGTASENVYVNTAHLKNSQEKYSNRLY 168
TT CN + G + G W CF KK+ +S + +LK + +
Sbjct: 222 TTECNVCLPGNLPLCNFTDLYTGEPWFCFKPKKLPCSSRITHFKGGYLKGLLTAAESAFF 281
Query: 169 KYDHNFVKAINAIQKSWTATTYMEYE-----TLTLGDMIRRSGGHSRKIPRPK------- 216
+ N +N+ W + L+ G SG + + RP+
Sbjct: 282 QSGVNIKMPVNSSGPDWVTVIPRRIKETNSLELSQGSGTFPSGYYYKDQWRPRKFKMRQF 341
Query: 217 --PAPLTAEIQQKILHL 231
P +T +Q+K++HL
Sbjct: 342 NDPDNITECLQRKVVHL 358
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.136 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,049,473
Number of Sequences: 37866
Number of extensions: 906938
Number of successful extensions: 1807
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1730
Number of HSP's gapped (non-prelim): 28
length of query: 463
length of database: 18,247,518
effective HSP length: 106
effective length of query: 357
effective length of database: 14,233,722
effective search space: 5081438754
effective search space used: 5081438754
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.