Guide to the Human Genome
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Name: CTSC Sequence: fasta or formatted (141aa) NCBI GI: 167000671
Description:

cathepsin C isoform c precursor

Referenced in:

Cysteine Proteases

Other entries for this name:
alt prot [463aa] cathepsin C isoform a preproprotein
alt prot [137aa] cathepsin C isoform b precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7          8           2
 C cysteine            2.1          3           1
 D aspartate           7.8         11           2
 E glutamate           1.4          2           1
 F phenylalanine       5.7          8           2
 G glycine             9.9         14           1
 H histidine           2.1          3           1
 I isoleucine          3.5          5           2
 K lysine              4.3          6           2
 L leucine            14.2         20           5
 M methionine          2.8          4           1
 N asparagine          5.0          7           1
 P proline             2.8          4           1
 Q glutamine           4.3          6           1
 R arginine            3.5          5           2
 S serine              5.7          8           2
 T threonine           5.0          7           1
 V valine              7.8         11           3
 W tryptophan          2.1          3           1
 Y tyrosine            4.3          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cathepsin C isoform c precursor 
CTSC                  0.941   cathepsin C isoform b precursor 
CTSC                  0.729   cathepsin C isoform a preproprotein 
EPHA2                 0.011   ephrin receptor EphA2 
CD7                   0.007   CD7 antigen precursor 
PRKCSH                0.007   protein kinase C substrate 80K-H isoform 2 
PRKCSH                0.007   protein kinase C substrate 80K-H isoform 1 
ZFX                   0.007   zinc finger protein, X-linked 
TYRO3                 0.007   TYRO3 protein tyrosine kinase 
RNF113A               0.007   ring finger protein 113A 
PFTK1                 0.004   PFTAIRE protein kinase 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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