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Search of human proteins with 18765733
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|18765733 synaptosomal-associated protein 25 isoform SNAP25A
[Homo sapiens]
(206 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|18765733 synaptosomal-associated protein 25 isoform SNAP25A [... 409 e-115
gi|18765735 synaptosomal-associated protein 25 isoform SNAP25B [... 391 e-109
gi|18765729 synaptosomal-associated protein 23 isoform SNAP23A [... 228 4e-60
gi|18765731 synaptosomal-associated protein 23 isoform SNAP23B [... 185 3e-47
gi|4759154 synaptosomal-associated protein 29 [Homo sapiens] 56 2e-08
gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [H... 47 9e-06
gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo... 47 9e-06
gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo... 47 9e-06
gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo ... 47 9e-06
gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo... 47 1e-05
gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [... 46 3e-05
gi|4507285 syntaxin 10 [Homo sapiens] 46 3e-05
gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo s... 45 4e-05
gi|114155148 tropomyosin 3 isoform 5 [Homo sapiens] 44 1e-04
gi|114155144 tropomyosin 3 isoform 4 [Homo sapiens] 44 1e-04
gi|156104908 myosin heavy chain 6 [Homo sapiens] 43 2e-04
gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo... 42 3e-04
gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta ... 42 5e-04
gi|5032131 syntaxin 6 [Homo sapiens] 40 0.002
gi|114155146 tropomyosin 3 isoform 3 [Homo sapiens] 39 0.004
gi|114155140 tropomyosin 3 isoform 1 [Homo sapiens] 39 0.004
gi|24119203 tropomyosin 3 isoform 2 [Homo sapiens] 39 0.004
gi|58530840 desmoplakin isoform I [Homo sapiens] 37 0.009
gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sap... 37 0.012
gi|4759188 syntaxin 8 [Homo sapiens] 37 0.012
gi|169218106 PREDICTED: hypothetical protein, partial [Homo sapi... 37 0.015
gi|109715852 chromosome 6 open reading frame 204 isoform a [Homo... 37 0.015
gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens] 36 0.020
gi|63252904 tropomyosin 1 alpha chain isoform 6 [Homo sapiens] 36 0.026
gi|63252898 tropomyosin 1 alpha chain isoform 1 [Homo sapiens] 36 0.026
>gi|18765733 synaptosomal-associated protein 25 isoform SNAP25A
[Homo sapiens]
Length = 206
Score = 409 bits (1052), Expect = e-115
Identities = 206/206 (100%), Positives = 206/206 (100%)
Query: 1 MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLDRV 60
MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLDRV
Sbjct: 1 MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLDRV 60
Query: 61 EEGMNHINQDMKEAEKNLKDLGKCCGLFICPCNKLKSSDAYKKAWGNNQDGVVASQPARV 120
EEGMNHINQDMKEAEKNLKDLGKCCGLFICPCNKLKSSDAYKKAWGNNQDGVVASQPARV
Sbjct: 61 EEGMNHINQDMKEAEKNLKDLGKCCGLFICPCNKLKSSDAYKKAWGNNQDGVVASQPARV 120
Query: 121 VDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDR 180
VDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDR
Sbjct: 121 VDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDR 180
Query: 181 IMEKADSNKTRIDEANQRATKMLGSG 206
IMEKADSNKTRIDEANQRATKMLGSG
Sbjct: 181 IMEKADSNKTRIDEANQRATKMLGSG 206
>gi|18765735 synaptosomal-associated protein 25 isoform SNAP25B
[Homo sapiens]
Length = 206
Score = 391 bits (1004), Expect = e-109
Identities = 197/206 (95%), Positives = 202/206 (98%)
Query: 1 MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLDRV 60
MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQL+R+
Sbjct: 1 MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERI 60
Query: 61 EEGMNHINQDMKEAEKNLKDLGKCCGLFICPCNKLKSSDAYKKAWGNNQDGVVASQPARV 120
EEGM+ IN+DMKEAEKNL DLGK CGL +CPCNKLKSSDAYKKAWGNNQDGVVASQPARV
Sbjct: 61 EEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARV 120
Query: 121 VDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDR 180
VDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDR
Sbjct: 121 VDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDR 180
Query: 181 IMEKADSNKTRIDEANQRATKMLGSG 206
IMEKADSNKTRIDEANQRATKMLGSG
Sbjct: 181 IMEKADSNKTRIDEANQRATKMLGSG 206
>gi|18765729 synaptosomal-associated protein 23 isoform SNAP23A
[Homo sapiens]
Length = 211
Score = 228 bits (580), Expect = 4e-60
Identities = 118/205 (57%), Positives = 152/205 (74%), Gaps = 11/205 (5%)
Query: 12 EEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLDRVEEGMNHINQDM 71
EE+Q+RA Q+ DESLESTRR+L L ES+DAGI+T+ MLDEQ EQL+R+EEG++ IN+DM
Sbjct: 7 EEIQQRAHQITDESLESTRRILGLAIESQDAGIKTITMLDEQKEQLNRIEEGLDQINKDM 66
Query: 72 KEAEKNLKDLGKCCGLFICPCNKLK---SSDAYKKAWG----NNQDGVVASQPARVVDER 124
+E EK L +L KCCGL +CPCN+ K S AYK WG N+ VV+ QP V + +
Sbjct: 67 RETEKTLTELNKCCGLCVCPCNRTKNFESGKAYKTTWGDGGENSPCNVVSKQPGPVTNGQ 126
Query: 125 EQM----AISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDR 180
Q A SGG+I+R+TNDARE+EM+ENL QV I+GNL+ MAL++GNEID QN QI R
Sbjct: 127 LQQPTTGAASGGYIKRITNDAREDEMEENLTQVGSILGNLKDMALNIGNEIDAQNPQIKR 186
Query: 181 IMEKADSNKTRIDEANQRATKMLGS 205
I +KAD+N+ RID AN RA K++ S
Sbjct: 187 ITDKADTNRDRIDIANARAKKLIDS 211
>gi|18765731 synaptosomal-associated protein 23 isoform SNAP23B
[Homo sapiens]
Length = 158
Score = 185 bits (469), Expect = 3e-47
Identities = 98/194 (50%), Positives = 125/194 (64%), Gaps = 42/194 (21%)
Query: 12 EEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLDRVEEGMNHINQDM 71
EE+Q+RA Q+ DESLESTRR+L L ES+DAGI+T+ MLDEQ EQL+R+EEG++ IN+DM
Sbjct: 7 EEIQQRAHQITDESLESTRRILGLAIESQDAGIKTITMLDEQKEQLNRIEEGLDQINKDM 66
Query: 72 KEAEKNLKDLGKCCGLFICPCNKLKSSDAYKKAWGNNQDGVVASQPARVVDEREQMAISG 131
+E EK L +L KCCGL +CPCN
Sbjct: 67 RETEKTLTELNKCCGLCVCPCNS------------------------------------- 89
Query: 132 GFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTR 191
+TNDARE+EM+ENL QV I+GNL+ MAL++GNEID QN QI RI +KAD+N+ R
Sbjct: 90 -----ITNDAREDEMEENLTQVGSILGNLKDMALNIGNEIDAQNPQIKRITDKADTNRDR 144
Query: 192 IDEANQRATKMLGS 205
ID AN RA K++ S
Sbjct: 145 IDIANARAKKLIDS 158
>gi|4759154 synaptosomal-associated protein 29 [Homo sapiens]
Length = 258
Score = 55.8 bits (133), Expect = 2e-08
Identities = 55/222 (24%), Positives = 98/222 (44%), Gaps = 41/222 (18%)
Query: 12 EEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLDRVEEGMNHINQDM 71
+E+ RRA+ A ST R L L+ ES+ G+ + L Q L+R E+ ++ ++QD+
Sbjct: 47 QEVLRRAEATA----ASTSRSLALMYESEKVGVASSEELARQRGVLERTEKMVDKMDQDL 102
Query: 72 KEAEKNLKDLGKCCGLFICPCNKLKSSDAYKKAWGNNQDGVVASQPARVVDE-----REQ 126
K ++K++ + G + N KS Q+G + SQP + E +EQ
Sbjct: 103 KISQKHINSIKSVFGGLV---NYFKSKPVETPP---EQNGTLTSQPNNRLKEAISTSKEQ 156
Query: 127 MA-----------------ISGGFIRRVTNDAR---------ENEMDENLEQVSGIIGNL 160
A + G ++ DA ++D NL+++S +G L
Sbjct: 157 EAKYQASHPNLRKLDDTDPVPRGAGSAMSTDAYPKNPHLRAYHQKIDSNLDELSMGLGRL 216
Query: 161 RHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKM 202
+ +AL M EI+ Q+ +DR+ K D I ++ ++
Sbjct: 217 KDIALGMQTEIEEQDDILDRLTTKVDKLDVNIKSTERKVRQL 258
>gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [Homo
sapiens]
Length = 1940
Score = 47.4 bits (111), Expect = 9e-06
Identities = 54/216 (25%), Positives = 97/216 (44%), Gaps = 19/216 (8%)
Query: 2 AEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLDRVE 61
AE ++R LE+ +R A +LA++ L + +QL+ + I T L+ QL +
Sbjct: 1684 AEVEELRATLEQTER-ARKLAEQELLDSNERVQLLHTQNTSLIHTKKKLETDLMQL---Q 1739
Query: 62 EGMNHINQDMKEAEKNLKDLGKCCGLFICPCNKLKSSDAYKKAWGNNQDGVVASQPARVV 121
+ ++D + AE+ K + K + + A+ + N + V R+
Sbjct: 1740 SEVEDASRDARNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNLEQTVKDLQHRL- 1798
Query: 122 DEREQMAISGG--FIRRVTNDAR------ENEMDENLEQVSGIIGNLRHM-ALDMGNEID 172
DE EQ+A+ GG I+++ R E E +N E V G+ R + L +E D
Sbjct: 1799 DEAEQLALKGGKKQIQKLETRIRELEFELEGEQKKNTESVKGLRKYERRVKELTYQSEED 1858
Query: 173 TQN-----RQIDRIMEKADSNKTRIDEANQRATKML 203
+N +D++ K S K + +EA+++A L
Sbjct: 1859 RKNVLRLQDLVDKLQVKVKSYKRQAEEADEQANAHL 1894
>gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo
sapiens]
Length = 1941
Score = 47.4 bits (111), Expect = 9e-06
Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 19/216 (8%)
Query: 2 AEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLDRVE 61
AE ++R LE+ +R + ++A++ L +QL+ + I T L+ + +++
Sbjct: 1689 AEIEELRATLEQTER-SRKIAEQELLDASERVQLLHTQNTSLINTKKKLETD---ISQMQ 1744
Query: 62 EGMNHINQDMKEAEKNLKDLGKCCGLFICPCNKLKSSDAYKKAWGNNQDGVVASQPARVV 121
M I Q+ + AE+ K + K + + A+ + N + V R+
Sbjct: 1745 GEMEDILQEARNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQTVKDLQLRL- 1803
Query: 122 DEREQMAISGGFIRRVTNDAR--------ENEMDENLEQVSGIIGNLRHM-ALDMGNEID 172
DE EQ+A+ GG + +AR E+E N E V G+ + R + L E D
Sbjct: 1804 DEAEQLALKGGKKQIQKLEARVRELEGEVESEQKRNAEAVKGLRKHERRVKELTYQTEED 1863
Query: 173 TQN-----RQIDRIMEKADSNKTRIDEANQRATKML 203
+N +D++ K S K + +EA +++ L
Sbjct: 1864 RKNILRLQDLVDKLQAKVKSYKRQAEEAEEQSNTNL 1899
>gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo
sapiens]
Length = 1941
Score = 47.4 bits (111), Expect = 9e-06
Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 19/216 (8%)
Query: 2 AEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLDRVE 61
AE ++R LE+ +R + ++A++ L +QL+ + I T L+ + +++
Sbjct: 1689 AEIEELRATLEQTER-SRKIAEQELLDASERVQLLHTQNTSLINTKKKLETD---ISQMQ 1744
Query: 62 EGMNHINQDMKEAEKNLKDLGKCCGLFICPCNKLKSSDAYKKAWGNNQDGVVASQPARVV 121
M I Q+ + AE+ K + K + + A+ + N + V R+
Sbjct: 1745 GEMEDILQEARNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQTVKDLQLRL- 1803
Query: 122 DEREQMAISGGFIRRVTNDAR--------ENEMDENLEQVSGIIGNLRHM-ALDMGNEID 172
DE EQ+A+ GG + +AR E+E N E V G+ + R + L E D
Sbjct: 1804 DEAEQLALKGGKKQIQKLEARVRELEGEVESEQKRNAEAVKGLRKHERRVKELTYQTEED 1863
Query: 173 TQN-----RQIDRIMEKADSNKTRIDEANQRATKML 203
+N +D++ K S K + +EA +++ L
Sbjct: 1864 RKNILRLQDLVDKLQAKVKSYKRQAEEAEEQSNTNL 1899
>gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo
sapiens]
Length = 1939
Score = 47.4 bits (111), Expect = 9e-06
Identities = 50/212 (23%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 2 AEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLDRVE 61
AE ++R LE +R E L+++ R+ QL+ + I T L+ + +++
Sbjct: 1687 AEVEELRASLERTERGRKMAEQELLDASERV-QLLHTQNTSLINTKKKLETD---ISQIQ 1742
Query: 62 EGMNHINQDMKEAEKNLKDLGKCCGLFICPCNKLKSSDAYKKAWGNNQDGVVASQPARVV 121
M I Q+ + AE+ K + K + + A+ + N + V R+
Sbjct: 1743 GEMEDIVQEARNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQTVKDLQLRL- 1801
Query: 122 DEREQMAISGGFIRRVTNDAR--------ENEMDENLEQVSGIIGNLRHM-ALDMGNEID 172
DE EQ+A+ GG + +AR E+E N+E V G+ + R + L E D
Sbjct: 1802 DEAEQLALKGGKKQIQKLEARVRELESEVESEQKHNVEAVKGLRKHERRVKELTYQTEED 1861
Query: 173 TQN-----RQIDRIMEKADSNKTRIDEANQRA 199
+N +D++ K + K + +EA +++
Sbjct: 1862 RKNILRLQDLVDKLQTKVKAYKRQAEEAEEQS 1893
Score = 30.4 bits (67), Expect = 1.1
Identities = 18/78 (23%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 7 MRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRT----LVMLDEQGEQLDRVEE 62
+++E++ D+ D+ + R+++ ++ + DA IR+ L + + L+ +E
Sbjct: 1572 VKSEIDRKIAEKDEELDQLKRNHLRVVESMQSTLDAEIRSRNDALRIKKKMEGDLNEMEI 1631
Query: 63 GMNHINQDMKEAEKNLKD 80
+NH N+ EA +NL++
Sbjct: 1632 QLNHANRQAAEALRNLRN 1649
>gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo
sapiens]
Length = 1939
Score = 47.0 bits (110), Expect = 1e-05
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 19/212 (8%)
Query: 2 AEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLDRVE 61
AE ++R LE+ +R + ++A++ L +QL+ + I T L+ + +++
Sbjct: 1687 AEIEELRATLEQTER-SRKIAEQELLDASERVQLLHTQNTSLINTKKKLETD---ISQIQ 1742
Query: 62 EGMNHINQDMKEAEKNLKDLGKCCGLFICPCNKLKSSDAYKKAWGNNQDGVVASQPARVV 121
M I Q+ + AE+ K + K + + A+ + N + V R+
Sbjct: 1743 GEMEDIIQEARNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNLEQTVKDLQHRL- 1801
Query: 122 DEREQMAISGGFIRRVTNDAR--------ENEMDENLEQVSGIIGNLRHM-ALDMGNEID 172
DE EQ+A+ GG + +AR E+E N+E V G+ + R + L E D
Sbjct: 1802 DEAEQLALKGGKKQIQKLEARVRELEGEVESEQKRNVEAVKGLRKHERKVKELTYQTEED 1861
Query: 173 TQN-----RQIDRIMEKADSNKTRIDEANQRA 199
+N +D++ K S K + +EA +++
Sbjct: 1862 RKNILRLQDLVDKLQAKVKSYKRQAEEAEEQS 1893
>gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [Homo
sapiens]
Length = 1937
Score = 45.8 bits (107), Expect = 3e-05
Identities = 51/206 (24%), Positives = 87/206 (42%), Gaps = 20/206 (9%)
Query: 13 EMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLD-RVEEGMNHINQDM 71
E R+ ++A++ L +QL+ + I T L+ QL VEE + Q+
Sbjct: 1696 EQTERSRKIAEQELLDASERVQLLHTQNTSLINTKKKLENDVSQLQSEVEE----VIQES 1751
Query: 72 KEAEKNLKDLGKCCGLFICPCNKLKSSDAYKKAWGNNQDGVVASQPARVVDEREQMAISG 131
+ AE+ K + K + + A+ + N + V R+ DE EQ+A+ G
Sbjct: 1752 RNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNLEQTVKDLQHRL-DEAEQLALKG 1810
Query: 132 GFIRRVTNDAR--------ENEMDENLEQVSGIIGNLRHM-ALDMGNEIDTQN-----RQ 177
G + +AR ENE N E V G+ + R + L E D +N
Sbjct: 1811 GKKQIQKLEARVRELEGEVENEQKRNAEAVKGLRKHERRVKELTYQTEEDRKNVLRLQDL 1870
Query: 178 IDRIMEKADSNKTRIDEANQRATKML 203
+D++ K S K + +EA +++ L
Sbjct: 1871 VDKLQAKVKSYKRQAEEAEEQSNANL 1896
Score = 28.1 bits (61), Expect = 5.5
Identities = 43/196 (21%), Positives = 83/196 (42%), Gaps = 15/196 (7%)
Query: 9 NELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLDRVEEGMNHIN 68
NE+E A++LA ESL + R +++E++ L ++ EQL VE N +
Sbjct: 1626 NEMEIQLNHANRLAAESLRNYRNTQGILKETQLHLDDALRGQEDLKEQLAIVERRANLLQ 1685
Query: 69 QDMKEAEKNLKDLGKCCGLFICPCNKLKSSDAYKKAWGNNQDGVVASQPARVVDEREQMA 128
+++E L+ + I L +S+ + + Q+ + + ++ ++ Q+
Sbjct: 1686 AEIEELWATLEQTER--SRKIAEQELLDASERVQLL--HTQNTSLINTKKKLENDVSQLQ 1741
Query: 129 ISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQ---NRQIDRIMEKA 185
+ V ++R E E+ I + MA ++ E DT R + +
Sbjct: 1742 SE---VEEVIQESRNAE-----EKAKKAITDAAMMAEELKKEQDTSAHLERMKKNLEQTV 1793
Query: 186 DSNKTRIDEANQRATK 201
+ R+DEA Q A K
Sbjct: 1794 KDLQHRLDEAEQLALK 1809
>gi|4507285 syntaxin 10 [Homo sapiens]
Length = 249
Score = 45.8 bits (107), Expect = 3e-05
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 15/136 (11%)
Query: 71 MKEAEKNLKD--LGKCCGLFICPCNK--LKSSDAYKKAWGNNQDGVVASQPARVVDEREQ 126
M+EA + +KD + F+ N+ L A +K+ + D S +R ++E++
Sbjct: 95 MREAVQEMKDHMVSPTAVAFLERNNREILAGKPAAQKSPSDLLDASAVSATSRYIEEQQ- 153
Query: 127 MAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKAD 186
T +E D+ LE VSG I L+HM+ +G E+D Q +D ++ D
Sbjct: 154 ----------ATQQLIMDEQDQQLEMVSGSIQVLKHMSGRVGEELDEQGIMLDAFAQEMD 203
Query: 187 SNKTRIDEANQRATKM 202
++R+D ++ K+
Sbjct: 204 HTQSRMDGVLRKLAKV 219
>gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo
sapiens]
Length = 1935
Score = 45.1 bits (105), Expect = 4e-05
Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 26/218 (11%)
Query: 7 MRNELEEMQ------RRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLD-R 59
++ ELEE++ R+ +LA++ L T +QL+ + I +D QL
Sbjct: 1681 LQAELEELRAVVEQTERSRKLAEQELIETSERVQLLHSQNTSLINQKKKMDADLSQLQTE 1740
Query: 60 VEEGMNHINQDMKEAEKNLKDLGKCCGLFICPCNKLKSSDAYKKAWGNNQDGVVASQPAR 119
VEE + ++A+K + D + K + + A+ + N + + R
Sbjct: 1741 VEEAVQECRNAEEKAKKAITD----AAMMAEELKKEQDTSAHLERMKKNMEQTIKDLQHR 1796
Query: 120 VVDEREQMAISGGFIRRVTNDAR----ENEMD----ENLEQVSGIIGNLRHM-ALDMGNE 170
+ DE EQ+A+ GG + +AR ENE++ N E V G+ + R + L E
Sbjct: 1797 L-DEAEQIALKGGKKQLQKLEARVRELENELEAEQKRNAESVKGMRKSERRIKELTYQTE 1855
Query: 171 IDTQN-----RQIDRIMEKADSNKTRIDEANQRATKML 203
D +N +D++ K + K + +EA ++A L
Sbjct: 1856 EDRKNLLRLQDLVDKLQLKVKAYKRQAEEAEEQANTNL 1893
Score = 27.3 bits (59), Expect = 9.4
Identities = 18/79 (22%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 7 MRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRT----LVMLDEQGEQLDRVEE 62
++ E+E D+ +++ + R++ ++ S DA R+ L + + L+ +E
Sbjct: 1568 IKAEIERKLAEKDEEMEQAKRNHLRVVDSLQTSLDAETRSRNEALRVKKKMEGDLNEMEI 1627
Query: 63 GMNHINQDMKEAEKNLKDL 81
++H N+ EA+K +K L
Sbjct: 1628 QLSHANRMAAEAQKQVKSL 1646
>gi|114155148 tropomyosin 3 isoform 5 [Homo sapiens]
Length = 247
Score = 43.5 bits (101), Expect = 1e-04
Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 28/211 (13%)
Query: 2 AEDADMRNEL----EEMQRRADQLADESLESTRRMLQLVEESKDAG----IRTLVMLDEQ 53
A+DA+ R E E +RRA + A+ + S R +QLVEE D L L+E
Sbjct: 21 ADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEA 80
Query: 54 GEQLDRVEEGMNHI-NQDMKEAEK-NLKDLGKCCGLFICPCNKLKSSDAYKKAWGNNQDG 111
+ D E GM I N+ +K+ EK L+++ I K + +K
Sbjct: 81 EKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKL------- 133
Query: 112 VVASQPARVVDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEI 171
V+ +ER ++A +++ +E++E L+ V+ + +L A +
Sbjct: 134 VIIEGDLERTEERAELA-----------ESKCSELEEELKNVTNNLKSLEAQAEKYSQKE 182
Query: 172 DTQNRQIDRIMEKADSNKTRIDEANQRATKM 202
D +I + +K +TR + A + K+
Sbjct: 183 DKYEEEIKILTDKLKEAETRAEFAERSVAKL 213
>gi|114155144 tropomyosin 3 isoform 4 [Homo sapiens]
Length = 248
Score = 43.5 bits (101), Expect = 1e-04
Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 28/211 (13%)
Query: 2 AEDADMRNEL----EEMQRRADQLADESLESTRRMLQLVEESKDAG----IRTLVMLDEQ 53
A+DA+ R E E +RRA + A+ + S R +QLVEE D L L+E
Sbjct: 21 ADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEA 80
Query: 54 GEQLDRVEEGMNHI-NQDMKEAEK-NLKDLGKCCGLFICPCNKLKSSDAYKKAWGNNQDG 111
+ D E GM I N+ +K+ EK L+++ I K + +K
Sbjct: 81 EKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKL------- 133
Query: 112 VVASQPARVVDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEI 171
V+ +ER ++A +++ +E++E L+ V+ + +L A +
Sbjct: 134 VIIEGDLERTEERAELA-----------ESKCSELEEELKNVTNNLKSLEAQAEKYSQKE 182
Query: 172 DTQNRQIDRIMEKADSNKTRIDEANQRATKM 202
D +I + +K +TR + A + K+
Sbjct: 183 DKYEEEIKILTDKLKEAETRAEFAERSVAKL 213
>gi|156104908 myosin heavy chain 6 [Homo sapiens]
Length = 1939
Score = 42.7 bits (99), Expect = 2e-04
Identities = 51/218 (23%), Positives = 93/218 (42%), Gaps = 26/218 (11%)
Query: 7 MRNELEEMQ------RRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLD-R 59
++ ELEE++ R+ +LA++ L T +QL+ + I ++ QL
Sbjct: 1683 LQAELEELRAVVEQTERSRKLAEQELIETSERVQLLHSQNTSLINQKKKMESDLTQLQSE 1742
Query: 60 VEEGMNHINQDMKEAEKNLKDLGKCCGLFICPCNKLKSSDAYKKAWGNNQDGVVASQPAR 119
VEE + ++A+K + D + K + + A+ + N + + R
Sbjct: 1743 VEEAVQECRNAEEKAKKAITD----AAMMAEELKKEQDTSAHLERMKKNMEQTIKDLQHR 1798
Query: 120 VVDEREQMAISGGFIRRVTNDAR--------ENEMDENLEQVSGIIGNLRHM-ALDMGNE 170
+ DE EQ+A+ GG + +AR E E N E V G+ + R + L E
Sbjct: 1799 L-DEAEQIALKGGKKQLQKLEARVRELEGELEAEQKRNAESVKGMRKSERRIKELTYQTE 1857
Query: 171 IDTQN-----RQIDRIMEKADSNKTRIDEANQRATKML 203
D +N +D++ K + K + +EA ++A L
Sbjct: 1858 EDKKNLLRLQDLVDKLQLKVKAYKRQAEEAEEQANTNL 1895
Score = 28.5 bits (62), Expect = 4.2
Identities = 38/193 (19%), Positives = 73/193 (37%), Gaps = 27/193 (13%)
Query: 5 ADMRNELEEMQRRADQLA-------------DESLESTRRMLQ---LVEESKDAGIRT-- 46
+D+ ELEE+ R ++ + + RR L+ L E+ A +R
Sbjct: 1139 SDLSRELEEISERLEEAGGATSVQIEMNKKREAEFQKMRRDLEEATLQHEATAAALRKKH 1198
Query: 47 LVMLDEQGEQLDRVEEGMNHINQDMKEAEKNLKDLGKCCGLFICPCNKLKSSDAYKKAWG 106
+ E GEQ+D ++ + ++ E + L D+ I K+ +K
Sbjct: 1199 ADSVAELGEQIDNLQRVKQKLEKEKSEFKLELDDVTSNMEQII------KAKANLEKVSR 1252
Query: 107 NNQDGVVASQPARVVDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALD 166
+D + RV E Q +++ +R E+ LE+ +I L L
Sbjct: 1253 TLED---QANEYRVKLEEAQRSLNDFTTQRAKLQTENGELARQLEEKEALISQLTRGKLS 1309
Query: 167 MGNEIDTQNRQID 179
+++ RQ++
Sbjct: 1310 YTQQMEDLKRQLE 1322
Score = 28.5 bits (62), Expect = 4.2
Identities = 18/79 (22%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 7 MRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRT----LVMLDEQGEQLDRVEE 62
++ E+E D+ +++ + +R++ ++ S DA R+ L + + L+ +E
Sbjct: 1570 IKAEIERKLAEKDEEMEQAKRNHQRVVDSLQTSLDAETRSRNEVLRVKKKMEGDLNEMEI 1629
Query: 63 GMNHINQDMKEAEKNLKDL 81
++H N+ EA+K +K L
Sbjct: 1630 QLSHANRMAAEAQKQVKSL 1648
>gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo
sapiens]
Length = 1938
Score = 42.4 bits (98), Expect = 3e-04
Identities = 51/214 (23%), Positives = 89/214 (41%), Gaps = 24/214 (11%)
Query: 10 ELEEMQ------RRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLDRVEEG 63
ELEEM+ R +L+++ L +QL+ + I T L+ Q E
Sbjct: 1688 ELEEMKVALEQTERTRRLSEQELLDASDRVQLLHSQNTSLINTKKKLEADIAQCQAEVE- 1746
Query: 64 MNHINQDMKEAEKNLKDLGKCCGLFICPCNKLKSSDAYKKAWGNNQDGVVASQPARVVDE 123
N I Q+ + AE+ K + K + + A+ + N + V R+ DE
Sbjct: 1747 -NSI-QESRNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNLEQTVKDLQHRL-DE 1803
Query: 124 REQMAISGG--FIRRVTNDARENEMDENLEQVSGI------------IGNLRHMALDMGN 169
EQ+A+ GG I+++ N RE E + ++EQ G + + + A +
Sbjct: 1804 AEQLALKGGKKQIQKLENRVRELENELDVEQKRGAEALKGAHKYERKVKEMTYQAEEDHK 1863
Query: 170 EIDTQNRQIDRIMEKADSNKTRIDEANQRATKML 203
I +D++ K S K + +EA ++A L
Sbjct: 1864 NILRLQDLVDKLQAKVKSYKRQAEEAEEQANTQL 1897
>gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta [Homo
sapiens]
Length = 1983
Score = 41.6 bits (96), Expect = 5e-04
Identities = 52/217 (23%), Positives = 90/217 (41%), Gaps = 21/217 (9%)
Query: 2 AEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLD-RV 60
AE ++R LE+ +R E LE+T R L L+ + L+ QL V
Sbjct: 1732 AELEELRAALEQGERSRRLAEQELLEATER-LNLLHSQNTGLLNQKKKLEADLAQLSGEV 1790
Query: 61 EEGMNHINQDMKEAEKNLKDLGKCCGLFICPCNKLKSSDAYKKAWGNNQDGVVASQPARV 120
EE Q+ +EAE+ K + K + + A+ + + V AR+
Sbjct: 1791 EEAA----QERREAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKTLEQTVRELQARL 1846
Query: 121 VDEREQMAISGGF--IRRVTNDARENEMDENLEQ------VSGI------IGNLRHMALD 166
+E EQ A+ GG ++++ RE E + + EQ + G+ + L + A +
Sbjct: 1847 -EEAEQAALRGGKKQVQKLEAKVRELEAELDAEQKKHAEALKGVRKHERRVKELAYQAEE 1905
Query: 167 MGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKML 203
+ +D++ K S K + +EA Q+A L
Sbjct: 1906 DRKNLARMQDLVDKLQSKVKSYKRQFEEAEQQANTNL 1942
Score = 31.6 bits (70), Expect = 0.50
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 5 ADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLDRVEEG 63
A M+ +++E+Q RA++L +E LE+ R VE+ + R L L E+ E+ G
Sbjct: 1151 AQMQKKIKELQARAEEL-EEELEAERAARARVEKQRAEAARELEELSERLEEAGGASAG 1208
Score = 30.4 bits (67), Expect = 1.1
Identities = 49/228 (21%), Positives = 93/228 (40%), Gaps = 33/228 (14%)
Query: 2 AEDADMRNELEEMQRRAD---QLADESLEST--------RRMLQLVEESKDAGIR----- 45
A+ ELEE +++ Q A+E +E+ + L+L ES+D +
Sbjct: 1426 ADAIQRTEELEEAKKKLALRLQEAEEGVEAANAKCSSLEKAKLRLQTESEDVTLELERAT 1485
Query: 46 -TLVMLDEQGEQLDRVEEGMNHINQDMKE----AEKNLKDLGKCCGLFICPCNKLKSSDA 100
LD++ L+R E ++M+ A++ + LG LF ++ +A
Sbjct: 1486 SAAAALDKKQRHLERALEERRRQEEEMQRELEAAQRESRGLGT--ELFRLRHGHEEALEA 1543
Query: 101 YKKAWGNNQDGVVASQPARVVDEREQMAISGGFIRRV--TNDARENEMDE---NLEQVSG 155
+ N++ + D +Q+++SG I+ + T A E E E LE+ G
Sbjct: 1544 LETLKRENKN-----LQEEISDLTDQVSLSGKSIQELEKTKKALEGEKSEIQAALEEAEG 1598
Query: 156 IIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKML 203
+ L + E+ ++DR + + D + +QRA + L
Sbjct: 1599 ALELEETKTLRIQLELSQVKAEVDRKLAEKDEECANLRRNHQRAVESL 1646
>gi|5032131 syntaxin 6 [Homo sapiens]
Length = 255
Score = 39.7 bits (91), Expect = 0.002
Identities = 18/58 (31%), Positives = 35/58 (60%)
Query: 145 EMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKM 202
+ DE LE VSG IG L++M+ +G E++ Q ++ + +S ++R+D ++ K+
Sbjct: 168 QQDEQLELVSGSIGVLKNMSQRIGGELEEQAVMLEDFSHELESTQSRLDNVMKKLAKV 225
>gi|114155146 tropomyosin 3 isoform 3 [Homo sapiens]
Length = 247
Score = 38.5 bits (88), Expect = 0.004
Identities = 51/211 (24%), Positives = 85/211 (40%), Gaps = 28/211 (13%)
Query: 2 AEDADMRNEL----EEMQRRADQLADESLESTRRMLQLVEESKDAG----IRTLVMLDEQ 53
A+DA+ R E E +RRA + A+ + S R +QLVEE D L L+E
Sbjct: 21 ADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEA 80
Query: 54 GEQLDRVEEGMNHI-NQDMKEAEK-NLKDLGKCCGLFICPCNKLKSSDAYKKAWGNNQDG 111
+ D E GM I N+ +K+ EK L+++ I K + +K
Sbjct: 81 EKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKL------- 133
Query: 112 VVASQPARVVDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEI 171
V+ +ER ++A ++R EMDE + + + L +
Sbjct: 134 VIIEGDLERTEERAELA-----------ESRCREMDEQIRLMDQNLKCLSAAEEKYSQKE 182
Query: 172 DTQNRQIDRIMEKADSNKTRIDEANQRATKM 202
D +I + +K +TR + A + K+
Sbjct: 183 DKYEEEIKILTDKLKEAETRAEFAERSVAKL 213
>gi|114155140 tropomyosin 3 isoform 1 [Homo sapiens]
Length = 285
Score = 38.5 bits (88), Expect = 0.004
Identities = 46/215 (21%), Positives = 95/215 (44%), Gaps = 23/215 (10%)
Query: 7 MRNELEEMQRRADQLADE------SLESTRRMLQLVE------ESKDAGIRTLVMLDEQG 54
+ +EL MQ++ DE +L+ + L+L E E++ A + + L E
Sbjct: 40 LEDELAAMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVE-- 97
Query: 55 EQLDRVEEGMNHINQDMKEAEKNLKDLGKCCGLFICPCNKLKSSDAYKKAWGNNQDGV-V 113
E+LDR +E + Q ++EAEK + + G+ + LK + + ++ +
Sbjct: 98 EELDRAQERLATALQKLEEAEKAADESER--GMKVIENRALKDEEKMELQEIQLKEAKHI 155
Query: 114 ASQPARVVDE-REQMAISGGFIRRVTN-----DARENEMDENLEQVSGIIGNLRHMALDM 167
A + R +E ++ I G + R +++ +E++E L+ V+ + +L A
Sbjct: 156 AEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKY 215
Query: 168 GNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKM 202
+ D +I + +K +TR + A + K+
Sbjct: 216 SQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKL 250
>gi|24119203 tropomyosin 3 isoform 2 [Homo sapiens]
Length = 248
Score = 38.5 bits (88), Expect = 0.004
Identities = 51/211 (24%), Positives = 85/211 (40%), Gaps = 28/211 (13%)
Query: 2 AEDADMRNEL----EEMQRRADQLADESLESTRRMLQLVEESKDAG----IRTLVMLDEQ 53
A+DA+ R E E +RRA + A+ + S R +QLVEE D L L+E
Sbjct: 21 ADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEA 80
Query: 54 GEQLDRVEEGMNHI-NQDMKEAEK-NLKDLGKCCGLFICPCNKLKSSDAYKKAWGNNQDG 111
+ D E GM I N+ +K+ EK L+++ I K + +K
Sbjct: 81 EKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKL------- 133
Query: 112 VVASQPARVVDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEI 171
V+ +ER ++A ++R EMDE + + + L +
Sbjct: 134 VIIEGDLERTEERAELA-----------ESRCREMDEQIRLMDQNLKCLSAAEEKYSQKE 182
Query: 172 DTQNRQIDRIMEKADSNKTRIDEANQRATKM 202
D +I + +K +TR + A + K+
Sbjct: 183 DKYEEEIKILTDKLKEAETRAEFAERSVAKL 213
>gi|58530840 desmoplakin isoform I [Homo sapiens]
Length = 2871
Score = 37.4 bits (85), Expect = 0.009
Identities = 37/183 (20%), Positives = 80/183 (43%), Gaps = 14/183 (7%)
Query: 3 EDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLDRVEE 62
E ++R E+E+ Q++A + ++ ES + Q+V+E + ++ + +L++ +L R+E+
Sbjct: 1776 ERENLRQEIEKFQKQALEASNRIQESKNQCTQVVQERESLLVK-IKVLEQDKARLQRLED 1834
Query: 63 GMNHINQDMKEAEKNLKDLGKCCGLFICPCNKLKSSDAYKKAWGNNQDGVVASQPARVVD 122
+N + EAE +K +C I + +K + ++ + + R
Sbjct: 1835 ELNRAKSTL-EAETRVKQRLECEKQQI-----QNDLNQWKTQYSRKEEAIRKIESEREKS 1888
Query: 123 EREQMAISGGFIRRVTNDAR-ENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRI 181
ERE+ ++ R R E LE + R + E R+ID++
Sbjct: 1889 EREKNSLRSEIERLQAEIKRIEERCRRKLED------STRETQSQLETERSRYQREIDKL 1942
Query: 182 MEK 184
++
Sbjct: 1943 RQR 1945
>gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo
sapiens]
Length = 570
Score = 37.0 bits (84), Expect = 0.012
Identities = 35/203 (17%), Positives = 81/203 (39%), Gaps = 18/203 (8%)
Query: 4 DADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLDRVEEG 63
+ + R E E R ++ E E R ++++E ++ + EQ E++ EE
Sbjct: 374 EQEKRQEQEAKMWRQEEKIREQEEKIREQEEMMQEQEEKMGEQEEKMWEQEEEMQEQEEK 433
Query: 64 MNHINQDMKEAEKNLKDLGKCCGLFICPCNKLKSSDAYKKAWGNN---QDGVVASQPARV 120
M + ++E EK +++ + K++ + + Q+G + Q A++
Sbjct: 434 MRRQEEKIREQEKKIREQEE----------KIREQEEMMQEQEEKMGEQEGKMCEQEAKM 483
Query: 121 VDEREQMAISGGFIRRVTNDARE-----NEMDENLEQVSGIIGNLRHMALDMGNEIDTQN 175
++ E+M IR RE E +E +++ + + ++ Q
Sbjct: 484 QEQEEKMRRQEEKIREQEKKIREQEEKIREQEEMMQEQEEKMWEQEEKMCEQEEKMQEQE 543
Query: 176 RQIDRIMEKADSNKTRIDEANQR 198
++ R EK + R+ + ++
Sbjct: 544 EKMRRQEEKMREQEVRLRQQEEK 566
>gi|4759188 syntaxin 8 [Homo sapiens]
Length = 236
Score = 37.0 bits (84), Expect = 0.012
Identities = 43/199 (21%), Positives = 84/199 (42%), Gaps = 16/199 (8%)
Query: 1 MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLDRV 60
+AE RN+ E +A +L + R +LQ ++E K A ++ L++ Q+ ++
Sbjct: 20 IAEKIQQRNQYERKGEKAPKLT----VTIRALLQNLKE-KIALLKDLLLRAVSTHQITQL 74
Query: 61 E-EGMNHINQDMKEAEKNLKDLGKCCGLFICPCNKLKSSDAYKKAWGNNQDGVVASQPAR 119
E + ++ D+ E+ L K N+ D + + + + A P
Sbjct: 75 EGDRRQNLLDDLVTRERLLLASFK---------NEGAEPDLIRSSLMSEEAKRGAPNPWL 125
Query: 120 VVDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQID 179
+ E + IR+ + E D L+ +S II + M ++GNE+D QN ID
Sbjct: 126 FEEPEETRGLGFDEIRQQQQKIIQ-EQDAGLDALSSIISRQKQMGQEIGNELDEQNEIID 184
Query: 180 RIMEKADSNKTRIDEANQR 198
+ ++ ++ +R
Sbjct: 185 DLANLVENTDEKLRNETRR 203
>gi|169218106 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 436
Score = 36.6 bits (83), Expect = 0.015
Identities = 34/209 (16%), Positives = 86/209 (41%), Gaps = 32/209 (15%)
Query: 3 EDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLDRVEE 62
++ M + E+MQ++ +Q+ ++ + ++ Q+ E+ + + +Q EQ+ + EE
Sbjct: 204 QEEQMGEQEEQMQKQEEQMGEQEEQMRKQEEQMGEQEEQ--------VQKQEEQVQKQEE 255
Query: 63 GMNHINQDMKEAEKNLKDLGKCCGLFICPCNKLKSSDAYKKAWGNNQDGVVASQPARVVD 122
M + M+E E+ +++ + K+ Q+ Q ++ +
Sbjct: 256 QMRKQEEQMREQEEQMRE---------------QEEQMLKQKEQTEQEEQTGEQEEQMRE 300
Query: 123 EREQMAISGGFIRRVTNDARENE---------MDENLEQVSGIIGNLRHMALDMGNEIDT 173
+ EQM +R RE E M E EQ+ + MG + +
Sbjct: 301 QEEQMREQEEQMREQEEQMREQEEQMGKQEEQMWEQKEQMWEQKEQMWKQEEQMGEQEEQ 360
Query: 174 QNRQIDRIMEKADSNKTRIDEANQRATKM 202
+Q +++ ++ + + + ++ ++ +M
Sbjct: 361 MQKQEEQVRKQEEQMRKQEEQMRKQEEQM 389
>gi|109715852 chromosome 6 open reading frame 204 isoform a [Homo
sapiens]
Length = 805
Score = 36.6 bits (83), Expect = 0.015
Identities = 39/198 (19%), Positives = 88/198 (44%), Gaps = 17/198 (8%)
Query: 11 LEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLDRVEEGMNHINQD 70
+ ++++ + ++++ E RR+ L E A + TL + Q QL +EE ++ +
Sbjct: 487 ISSLKKKCQKESEQNKEKQRRIETL--EKYLADLPTLDDVQSQSLQLQILEEKNKNLQEA 544
Query: 71 MKEAEKNLKDLGKCC----GLFICPCNKLKS-----SDAYKKAWGNNQDGV--VASQPAR 119
+ + EK L+++ K C IC K K +K +DG+ +
Sbjct: 545 LIDTEKKLEEIKKQCQDKETQLICQKKKEKELVTTVQSLQQKVERCLEDGIRLPMLDAKQ 604
Query: 120 VVDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMAL---DMGNEIDTQNR 176
+ +E + + ++ D++++E+D + ++ + G L L M E++ + R
Sbjct: 605 LQNENDNLRQQNETASKII-DSQQDEIDRMILEIQSMQGKLSKEKLTTQKMMEELEKKER 663
Query: 177 QIDRIMEKADSNKTRIDE 194
+ R+ + N+ + DE
Sbjct: 664 NVQRLTKALLENQRQTDE 681
>gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens]
Length = 1979
Score = 36.2 bits (82), Expect = 0.020
Identities = 35/143 (24%), Positives = 68/143 (47%), Gaps = 13/143 (9%)
Query: 9 NELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLDRVEEGMNHIN 68
+++ EMQ+ L E +EST++M QL ++ KD + L + + L R +E +N
Sbjct: 285 SKIYEMQKTIQVLQIEKVESTKKMEQLEDKIKDIN-KKLSSAENDRDILRREQEQLNVEK 343
Query: 69 QDMKEAEKNLKDLGKCCGLFICPCNKLKSSDAYKKAWGNNQDGVVASQPARVVDEREQMA 128
+ + E +NLK C+KL+ S + ++ ++A + R Q A
Sbjct: 344 RQIMEECENLK----------LECSKLQPSAVKQSDTMTEKERILAQSASVEEVFRLQQA 393
Query: 129 ISG--GFIRRVTNDARENEMDEN 149
+S I R+++ ++N + E+
Sbjct: 394 LSDAENEIMRLSSLNQDNSLAED 416
>gi|63252904 tropomyosin 1 alpha chain isoform 6 [Homo sapiens]
Length = 245
Score = 35.8 bits (81), Expect = 0.026
Identities = 42/202 (20%), Positives = 84/202 (41%), Gaps = 25/202 (12%)
Query: 7 MRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVM----LDEQGEQLDRVEE 62
++ EL+ +R+ + A+ + S R +QLVEE D L L+E + D E
Sbjct: 31 LQRELDH-ERKLRETAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESER 89
Query: 63 GMNHINQDMKEAEKNLKDLGKCCGLFICPCNKLK--SSDAYKKAWGNNQDGVVASQPARV 120
GM I ++ E+ ++ + + K + DA +K + V+
Sbjct: 90 GMKVIESRAQKDEEKME-------IQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLER 142
Query: 121 VDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDR 180
+ER +++ + + E++E L+ V+ + +L A + D +I
Sbjct: 143 AEERAELS-----------EGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDRYEEEIKV 191
Query: 181 IMEKADSNKTRIDEANQRATKM 202
+ +K +TR + A + TK+
Sbjct: 192 LSDKLKEAETRAEFAERSVTKL 213
>gi|63252898 tropomyosin 1 alpha chain isoform 1 [Homo sapiens]
Length = 284
Score = 35.8 bits (81), Expect = 0.026
Identities = 43/203 (21%), Positives = 84/203 (41%), Gaps = 25/203 (12%)
Query: 6 DMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVM----LDEQGEQLDRVE 61
D + +LE +++A A+ + S R +QLVEE D L L+E + D E
Sbjct: 66 DAQEKLELAEKKATD-AEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESE 124
Query: 62 EGMNHINQDMKEAEKNLKDLGKCCGLFICPCNKLK--SSDAYKKAWGNNQDGVVASQPAR 119
GM I ++ E+ ++ + + K + DA +K + V+
Sbjct: 125 RGMKVIESRAQKDEEKME-------IQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLE 177
Query: 120 VVDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQID 179
+ER +++ + + E++E L+ V+ + +L A + D +I
Sbjct: 178 RAEERAELS-----------EGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDRYEEEIK 226
Query: 180 RIMEKADSNKTRIDEANQRATKM 202
+ +K +TR + A + TK+
Sbjct: 227 VLSDKLKEAETRAEFAERSVTKL 249
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.129 0.354
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,479,099
Number of Sequences: 37866
Number of extensions: 261985
Number of successful extensions: 1381
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 124
Number of HSP's that attempted gapping in prelim test: 1146
Number of HSP's gapped (non-prelim): 324
length of query: 206
length of database: 18,247,518
effective HSP length: 97
effective length of query: 109
effective length of database: 14,574,516
effective search space: 1588622244
effective search space used: 1588622244
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.