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Search of human proteins with 113410972
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|113410972 PREDICTED: hypothetical protein [Homo sapiens]
(182 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|113410972 PREDICTED: hypothetical protein [Homo sapiens] 364 e-101
gi|239747139 PREDICTED: hypothetical protein XP_002343922 [Homo ... 355 1e-98
gi|6631100 natural killer-tumor recognition sequence [Homo sapiens] 45 3e-05
gi|108860697 zinc finger protein 592 [Homo sapiens] 33 0.14
gi|229892308 shugoshin-like 2 isoform 2 [Homo sapiens] 32 0.30
gi|229892306 shugoshin-like 2 isoform 1 [Homo sapiens] 32 0.30
gi|229892197 shugoshin-like 2 isoform 3 [Homo sapiens] 32 0.30
gi|225579067 solute carrier family 12, member 4 isoform e [Homo ... 32 0.30
gi|225579065 solute carrier family 12, member 4 isoform d [Homo ... 32 0.30
gi|225579063 solute carrier family 12, member 4 isoform c [Homo ... 32 0.30
gi|4827006 solute carrier family 12, member 4 isoform a [Homo sa... 32 0.30
gi|52426743 cisplatin resistance-associated overexpressed protei... 32 0.30
gi|19923485 cisplatin resistance-associated overexpressed protei... 32 0.30
gi|109255228 centrosomal protein 170kDa isoform alpha [Homo sapi... 32 0.30
gi|155030185 hypothetical protein LOC55726 [Homo sapiens] 30 0.88
gi|56676397 ankyrin repeat domain 11 [Homo sapiens] 30 1.1
gi|17978469 cyclin T2 isoform b [Homo sapiens] 30 1.1
gi|225579061 solute carrier family 12, member 4 isoform b [Homo ... 30 1.5
gi|87196343 PDZ domain containing 2 [Homo sapiens] 30 1.5
gi|40805104 topoisomerase I binding, arginine/serine-rich [Homo ... 29 2.0
gi|9558733 transformer-2 alpha [Homo sapiens] 29 2.6
gi|8922633 high-mobility group 20A [Homo sapiens] 29 2.6
gi|151301228 formin binding protein 3 [Homo sapiens] 29 2.6
gi|7524365 paired box 8 isoform PAX8D [Homo sapiens] 28 3.3
gi|239749012 PREDICTED: hypothetical protein XP_002346880 [Homo ... 28 3.3
gi|7669542 paired box 8 isoform PAX8E [Homo sapiens] 28 3.3
gi|7524363 paired box 8 isoform PAX8C [Homo sapiens] 28 3.3
gi|7524361 paired box 8 isoform PAX8B [Homo sapiens] 28 3.3
gi|5803117 paired box 8 isoform PAX8A [Homo sapiens] 28 3.3
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)... 28 3.3
>gi|113410972 PREDICTED: hypothetical protein [Homo sapiens]
Length = 182
Score = 364 bits (935), Expect = e-101
Identities = 182/182 (100%), Positives = 182/182 (100%)
Query: 1 MNVLESYVRDKHSDHGRSVLESYVRNKHSDHSRSVLESYMSYKHSDPHSSVLESYVREKH 60
MNVLESYVRDKHSDHGRSVLESYVRNKHSDHSRSVLESYMSYKHSDPHSSVLESYVREKH
Sbjct: 1 MNVLESYVRDKHSDHGRSVLESYVRNKHSDHSRSVLESYMSYKHSDPHSSVLESYVREKH 60
Query: 61 SEHSRSALESYVRDKHSEPRNIVLETYVRDRHLDPRSSVLESHVRVKHSDPRSSVLEFYV 120
SEHSRSALESYVRDKHSEPRNIVLETYVRDRHLDPRSSVLESHVRVKHSDPRSSVLEFYV
Sbjct: 61 SEHSRSALESYVRDKHSEPRNIVLETYVRDRHLDPRSSVLESHVRVKHSDPRSSVLEFYV 120
Query: 121 SDKHSDSSSSVLYSYEKDKHSESRSSVLKSYVKGKHTDPSINVLESYVRDIHSDPRSSVL 180
SDKHSDSSSSVLYSYEKDKHSESRSSVLKSYVKGKHTDPSINVLESYVRDIHSDPRSSVL
Sbjct: 121 SDKHSDSSSSVLYSYEKDKHSESRSSVLKSYVKGKHTDPSINVLESYVRDIHSDPRSSVL 180
Query: 181 ES 182
ES
Sbjct: 181 ES 182
>gi|239747139 PREDICTED: hypothetical protein XP_002343922 [Homo
sapiens]
Length = 182
Score = 355 bits (911), Expect = 1e-98
Identities = 176/182 (96%), Positives = 179/182 (98%)
Query: 1 MNVLESYVRDKHSDHGRSVLESYVRNKHSDHSRSVLESYMSYKHSDPHSSVLESYVREKH 60
MNVLESYVRDKHSDHGRSVLESYVRNKHS+HSRSVLESY YKHSDPHSSVLESYVREKH
Sbjct: 1 MNVLESYVRDKHSDHGRSVLESYVRNKHSEHSRSVLESYRRYKHSDPHSSVLESYVREKH 60
Query: 61 SEHSRSALESYVRDKHSEPRNIVLETYVRDRHLDPRSSVLESHVRVKHSDPRSSVLEFYV 120
SEHSRSALESYVRDKHSEPRNIVLETYVRDRHLDPRSSVLESH+RVKHSDPRSSVLEFYV
Sbjct: 61 SEHSRSALESYVRDKHSEPRNIVLETYVRDRHLDPRSSVLESHLRVKHSDPRSSVLEFYV 120
Query: 121 SDKHSDSSSSVLYSYEKDKHSESRSSVLKSYVKGKHTDPSINVLESYVRDIHSDPRSSVL 180
SDKHSDSSSSVLYSYEKDKHSESRSSVLKSYVKGKHTDPSIN+LESYVRDIHSDP SSVL
Sbjct: 121 SDKHSDSSSSVLYSYEKDKHSESRSSVLKSYVKGKHTDPSINILESYVRDIHSDPHSSVL 180
Query: 181 ES 182
ES
Sbjct: 181 ES 182
>gi|6631100 natural killer-tumor recognition sequence [Homo sapiens]
Length = 1462
Score = 45.4 bits (106), Expect = 3e-05
Identities = 41/133 (30%), Positives = 55/133 (41%), Gaps = 7/133 (5%)
Query: 15 HGRSVLESYVRNKHS-DHSRSVLESYMSYKHSDPHSSVLESYVREKHSEHSRSALESYVR 73
H RS S + S +SRS + S + SS SY + S SRS SY
Sbjct: 1336 HSRSRSRSSTSSYRSRSYSRSRSRGWYSRGRTRSRSSSYRSYKSHRTSSRSRSRSSSY-- 1393
Query: 74 DKHSEPRNIVLETYVRDRHLDPRSSVLESHVRVKHSDPRSSVLEFYVSDKHSDSSSSVLY 133
D HS R+ ++Y RS +S+ R + + RS Y SD SD S Y
Sbjct: 1394 DPHSRSRSYTYDSYYSRSRSRSRSQRSDSYHRGRSYNRRSRSCRSYGSDSESDRS----Y 1449
Query: 134 SYEKDKHSESRSS 146
S+ + SR S
Sbjct: 1450 SHHRSPSESSRYS 1462
Score = 38.5 bits (88), Expect = 0.003
Identities = 46/144 (31%), Positives = 60/144 (41%), Gaps = 25/144 (17%)
Query: 6 SYVRDKH--SDHGRS---VLESYVRNKHSDHSR-SVLESYMSYKHSDPHSSVLESYVREK 59
SY R + S H RS S+ RNK+SDHS+ S SY S D R K
Sbjct: 705 SYTRSRSLASSHSRSRSPSSRSHSRNKYSDHSQCSRSSSYTSISSDDGR--------RAK 756
Query: 60 HSEHSRSALESYVRDKHSEPRNIVLET-YVRDRHLDPRSSVLESHVRVKHSDPRSSVLEF 118
S S KHS L + YV+ R RSS + K+S+ RSS+
Sbjct: 757 RRLRSSGKKNSVSHKKHSSSSEKTLHSKYVKGR---DRSSCVR-----KYSESRSSL--D 806
Query: 119 YVSDKHSDSSSSVLYSYEKDKHSE 142
Y SD S + + EK+K +
Sbjct: 807 YSSDSEQSSVQATQSAQEKEKQGQ 830
Score = 37.0 bits (84), Expect = 0.009
Identities = 50/161 (31%), Positives = 59/161 (36%), Gaps = 21/161 (13%)
Query: 14 DHGRSVLESYVRNKHSDHSRSVLESYMSYKHSDPHSSVLESYVREKHSEHSRSALESYVR 73
D +S S R+K SR S +SY HS S S R + SRS R
Sbjct: 1307 DDSQSRSPSRSRSKSETKSRHRTRS-VSYSHSRSRSRSSTSSYRSRSYSRSRS------R 1359
Query: 74 DKHSEPRNIVLETYVRDRHLDPRSSVLESHVRVKHSDPRSSVLEFYVSDKHSDSSSSVLY 133
+S R R R RS +SH S RSS D HS S S
Sbjct: 1360 GWYSRGRT-------RSRSSSYRS--YKSHRTSSRSRSRSSSY-----DPHSRSRSYTYD 1405
Query: 134 SYEKDKHSESRSSVLKSYVKGKHTDPSINVLESYVRDIHSD 174
SY S SRS SY +G+ + SY D SD
Sbjct: 1406 SYYSRSRSRSRSQRSDSYHRGRSYNRRSRSCRSYGSDSESD 1446
Score = 28.5 bits (62), Expect = 3.3
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 16/87 (18%)
Query: 103 HVRVKHSDPRSSVLEFYVSDKHSDSS------SSVLYSYEKD---------KHSESRSSV 147
H R K+S+ S Y SD+ S+SS SS SY + HS SRS
Sbjct: 665 HKREKNSESDQSTYSKY-SDRSSESSPRSRSRSSRSRSYSRSYTRSRSLASSHSRSRSPS 723
Query: 148 LKSYVKGKHTDPSINVLESYVRDIHSD 174
+S+ + K++D S S I SD
Sbjct: 724 SRSHSRNKYSDHSQCSRSSSYTSISSD 750
Score = 28.1 bits (61), Expect = 4.4
Identities = 40/153 (26%), Positives = 53/153 (34%), Gaps = 11/153 (7%)
Query: 25 RNKHSDHSRSVLESYMSYKHSDPHSSVLESYVREKHSEHSRSALESYVRDKHSEPRNIVL 84
RN+ S + P S +S + +H S S S R + S
Sbjct: 1292 RNQESSSDEQTPSRDDDSQSRSPSRSRSKSETKSRHRTRSVSYSHSRSRSRSST------ 1345
Query: 85 ETYVRDRHLDPRSSVLESHVRVKHSDPRSSVLEFYVSDKHSDSSSSVLYSYEKDKHSESR 144
+Y + RS S R + RSS Y S + S S S SY D HS SR
Sbjct: 1346 SSYRSRSYSRSRSRGWYSRGRTRS---RSSSYRSYKSHRTSSRSRSRSSSY--DPHSRSR 1400
Query: 145 SSVLKSYVKGKHTDPSINVLESYVRDIHSDPRS 177
S SY + +SY R + RS
Sbjct: 1401 SYTYDSYYSRSRSRSRSQRSDSYHRGRSYNRRS 1433
Score = 27.3 bits (59), Expect = 7.4
Identities = 21/73 (28%), Positives = 28/73 (38%), Gaps = 2/73 (2%)
Query: 6 SYVRDKHSDHGRSVLESYVRNKHSDHSRSVLESYMSYKHSDPHSSVLESYVREKHSEHSR 65
SY + S RS SY + HS +SY S S S +SY R +
Sbjct: 1376 SYKSHRTSSRSRSRSSSY--DPHSRSRSYTYDSYYSRSRSRSRSQRSDSYHRGRSYNRRS 1433
Query: 66 SALESYVRDKHSE 78
+ SY D S+
Sbjct: 1434 RSCRSYGSDSESD 1446
>gi|108860697 zinc finger protein 592 [Homo sapiens]
Length = 1267
Score = 33.1 bits (74), Expect = 0.14
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 37 ESYMSYKHSDPHSSVLESYVREK--HSEHSRSALESYVRDKHSEPRNIVLETY-VRDRHL 93
ESY+S+ H L+ Y + S H+ ++L ++R+ H + Y D
Sbjct: 996 ESYVSHMKKS-HGRTLKRYPCRQCEQSFHTPNSLRKHIRNNHDTVKKFYTCGYCTEDSPS 1054
Query: 94 DPRSSVLESHVRVKH 108
PR S+LESH+ + H
Sbjct: 1055 FPRPSLLESHISLMH 1069
>gi|229892308 shugoshin-like 2 isoform 2 [Homo sapiens]
Length = 1260
Score = 32.0 bits (71), Expect = 0.30
Identities = 37/158 (23%), Positives = 66/158 (41%), Gaps = 11/158 (6%)
Query: 4 LESYVRDKHSDHGRSVLESYVRNKHSDHSRSVLESYMSYKHSDPHSSVLESYVREKHSEH 63
L+ YV D+ S + +RNK + + + E Y+ +D + V ESY ++ +
Sbjct: 886 LKKYVTDRKSAEQNESKINKLRNKVNWKTEIISEMNQIYEDNDKDAHVQESYTKDLDFKV 945
Query: 64 SRSALESYVRDKHSEPRNIVLETY--VRDRHLDPRSSVLESHVRVKHSDPRSSVLEFYVS 121
++S + E ++I+ + Y V + +L+S+ VK SS +
Sbjct: 946 NKS-------KQKLECQDIINKHYMEVNSNEKESCDQILDSYKVVKKRKKESSCKAKNIL 998
Query: 122 DKHSDSSSSVLYSYEKDKHSESRSSVLKSYVKGKHTDP 159
K + +S L E + S S S LK +DP
Sbjct: 999 TKAKNKLASQL--TESSQTSISLESDLKHITSEADSDP 1034
>gi|229892306 shugoshin-like 2 isoform 1 [Homo sapiens]
Length = 1265
Score = 32.0 bits (71), Expect = 0.30
Identities = 37/158 (23%), Positives = 66/158 (41%), Gaps = 11/158 (6%)
Query: 4 LESYVRDKHSDHGRSVLESYVRNKHSDHSRSVLESYMSYKHSDPHSSVLESYVREKHSEH 63
L+ YV D+ S + +RNK + + + E Y+ +D + V ESY ++ +
Sbjct: 886 LKKYVTDRKSAEQNESKINKLRNKVNWKTEIISEMNQIYEDNDKDAHVQESYTKDLDFKV 945
Query: 64 SRSALESYVRDKHSEPRNIVLETY--VRDRHLDPRSSVLESHVRVKHSDPRSSVLEFYVS 121
++S + E ++I+ + Y V + +L+S+ VK SS +
Sbjct: 946 NKS-------KQKLECQDIINKHYMEVNSNEKESCDQILDSYKVVKKRKKESSCKAKNIL 998
Query: 122 DKHSDSSSSVLYSYEKDKHSESRSSVLKSYVKGKHTDP 159
K + +S L E + S S S LK +DP
Sbjct: 999 TKAKNKLASQL--TESSQTSISLESDLKHITSEADSDP 1034
>gi|229892197 shugoshin-like 2 isoform 3 [Homo sapiens]
Length = 1261
Score = 32.0 bits (71), Expect = 0.30
Identities = 37/158 (23%), Positives = 66/158 (41%), Gaps = 11/158 (6%)
Query: 4 LESYVRDKHSDHGRSVLESYVRNKHSDHSRSVLESYMSYKHSDPHSSVLESYVREKHSEH 63
L+ YV D+ S + +RNK + + + E Y+ +D + V ESY ++ +
Sbjct: 886 LKKYVTDRKSAEQNESKINKLRNKVNWKTEIISEMNQIYEDNDKDAHVQESYTKDLDFKV 945
Query: 64 SRSALESYVRDKHSEPRNIVLETY--VRDRHLDPRSSVLESHVRVKHSDPRSSVLEFYVS 121
++S + E ++I+ + Y V + +L+S+ VK SS +
Sbjct: 946 NKS-------KQKLECQDIINKHYMEVNSNEKESCDQILDSYKVVKKRKKESSCKAKNIL 998
Query: 122 DKHSDSSSSVLYSYEKDKHSESRSSVLKSYVKGKHTDP 159
K + +S L E + S S S LK +DP
Sbjct: 999 TKAKNKLASQL--TESSQTSISLESDLKHITSEADSDP 1034
>gi|225579067 solute carrier family 12, member 4 isoform e [Homo
sapiens]
Length = 1054
Score = 32.0 bits (71), Expect = 0.30
Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 10/120 (8%)
Query: 63 HSRSALESYVRDKHSEPRNIVLETYVRDRHLDPRSSVLESHVRVKHSDPRSSVLEFYVSD 122
H R E V + H+ +I TY R ++ RS +L K R + L V D
Sbjct: 870 HLRLEAEVEVVEMHNS--DISAYTYERTLMMEQRSQMLRQMRLTKTEREREAQL---VKD 924
Query: 123 KHSDSSSSVLYSYEKDKHSESRSSVLKSYVKGKHT----DPSINVLESYVRDIHSDPRSS 178
+HS LYS E+D+ + + ++ + K+ DPS + +++ +H P S
Sbjct: 925 RHSALRLESLYSDEEDESAVGADKIQMTWTRDKYMTETWDPS-HAPDNFRELVHIKPDQS 983
>gi|225579065 solute carrier family 12, member 4 isoform d [Homo
sapiens]
Length = 1079
Score = 32.0 bits (71), Expect = 0.30
Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 10/120 (8%)
Query: 63 HSRSALESYVRDKHSEPRNIVLETYVRDRHLDPRSSVLESHVRVKHSDPRSSVLEFYVSD 122
H R E V + H+ +I TY R ++ RS +L K R + L V D
Sbjct: 895 HLRLEAEVEVVEMHNS--DISAYTYERTLMMEQRSQMLRQMRLTKTEREREAQL---VKD 949
Query: 123 KHSDSSSSVLYSYEKDKHSESRSSVLKSYVKGKHT----DPSINVLESYVRDIHSDPRSS 178
+HS LYS E+D+ + + ++ + K+ DPS + +++ +H P S
Sbjct: 950 RHSALRLESLYSDEEDESAVGADKIQMTWTRDKYMTETWDPS-HAPDNFRELVHIKPDQS 1008
>gi|225579063 solute carrier family 12, member 4 isoform c [Homo
sapiens]
Length = 1087
Score = 32.0 bits (71), Expect = 0.30
Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 10/120 (8%)
Query: 63 HSRSALESYVRDKHSEPRNIVLETYVRDRHLDPRSSVLESHVRVKHSDPRSSVLEFYVSD 122
H R E V + H+ +I TY R ++ RS +L K R + L V D
Sbjct: 903 HLRLEAEVEVVEMHNS--DISAYTYERTLMMEQRSQMLRQMRLTKTEREREAQL---VKD 957
Query: 123 KHSDSSSSVLYSYEKDKHSESRSSVLKSYVKGKHT----DPSINVLESYVRDIHSDPRSS 178
+HS LYS E+D+ + + ++ + K+ DPS + +++ +H P S
Sbjct: 958 RHSALRLESLYSDEEDESAVGADKIQMTWTRDKYMTETWDPS-HAPDNFRELVHIKPDQS 1016
>gi|4827006 solute carrier family 12, member 4 isoform a [Homo
sapiens]
Length = 1085
Score = 32.0 bits (71), Expect = 0.30
Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 10/120 (8%)
Query: 63 HSRSALESYVRDKHSEPRNIVLETYVRDRHLDPRSSVLESHVRVKHSDPRSSVLEFYVSD 122
H R E V + H+ +I TY R ++ RS +L K R + L V D
Sbjct: 901 HLRLEAEVEVVEMHNS--DISAYTYERTLMMEQRSQMLRQMRLTKTEREREAQL---VKD 955
Query: 123 KHSDSSSSVLYSYEKDKHSESRSSVLKSYVKGKHT----DPSINVLESYVRDIHSDPRSS 178
+HS LYS E+D+ + + ++ + K+ DPS + +++ +H P S
Sbjct: 956 RHSALRLESLYSDEEDESAVGADKIQMTWTRDKYMTETWDPS-HAPDNFRELVHIKPDQS 1014
>gi|52426743 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 32.0 bits (71), Expect = 0.30
Identities = 34/133 (25%), Positives = 46/133 (34%), Gaps = 19/133 (14%)
Query: 26 NKHSDHSRSVLESYMSYKHSDPHSSVLESYVREKHSEHSRSALESYVRDKHSEPRNIVLE 85
++ DH RS + D S KH SR S RD+ S
Sbjct: 309 SRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKH----R 364
Query: 86 TYVRDRHLDPRSSVLESHVRVKHSDPRSSVLEFYVSDKHSDSSSSVLYSYEKDKHSESRS 145
+ RDR D +S K + R S DK S S +D ++ES+
Sbjct: 365 SKSRDREQDRKS---------KEKEKRGS------DDKKSSVKSGSREKQSEDTNTESKE 409
Query: 146 SVLKSYVKGKHTD 158
S K+ V G D
Sbjct: 410 SDTKNEVNGTSED 422
Score = 29.3 bits (64), Expect = 2.0
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 9 RDKHSDHGRSVLESYVRNKHSDHSRSVLESYMSYKH---SDPHSSVLESYVREKH-SEHS 64
RD+ E R++ D RS SYKH S +S +EK S+
Sbjct: 328 RDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEKEKRGSDDK 387
Query: 65 RSALESYVRDKHSEPRN 81
+S+++S R+K SE N
Sbjct: 388 KSSVKSGSREKQSEDTN 404
>gi|19923485 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 32.0 bits (71), Expect = 0.30
Identities = 34/133 (25%), Positives = 46/133 (34%), Gaps = 19/133 (14%)
Query: 26 NKHSDHSRSVLESYMSYKHSDPHSSVLESYVREKHSEHSRSALESYVRDKHSEPRNIVLE 85
++ DH RS + D S KH SR S RD+ S
Sbjct: 309 SRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKH----R 364
Query: 86 TYVRDRHLDPRSSVLESHVRVKHSDPRSSVLEFYVSDKHSDSSSSVLYSYEKDKHSESRS 145
+ RDR D +S K + R S DK S S +D ++ES+
Sbjct: 365 SKSRDREQDRKS---------KEKEKRGS------DDKKSSVKSGSREKQSEDTNTESKE 409
Query: 146 SVLKSYVKGKHTD 158
S K+ V G D
Sbjct: 410 SDTKNEVNGTSED 422
Score = 29.3 bits (64), Expect = 2.0
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 9 RDKHSDHGRSVLESYVRNKHSDHSRSVLESYMSYKH---SDPHSSVLESYVREKH-SEHS 64
RD+ E R++ D RS SYKH S +S +EK S+
Sbjct: 328 RDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEKEKRGSDDK 387
Query: 65 RSALESYVRDKHSEPRN 81
+S+++S R+K SE N
Sbjct: 388 KSSVKSGSREKQSEDTN 404
>gi|109255228 centrosomal protein 170kDa isoform alpha [Homo
sapiens]
Length = 1584
Score = 32.0 bits (71), Expect = 0.30
Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 7/121 (5%)
Query: 26 NKHSDHSRSVLESYMSYKHSDPHSSVLESYVREKHSEHSRSALESYVRDKHSEPRNIVLE 85
NKH D ++S E+ +++ ++ LE ++R HSEH + L+ + + + +
Sbjct: 371 NKHDDGTQSDSENAGAHRRCSKRAT-LEEHLRRHHSEHKK--LQKVQATEKHQDQAVTSS 427
Query: 86 TYVRDRHLDPRSSVLESHVRVKHSDPRSSVLEFYVSDKHSDSSSSVLYSYEKDKHSESRS 145
+ R H P +L+ K +P S+ + S S S E DK ++++
Sbjct: 428 AHHRGGHGVPHGKLLKQ----KSEEPSVSIPFLQTALLRSSGSLGHRPSQEMDKMLKNQA 483
Query: 146 S 146
+
Sbjct: 484 T 484
>gi|155030185 hypothetical protein LOC55726 [Homo sapiens]
Length = 706
Score = 30.4 bits (67), Expect = 0.88
Identities = 29/129 (22%), Positives = 52/129 (40%), Gaps = 7/129 (5%)
Query: 45 SDPHSSVLESYVREKHSEHSRSALESYVRDKHSEPRNIVLETY-------VRDRHLDPRS 97
SD H +LE V+E EH++ A S + + +++ TY V DR S
Sbjct: 168 SDSHVRMLEDCVQETIHEHNKLAANSDHLMQIQKCELVLIHTYPVGEDSLVSDRSKKELS 227
Query: 98 SVLESHVRVKHSDPRSSVLEFYVSDKHSDSSSSVLYSYEKDKHSESRSSVLKSYVKGKHT 157
VL S V + + + +H D +S+ + + + + +S H
Sbjct: 228 PVLTSEVHSVRAGRHLATKLNILVQQHFDLASTTITNIPMKEEQHANTSANYDVELLHHK 287
Query: 158 DPSINVLES 166
D ++ L+S
Sbjct: 288 DAHVDFLKS 296
>gi|56676397 ankyrin repeat domain 11 [Homo sapiens]
Length = 2663
Score = 30.0 bits (66), Expect = 1.1
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Query: 21 ESYVRNKHSDHSRSVLESYMSYKHSDPHSSVLESYVREKHSEHSRSALESYVRDKHSEPR 80
E R KH + R E +H D H+ L + R++ H R + RDK S PR
Sbjct: 1458 EKKKREKHREKWRDEKE-----RHRDRHADGLLRHHRDELLRHHRDEQKPATRDKDSPPR 1512
Query: 81 NIVLETYVRD 90
VL+ RD
Sbjct: 1513 --VLKDKSRD 1520
Score = 27.7 bits (60), Expect = 5.7
Identities = 36/157 (22%), Positives = 57/157 (36%), Gaps = 22/157 (14%)
Query: 9 RDKHSDHGRS---VLESYVRNKHSDHSRSVLESYMSYKHSDPHSSVLESYVR-EKHSEHS 64
++K SD +S +LE ++K D + KH D H E ++ E
Sbjct: 1029 KEKSSDKDKSEKSILEKCQKDKEFDKCFKEKKDTKE-KHKDTHGKDKERKASLDQGKEKK 1087
Query: 65 RSALESYVR--------DKHSEPRNIVLETYVRDRHLDPRSSVLESHVRVKHSD--PRSS 114
A + DK + ++ + D D R S + S ++ + PR+
Sbjct: 1088 EKAFPGIISEDFSEKKDDKKGKEKSWYIADIFTDESEDDRDSCMGSGFKMGEASDLPRTD 1147
Query: 115 VL-------EFYVSDKHSDSSSSVLYSYEKDKHSESR 144
L E Y SD+H SS +KDK R
Sbjct: 1148 GLQEKEEGREAYASDRHRKSSDKQHPERQKDKEPRDR 1184
Score = 26.9 bits (58), Expect = 9.7
Identities = 25/108 (23%), Positives = 41/108 (37%), Gaps = 4/108 (3%)
Query: 53 ESYVREKHSEHSRSALESYVRDKHSEPRNIVLETYVRDRHLDPRSSVLESHVRVKHSDPR 112
E+Y ++H + S + R K EPR+ + D D + V E H K D
Sbjct: 1157 EAYASDRHRKSSDK--QHPERQKDKEPRDRRKDRGAADAGRDKKEKVFEKHKEKK--DKE 1212
Query: 113 SSVLEFYVSDKHSDSSSSVLYSYEKDKHSESRSSVLKSYVKGKHTDPS 160
S+ D+ S S+ + +K + + K KH + S
Sbjct: 1213 STEKYKDRKDRASVDSTQDKKNKQKLPEKAEKKHAAEDKAKSKHKEKS 1260
>gi|17978469 cyclin T2 isoform b [Homo sapiens]
Length = 730
Score = 30.0 bits (66), Expect = 1.1
Identities = 38/169 (22%), Positives = 58/169 (34%), Gaps = 16/169 (9%)
Query: 5 ESYVRDKHSDHGRSVLESYVRNKHSDHSRSVLESYMSYKHSDPHSSVLESYVREKHSEHS 64
E Y+ DK G L + S+ L+ + S+ HSS E + KHS
Sbjct: 492 EKYMADKKEKSGSLKLRIPIPPTDKSASKEELKMKIKVSSSERHSSSDEGSGKSKHSSPH 551
Query: 65 RSALESYVRDKHSEPRNIVLETYVRDRHLDPRS------------SVLESHVRVK----H 108
S +H R+ H S +VL S V +
Sbjct: 552 ISRDHKEKHKEHPSSRHHTSSHKHSHSHSGSSSGGSKHSADGIPPTVLRSPVGLSSDGIS 611
Query: 109 SDPRSSVLEFYVSDKHSDSSSSVLYSYEKDKHSESRSSVLKSYVKGKHT 157
S SS +V+D + S + S + S S SS +K Y+ ++
Sbjct: 612 SSSSSSRKRLHVNDASHNHHSKMSKSSKSSGSSSSSSSSVKQYISSHNS 660
>gi|225579061 solute carrier family 12, member 4 isoform b [Homo
sapiens]
Length = 1079
Score = 29.6 bits (65), Expect = 1.5
Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 8/97 (8%)
Query: 86 TYVRDRHLDPRSSVLESHVRVKHSDPRSSVLEFYVSDKHSDSSSSVLYSYEKDKHSESRS 145
TY R ++ RS +L K R + L V D+HS LYS E+D+ +
Sbjct: 916 TYERTLMMEQRSQMLRQMRLTKTEREREAQL---VKDRHSALRLESLYSDEEDESAVGAD 972
Query: 146 SVLKSYVKGKHT----DPSINVLESYVRDIHSDPRSS 178
+ ++ + K+ DPS + +++ +H P S
Sbjct: 973 KIQMTWTRDKYMTETWDPS-HAPDNFRELVHIKPDQS 1008
>gi|87196343 PDZ domain containing 2 [Homo sapiens]
Length = 2839
Score = 29.6 bits (65), Expect = 1.5
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 114 SVLEFYVSDKHSDSSSSVLYSYEKDKHSESRSSVLKSYVKGKHTDPSINVLESYVRDIHS 173
SVL+ DKH + + L +Y ++ S S S + G T+PS++ + D S
Sbjct: 1502 SVLDSINPDKHFTVNKNFLSNYSRNFSSFHEDSTSLSGL-GDSTEPSLSSMYGDAEDSSS 1560
Query: 174 DPRS 177
DP S
Sbjct: 1561 DPES 1564
>gi|40805104 topoisomerase I binding, arginine/serine-rich [Homo
sapiens]
Length = 1045
Score = 29.3 bits (64), Expect = 2.0
Identities = 44/190 (23%), Positives = 74/190 (38%), Gaps = 41/190 (21%)
Query: 7 YVRDKHSDHGRSVLESYVRNKHSD------HSRSVLESYMSYKHSDP------------- 47
Y+R+ + + Y RNK D R++ ++ S + S P
Sbjct: 691 YLRNNYGSRYKWEYTYYSRNKDRDGYESSYRRRTLSRAHYSRQSSSPEFRVQSFSERTNA 750
Query: 48 ----HSSVLESYVREKH------SEHSRSALESYVRDKHSEPRNIVLETYVRDRHLDPRS 97
+ S + Y E+H S SR+A R ++ +P + + RHL+ +
Sbjct: 751 RKKNNHSERKYYYYERHRSRSLSSNRSRTASTGTDRVRNEKPGG---KRKYKTRHLEGTN 807
Query: 98 SVLE------SHVRVKHSDPRSSVLEFYV---SDKHSDSSSSVLYSYEKDKHSESRSSVL 148
V + S + H SS L+ SD SDS SS + K + ++RS +
Sbjct: 808 EVAQPSREFASKAKDSHYQKSSSKLDGNYKNESDTFSDSRSSDRETKHKRRKRKTRSLSV 867
Query: 149 KSYVKGKHTD 158
+ +GK TD
Sbjct: 868 EIVYEGKATD 877
>gi|9558733 transformer-2 alpha [Homo sapiens]
Length = 282
Score = 28.9 bits (63), Expect = 2.6
Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Query: 11 KHSD-HGRSVLESYVRNKHSDHSRSVLESYMSYKHSDPHSSVLESYVREKHSEHSRSALE 69
KHS+ H RS +S R++ H R S+ HS S SY E SRS
Sbjct: 44 KHSESHSRSRSKSRSRSRRHSHRRYTRSR--SHSHSHRRRSRSRSYTPEYRRRRSRSHSP 101
Query: 70 SYVRDKHSEPR 80
R +H+ R
Sbjct: 102 MSNRRRHTGSR 112
>gi|8922633 high-mobility group 20A [Homo sapiens]
Length = 347
Score = 28.9 bits (63), Expect = 2.6
Identities = 22/99 (22%), Positives = 43/99 (43%), Gaps = 5/99 (5%)
Query: 76 HSEPRNIVLETYVRDR-HLDPRSSVLESHVRVKHSDPRSSVLEFYVSDKHSDSSSSVLYS 134
HS+ R L + + R++ L+ HV R++V + V S ++VL
Sbjct: 228 HSKAREAELRQLRKSNMEFEERNAALQKHVE----SMRTAVEKLEVDVIQERSRNTVLQQ 283
Query: 135 YEKDKHSESRSSVLKSYVKGKHTDPSINVLESYVRDIHS 173
+ + SS + G P+++ ++SY+ +HS
Sbjct: 284 HLETLRQVLTSSFASMPLPGSGETPTVDTIDSYMNRLHS 322
>gi|151301228 formin binding protein 3 [Homo sapiens]
Length = 930
Score = 28.9 bits (63), Expect = 2.6
Identities = 30/125 (24%), Positives = 43/125 (34%), Gaps = 4/125 (3%)
Query: 35 VLESYMSYKHSDPHSSVLESYVREKHSEHSRSALESYVRDKHSEPRNIVLETYVRDRHLD 94
VLE + HS +S + SRS +S D HS+ + E+ H
Sbjct: 772 VLEHECQHHHSKNKKHSKKSKKHHRKRSRSRSGSDSDDDDSHSKKKRQRSESRSASEH-- 829
Query: 95 PRSSVLESHVRVKHSDPRSSVLEFYVSDKHSDSSSSVLYSYEKDKHSESRSSVLKSYVKG 154
SS ES K S + S S + +K+K ES + +
Sbjct: 830 --SSSAESERSYKKSKKHKKKSKKRRHKSDSPESDAEREKDKKEKDRESEKDRTRQRSES 887
Query: 155 KHTDP 159
KH P
Sbjct: 888 KHKSP 892
Score = 27.7 bits (60), Expect = 5.7
Identities = 23/87 (26%), Positives = 32/87 (36%), Gaps = 4/87 (4%)
Query: 10 DKHSDHGRSVLESYVRNKHSDHSRSVLESYMSYKHSDPHSSVLESYVREKHSEHSRSALE 69
D HS R ES ++HS S ES SYK S H + + S S + E
Sbjct: 811 DSHSKKKRQRSESRSASEHS----SSAESERSYKKSKKHKKKSKKRRHKSDSPESDAERE 866
Query: 70 SYVRDKHSEPRNIVLETYVRDRHLDPR 96
++K E +H P+
Sbjct: 867 KDKKEKDRESEKDRTRQRSESKHKSPK 893
>gi|7524365 paired box 8 isoform PAX8D [Homo sapiens]
Length = 321
Score = 28.5 bits (62), Expect = 3.3
Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
Query: 35 VLESYMSYKHSDP-------HSSVLESYVREKHSEHSRSALESYVRDKHSEPRNIVLETY 87
V+E YK +P +L V + + S S++ +R K +P N+ +++
Sbjct: 88 VVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVPSVSSINRIIRTKVQQPFNLPMDSC 147
Query: 88 VRDRHLDPRSSVLESHVRVKHSDPRSSVL 116
V + L P +++ S P+S L
Sbjct: 148 VATKSLSPGHTLIPSSAVTPPESPQSDSL 176
>gi|239749012 PREDICTED: hypothetical protein XP_002346880 [Homo
sapiens]
Length = 414
Score = 28.5 bits (62), Expect = 3.3
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 76 HSEPRNIVLETYVRDRHLDPRSSVLESHVRVKHSDPRSSVLEFYVSDKHSDSS-SSVLYS 134
H PR +E +R + + L+ +V K S P +V ++DKHSD S
Sbjct: 163 HFCPRRSKVECLNFERTIIRPTLYLQVYVLKKSSSPIRTVFAQLLADKHSDPDVSREDEQ 222
Query: 135 YEKDKHSESRSSVLKS 150
+ D + +S +LKS
Sbjct: 223 SDPDVSQDDKSQILKS 238
>gi|7669542 paired box 8 isoform PAX8E [Homo sapiens]
Length = 287
Score = 28.5 bits (62), Expect = 3.3
Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
Query: 35 VLESYMSYKHSDP-------HSSVLESYVREKHSEHSRSALESYVRDKHSEPRNIVLETY 87
V+E YK +P +L V + + S S++ +R K +P N+ +++
Sbjct: 88 VVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVPSVSSINRIIRTKVQQPFNLPMDSC 147
Query: 88 VRDRHLDPRSSVLESHVRVKHSDPRSSVL 116
V + L P +++ S P+S L
Sbjct: 148 VATKSLSPGHTLIPSSAVTPPESPQSDSL 176
>gi|7524363 paired box 8 isoform PAX8C [Homo sapiens]
Length = 398
Score = 28.5 bits (62), Expect = 3.3
Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
Query: 35 VLESYMSYKHSDP-------HSSVLESYVREKHSEHSRSALESYVRDKHSEPRNIVLETY 87
V+E YK +P +L V + + S S++ +R K +P N+ +++
Sbjct: 88 VVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVPSVSSINRIIRTKVQQPFNLPMDSC 147
Query: 88 VRDRHLDPRSSVLESHVRVKHSDPRSSVL 116
V + L P +++ S P+S L
Sbjct: 148 VATKSLSPGHTLIPSSAVTPPESPQSDSL 176
>gi|7524361 paired box 8 isoform PAX8B [Homo sapiens]
Length = 387
Score = 28.5 bits (62), Expect = 3.3
Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
Query: 35 VLESYMSYKHSDP-------HSSVLESYVREKHSEHSRSALESYVRDKHSEPRNIVLETY 87
V+E YK +P +L V + + S S++ +R K +P N+ +++
Sbjct: 88 VVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVPSVSSINRIIRTKVQQPFNLPMDSC 147
Query: 88 VRDRHLDPRSSVLESHVRVKHSDPRSSVL 116
V + L P +++ S P+S L
Sbjct: 148 VATKSLSPGHTLIPSSAVTPPESPQSDSL 176
>gi|5803117 paired box 8 isoform PAX8A [Homo sapiens]
Length = 450
Score = 28.5 bits (62), Expect = 3.3
Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
Query: 35 VLESYMSYKHSDP-------HSSVLESYVREKHSEHSRSALESYVRDKHSEPRNIVLETY 87
V+E YK +P +L V + + S S++ +R K +P N+ +++
Sbjct: 88 VVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVPSVSSINRIIRTKVQQPFNLPMDSC 147
Query: 88 VRDRHLDPRSSVLESHVRVKHSDPRSSVL 116
V + L P +++ S P+S L
Sbjct: 148 VATKSLSPGHTLIPSSAVTPPESPQSDSL 176
>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 28.5 bits (62), Expect = 3.3
Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 16/133 (12%)
Query: 10 DKHSDHGRSVLESYVRNKHSDHSRS--VLESYMSYKHSD--PHSSV-------LESYVRE 58
++ H SV+ + DH E + K + PHS + ++S +E
Sbjct: 1375 EEQPSHDTSVVSEQMAGSEDDHEEDSHTKEELIELKEEEEIPHSELDLETVQAVQSLTQE 1434
Query: 59 KHSEHSRSALESYVRDKHSEPRNIVLETYVRDRHLDPRSSVLESHVRVKHSDPRSSVLEF 118
+ SEH + Y + + L++Y + DP+ S++E +H+ P SSV
Sbjct: 1435 ESSEHEGA----YQDCEETLAACQTLQSYTQADE-DPQMSMVEDCHASEHNSPISSVQSH 1489
Query: 119 YVSDKHSDSSSSV 131
S SS +V
Sbjct: 1490 PSQSVRSVSSPNV 1502
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.123 0.336
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,633,817
Number of Sequences: 37866
Number of extensions: 263724
Number of successful extensions: 981
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 853
Number of HSP's gapped (non-prelim): 128
length of query: 182
length of database: 18,247,518
effective HSP length: 96
effective length of query: 86
effective length of database: 14,612,382
effective search space: 1256664852
effective search space used: 1256664852
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.