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Search of human proteins with 187761381
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|187761381 maestro isoform d [Homo sapiens]
(262 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|187761381 maestro isoform d [Homo sapiens] 527 e-150
gi|187761375 maestro isoform a [Homo sapiens] 432 e-121
gi|187761379 maestro isoform c [Homo sapiens] 321 5e-88
gi|187761377 maestro isoform b [Homo sapiens] 226 2e-59
gi|154240671 HEAT repeat family member 7B2 [Homo sapiens] 142 2e-34
gi|239753442 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens] 100 2e-21
gi|239748007 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens] 100 2e-21
gi|239741905 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens] 100 2e-21
gi|113420243 PREDICTED: hypothetical protein LOC377711 isoform 5... 75 8e-14
gi|150010654 HEAT repeat containing 7A isoform 1 [Homo sapiens] 75 8e-14
gi|148727311 hypothetical protein LOC389690 [Homo sapiens] 73 3e-13
gi|194595501 hypothetical protein LOC140699 isoform 1 [Homo sapi... 34 0.15
gi|4826730 FK506 binding protein 12-rapamycin associated protein... 32 0.43
gi|209969838 transportin 2 (importin 3, karyopherin beta 2b) iso... 31 1.3
gi|209969836 transportin 2 (importin 3, karyopherin beta 2b) iso... 31 1.3
gi|48675813 transportin 2 (importin 3, karyopherin beta 2b) isof... 31 1.3
gi|118498337 HECT domain containing 1 [Homo sapiens] 30 1.6
gi|157743280 parahox cluster neighbor [Homo sapiens] 30 1.6
gi|4506411 Ran GTPase activating protein 1 [Homo sapiens] 30 2.8
gi|13376768 elongation factor RNA polymerase II-like 3 [Homo sap... 30 2.8
gi|23510381 transportin 1 isoform 2 [Homo sapiens] 29 3.6
gi|133925811 transportin 1 isoform 1 [Homo sapiens] 29 3.6
gi|48762926 PWP2 periodic tryptophan protein homolog [Homo sapiens] 29 4.8
gi|144226251 chitinase 3-like 1 [Homo sapiens] 28 6.2
gi|239750109 PREDICTED: similar to unc-93 homolog B1 (C. elegans... 28 6.2
gi|239744415 PREDICTED: similar to unc-93 homolog B1 (C. elegans... 28 6.2
gi|7706575 transmembrane 7 superfamily member 3 [Homo sapiens] 28 6.2
gi|154350244 hypothetical protein LOC79632 isoform 2 [Homo sapiens] 28 6.2
gi|154350226 hypothetical protein LOC79632 isoform 1 [Homo sapiens] 28 6.2
gi|7669528 neuregulin 2 isoform 2 [Homo sapiens] 28 8.1
>gi|187761381 maestro isoform d [Homo sapiens]
Length = 262
Score = 527 bits (1357), Expect = e-150
Identities = 262/262 (100%), Positives = 262/262 (100%)
Query: 1 MAWGSKGIQGWENLAESSHLATTRESSPPESGTGSGSSRGSRLQEPQVSWKLRFQKREPL 60
MAWGSKGIQGWENLAESSHLATTRESSPPESGTGSGSSRGSRLQEPQVSWKLRFQKREPL
Sbjct: 1 MAWGSKGIQGWENLAESSHLATTRESSPPESGTGSGSSRGSRLQEPQVSWKLRFQKREPL 60
Query: 61 KNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLEV 120
KNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLEV
Sbjct: 61 KNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLEV 120
Query: 121 IHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDENDSLRYSAFVLFGQLAAFAGRK 180
IHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDENDSLRYSAFVLFGQLAAFAGRK
Sbjct: 121 IHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDENDSLRYSAFVLFGQLAAFAGRK 180
Query: 181 WKKFFTSQVKQTRDSLLIHLQDRNPQVAKACKTTFQACSPYLKLKEEYSFQSEEDQRNTK 240
WKKFFTSQVKQTRDSLLIHLQDRNPQVAKACKTTFQACSPYLKLKEEYSFQSEEDQRNTK
Sbjct: 181 WKKFFTSQVKQTRDSLLIHLQDRNPQVAKACKTTFQACSPYLKLKEEYSFQSEEDQRNTK 240
Query: 241 LYQQLSHYHPEILQFFYANKIL 262
LYQQLSHYHPEILQFFYANKIL
Sbjct: 241 LYQQLSHYHPEILQFFYANKIL 262
>gi|187761375 maestro isoform a [Homo sapiens]
Length = 248
Score = 432 bits (1111), Expect = e-121
Identities = 215/216 (99%), Positives = 216/216 (100%)
Query: 47 QVSWKLRFQKREPLKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLD 106
+VSWKLRFQKREPLKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLD
Sbjct: 33 KVSWKLRFQKREPLKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLD 92
Query: 107 LLVYGLYDPVNLEVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDENDSLRYSA 166
LLVYGLYDPVNLEVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDENDSLRYSA
Sbjct: 93 LLVYGLYDPVNLEVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDENDSLRYSA 152
Query: 167 FVLFGQLAAFAGRKWKKFFTSQVKQTRDSLLIHLQDRNPQVAKACKTTFQACSPYLKLKE 226
FVLFGQLAAFAGRKWKKFFTSQVKQTRDSLLIHLQDRNPQVAKACKTTFQACSPYLKLKE
Sbjct: 153 FVLFGQLAAFAGRKWKKFFTSQVKQTRDSLLIHLQDRNPQVAKACKTTFQACSPYLKLKE 212
Query: 227 EYSFQSEEDQRNTKLYQQLSHYHPEILQFFYANKIL 262
EYSFQSEEDQRNTKLYQQLSHYHPEILQFFYANKIL
Sbjct: 213 EYSFQSEEDQRNTKLYQQLSHYHPEILQFFYANKIL 248
>gi|187761379 maestro isoform c [Homo sapiens]
Length = 210
Score = 321 bits (822), Expect = 5e-88
Identities = 180/262 (68%), Positives = 186/262 (70%), Gaps = 52/262 (19%)
Query: 1 MAWGSKGIQGWENLAESSHLATTRESSPPESGTGSGSSRGSRLQEPQVSWKLRFQKREPL 60
MAWGSKGIQGWENLAESSHLATTRESSPPESGTGSGSSRGSRLQEPQVSWKLRFQKREPL
Sbjct: 1 MAWGSKGIQGWENLAESSHLATTRESSPPESGTGSGSSRGSRLQEPQVSWKLRFQKREPL 60
Query: 61 KNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLEV 120
KNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLEV
Sbjct: 61 KNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLEV 120
Query: 121 IHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDENDSLRYSAFVLFGQLAAFAGRK 180
IHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDD + F + + K
Sbjct: 121 IHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDD-------ACKTTFQACSPYLKLK 173
Query: 181 WKKFFTSQVKQTRDSLLIHLQDRNPQVAKACKTTFQACSPYLKLKEEYSFQSEEDQRNTK 240
+ F S+ Q L +Q S Y
Sbjct: 174 EEYSFQSEEDQRNTKL------------------YQQLSHY------------------- 196
Query: 241 LYQQLSHYHPEILQFFYANKIL 262
HPEILQFFYANKIL
Sbjct: 197 --------HPEILQFFYANKIL 210
>gi|187761377 maestro isoform b [Homo sapiens]
Length = 196
Score = 226 bits (576), Expect = 2e-59
Identities = 133/216 (61%), Positives = 140/216 (64%), Gaps = 52/216 (24%)
Query: 47 QVSWKLRFQKREPLKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLD 106
+VSWKLRFQKREPLKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLD
Sbjct: 33 KVSWKLRFQKREPLKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLD 92
Query: 107 LLVYGLYDPVNLEVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDENDSLRYSA 166
LLVYGLYDPVNLEVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDD +
Sbjct: 93 LLVYGLYDPVNLEVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDD-------AC 145
Query: 167 FVLFGQLAAFAGRKWKKFFTSQVKQTRDSLLIHLQDRNPQVAKACKTTFQACSPYLKLKE 226
F + + K + F S+ Q L +Q S Y
Sbjct: 146 KTTFQACSPYLKLKEEYSFQSEEDQRNTKL------------------YQQLSHY----- 182
Query: 227 EYSFQSEEDQRNTKLYQQLSHYHPEILQFFYANKIL 262
HPEILQFFYANKIL
Sbjct: 183 ----------------------HPEILQFFYANKIL 196
>gi|154240671 HEAT repeat family member 7B2 [Homo sapiens]
Length = 1585
Score = 142 bits (359), Expect = 2e-34
Identities = 75/203 (36%), Positives = 118/203 (58%), Gaps = 5/203 (2%)
Query: 26 SSPPESGTGSGSSRGSRLQEPQVSWKLRFQKREPLKNVFFILAERARDPSAKKRHMAMRN 85
+S E+ +G++ S L + + WK L+NV ++ + A D +A R MA+R
Sbjct: 1272 TSSSENYRITGAAFFSELMKEPILWK-----HGNLRNVLILMDQSAWDSNATLRQMAIRG 1326
Query: 86 LGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLEVIHESMKTLTVVLGKIQGKGLGSFFI 145
LG A AP KV+K+K+++L+ ++ GLY EV+ ES+K L +L + + + +F
Sbjct: 1327 LGNTASGAPHKVKKHKQLMLESIIRGLYHLARTEVVCESLKALKKILELLTDRDVSFYFK 1386
Query: 146 DITLQTRTLLDDENDSLRYSAFVLFGQLAAFAGRKWKKFFTSQVKQTRDSLLIHLQDRNP 205
+I LQTRT +DE D +R +A LF LA GR+WK FF ++K++ S L+HL D NP
Sbjct: 1387 EIVLQTRTFFEDEQDDVRLTAIFLFEDLAPLTGRRWKIFFAEEIKKSLISFLLHLWDPNP 1446
Query: 206 QVAKACKTTFQACSPYLKLKEEY 228
++ AC+ C P+L L+E Y
Sbjct: 1447 KIGVACRDVLMVCIPFLGLQELY 1469
>gi|239753442 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]
Length = 1723
Score = 100 bits (248), Expect = 2e-21
Identities = 58/164 (35%), Positives = 92/164 (56%), Gaps = 2/164 (1%)
Query: 57 REPLKNVFFILAERARDPSAKK--RHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYD 114
+E L +L E+ D + R +++R LG MA AP KV++Y+K++L+ + L +
Sbjct: 1420 QEKLLKPAALLLEKGADQEEDEALRVLSLRALGNMALGAPKKVKQYRKVLLEKCLGPLRE 1479
Query: 115 PVNLEVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDENDSLRYSAFVLFGQLA 174
PV+ V E M+ LT +L +++ +GS F ++ Q R D+E++ LR AF+LFG+LA
Sbjct: 1480 PVSNSVTAEGMEALTKILAELREGDVGSSFDAMSEQCRIFFDNESELLRLKAFILFGKLA 1539
Query: 175 AFAGRKWKKFFTSQVKQTRDSLLIHLQDRNPQVAKACKTTFQAC 218
G K FF +VK+ L++H QD A+AC T C
Sbjct: 1540 RVVGMSKKHFFKGEVKKAWIPLMLHSQDPCSNAAQACMATMFQC 1583
>gi|239748007 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]
Length = 1706
Score = 100 bits (248), Expect = 2e-21
Identities = 58/164 (35%), Positives = 92/164 (56%), Gaps = 2/164 (1%)
Query: 57 REPLKNVFFILAERARDPSAKK--RHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYD 114
+E L +L E+ D + R +++R LG MA AP KV++Y+K++L+ + L +
Sbjct: 1412 QEKLLKPAALLLEKGADQEEDEALRVLSLRALGNMALGAPKKVKQYRKVLLEKCLGPLRE 1471
Query: 115 PVNLEVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDENDSLRYSAFVLFGQLA 174
PV+ V E M+ LT +L +++ +GS F ++ Q R D+E++ LR AF+LFG+LA
Sbjct: 1472 PVSNSVTAEGMEALTKILAELREGDVGSSFDAMSEQCRIFFDNESELLRLKAFILFGKLA 1531
Query: 175 AFAGRKWKKFFTSQVKQTRDSLLIHLQDRNPQVAKACKTTFQAC 218
G K FF +VK+ L++H QD A+AC T C
Sbjct: 1532 RVVGMSKKHFFKGEVKKAWIPLMLHSQDPCSNAAQACMATMFQC 1575
>gi|239741905 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]
Length = 1710
Score = 100 bits (248), Expect = 2e-21
Identities = 58/164 (35%), Positives = 92/164 (56%), Gaps = 2/164 (1%)
Query: 57 REPLKNVFFILAERARDPSAKK--RHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYD 114
+E L +L E+ D + R +++R LG MA AP KV++Y+K++L+ + L +
Sbjct: 1416 QEKLLKPAALLLEKGADQEEDEALRVLSLRALGNMALGAPKKVKQYRKVLLEKCLGPLRE 1475
Query: 115 PVNLEVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDENDSLRYSAFVLFGQLA 174
PV+ V E M+ LT +L +++ +GS F ++ Q R D+E++ LR AF+LFG+LA
Sbjct: 1476 PVSNSVTAEGMEALTKILAELREGDVGSSFDAMSEQCRIFFDNESELLRLKAFILFGKLA 1535
Query: 175 AFAGRKWKKFFTSQVKQTRDSLLIHLQDRNPQVAKACKTTFQAC 218
G K FF +VK+ L++H QD A+AC T C
Sbjct: 1536 RVVGMSKKHFFKGEVKKAWIPLMLHSQDPCSNAAQACMATMFQC 1579
>gi|113420243 PREDICTED: hypothetical protein LOC377711 isoform 5
[Homo sapiens]
Length = 1218
Score = 74.7 bits (182), Expect = 8e-14
Identities = 56/198 (28%), Positives = 87/198 (43%), Gaps = 11/198 (5%)
Query: 67 LAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLE--VIHES 124
LA R +D A R + +R L +A PDKVR + +L ++ GL D N V E+
Sbjct: 945 LAARQKDTCASVRRLVLRGLANLASGCPDKVRTHGPQLLTAMIGGLDDGDNPHSPVALEA 1004
Query: 125 MKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDENDSLRYSAFVLFGQLAAFAGRKWKKF 184
M L ++ ++ L S + + ++ R D E R ++ LFG L +
Sbjct: 1005 MLGLARLVHLVESWDLRSGLLHVAIRIRPFFDSEKMEFRTASIRLFGHLNKVCHGDCEDV 1064
Query: 185 FTSQVKQTRDSLLIHLQDRNPQVAKACKTTFQACSPYLKLKEEYSFQSEEDQRNTKLY-- 242
F QV LL+HLQD VA AC+ + C P L +E + + Q L+
Sbjct: 1065 FLDQVVGGLAPLLLHLQDPQATVASACRFALRMCGPNLACEELSAAFQKHLQEGRALHFG 1124
Query: 243 -------QQLSHYHPEIL 253
+ L H+ P++L
Sbjct: 1125 EFLNTTCKHLMHHFPDLL 1142
>gi|150010654 HEAT repeat containing 7A isoform 1 [Homo sapiens]
Length = 1641
Score = 74.7 bits (182), Expect = 8e-14
Identities = 56/198 (28%), Positives = 87/198 (43%), Gaps = 11/198 (5%)
Query: 67 LAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLE--VIHES 124
LA R +D A R + +R L +A PDKVR + +L ++ GL D N V E+
Sbjct: 1368 LAARQKDTCASVRRLVLRGLANLASGCPDKVRTHGPQLLTAMIGGLDDGDNPHSPVALEA 1427
Query: 125 MKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDENDSLRYSAFVLFGQLAAFAGRKWKKF 184
M L ++ ++ L S + + ++ R D E R ++ LFG L +
Sbjct: 1428 MLGLARLVHLVESWDLRSGLLHVAIRIRPFFDSEKMEFRTASIRLFGHLNKVCHGDCEDV 1487
Query: 185 FTSQVKQTRDSLLIHLQDRNPQVAKACKTTFQACSPYLKLKEEYSFQSEEDQRNTKLY-- 242
F QV LL+HLQD VA AC+ + C P L +E + + Q L+
Sbjct: 1488 FLDQVVGGLAPLLLHLQDPQATVASACRFALRMCGPNLACEELSAAFQKHLQEGRALHFG 1547
Query: 243 -------QQLSHYHPEIL 253
+ L H+ P++L
Sbjct: 1548 EFLNTTCKHLMHHFPDLL 1565
>gi|148727311 hypothetical protein LOC389690 [Homo sapiens]
Length = 1318
Score = 72.8 bits (177), Expect = 3e-13
Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 3/165 (1%)
Query: 59 PLKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNL 118
P + +LA+ DPS + R ++++ L + + PDK + + LL G + +
Sbjct: 1038 PKQAALTVLAQGLHDPSPEVRVLSLQGLSNILFH-PDKGSLLQGQLRPLLD-GFFQSSD- 1094
Query: 119 EVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDENDSLRYSAFVLFGQLAAFAG 178
+VI M T++ L ++ +G GS + + + TR+ +DE D +R +A LFG L A
Sbjct: 1095 QVIVCIMGTVSDTLHRLGAQGTGSQSLGVAISTRSFFNDERDGIRAAAMALFGDLVAAMA 1154
Query: 179 RKWKKFFTSQVKQTRDSLLIHLQDRNPQVAKACKTTFQACSPYLK 223
+ +QV Q+ LL+HL+D+ P VA K TF C+ L+
Sbjct: 1155 DRELSGLRTQVHQSMVPLLLHLKDQCPAVATQAKFTFYRCAVLLR 1199
>gi|194595501 hypothetical protein LOC140699 isoform 1 [Homo
sapiens]
Length = 1052
Score = 33.9 bits (76), Expect = 0.15
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Query: 144 FIDITLQTRTLL----DDENDSLRYSAFVLFGQLAAFAGRKWKKFFTSQVKQTRDSLLIH 199
F + RTL D +D R+S LFG KK +QV + LL++
Sbjct: 839 FTTLAAMMRTLFSLFGDVRSDVHRFSV-TLFGAAIKSVKNPDKKSIENQVLDSLVPLLLY 897
Query: 200 LQDRNPQVAKACKTTFQACSPYLKLK 225
QD N VA+ + C+ +LK K
Sbjct: 898 SQDENDAVAEESRQVLTICAQFLKWK 923
>gi|4826730 FK506 binding protein 12-rapamycin associated protein 1
[Homo sapiens]
Length = 2549
Score = 32.3 bits (72), Expect = 0.43
Identities = 38/126 (30%), Positives = 52/126 (41%), Gaps = 13/126 (10%)
Query: 61 KNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDP---VN 117
K + IL E + + + R LG + AP +R Y + +L L+ L DP N
Sbjct: 732 KMLIQILTELEHSGIGRIKEQSARMLGHLVSNAPRLIRPYMEPILKALILKLKDPDPDPN 791
Query: 118 LEVIHESMKT---LTVVLGKIQGKGLGSFFIDI--TLQTRTLLDDENDSLRYSAFVLFGQ 172
VI+ + T L V G K + FI I LQ +LL + R A GQ
Sbjct: 792 PGVINNVLATIGELAQVSGLEMRKWVDELFIIIMDMLQDSSLL-----AKRQVALWTLGQ 846
Query: 173 LAAFAG 178
L A G
Sbjct: 847 LVASTG 852
>gi|209969838 transportin 2 (importin 3, karyopherin beta 2b)
isoform 1 [Homo sapiens]
Length = 897
Score = 30.8 bits (68), Expect = 1.3
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 60 LKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLV--YGLYDPVN 117
LK + L +R D + + + A T+ EA ++ Y +LD LV +G Y N
Sbjct: 475 LKPLMTELLKRILDGNKRVQEAACSAFATLEEEACTELVPYLSYILDTLVFAFGKYQHKN 534
Query: 118 LEVIHESMKTLTVVLG 133
L ++++++ TL +G
Sbjct: 535 LLILYDAIGTLADSVG 550
>gi|209969836 transportin 2 (importin 3, karyopherin beta 2b)
isoform 3 [Homo sapiens]
Length = 887
Score = 30.8 bits (68), Expect = 1.3
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 60 LKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLV--YGLYDPVN 117
LK + L +R D + + + A T+ EA ++ Y +LD LV +G Y N
Sbjct: 475 LKPLMTELLKRILDGNKRVQEAACSAFATLEEEACTELVPYLSYILDTLVFAFGKYQHKN 534
Query: 118 LEVIHESMKTLTVVLG 133
L ++++++ TL +G
Sbjct: 535 LLILYDAIGTLADSVG 550
>gi|48675813 transportin 2 (importin 3, karyopherin beta 2b) isoform
2 [Homo sapiens]
Length = 887
Score = 30.8 bits (68), Expect = 1.3
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 60 LKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLV--YGLYDPVN 117
LK + L +R D + + + A T+ EA ++ Y +LD LV +G Y N
Sbjct: 475 LKPLMTELLKRILDGNKRVQEAACSAFATLEEEACTELVPYLSYILDTLVFAFGKYQHKN 534
Query: 118 LEVIHESMKTLTVVLG 133
L ++++++ TL +G
Sbjct: 535 LLILYDAIGTLADSVG 550
>gi|118498337 HECT domain containing 1 [Homo sapiens]
Length = 2610
Score = 30.4 bits (67), Expect = 1.6
Identities = 16/43 (37%), Positives = 19/43 (44%)
Query: 5 SKGIQGWENLAESSHLATTRESSPPESGTGSGSSRGSRLQEPQ 47
S G GW LAT S PE G+ S SR L++ Q
Sbjct: 687 SNGSNGWFRFILDGKLATMYSSGSPEGGSDSSESRSEFLEKLQ 729
>gi|157743280 parahox cluster neighbor [Homo sapiens]
Length = 173
Score = 30.4 bits (67), Expect = 1.6
Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 10/84 (11%)
Query: 23 TRESSPPESGTGS---GSSRGSRLQEPQVSWKLRFQKREPLKNVFFILAERARDPSAKKR 79
T ES +SG G G+ RL E ++ RF F+LA R D +A R
Sbjct: 81 TAESQREQSGAGLRSLGADERLRLAELNAQYRARF-------GFPFVLAARFSDRTAVPR 133
Query: 80 HMAMRNLGTMAYEAPDKVRKYKKI 103
+A R L A E + + KKI
Sbjct: 134 ELARRLLCPSAQELRTALGEVKKI 157
>gi|4506411 Ran GTPase activating protein 1 [Homo sapiens]
Length = 587
Score = 29.6 bits (65), Expect = 2.8
Identities = 24/88 (27%), Positives = 35/88 (39%)
Query: 2 AWGSKGIQGWENLAESSHLATTRESSPPESGTGSGSSRGSRLQEPQVSWKLRFQKREPLK 61
A+G G+QG+E L +SS T +E G G G + + K Q +
Sbjct: 123 AFGPDGVQGFEALLKSSACFTLQELKLNNCGMGIGGGKILAAALTECHRKSSAQGKPLAL 182
Query: 62 NVFFILAERARDPSAKKRHMAMRNLGTM 89
VF R + A A R +GT+
Sbjct: 183 KVFVAGRNRLENDGATALAEAFRVIGTL 210
>gi|13376768 elongation factor RNA polymerase II-like 3 [Homo
sapiens]
Length = 397
Score = 29.6 bits (65), Expect = 2.8
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 221 YLKLKEEYSFQSEEDQRNTKLYQQLSHYHPEILQFFYANK 260
Y K +++Y EE +R L+Q+LSH IL+F N+
Sbjct: 356 YKKFRKQYPSYREEKRRCEYLHQKLSHIKGLILEFEEKNR 395
>gi|23510381 transportin 1 isoform 2 [Homo sapiens]
Length = 890
Score = 29.3 bits (64), Expect = 3.6
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 60 LKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGL--YDPVN 117
LK + L +R D + + + A T+ EA ++ Y +LD LV+ Y N
Sbjct: 478 LKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKN 537
Query: 118 LEVIHESMKTLTVVLG 133
L ++++++ TL +G
Sbjct: 538 LLILYDAIGTLADSVG 553
>gi|133925811 transportin 1 isoform 1 [Homo sapiens]
Length = 898
Score = 29.3 bits (64), Expect = 3.6
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 60 LKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGL--YDPVN 117
LK + L +R D + + + A T+ EA ++ Y +LD LV+ Y N
Sbjct: 486 LKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKN 545
Query: 118 LEVIHESMKTLTVVLG 133
L ++++++ TL +G
Sbjct: 546 LLILYDAIGTLADSVG 561
>gi|48762926 PWP2 periodic tryptophan protein homolog [Homo sapiens]
Length = 919
Score = 28.9 bits (63), Expect = 4.8
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 74 PSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYD 114
P +K + N+ M Y AP K R++ VLD +G YD
Sbjct: 106 PDGRKFVVTKGNIAQM-YHAPGKKREFNAFVLDKTYFGPYD 145
>gi|144226251 chitinase 3-like 1 [Homo sapiens]
Length = 383
Score = 28.5 bits (62), Expect = 6.2
Identities = 31/132 (23%), Positives = 52/132 (39%), Gaps = 7/132 (5%)
Query: 106 DLLVYGLYDPVNLEVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDENDSLRYS 165
D+ +YG+ + L+ + ++KTL V G G S T RT + LR
Sbjct: 73 DVTLYGMLN--TLKNRNPNLKTLLSVGGWNFGSQRFSKIASNTQSRRTFIKSVPPFLRTH 130
Query: 166 AFVLFGQLAAFAGRKWKKFFTSQVKQTRDSLLIHLQDRNPQV-----AKACKTTFQACSP 220
F + GR+ K+ FT+ +K+ + + Q Q+ A K T +
Sbjct: 131 GFDGLDLAWLYPGRRDKQHFTTLIKEMKAEFIKEAQPGKKQLLLSAALSAGKVTIDSSYD 190
Query: 221 YLKLKEEYSFQS 232
K+ + F S
Sbjct: 191 IAKISQHLDFIS 202
>gi|239750109 PREDICTED: similar to unc-93 homolog B1 (C. elegans)
[Homo sapiens]
Length = 529
Score = 28.5 bits (62), Expect = 6.2
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 4/30 (13%)
Query: 9 QGWENLAESSHLATTRESSPPESGTGSGSS 38
QG+EN AE+ +TR P +G GSGSS
Sbjct: 233 QGFENTAETLRALSTR----PSAGAGSGSS 258
>gi|239744415 PREDICTED: similar to unc-93 homolog B1 (C. elegans)
[Homo sapiens]
Length = 503
Score = 28.5 bits (62), Expect = 6.2
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 4/30 (13%)
Query: 9 QGWENLAESSHLATTRESSPPESGTGSGSS 38
QG+EN AE+ +TR P +G GSGSS
Sbjct: 207 QGFENTAETLRALSTR----PSAGAGSGSS 232
>gi|7706575 transmembrane 7 superfamily member 3 [Homo sapiens]
Length = 570
Score = 28.5 bits (62), Expect = 6.2
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 26 SSPPESGTGSGSSRGSRLQEPQVSWKLRFQKREPLKNVFFILAERARDP 74
S+ E+GT SG R ++ +W L +P++N+ +L+ RDP
Sbjct: 86 SNSSETGTASGLVFILRPEQSTCTWYLGTSGIQPVQNMAILLSYSERDP 134
>gi|154350244 hypothetical protein LOC79632 isoform 2 [Homo sapiens]
Length = 971
Score = 28.5 bits (62), Expect = 6.2
Identities = 44/190 (23%), Positives = 74/190 (38%), Gaps = 37/190 (19%)
Query: 76 AKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLE---------------V 120
A K HMA+ + + A +R KK+ +DL D +NLE V
Sbjct: 367 AWKHHMAIEAVHSNA------IRDKKKLQMDLEEQHNKDKLNLEEDKNQLQQELENLKEV 420
Query: 121 IHESMKTLTVVLGKIQG------KGLGSF------FIDITLQTRTLLDDENDSLRYSAFV 168
+ + + T +G +Q +GLGS D + + LD DSL+ +
Sbjct: 421 LEDKLNTANQEIGHLQDMVRKSEQGLGSAEGLIASLQDSQERLQNELDLTKDSLKETKDA 480
Query: 169 LFGQLAAFAGRKWKKFFTSQVKQTRDSLLIHLQDRNPQVAKACKTTFQACSPYLKLKEEY 228
L + + T + + L + + ++ K + Q CS KL+EE
Sbjct: 481 LLNVEGELEQERQQHEETIAAMKEEEKLKVDKMAHDLEI-KWTENLRQECS---KLREEL 536
Query: 229 SFQSEEDQRN 238
Q EED+++
Sbjct: 537 RLQHEEDKKS 546
>gi|154350226 hypothetical protein LOC79632 isoform 1 [Homo sapiens]
Length = 1140
Score = 28.5 bits (62), Expect = 6.2
Identities = 44/190 (23%), Positives = 74/190 (38%), Gaps = 37/190 (19%)
Query: 76 AKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLE---------------V 120
A K HMA+ + + A +R KK+ +DL D +NLE V
Sbjct: 487 AWKHHMAIEAVHSNA------IRDKKKLQMDLEEQHNKDKLNLEEDKNQLQQELENLKEV 540
Query: 121 IHESMKTLTVVLGKIQG------KGLGSF------FIDITLQTRTLLDDENDSLRYSAFV 168
+ + + T +G +Q +GLGS D + + LD DSL+ +
Sbjct: 541 LEDKLNTANQEIGHLQDMVRKSEQGLGSAEGLIASLQDSQERLQNELDLTKDSLKETKDA 600
Query: 169 LFGQLAAFAGRKWKKFFTSQVKQTRDSLLIHLQDRNPQVAKACKTTFQACSPYLKLKEEY 228
L + + T + + L + + ++ K + Q CS KL+EE
Sbjct: 601 LLNVEGELEQERQQHEETIAAMKEEEKLKVDKMAHDLEI-KWTENLRQECS---KLREEL 656
Query: 229 SFQSEEDQRN 238
Q EED+++
Sbjct: 657 RLQHEEDKKS 666
>gi|7669528 neuregulin 2 isoform 2 [Homo sapiens]
Length = 844
Score = 28.1 bits (61), Expect = 8.1
Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 16/127 (12%)
Query: 15 AESSHLATTRESSPPESGTGSGSSRGSRLQEPQVSWKLRFQKREPLKNVFFILAERARDP 74
++SS ++ R SS S + SGSS S +S + P + + R P
Sbjct: 23 SDSSSSSSERSSSSSSSSSESGSSSRSSSNNSSISRPAAPPEPRPQQQ------PQPRSP 76
Query: 75 SAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGL----YDPVNLEVIHESMKTLTV 130
+A++ R A +R+ +L++G+ Y P V ++ K V
Sbjct: 77 AARRAAARSRAA------AAGGMRRDPAPGFSMLLFGVSLACYSPSLKSVQDQAYKAPVV 130
Query: 131 VLGKIQG 137
V GK+QG
Sbjct: 131 VEGKVQG 137
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.133 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,741,777
Number of Sequences: 37866
Number of extensions: 405800
Number of successful extensions: 1478
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1451
Number of HSP's gapped (non-prelim): 39
length of query: 262
length of database: 18,247,518
effective HSP length: 100
effective length of query: 162
effective length of database: 14,460,918
effective search space: 2342668716
effective search space used: 2342668716
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.