Guide to the Human Genome
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Name: LOC644794 Sequence: fasta or formatted (205aa) NCBI GI: 89026075
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt mRNA {205aa} PREDICTED: hypothetical protein
alt mRNA {205aa} PREDICTED: hypothetical protein
alt mRNA {205aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.1         29           3
 C cysteine            4.9         10           1
 D aspartate           1.5          3           1
 E glutamate           2.0          4           1
 F phenylalanine       4.9         10           1
 G glycine             7.3         15           2
 H histidine           2.9          6           1
 I isoleucine          1.5          3           1
 K lysine              0.5          1           1
 L leucine            11.2         23           2
 M methionine          1.0          2           1
 N asparagine          1.0          2           1
 P proline            17.6         36           2
 Q glutamine           5.4         11           1
 R arginine            5.4         11           1
 S serine             11.2         23           2
 T threonine           1.0          2           1
 V valine              5.4         11           1
 W tryptophan          1.5          3           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC644794             1.000   PREDICTED: hypothetical protein 
LOC644794             1.000   PREDICTED: hypothetical protein 
LOC644794             1.000   PREDICTED: hypothetical protein 
LOC100131871          0.135   PREDICTED: similar to hCG1779533 
LOC100131871          0.135   PREDICTED: similar to hCG1779533 
LOC100131871          0.135   PREDICTED: similar to hCG1779533 
LOC100293878          0.132   PREDICTED: similar to hCG1779533 
LOC100294359          0.118   PREDICTED: hypothetical protein 
LOC100133331          0.118   PREDICTED: hypothetical protein 
LOC728417             0.113   PREDICTED: hypothetical protein 
LOC728417             0.113   PREDICTED: hypothetical protein 
LOC728417             0.113   PREDICTED: hypothetical protein isoform 2 
LOC728417             0.113   PREDICTED: hypothetical protein isoform 1 
LOC729737             0.110   PREDICTED: hypothetical protein 
LOC100128326          0.098   PREDICTED: hypothetical protein 
LOC100133161          0.096   PREDICTED: hypothetical protein 
LOC100128326          0.096   PREDICTED: hypothetical protein 
LOC100128326          0.096   PREDICTED: hypothetical protein 
LOC100132062          0.096   PREDICTED: hypothetical protein 
LOC100129904          0.096   PREDICTED: hypothetical protein 
LOC100129904          0.096   PREDICTED: hypothetical protein 
LOC100129904          0.096   PREDICTED: hypothetical protein 
LOC100129904          0.096   PREDICTED: hypothetical protein 
LOC731275             0.093   PREDICTED: hypothetical protein 
LOC100132287          0.091   PREDICTED: hypothetical protein 
LOC100132062          0.091   PREDICTED: hypothetical protein 
LOC100134105          0.086   PREDICTED: similar to hCG1793472 
LOC100288155          0.081   PREDICTED: hypothetical protein XP_002342801, parti...
LOC100288155          0.081   PREDICTED: hypothetical protein, partial 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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